AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0425710

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0425710 MtrunA17_Chr3g0127861 97.406 424 11 0 1 424 1 424 0.0 862
Msa0425710 MtrunA17_Chr1g0189151 53.976 415 156 5 10 424 15 394 3.68e-162 462
Msa0425710 MtrunA17_Chr5g0395041 43.659 410 217 6 17 417 30 434 3.78e-114 341
Msa0425710 MtrunA17_Chr4g0000091 31.208 298 175 9 115 396 68 351 1.46e-36 137
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0425710 AT1G64720.1 58.234 419 123 8 8 424 16 384 1.44e-169 481
Msa0425710 AT5G54170.1 53.477 417 169 8 20 416 16 427 4.36e-146 423
Msa0425710 AT4G14500.1 47.044 406 206 3 17 417 30 431 6.61e-128 376
Msa0425710 AT3G23080.1 45.567 406 202 5 17 417 26 417 4.74e-118 351
Msa0425710 AT3G23080.2 46.000 400 197 5 23 417 1 386 1.71e-117 348
Msa0425710 AT3G23080.3 46.000 400 197 5 23 417 1 386 1.71e-117 348
Msa0425710 AT4G14500.2 44.167 240 127 3 17 249 30 269 1.59e-60 199
Msa0425710 AT3G13062.1 31.633 294 184 6 119 402 84 370 1.94e-39 146
Msa0425710 AT3G13062.2 31.633 294 184 6 119 402 84 370 2.98e-39 146
Msa0425710 AT1G55960.1 32.432 296 178 8 116 396 80 368 3.25e-37 140
Msa0425710 AT3G13062.3 30.795 302 184 7 119 402 84 378 1.11e-36 139
Msa0425710 AT1G55960.2 29.693 293 159 9 119 396 83 343 7.89e-26 108

Find 188 sgRNAs with CRISPR-Local

Find 266 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGAATAATAATTTGGAATT+TGG 0.087816 3_2:+76120243 None:intergenic
AAGATTTGGATTTGCTAATT+TGG 0.096001 3_2:-76117424 Msa0425710:CDS
TGAAGAGCCAATGAGTTATT+TGG 0.155566 3_2:+76120109 None:intergenic
ATGAGGTTTGAATAATAATT+TGG 0.162370 3_2:+76120236 None:intergenic
ACCACCACACACTTTATATT+TGG 0.165657 3_2:-76120144 Msa0425710:five_prime_UTR
CCTTGTGGAACTATCAAATT+TGG 0.183642 3_2:+76119334 None:intergenic
CAATGGAAAACCCTGCAATT+TGG 0.229635 3_2:-76119634 Msa0425710:CDS
ATCAATCTCTTGAAGGGATT+TGG 0.233935 3_2:-76117374 Msa0425710:three_prime_UTR
AAATAGTACTGCTTCGATAT+TGG 0.237005 3_2:+76118662 None:intergenic
CAATAAAGAGATCAATAAAA+AGG 0.238323 3_2:-76119378 Msa0425710:CDS
TCTTATCCATTGCACTTTCA+TGG 0.240540 3_2:+76118522 None:intergenic
ACATTATCGGGCGAAGAATA+TGG 0.249260 3_2:-76118361 Msa0425710:CDS
TTTGGTGTTGCTAAAAGATT+TGG 0.250029 3_2:-76117438 Msa0425710:CDS
AATGGAAAACCCTGCAATTT+GGG 0.252814 3_2:-76119633 Msa0425710:CDS
AAAGTCTCGGCTTGTTGATT+TGG 0.257188 3_2:-76117009 Msa0425710:three_prime_UTR
AGATGGTGAGGGATTTGTTC+TGG 0.264325 3_2:-76118621 Msa0425710:CDS
TAAACCAAAACCACTCTAAT+TGG 0.265319 3_2:-76120023 Msa0425710:five_prime_UTR
AGTTTATTTCACCCTCTTAA+AGG 0.266705 3_2:-76119679 Msa0425710:five_prime_UTR
CCCTCTTGAAGCCATTGTTT+TGG 0.269675 3_2:-76117139 Msa0425710:three_prime_UTR
ATGATCAATTCCGACCTAAA+TGG 0.274607 3_2:-76118597 Msa0425710:CDS
TGAACCAATTAGAGTGGTTT+TGG 0.278685 3_2:+76120019 None:intergenic
AGATTTGGATTTGCTAATTT+GGG 0.278788 3_2:-76117423 Msa0425710:CDS
ACTCTCTCGTTCCGCTTTCA+TGG 0.280943 3_2:-76117658 Msa0425710:CDS
GAGTTATTGTTGGTTGGTTA+TGG 0.284197 3_2:-76119559 Msa0425710:CDS
TGGTCCTAGGGAAAATTAAA+TGG 0.295109 3_2:+76120315 None:intergenic
AATAGTACTGCTTCGATATT+GGG 0.295359 3_2:+76118663 None:intergenic
GAAGAGCCAATGAGTTATTT+GGG 0.295858 3_2:+76120110 None:intergenic
GTGACCAAGGCTGTTATATT+TGG 0.297239 3_2:-76117456 Msa0425710:CDS
ATTTGAGGAGAAGAATAATT+AGG 0.297481 3_2:+76119808 None:intergenic
CTTTCTCATTCCCCTAGATT+TGG 0.311325 3_2:+76117028 None:intergenic
ACCGAAATGGATTGTTTCAT+TGG 0.320605 3_2:-76119534 Msa0425710:CDS
TTATTGATGCACAAAGAATC+AGG 0.325112 3_2:+76119395 None:intergenic
TATCAAGAAGCAAAAGCTTC+TGG 0.334002 3_2:-76117687 Msa0425710:CDS
AATATAGGAGAATCTGAAAT+TGG 0.334138 3_2:+76119488 None:intergenic
TAGGGAAAATTAAATGGAAA+TGG 0.334646 3_2:+76120321 None:intergenic
GCTCTTCCATCATGAAGAAA+TGG 0.335228 3_2:-76117793 Msa0425710:CDS
ACAAGCATATCATCCCATTT+AGG 0.342967 3_2:+76118583 None:intergenic
CAACCAATGTAATGCGCATT+TGG 0.348140 3_2:+76117324 None:intergenic
GCCAATGAAACAATCCATTT+CGG 0.348500 3_2:+76119533 None:intergenic
GCATTAAAACCCCAAATTGC+AGG 0.348790 3_2:+76119623 None:intergenic
AAGTCTCGGCTTGTTGATTT+GGG 0.349338 3_2:-76117008 Msa0425710:three_prime_UTR
CTTGGGAAATTGCAAAGCTT+GGG 0.351239 3_2:-76117764 Msa0425710:CDS
CTTGCTTGTAGTCTAGATAA+AGG 0.357837 3_2:-76117483 Msa0425710:CDS
TTCTTGATAAGCGCGTAAAC+CGG 0.360902 3_2:+76117701 None:intergenic
TTCTCTGTCTTTACAGAAGA+AGG 0.369154 3_2:+76118385 None:intergenic
TTTGTGTTGGAGAATTTGTT+TGG 0.371896 3_2:+76120060 None:intergenic
ACGGCGTTTGATTGTTTGCT+TGG 0.379599 3_2:+76120295 None:intergenic
CCTTGGGAAATTGCAAAGCT+TGG 0.380072 3_2:-76117765 Msa0425710:CDS
TTGATTGTTTGCTTGGTCCT+AGG 0.388399 3_2:+76120302 None:intergenic
ATGCACAAAGAATCAGGGTT+TGG 0.389553 3_2:+76119401 None:intergenic
TTCGGTACGGTCATGCCCTT+TGG 0.391532 3_2:+76117534 None:intergenic
GTCAGAAGTAATCGCACTTT+CGG 0.393685 3_2:+76117563 None:intergenic
GTTTATTTCACCCTCTTAAA+GGG 0.396971 3_2:-76119678 Msa0425710:five_prime_UTR
GAAGAAATGTGAATAGGAAT+AGG 0.398071 3_2:+76119988 None:intergenic
GTTGGTTATGGAAACCGAAA+TGG 0.409722 3_2:-76119547 Msa0425710:CDS
GTTGAATCAAAGAGAGATAA+TGG 0.410181 3_2:-76117840 Msa0425710:CDS
AAGGAGCTGTGGAATATTTG+AGG 0.414935 3_2:+76119793 None:intergenic
TATGAAGAAGAAATGTGAAT+AGG 0.417715 3_2:+76119982 None:intergenic
AATTTCAATGGCGAAAATAT+AGG 0.421810 3_2:+76119473 None:intergenic
AAGTTTCAAAACCCTTTAAG+AGG 0.424066 3_2:+76119667 None:intergenic
CGCATTACATTGGTTGATGT+TGG 0.425042 3_2:-76117317 Msa0425710:three_prime_UTR
CTCTTCCATCATGAAGAAAT+GGG 0.425947 3_2:-76117792 Msa0425710:CDS
TCTCGTTCCGCTTTCATGGC+CGG 0.427496 3_2:-76117654 Msa0425710:CDS
ATGAAGAAATGGGAATTCCT+TGG 0.434331 3_2:-76117782 Msa0425710:CDS
AGAAAGAAGATAAGAAGAAG+AGG 0.435078 3_2:+76119929 None:intergenic
AACAAATCCCTCACCATCTC+AGG 0.435785 3_2:+76118625 None:intergenic
GAAGGAAATTGAGGTATTAG+TGG 0.435878 3_2:+76120348 None:intergenic
CATTATCGGGCGAAGAATAT+GGG 0.439592 3_2:-76118360 Msa0425710:CDS
AAAGACAGAGAATACATTAT+CGG 0.440471 3_2:-76118374 Msa0425710:CDS
TGATCAATTCCGACCTAAAT+GGG 0.441777 3_2:-76118596 Msa0425710:CDS
TCTTAGGAGTTATTGTTGGT+TGG 0.448664 3_2:-76119565 Msa0425710:CDS
TCCGGTGAAGATACTTCTAA+TGG 0.456041 3_2:-76118917 Msa0425710:CDS
AGAAAGATGGAGGTCTTCCT+TGG 0.462865 3_2:-76118850 Msa0425710:CDS
AAACATTCACATGGTAAAGT+TGG 0.463882 3_2:-76116834 Msa0425710:three_prime_UTR
GATGGTGAGGGATTTGTTCT+GGG 0.463908 3_2:-76118620 Msa0425710:CDS
TGAAGAAATGGGAATTCCTT+GGG 0.464197 3_2:-76117781 Msa0425710:CDS
TGATTGTTTGCTTGGTCCTA+GGG 0.465087 3_2:+76120303 None:intergenic
AGGGAAAATTAAATGGAAAT+GGG 0.466993 3_2:+76120322 None:intergenic
GTTAGGTGTTGTGTTTGTGT+TGG 0.472614 3_2:+76120047 None:intergenic
TTGGTTCTCTACGCCATGCC+TGG 0.479368 3_2:+76118789 None:intergenic
ATGTGAATAGGAATAGGAAT+AGG 0.480041 3_2:+76119994 None:intergenic
CCACCAATGACTAGCATCTT+CGG 0.484556 3_2:+76117516 None:intergenic
GCAAAGCTTGGGGTGCGAAA+AGG 0.484622 3_2:-76117753 Msa0425710:CDS
GTTGATGTTGGATCAAGATC+GGG 0.486228 3_2:-76117305 Msa0425710:three_prime_UTR
CTATGCAGTTCTCAGAAATC+CGG 0.487042 3_2:-76118935 Msa0425710:intron
GAATTCCCATTTCTTCATGA+TGG 0.489686 3_2:+76117787 None:intergenic
AGATTCCCCAAATAACTCAT+TGG 0.490673 3_2:-76120116 Msa0425710:five_prime_UTR
GGTTGATGTTGGATCAAGAT+CGG 0.498351 3_2:-76117306 Msa0425710:three_prime_UTR
GGCGAAGAATATGGGAATGC+GGG 0.499090 3_2:-76118352 Msa0425710:CDS
CATCCAAATGCGCATTACAT+TGG 0.501466 3_2:-76117327 Msa0425710:three_prime_UTR
AAAGAAGAATAGAATTTCAA+TGG 0.502415 3_2:+76119461 None:intergenic
AGGTGGAATCAATCTCTTGA+AGG 0.504620 3_2:-76117381 Msa0425710:three_prime_UTR
AAGGGGTATGTGGTTGAAGA+AGG 0.505565 3_2:+76119774 None:intergenic
AATGCGTTCTGAGGAAACTA+AGG 0.505603 3_2:+76119739 None:intergenic
AAGACAGAGAATACATTATC+GGG 0.507509 3_2:-76118373 Msa0425710:CDS
TCTAGTTGGTGCATTCGAGC+AGG 0.509639 3_2:-76118127 Msa0425710:intron
AAGAGGGTGAAATAAACTAA+AGG 0.510097 3_2:+76119684 None:intergenic
AGAGGGTGAAATAAACTAAA+GGG 0.510899 3_2:+76119685 None:intergenic
TCCAAAACAATGGCTTCAAG+AGG 0.515874 3_2:+76117138 None:intergenic
TCTCTGTCTTTACAGAAGAA+GGG 0.516792 3_2:+76118386 None:intergenic
GCGAAAAGGCATGTGGGGAA+TGG 0.521022 3_2:-76117739 Msa0425710:CDS
TCTTCCTTGGATACAGATGA+TGG 0.524577 3_2:-76118837 Msa0425710:CDS
CCAAGCTTTGCAATTTCCCA+AGG 0.529721 3_2:+76117765 None:intergenic
GAGTTTGAAATTTAGACCAT+TGG 0.530093 3_2:-76117233 Msa0425710:three_prime_UTR
TCTTGATAAGCGCGTAAACC+GGG 0.530261 3_2:+76117702 None:intergenic
CTCTGTCTTTACAGAAGAAG+GGG 0.532991 3_2:+76118387 None:intergenic
GTAAAAGATAGTAGAACTAA+AGG 0.533449 3_2:-76117401 Msa0425710:exon
CATTAAAACCCCAAATTGCA+GGG 0.535660 3_2:+76119624 None:intergenic
TGATGTTGGAATTGAAAATG+AGG 0.539227 3_2:+76120219 None:intergenic
TTGGGGTGCGAAAAGGCATG+TGG 0.540671 3_2:-76117746 Msa0425710:CDS
GAAAGAAGATAAGAAGAAGA+GGG 0.540918 3_2:+76119930 None:intergenic
GAAAGTGCAATGGATAAGAA+AGG 0.543349 3_2:-76118518 Msa0425710:intron
TACCTTTGTGACGCAATAGT+AGG 0.544173 3_2:+76118325 None:intergenic
ACCATTAGAAGTATCTTCAC+CGG 0.545080 3_2:+76118916 None:intergenic
TTAAATGGAAATGGGAGTGA+AGG 0.546440 3_2:+76120330 None:intergenic
TGGGGTGCGAAAAGGCATGT+GGG 0.547657 3_2:-76117745 Msa0425710:CDS
AAGCTTGTTGAAGAGAAAGA+TGG 0.548875 3_2:-76118863 Msa0425710:CDS
GGTGGAATCAATCTCTTGAA+GGG 0.550268 3_2:-76117380 Msa0425710:three_prime_UTR
AAAGATAGTAGAACTAAAGG+TGG 0.551418 3_2:-76117398 Msa0425710:exon
ATGGTACAAAAGATTGAGCC+CGG 0.553382 3_2:-76117720 Msa0425710:CDS
AACACCAAATATAACAGCCT+TGG 0.555762 3_2:+76117452 None:intergenic
AATGGGAGTGAAGGAAATTG+AGG 0.558197 3_2:+76120339 None:intergenic
GTACCGAAGATGCTAGTCAT+TGG 0.562943 3_2:-76117519 Msa0425710:CDS
TTGGGAAATTGCAAAGCTTG+GGG 0.564589 3_2:-76117763 Msa0425710:CDS
TTGCACTTTCATGGTTCCAG+TGG 0.567434 3_2:+76118531 None:intergenic
TATTGATGCACAAAGAATCA+GGG 0.567482 3_2:+76119396 None:intergenic
ACTTTCATGGTTCCAGTGGT+AGG 0.569928 3_2:+76118535 None:intergenic
TTAGAAGAGTGTCCTACCAC+TGG 0.570104 3_2:-76118547 Msa0425710:CDS
AGTTTCAAAACCCTTTAAGA+GGG 0.570957 3_2:+76119668 None:intergenic
CACAGAGTTTATAAATTCTG+TGG 0.571669 3_2:+76116921 None:intergenic
TTTATTACTTCAAAATGTGG+AGG 0.572509 3_2:-76117086 Msa0425710:three_prime_UTR
TAGATGTGTATTACTCTAGT+TGG 0.573803 3_2:-76118141 Msa0425710:CDS
GCTTGTTGATTTGGGAGAGA+GGG 0.574652 3_2:-76117000 Msa0425710:three_prime_UTR
ATGCAACTCCTGAGATGGTG+AGG 0.574823 3_2:-76118633 Msa0425710:CDS
CCGATGGATTGCAAGTACTC+AGG 0.575720 3_2:+76117612 None:intergenic
TTATCCATCATCTGTATCCA+AGG 0.580476 3_2:+76118833 None:intergenic
TAATACACATCTACACGTCT+AGG 0.582676 3_2:+76118151 None:intergenic
GGCTTGTTGATTTGGGAGAG+AGG 0.583955 3_2:-76117001 Msa0425710:three_prime_UTR
CTAGGGGAATGAGAAAGTCT+CGG 0.584830 3_2:-76117022 Msa0425710:three_prime_UTR
CCGAAGATGCTAGTCATTGG+TGG 0.584906 3_2:-76117516 Msa0425710:CDS
CCTGAGTACTTGCAATCCAT+CGG 0.588767 3_2:-76117612 Msa0425710:CDS
TACTTCTGACGACAAACCAA+AGG 0.589022 3_2:-76117550 Msa0425710:CDS
ATGAAAGCGGAACGAGAGAG+TGG 0.589867 3_2:+76117660 None:intergenic
GAGTTATTTGGGGAATCTAG+AGG 0.590288 3_2:+76120121 None:intergenic
AAGAGCCAATGAGTTATTTG+GGG 0.590619 3_2:+76120111 None:intergenic
TTTGGTGGGTGAAGAAGAAG+AGG 0.592927 3_2:+76119352 None:intergenic
CGACTATGAGTTACCAGGCA+TGG 0.594580 3_2:-76118802 Msa0425710:CDS
TTGTAATGATTCATCATCAG+AGG 0.595726 3_2:+76117587 None:intergenic
TTGTTATAGAATGCGTTCTG+AGG 0.596541 3_2:+76119730 None:intergenic
TGAATTCTTAGACCATGAGT+AGG 0.598691 3_2:-76116950 Msa0425710:three_prime_UTR
TGAAGATGCAACTCCTGAGA+TGG 0.599312 3_2:-76118638 Msa0425710:CDS
ATGGAAAACCCTGCAATTTG+GGG 0.599898 3_2:-76119632 Msa0425710:CDS
ACTTCTGACGACAAACCAAA+GGG 0.601183 3_2:-76117549 Msa0425710:CDS
GCCAAATATAAAGTGTGTGG+TGG 0.602794 3_2:+76120143 None:intergenic
TTCATCATCAGAGGATCCGA+TGG 0.604092 3_2:+76117596 None:intergenic
TACTGCTTCGATATTGGGGA+GGG 0.606720 3_2:+76118668 None:intergenic
TGTGGAACTATCAAATTTGG+TGG 0.612711 3_2:+76119337 None:intergenic
TTGTAGTCTAGATAAAGGAT+TGG 0.612824 3_2:-76117478 Msa0425710:CDS
TAGGAATGAACCAATTAGAG+TGG 0.613983 3_2:+76120013 None:intergenic
AATGACTAGCATCTTCGGTA+CGG 0.620562 3_2:+76117521 None:intergenic
CTGGAACCATGAAAGTGCAA+TGG 0.622256 3_2:-76118528 Msa0425710:CDS
GGGCGAAGAATATGGGAATG+CGG 0.625266 3_2:-76118353 Msa0425710:CDS
ATAGTACTGCTTCGATATTG+GGG 0.625450 3_2:+76118664 None:intergenic
CCAAAACAATGGCTTCAAGA+GGG 0.625971 3_2:+76117139 None:intergenic
TGTGGTTGAAGAAGGAGCTG+TGG 0.626852 3_2:+76119782 None:intergenic
GAAGAATATGGGAATGCGGG+AGG 0.627874 3_2:-76118349 Msa0425710:CDS
GGCATGGCGTAGAGAACCAA+AGG 0.628323 3_2:-76118786 Msa0425710:intron
GGGGTGCGAAAAGGCATGTG+GGG 0.628732 3_2:-76117744 Msa0425710:CDS
GCATATCATCCCATTTAGGT+CGG 0.629636 3_2:+76118587 None:intergenic
TGCAACTCCTGAGATGGTGA+GGG 0.632971 3_2:-76118632 Msa0425710:CDS
ATTGACACCGGCCATGAAAG+CGG 0.633342 3_2:+76117647 None:intergenic
TGGTAAAACGAGTGATGTGA+AGG 0.634891 3_2:+76120163 None:intergenic
ACGTGGATCATCCAAAACAA+TGG 0.639277 3_2:+76117128 None:intergenic
ACTGTTCGATCAAAATCCAA+TGG 0.642035 3_2:+76117217 None:intergenic
CATGCCTGGTAACTCATAGT+CGG 0.646187 3_2:+76118803 None:intergenic
CCAAATTTGATAGTTCCACA+AGG 0.652382 3_2:-76119334 Msa0425710:intron
GAGGCCAAATATAAAGTGTG+TGG 0.652929 3_2:+76120140 None:intergenic
GTCCTACTATTGCGTCACAA+AGG 0.655181 3_2:-76118327 Msa0425710:intron
GTACTGCTTCGATATTGGGG+AGG 0.655617 3_2:+76118667 None:intergenic
GGAAACTATAATGGATAACG+TGG 0.662024 3_2:+76117111 None:intergenic
TACTCCGACTATGAGTTACC+AGG 0.668614 3_2:-76118807 Msa0425710:CDS
CTTGTTGAAGAGAAAGATGG+AGG 0.668763 3_2:-76118860 Msa0425710:CDS
GATGTTGGATCAAGATCGGG+CGG 0.673003 3_2:-76117302 Msa0425710:three_prime_UTR
AGATAAAGGATTGGTGACCA+AGG 0.675087 3_2:-76117469 Msa0425710:CDS
CAGAATTTATAAACTCTGTG+TGG 0.677998 3_2:-76116918 Msa0425710:three_prime_UTR
ATGTATTGTAAACATTCACA+TGG 0.678770 3_2:-76116843 Msa0425710:three_prime_UTR
GTGGAACTATCAAATTTGGT+GGG 0.683465 3_2:+76119338 None:intergenic
GTAATAGAAGAATTAACACA+AGG 0.716696 3_2:+76119434 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTGAATAATAATTTGGAATT+TGG + chr3_2:76116889-76116908 None:intergenic 15.0%
!! AATTAAAAAGATGACAAAAT+TGG + chr3_2:76117295-76117314 None:intergenic 15.0%
!! TAAGGAAAAAAAATTAAAAG+GGG + chr3_2:76117375-76117394 None:intergenic 15.0%
!! CTAAGGAAAAAAAATTAAAA+GGG + chr3_2:76117376-76117395 None:intergenic 15.0%
!! ACTAAGGAAAAAAAATTAAA+AGG + chr3_2:76117377-76117396 None:intergenic 15.0%
!!! ACAAAAAAAATCAAATTTTG+AGG - chr3_2:76117418-76117437 Msa0425710:CDS 15.0%
!!! CAAAAAAAATCAAATTTTGA+GGG - chr3_2:76117419-76117438 Msa0425710:CDS 15.0%
!! AATAAAGAGATCAATAAAAA+GGG - chr3_2:76117752-76117771 Msa0425710:CDS 15.0%
!! TAATAAAAAGGAAACTATAA+TGG + chr3_2:76120030-76120049 None:intergenic 15.0%
!! ATTATAAAAAAACCAAATCT+AGG - chr3_2:76120089-76120108 Msa0425710:five_prime_UTR 15.0%
!! TTATAAAAAAACCAAATCTA+GGG - chr3_2:76120090-76120109 Msa0425710:five_prime_UTR 15.0%
!!! TCTAAGTTTTGTCAATTTAA+CGG + chr3_2:76116856-76116875 None:intergenic 20.0%
!! ATGAGGTTTGAATAATAATT+TGG + chr3_2:76116896-76116915 None:intergenic 20.0%
!! AAAGAAGAATAGAATTTCAA+TGG + chr3_2:76117671-76117690 None:intergenic 20.0%
!! CAATAAAGAGATCAATAAAA+AGG - chr3_2:76117751-76117770 Msa0425710:CDS 20.0%
!! CAATTGAATTAATCCATAAT+TGG - chr3_2:76117950-76117969 Msa0425710:intron 20.0%
!! ATAAAGCTAATTTGGATATT+TGG - chr3_2:76118043-76118062 Msa0425710:intron 20.0%
!!! TTTTCAAACTTATCCAAAAT+TGG + chr3_2:76118073-76118092 None:intergenic 20.0%
!! TTTGGATAAGTTTGAAAATT+TGG - chr3_2:76118075-76118094 Msa0425710:intron 20.0%
!! TTGGATAAGTTTGAAAATTT+GGG - chr3_2:76118076-76118095 Msa0425710:intron 20.0%
!! TAATTTGAAAACTCAATAGA+AGG + chr3_2:76118409-76118428 None:intergenic 20.0%
!!! TTTTGTATTGTTGATTCAAT+AGG - chr3_2:76118434-76118453 Msa0425710:intron 20.0%
!! ATAAATCAAATCAAATCAAG+AGG + chr3_2:76118644-76118663 None:intergenic 20.0%
!!! CACATTTTGAAGTAATAAAA+AGG + chr3_2:76120042-76120061 None:intergenic 20.0%
!!! CTTTTTATTACTTCAAAATG+TGG - chr3_2:76120040-76120059 Msa0425710:five_prime_UTR 20.0%
!! TATAAAAAAACCAAATCTAG+GGG - chr3_2:76120091-76120110 Msa0425710:five_prime_UTR 20.0%
!!! ATAGAATACTTTTATTGCTA+CGG + chr3_2:76120249-76120268 None:intergenic 20.0%
! AGGGAAAATTAAATGGAAAT+GGG + chr3_2:76116810-76116829 None:intergenic 25.0%
! TAGGGAAAATTAAATGGAAA+TGG + chr3_2:76116811-76116830 None:intergenic 25.0%
!!! ATTTCCATTTAATTTTCCCT+AGG - chr3_2:76116810-76116829 Msa0425710:three_prime_UTR 25.0%
! TATGAAGAAGAAATGTGAAT+AGG + chr3_2:76117150-76117169 None:intergenic 25.0%
! AGAGAAAGACAAAAAGATAT+GGG + chr3_2:76117251-76117270 None:intergenic 25.0%
! AAGAGAAAGACAAAAAGATA+TGG + chr3_2:76117252-76117271 None:intergenic 25.0%
! CAAAATTGGTGAAAAATAAG+AGG + chr3_2:76117281-76117300 None:intergenic 25.0%
! ATTTGAGGAGAAGAATAATT+AGG + chr3_2:76117324-76117343 None:intergenic 25.0%
!! AAAAAATTAAAAGGGGTATG+TGG + chr3_2:76117368-76117387 None:intergenic 25.0%
!!! GAAACTTTTTCTTGTTACAA+TGG - chr3_2:76117478-76117497 Msa0425710:CDS 25.0%
! AAGAAAAACACTAACAACAT+AGG + chr3_2:76117548-76117567 None:intergenic 25.0%
!! ATGTTGTTAGTGTTTTTCTT+AGG - chr3_2:76117548-76117567 Msa0425710:CDS 25.0%
!! TTTTTCTTAGGAGTTATTGT+TGG - chr3_2:76117560-76117579 Msa0425710:CDS 25.0%
!! AATATAGGAGAATCTGAAAT+TGG + chr3_2:76117644-76117663 None:intergenic 25.0%
! AATTTCAATGGCGAAAATAT+AGG + chr3_2:76117659-76117678 None:intergenic 25.0%
! GTAATAGAAGAATTAACACA+AGG + chr3_2:76117698-76117717 None:intergenic 25.0%
! ATTAATGGAAAATTACCTTG+TGG + chr3_2:76117813-76117832 None:intergenic 25.0%
!! TTCATGTTTTTCTGTTATTG+AGG - chr3_2:76117865-76117884 Msa0425710:intron 25.0%
!! TTTTCTGTTATTGAGGAATT+AGG - chr3_2:76117872-76117891 Msa0425710:intron 25.0%
! AATTGGGAATTAAAGATAGT+AGG - chr3_2:76118020-76118039 Msa0425710:intron 25.0%
! ATAGTAGGATAAAGCTAATT+TGG - chr3_2:76118035-76118054 Msa0425710:intron 25.0%
!! GATATTTGGTTAACCAATTT+TGG - chr3_2:76118057-76118076 Msa0425710:intron 25.0%
!!! TTTGAAAATTTGGGTTGAAT+GGG - chr3_2:76118085-76118104 Msa0425710:intron 25.0%
! GCATTGTTTGAATGTTTAAT+TGG - chr3_2:76118133-76118152 Msa0425710:CDS 25.0%
! TTTGAATGTTTAATTGGCTA+TGG - chr3_2:76118139-76118158 Msa0425710:CDS 25.0%
! AAAGACAGAGAATACATTAT+CGG - chr3_2:76118755-76118774 Msa0425710:intron 25.0%
!!! ACTTATTTTTGTATTGACAC+CGG + chr3_2:76119497-76119516 None:intergenic 25.0%
!!! AAGATTTGGATTTGCTAATT+TGG - chr3_2:76119705-76119724 Msa0425710:five_prime_UTR 25.0%
!!! AGATTTGGATTTGCTAATTT+GGG - chr3_2:76119706-76119725 Msa0425710:five_prime_UTR 25.0%
! GTAAAAGATAGTAGAACTAA+AGG - chr3_2:76119728-76119747 Msa0425710:five_prime_UTR 25.0%
! TTTATTACTTCAAAATGTGG+AGG - chr3_2:76120043-76120062 Msa0425710:five_prime_UTR 25.0%
! ATGTATTGTAAACATTCACA+TGG - chr3_2:76120286-76120305 Msa0425710:five_prime_UTR 25.0%
TGATGTTGGAATTGAAAATG+AGG + chr3_2:76116913-76116932 None:intergenic 30.0%
!!! AAGAGTGTTGATTTTGATGT+TGG + chr3_2:76116927-76116946 None:intergenic 30.0%
! TTTGTGTTGGAGAATTTGTT+TGG + chr3_2:76117072-76117091 None:intergenic 30.0%
TAAACCAAAACCACTCTAAT+TGG - chr3_2:76117106-76117125 Msa0425710:three_prime_UTR 30.0%
ATGTGAATAGGAATAGGAAT+AGG + chr3_2:76117138-76117157 None:intergenic 30.0%
GAAGAAATGTGAATAGGAAT+AGG + chr3_2:76117144-76117163 None:intergenic 30.0%
!!! GGTTTTGTTTTTATGGGTTT+GGG + chr3_2:76117181-76117200 None:intergenic 30.0%
!!! GAAGAGGGTTTTGTTTTTAT+GGG + chr3_2:76117187-76117206 None:intergenic 30.0%
!!! AGAAGAGGGTTTTGTTTTTA+TGG + chr3_2:76117188-76117207 None:intergenic 30.0%
GAAAGAAGATAAGAAGAAGA+GGG + chr3_2:76117202-76117221 None:intergenic 30.0%
AGAAAGAAGATAAGAAGAAG+AGG + chr3_2:76117203-76117222 None:intergenic 30.0%
!!! TGTTTTGATTAAGACGTGAA+GGG + chr3_2:76117227-76117246 None:intergenic 30.0%
GAGAAAGACAAAAAGATATG+GGG + chr3_2:76117250-76117269 None:intergenic 30.0%
AGAGGGTGAAATAAACTAAA+GGG + chr3_2:76117447-76117466 None:intergenic 30.0%
AAGAGGGTGAAATAAACTAA+AGG + chr3_2:76117448-76117467 None:intergenic 30.0%
AGTTTATTTCACCCTCTTAA+AGG - chr3_2:76117450-76117469 Msa0425710:CDS 30.0%
GTTTATTTCACCCTCTTAAA+GGG - chr3_2:76117451-76117470 Msa0425710:CDS 30.0%
! AGTTTCAAAACCCTTTAAGA+GGG + chr3_2:76117464-76117483 None:intergenic 30.0%
AAGTTTCAAAACCCTTTAAG+AGG + chr3_2:76117465-76117484 None:intergenic 30.0%
TATTGATGCACAAAGAATCA+GGG + chr3_2:76117736-76117755 None:intergenic 30.0%
TTATTGATGCACAAAGAATC+AGG + chr3_2:76117737-76117756 None:intergenic 30.0%
! GGAATTAGGTAGATGATTTT+TGG - chr3_2:76117886-76117905 Msa0425710:intron 30.0%
! AATCCATAATTGGTCTATGA+TGG - chr3_2:76117960-76117979 Msa0425710:intron 30.0%
TCCTTAACTACTAGTGAAAT+TGG - chr3_2:76118003-76118022 Msa0425710:intron 30.0%
CCTTAACTACTAGTGAAATT+GGG - chr3_2:76118004-76118023 Msa0425710:intron 30.0%
!! GTTTGAAAATTTGGGTTGAA+TGG - chr3_2:76118084-76118103 Msa0425710:intron 30.0%
!! GTATTGTTGATTCAATAGGA+CGG - chr3_2:76118438-76118457 Msa0425710:intron 30.0%
AATAGTACTGCTTCGATATT+GGG + chr3_2:76118469-76118488 None:intergenic 30.0%
AAATAGTACTGCTTCGATAT+TGG + chr3_2:76118470-76118489 None:intergenic 30.0%
! TATCTGTTTTCATGTGCTTA+TGG - chr3_2:76118695-76118714 Msa0425710:intron 30.0%
AAGACAGAGAATACATTATC+GGG - chr3_2:76118756-76118775 Msa0425710:intron 30.0%
! TTGAAGTCATTGATTGAAGA+TGG - chr3_2:76118860-76118879 Msa0425710:CDS 30.0%
!! TATTTGCTTTTCTTCCTTTC+AGG - chr3_2:76118920-76118939 Msa0425710:CDS 30.0%
!! ATTTGCTTTTCTTCCTTTCA+GGG - chr3_2:76118921-76118940 Msa0425710:CDS 30.0%
TAGATGTGTATTACTCTAGT+TGG - chr3_2:76118988-76119007 Msa0425710:intron 30.0%
GTTGAATCAAAGAGAGATAA+TGG - chr3_2:76119289-76119308 Msa0425710:intron 30.0%
TTGTAATGATTCATCATCAG+AGG + chr3_2:76119545-76119564 None:intergenic 30.0%
TTGTAGTCTAGATAAAGGAT+TGG - chr3_2:76119651-76119670 Msa0425710:exon 30.0%
!! TTTGGTGTTGCTAAAAGATT+TGG - chr3_2:76119691-76119710 Msa0425710:five_prime_UTR 30.0%
AAAGATAGTAGAACTAAAGG+TGG - chr3_2:76119731-76119750 Msa0425710:five_prime_UTR 30.0%
! GAGTTTGAAATTTAGACCAT+TGG - chr3_2:76119896-76119915 Msa0425710:five_prime_UTR 30.0%
CACAGAGTTTATAAATTCTG+TGG + chr3_2:76120211-76120230 None:intergenic 30.0%
CAGAATTTATAAACTCTGTG+TGG - chr3_2:76120211-76120230 Msa0425710:five_prime_UTR 30.0%
AAACATTCACATGGTAAAGT+TGG - chr3_2:76120295-76120314 Msa0425710:five_prime_UTR 30.0%
! GAAGGAAATTGAGGTATTAG+TGG + chr3_2:76116784-76116803 None:intergenic 35.0%
TTAAATGGAAATGGGAGTGA+AGG + chr3_2:76116802-76116821 None:intergenic 35.0%
TGGTCCTAGGGAAAATTAAA+TGG + chr3_2:76116817-76116836 None:intergenic 35.0%
ACCACCACACACTTTATATT+TGG - chr3_2:76116985-76117004 Msa0425710:three_prime_UTR 35.0%
AGATTCCCCAAATAACTCAT+TGG - chr3_2:76117013-76117032 Msa0425710:three_prime_UTR 35.0%
AAGAGCCAATGAGTTATTTG+GGG + chr3_2:76117021-76117040 None:intergenic 35.0%
GAAGAGCCAATGAGTTATTT+GGG + chr3_2:76117022-76117041 None:intergenic 35.0%
TGAAGAGCCAATGAGTTATT+TGG + chr3_2:76117023-76117042 None:intergenic 35.0%
!!! GAGTGGTTTTGGTTTATGTT+AGG + chr3_2:76117102-76117121 None:intergenic 35.0%
! TGAACCAATTAGAGTGGTTT+TGG + chr3_2:76117113-76117132 None:intergenic 35.0%
TAGGAATGAACCAATTAGAG+TGG + chr3_2:76117119-76117138 None:intergenic 35.0%
!!! GGGTTTTGTTTTTATGGGTT+TGG + chr3_2:76117182-76117201 None:intergenic 35.0%
!!! GTGTTTTGATTAAGACGTGA+AGG + chr3_2:76117228-76117247 None:intergenic 35.0%
TGGTGAAAAATAAGAGGAAG+AGG + chr3_2:76117275-76117294 None:intergenic 35.0%
TTGTTATAGAATGCGTTCTG+AGG + chr3_2:76117402-76117421 None:intergenic 35.0%
AATGGAAAACCCTGCAATTT+GGG - chr3_2:76117496-76117515 Msa0425710:CDS 35.0%
CATTAAAACCCCAAATTGCA+GGG + chr3_2:76117508-76117527 None:intergenic 35.0%
TCTTAGGAGTTATTGTTGGT+TGG - chr3_2:76117564-76117583 Msa0425710:CDS 35.0%
! GAGTTATTGTTGGTTGGTTA+TGG - chr3_2:76117570-76117589 Msa0425710:CDS 35.0%
!! ACCGAAATGGATTGTTTCAT+TGG - chr3_2:76117595-76117614 Msa0425710:CDS 35.0%
GCCAATGAAACAATCCATTT+CGG + chr3_2:76117599-76117618 None:intergenic 35.0%
GTGGAACTATCAAATTTGGT+GGG + chr3_2:76117794-76117813 None:intergenic 35.0%
TGTGGAACTATCAAATTTGG+TGG + chr3_2:76117795-76117814 None:intergenic 35.0%
CCTTGTGGAACTATCAAATT+TGG + chr3_2:76117798-76117817 None:intergenic 35.0%
! CCAAATTTGATAGTTCCACA+AGG - chr3_2:76117795-76117814 Msa0425710:CDS 35.0%
CCCAATTTCACTAGTAGTTA+AGG + chr3_2:76118007-76118026 None:intergenic 35.0%
!! ACCATTAGAAGTATCTTCAC+CGG + chr3_2:76118216-76118235 None:intergenic 35.0%
!! AAGCTTGTTGAAGAGAAAGA+TGG - chr3_2:76118266-76118285 Msa0425710:intron 35.0%
TTATCCATCATCTGTATCCA+AGG + chr3_2:76118299-76118318 None:intergenic 35.0%
CTTCTATCGTAACATACCTT+TGG + chr3_2:76118362-76118381 None:intergenic 35.0%
! CAAAGGTATGTTACGATAGA+AGG - chr3_2:76118360-76118379 Msa0425710:CDS 35.0%
ATAGTACTGCTTCGATATTG+GGG + chr3_2:76118468-76118487 None:intergenic 35.0%
ATGATCAATTCCGACCTAAA+TGG - chr3_2:76118532-76118551 Msa0425710:CDS 35.0%
TGATCAATTCCGACCTAAAT+GGG - chr3_2:76118533-76118552 Msa0425710:CDS 35.0%
ACAAGCATATCATCCCATTT+AGG + chr3_2:76118549-76118568 None:intergenic 35.0%
TCTTATCCATTGCACTTTCA+TGG + chr3_2:76118610-76118629 None:intergenic 35.0%
! GAAAGTGCAATGGATAAGAA+AGG - chr3_2:76118611-76118630 Msa0425710:CDS 35.0%
TCTCTGTCTTTACAGAAGAA+GGG + chr3_2:76118746-76118765 None:intergenic 35.0%
TTCTCTGTCTTTACAGAAGA+AGG + chr3_2:76118747-76118766 None:intergenic 35.0%
!! TTTGCTTTTCTTCCTTTCAG+GGG - chr3_2:76118922-76118941 Msa0425710:CDS 35.0%
! TTTTCTTGTCTTGGGATTGA+AGG + chr3_2:76118957-76118976 None:intergenic 35.0%
! GTCTAGGTTTTTCTTGTCTT+GGG + chr3_2:76118965-76118984 None:intergenic 35.0%
TAATACACATCTACACGTCT+AGG + chr3_2:76118981-76119000 None:intergenic 35.0%
AGCCTATATAACAAGTCAAG+CGG + chr3_2:76119230-76119249 None:intergenic 35.0%
CTCTTCCATCATGAAGAAAT+GGG - chr3_2:76119337-76119356 Msa0425710:CDS 35.0%
GAATTCCCATTTCTTCATGA+TGG + chr3_2:76119345-76119364 None:intergenic 35.0%
ATGAAGAAATGGGAATTCCT+TGG - chr3_2:76119347-76119366 Msa0425710:CDS 35.0%
TGAAGAAATGGGAATTCCTT+GGG - chr3_2:76119348-76119367 Msa0425710:CDS 35.0%
TATCAAGAAGCAAAAGCTTC+TGG - chr3_2:76119442-76119461 Msa0425710:CDS 35.0%
CTTGCTTGTAGTCTAGATAA+AGG - chr3_2:76119646-76119665 Msa0425710:exon 35.0%
AACACCAAATATAACAGCCT+TGG + chr3_2:76119680-76119699 None:intergenic 35.0%
ATCAATCTCTTGAAGGGATT+TGG - chr3_2:76119755-76119774 Msa0425710:five_prime_UTR 35.0%
ACTGTTCGATCAAAATCCAA+TGG + chr3_2:76119915-76119934 None:intergenic 35.0%
!! GGAAACTATAATGGATAACG+TGG + chr3_2:76120021-76120040 None:intergenic 35.0%
!!! AAATGTGGAGGCTCTTTTTT+TGG - chr3_2:76120055-76120074 Msa0425710:five_prime_UTR 35.0%
TGAATTCTTAGACCATGAGT+AGG - chr3_2:76120179-76120198 Msa0425710:five_prime_UTR 35.0%
AATGGGAGTGAAGGAAATTG+AGG + chr3_2:76116793-76116812 None:intergenic 40.0%
TGATTGTTTGCTTGGTCCTA+GGG + chr3_2:76116829-76116848 None:intergenic 40.0%
TTGATTGTTTGCTTGGTCCT+AGG + chr3_2:76116830-76116849 None:intergenic 40.0%
TGGTAAAACGAGTGATGTGA+AGG + chr3_2:76116969-76116988 None:intergenic 40.0%
GCCAAATATAAAGTGTGTGG+TGG + chr3_2:76116989-76117008 None:intergenic 40.0%
GAGGCCAAATATAAAGTGTG+TGG + chr3_2:76116992-76117011 None:intergenic 40.0%
GAGTTATTTGGGGAATCTAG+AGG + chr3_2:76117011-76117030 None:intergenic 40.0%
! GTTAGGTGTTGTGTTTGTGT+TGG + chr3_2:76117085-76117104 None:intergenic 40.0%
AAGGAGCTGTGGAATATTTG+AGG + chr3_2:76117339-76117358 None:intergenic 40.0%
!! AATGCGTTCTGAGGAAACTA+AGG + chr3_2:76117393-76117412 None:intergenic 40.0%
CAATGGAAAACCCTGCAATT+TGG - chr3_2:76117495-76117514 Msa0425710:CDS 40.0%
ATGGAAAACCCTGCAATTTG+GGG - chr3_2:76117497-76117516 Msa0425710:CDS 40.0%
GCATTAAAACCCCAAATTGC+AGG + chr3_2:76117509-76117528 None:intergenic 40.0%
GTTGGTTATGGAAACCGAAA+TGG - chr3_2:76117582-76117601 Msa0425710:CDS 40.0%
ATGCACAAAGAATCAGGGTT+TGG + chr3_2:76117731-76117750 None:intergenic 40.0%
GCACCATCATAGACCAATTA+TGG + chr3_2:76117966-76117985 None:intergenic 40.0%
!! GAAAATTTGGGTTGAATGGG+TGG - chr3_2:76118088-76118107 Msa0425710:intron 40.0%
CTATGCAGTTCTCAGAAATC+CGG - chr3_2:76118194-76118213 Msa0425710:intron 40.0%
TCCGGTGAAGATACTTCTAA+TGG - chr3_2:76118212-76118231 Msa0425710:intron 40.0%
CTTGTTGAAGAGAAAGATGG+AGG - chr3_2:76118269-76118288 Msa0425710:intron 40.0%
TCTTCCTTGGATACAGATGA+TGG - chr3_2:76118292-76118311 Msa0425710:intron 40.0%
GCATATCATCCCATTTAGGT+CGG + chr3_2:76118545-76118564 None:intergenic 40.0%
CTCTGTCTTTACAGAAGAAG+GGG + chr3_2:76118745-76118764 None:intergenic 40.0%
ACATTATCGGGCGAAGAATA+TGG - chr3_2:76118768-76118787 Msa0425710:intron 40.0%
CATTATCGGGCGAAGAATAT+GGG - chr3_2:76118769-76118788 Msa0425710:intron 40.0%
TACCTTTGTGACGCAATAGT+AGG + chr3_2:76118807-76118826 None:intergenic 40.0%
!! TTGCTTTTCTTCCTTTCAGG+GGG - chr3_2:76118923-76118942 Msa0425710:CDS 40.0%
! CGTCTAGGTTTTTCTTGTCT+TGG + chr3_2:76118966-76118985 None:intergenic 40.0%
!! CACCGCTTGACTTGTTATAT+AGG - chr3_2:76119225-76119244 Msa0425710:intron 40.0%
GCTCTTCCATCATGAAGAAA+TGG - chr3_2:76119336-76119355 Msa0425710:CDS 40.0%
CTTGGGAAATTGCAAAGCTT+GGG - chr3_2:76119365-76119384 Msa0425710:CDS 40.0%
TTGGGAAATTGCAAAGCTTG+GGG - chr3_2:76119366-76119385 Msa0425710:CDS 40.0%
ATGGTACAAAAGATTGAGCC+CGG - chr3_2:76119409-76119428 Msa0425710:CDS 40.0%
TTCTTGATAAGCGCGTAAAC+CGG + chr3_2:76119431-76119450 None:intergenic 40.0%
GTCAGAAGTAATCGCACTTT+CGG + chr3_2:76119569-76119588 None:intergenic 40.0%
TACTTCTGACGACAAACCAA+AGG - chr3_2:76119579-76119598 Msa0425710:CDS 40.0%
ACTTCTGACGACAAACCAAA+GGG - chr3_2:76119580-76119599 Msa0425710:CDS 40.0%
AATGACTAGCATCTTCGGTA+CGG + chr3_2:76119611-76119630 None:intergenic 40.0%
! AGATAAAGGATTGGTGACCA+AGG - chr3_2:76119660-76119679 Msa0425710:five_prime_UTR 40.0%
GTGACCAAGGCTGTTATATT+TGG - chr3_2:76119673-76119692 Msa0425710:five_prime_UTR 40.0%
AGGTGGAATCAATCTCTTGA+AGG - chr3_2:76119748-76119767 Msa0425710:five_prime_UTR 40.0%
GGTGGAATCAATCTCTTGAA+GGG - chr3_2:76119749-76119768 Msa0425710:five_prime_UTR 40.0%
CATCCAAATGCGCATTACAT+TGG - chr3_2:76119802-76119821 Msa0425710:five_prime_UTR 40.0%
CAACCAATGTAATGCGCATT+TGG + chr3_2:76119808-76119827 None:intergenic 40.0%
! CGCATTACATTGGTTGATGT+TGG - chr3_2:76119812-76119831 Msa0425710:five_prime_UTR 40.0%
! GGTTGATGTTGGATCAAGAT+CGG - chr3_2:76119823-76119842 Msa0425710:five_prime_UTR 40.0%
GTTGATGTTGGATCAAGATC+GGG - chr3_2:76119824-76119843 Msa0425710:five_prime_UTR 40.0%
CCAAAACAATGGCTTCAAGA+GGG + chr3_2:76119993-76120012 None:intergenic 40.0%
TCCAAAACAATGGCTTCAAG+AGG + chr3_2:76119994-76120013 None:intergenic 40.0%
ACGTGGATCATCCAAAACAA+TGG + chr3_2:76120004-76120023 None:intergenic 40.0%
CTTTCTCATTCCCCTAGATT+TGG + chr3_2:76120104-76120123 None:intergenic 40.0%
!! AAAGTCTCGGCTTGTTGATT+TGG - chr3_2:76120120-76120139 Msa0425710:five_prime_UTR 40.0%
!! AAGTCTCGGCTTGTTGATTT+GGG - chr3_2:76120121-76120140 Msa0425710:five_prime_UTR 40.0%
ACGGCGTTTGATTGTTTGCT+TGG + chr3_2:76116837-76116856 None:intergenic 45.0%
! AAGGGGTATGTGGTTGAAGA+AGG + chr3_2:76117358-76117377 None:intergenic 45.0%
! TTTGGTGGGTGAAGAAGAAG+AGG + chr3_2:76117780-76117799 None:intergenic 45.0%
AGAAAGATGGAGGTCTTCCT+TGG - chr3_2:76118279-76118298 Msa0425710:intron 45.0%
TACTCCGACTATGAGTTACC+AGG - chr3_2:76118322-76118341 Msa0425710:intron 45.0%
CATGCCTGGTAACTCATAGT+CGG + chr3_2:76118329-76118348 None:intergenic 45.0%
TACTGCTTCGATATTGGGGA+GGG + chr3_2:76118464-76118483 None:intergenic 45.0%
TGAAGATGCAACTCCTGAGA+TGG - chr3_2:76118491-76118510 Msa0425710:intron 45.0%
AACAAATCCCTCACCATCTC+AGG + chr3_2:76118507-76118526 None:intergenic 45.0%
! AGATGGTGAGGGATTTGTTC+TGG - chr3_2:76118508-76118527 Msa0425710:intron 45.0%
! GATGGTGAGGGATTTGTTCT+GGG - chr3_2:76118509-76118528 Msa0425710:intron 45.0%
!! TTAGAAGAGTGTCCTACCAC+TGG - chr3_2:76118582-76118601 Msa0425710:CDS 45.0%
ACTTTCATGGTTCCAGTGGT+AGG + chr3_2:76118597-76118616 None:intergenic 45.0%
TTGCACTTTCATGGTTCCAG+TGG + chr3_2:76118601-76118620 None:intergenic 45.0%
! CTGGAACCATGAAAGTGCAA+TGG - chr3_2:76118601-76118620 Msa0425710:CDS 45.0%
GTCCTACTATTGCGTCACAA+AGG - chr3_2:76118802-76118821 Msa0425710:CDS 45.0%
CCAAGCTTTGCAATTTCCCA+AGG + chr3_2:76119367-76119386 None:intergenic 45.0%
CCTTGGGAAATTGCAAAGCT+TGG - chr3_2:76119364-76119383 Msa0425710:CDS 45.0%
TCTTGATAAGCGCGTAAACC+GGG + chr3_2:76119430-76119449 None:intergenic 45.0%
CCTGAGTACTTGCAATCCAT+CGG - chr3_2:76119517-76119536 Msa0425710:CDS 45.0%
TTCATCATCAGAGGATCCGA+TGG + chr3_2:76119536-76119555 None:intergenic 45.0%
GTACCGAAGATGCTAGTCAT+TGG - chr3_2:76119610-76119629 Msa0425710:CDS 45.0%
CCACCAATGACTAGCATCTT+CGG + chr3_2:76119616-76119635 None:intergenic 45.0%
! CCCTCTTGAAGCCATTGTTT+TGG - chr3_2:76119990-76120009 Msa0425710:five_prime_UTR 45.0%
CTAGGGGAATGAGAAAGTCT+CGG - chr3_2:76120107-76120126 Msa0425710:five_prime_UTR 45.0%
!! GCTTGTTGATTTGGGAGAGA+GGG - chr3_2:76120129-76120148 Msa0425710:five_prime_UTR 45.0%
!!! CTGTGGTTTTGACCTACTCA+TGG + chr3_2:76120194-76120213 None:intergenic 45.0%
!! TAACTTATTTATTTAATTAA+TGG + chr3_2:76117828-76117847 None:intergenic 5.0%
TGTGGTTGAAGAAGGAGCTG+TGG + chr3_2:76117350-76117369 None:intergenic 50.0%
CGACTATGAGTTACCAGGCA+TGG - chr3_2:76118327-76118346 Msa0425710:intron 50.0%
GTACTGCTTCGATATTGGGG+AGG + chr3_2:76118465-76118484 None:intergenic 50.0%
ATGCAACTCCTGAGATGGTG+AGG - chr3_2:76118496-76118515 Msa0425710:intron 50.0%
TGCAACTCCTGAGATGGTGA+GGG - chr3_2:76118497-76118516 Msa0425710:intron 50.0%
GGGCGAAGAATATGGGAATG+CGG - chr3_2:76118776-76118795 Msa0425710:intron 50.0%
GGCGAAGAATATGGGAATGC+GGG - chr3_2:76118777-76118796 Msa0425710:intron 50.0%
GAAGAATATGGGAATGCGGG+AGG - chr3_2:76118780-76118799 Msa0425710:intron 50.0%
AGGACAATCTACCCCCTGAA+AGG + chr3_2:76118937-76118956 None:intergenic 50.0%
! TCTAGTTGGTGCATTCGAGC+AGG - chr3_2:76119002-76119021 Msa0425710:intron 50.0%
ATGAAAGCGGAACGAGAGAG+TGG + chr3_2:76119472-76119491 None:intergenic 50.0%
ACTCTCTCGTTCCGCTTTCA+TGG - chr3_2:76119471-76119490 Msa0425710:CDS 50.0%
ATTGACACCGGCCATGAAAG+CGG + chr3_2:76119485-76119504 None:intergenic 50.0%
!! CCGATGGATTGCAAGTACTC+AGG + chr3_2:76119520-76119539 None:intergenic 50.0%
CCGAAGATGCTAGTCATTGG+TGG - chr3_2:76119613-76119632 Msa0425710:CDS 50.0%
GATGTTGGATCAAGATCGGG+CGG - chr3_2:76119827-76119846 Msa0425710:five_prime_UTR 50.0%
!! GGCTTGTTGATTTGGGAGAG+AGG - chr3_2:76120128-76120147 Msa0425710:five_prime_UTR 50.0%
! TTGGTTCTCTACGCCATGCC+TGG + chr3_2:76118343-76118362 None:intergenic 55.0%
GGCATGGCGTAGAGAACCAA+AGG - chr3_2:76118343-76118362 Msa0425710:CDS 55.0%
GCAAAGCTTGGGGTGCGAAA+AGG - chr3_2:76119376-76119395 Msa0425710:CDS 55.0%
! TTGGGGTGCGAAAAGGCATG+TGG - chr3_2:76119383-76119402 Msa0425710:CDS 55.0%
! TGGGGTGCGAAAAGGCATGT+GGG - chr3_2:76119384-76119403 Msa0425710:CDS 55.0%
! GCGAAAAGGCATGTGGGGAA+TGG - chr3_2:76119390-76119409 Msa0425710:CDS 55.0%
TCTCGTTCCGCTTTCATGGC+CGG - chr3_2:76119475-76119494 Msa0425710:CDS 55.0%
TTCGGTACGGTCATGCCCTT+TGG + chr3_2:76119598-76119617 None:intergenic 55.0%
! GGGGTGCGAAAAGGCATGTG+GGG - chr3_2:76119385-76119404 Msa0425710:CDS 60.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 76116772 76120379 76116772 ID=Msa0425710;Name=Msa0425710
chr3_2 mRNA 76116772 76120379 76116772 ID=Msa0425710-mRNA-1;Parent=Msa0425710;Name=Msa0425710-mRNA-1;_AED=0.05;_eAED=0.05;_QI=725|1|1|1|1|1|6|641|424
chr3_2 exon 76116772 76117861 76116772 ID=Msa0425710-mRNA-1:exon:19603;Parent=Msa0425710-mRNA-1
chr3_2 exon 76118128 76118209 76118128 ID=Msa0425710-mRNA-1:exon:19602;Parent=Msa0425710-mRNA-1
chr3_2 exon 76118328 76118411 76118328 ID=Msa0425710-mRNA-1:exon:19601;Parent=Msa0425710-mRNA-1
chr3_2 exon 76118519 76118695 76118519 ID=Msa0425710-mRNA-1:exon:19600;Parent=Msa0425710-mRNA-1
chr3_2 exon 76118787 76118949 76118787 ID=Msa0425710-mRNA-1:exon:19599;Parent=Msa0425710-mRNA-1
chr3_2 exon 76119335 76120379 76119335 ID=Msa0425710-mRNA-1:exon:19598;Parent=Msa0425710-mRNA-1
chr3_2 five_prime_UTR 76119655 76120379 76119655 ID=Msa0425710-mRNA-1:five_prime_utr;Parent=Msa0425710-mRNA-1
chr3_2 CDS 76119335 76119654 76119335 ID=Msa0425710-mRNA-1:cds;Parent=Msa0425710-mRNA-1
chr3_2 CDS 76118787 76118949 76118787 ID=Msa0425710-mRNA-1:cds;Parent=Msa0425710-mRNA-1
chr3_2 CDS 76118519 76118695 76118519 ID=Msa0425710-mRNA-1:cds;Parent=Msa0425710-mRNA-1
chr3_2 CDS 76118328 76118411 76118328 ID=Msa0425710-mRNA-1:cds;Parent=Msa0425710-mRNA-1
chr3_2 CDS 76118128 76118209 76118128 ID=Msa0425710-mRNA-1:cds;Parent=Msa0425710-mRNA-1
chr3_2 CDS 76117413 76117861 76117413 ID=Msa0425710-mRNA-1:cds;Parent=Msa0425710-mRNA-1
chr3_2 three_prime_UTR 76116772 76117412 76116772 ID=Msa0425710-mRNA-1:three_prime_utr;Parent=Msa0425710-mRNA-1
Gene Sequence

>Msa0425710

ATGGAAAACCCTGCAATTTGGGGTTTTAATGCAACGATGTTTATGAGTCCTATGTTGTTAGTGTTTTTCTTAGGAGTTATTGTTGGTTGGTTATGGAAACCGAAATGGATTGTTTCATTGGCTAAGTCTTTTGATTTAGCTTCACCAATTTCAGATTCTCCTATATTTTCGCCATTGAAATTCTATTCTTCTTTGTCTCCTTGTGTTAATTCTTCTATTACAATGCAAAATCCAAACCCTGATTCTTTGTGCATCAATAAAGAGATCAATAAAAAGGGTTCCTCTTCTTCTTCACCCACCAAATTTGATAGTTCCACAAGTTCTCAGAAATCCGGTGAAGATACTTCTAATGGTGTTACAATCAATGATTTACATCATTTATACAAGCTTGTTGAAGAGAAAGATGGAGGTCTTCCTTGGATACAGATGATGGATAAATCTACTCCGACTATGAGTTACCAGGCATGGCGTAGAGAACCAAAGGACGGCCCTCCCCAATATCGAAGCAGTACTATTTTTGAAGATGCAACTCCTGAGATGGTGAGGGATTTGTTCTGGGATGATCAATTCCGACCTAAATGGGATGATATGCTTGTGAACTCAACAACATTAGAAGAGTGTCCTACCACTGGAACCATGAAAGTGCAATGGATAAGAAAGTTCCCCTTCTTCTGTAAAGACAGAGAATACATTATCGGGCGAAGAATATGGGAATGCGGGAGGTCCTACTATTGCGTCACAAAGGGGGTAGATTGTCCTTCAATCCCAAGACAAGAAAAACCTAGACGTGTAGATGTGTATTACTCTAGTTGGTGCATTCGAGCAGTTGAATCAAAGAGAGATAATGGTCAACTGACTGCATGTGAAGTTTTGCTCTTCCATCATGAAGAAATGGGAATTCCTTGGGAAATTGCAAAGCTTGGGGTGCGAAAAGGCATGTGGGGAATGGTACAAAAGATTGAGCCCGGTTTACGCGCTTATCAAGAAGCAAAAGCTTCTGGAGCTCCACTCTCTCGTTCCGCTTTCATGGCCGGTGTCAATACAAAAATAAGTCCTGAGTACTTGCAATCCATCGGATCCTCTGATGATGAATCATTACAAACCGAAAGTGCGATTACTTCTGACGACAAACCAAAGGGCATGACCGTACCGAAGATGCTAGTCATTGGTGGTGCTGTTGCTCTTGCTTGTAGTCTAGATAAAGGATTGGTGACCAAGGCTGTTATATTTGGTGTTGCTAAAAGATTTGGATTTGCTAATTTGGGTAAAAGATAG
Protein sequence

>Msa0425710

MENPAIWGFNATMFMSPMLLVFFLGVIVGWLWKPKWIVSLAKSFDLASPISDSPIFSPLKFYSSLSPCVNSSITMQNPNPDSLCINKEINKKGSSSSSPTKFDSSTSSQKSGEDTSNGVTINDLHHLYKLVEEKDGGLPWIQMMDKSTPTMSYQAWRREPKDGPPQYRSSTIFEDATPEMVRDLFWDDQFRPKWDDMLVNSTTLEECPTTGTMKVQWIRKFPFFCKDREYIIGRRIWECGRSYYCVTKGVDCPSIPRQEKPRRVDVYYSSWCIRAVESKRDNGQLTACEVLLFHHEEMGIPWEIAKLGVRKGMWGMVQKIEPGLRAYQEAKASGAPLSRSAFMAGVNTKISPEYLQSIGSSDDESLQTESAITSDDKPKGMTVPKMLVIGGAVALACSLDKGLVTKAVIFGVAKRFGFANLGKR*