Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0092050 | XP_039683963.1 | 98.884 | 448 | 5 | 0 | 1 | 448 | 1 | 448 | 0.0 | 925 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0092050 | sp|Q8LPJ1|CKL6_ARATH | 72.594 | 478 | 98 | 11 | 1 | 448 | 5 | 479 | 0.0 | 679 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0092050 | A0A072VLK3 | 97.577 | 454 | 5 | 1 | 1 | 448 | 1 | 454 | 0.0 | 919 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0092050 | Msa0092140 | 0.985421 | 1.636959e-163 | -8.615850e-47 |
Msa0092050 | Msa0122800 | 0.993708 | 1.208065e-201 | -8.615850e-47 |
Msa0092050 | Msa0165230 | 0.927523 | 1.043415e-91 | -8.615850e-47 |
Msa0092050 | Msa0165290 | 0.942808 | 3.723321e-102 | -8.615850e-47 |
Msa0092050 | Msa1415960 | 0.959977 | 4.861478e-118 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0092050 | MtrunA17_Chr1g0183631 | 97.577 | 454 | 5 | 1 | 1 | 448 | 1 | 454 | 0.0 | 919 |
Msa0092050 | MtrunA17_Chr7g0261501 | 78.065 | 465 | 83 | 7 | 1 | 448 | 1 | 463 | 0.0 | 726 |
Msa0092050 | MtrunA17_Chr1g0187571 | 71.304 | 460 | 115 | 6 | 1 | 446 | 2 | 458 | 0.0 | 641 |
Msa0092050 | MtrunA17_Chr1g0166821 | 71.145 | 454 | 120 | 5 | 1 | 446 | 2 | 452 | 0.0 | 632 |
Msa0092050 | MtrunA17_Chr2g0329981 | 65.358 | 433 | 114 | 8 | 1 | 425 | 1 | 405 | 0.0 | 551 |
Msa0092050 | MtrunA17_Chr4g0071031 | 72.222 | 360 | 87 | 4 | 1 | 347 | 1 | 360 | 0.0 | 545 |
Msa0092050 | MtrunA17_Chr8g0342821 | 59.958 | 472 | 154 | 10 | 1 | 444 | 1 | 465 | 0.0 | 540 |
Msa0092050 | MtrunA17_Chr2g0299661 | 55.274 | 474 | 176 | 6 | 1 | 447 | 1 | 465 | 0.0 | 516 |
Msa0092050 | MtrunA17_Chr6g0486611 | 76.797 | 306 | 71 | 0 | 1 | 306 | 1 | 306 | 2.51e-179 | 508 |
Msa0092050 | MtrunA17_Chr1g0167261 | 66.935 | 372 | 90 | 4 | 1 | 370 | 2 | 342 | 6.97e-178 | 501 |
Msa0092050 | MtrunA17_Chr8g0390211 | 77.181 | 298 | 68 | 0 | 1 | 298 | 1 | 298 | 3.13e-177 | 502 |
Msa0092050 | MtrunA17_Chr3g0140071 | 55.582 | 421 | 171 | 4 | 1 | 417 | 1 | 409 | 3.06e-164 | 469 |
Msa0092050 | MtrunA17_Chr1g0146151 | 70.508 | 295 | 87 | 0 | 1 | 295 | 1 | 295 | 1.34e-162 | 465 |
Msa0092050 | MtrunA17_Chr7g0214531 | 37.716 | 289 | 161 | 6 | 5 | 277 | 31 | 316 | 9.44e-58 | 200 |
Msa0092050 | MtrunA17_Chr3g0140431 | 37.276 | 279 | 162 | 6 | 5 | 273 | 32 | 307 | 6.90e-55 | 192 |
Msa0092050 | MtrunA17_Chr1g0146301 | 36.918 | 279 | 163 | 6 | 5 | 273 | 118 | 393 | 3.86e-54 | 191 |
Msa0092050 | MtrunA17_Chr1g0213321 | 36.268 | 284 | 167 | 6 | 5 | 277 | 113 | 393 | 1.13e-53 | 190 |
Msa0092050 | MtrunA17_Chr7g0253211 | 36.525 | 282 | 163 | 5 | 9 | 277 | 324 | 602 | 6.49e-53 | 190 |
Msa0092050 | MtrunA17_Chr8g0340491 | 36.170 | 282 | 158 | 7 | 9 | 273 | 128 | 404 | 9.78e-50 | 179 |
Msa0092050 | MtrunA17_Chr5g0405421 | 26.818 | 220 | 144 | 6 | 8 | 219 | 98 | 308 | 3.11e-14 | 74.7 |
Msa0092050 | MtrunA17_Chr7g0267751 | 29.167 | 216 | 131 | 9 | 9 | 215 | 135 | 337 | 9.08e-14 | 73.6 |
Msa0092050 | MtrunA17_Chr4g0072831 | 32.680 | 153 | 71 | 6 | 7 | 153 | 8 | 134 | 2.91e-13 | 70.5 |
Msa0092050 | MtrunA17_Chr3g0107051 | 29.817 | 218 | 133 | 9 | 5 | 214 | 17 | 222 | 8.51e-13 | 70.1 |
Msa0092050 | MtrunA17_Chr7g0245031 | 34.375 | 128 | 70 | 4 | 109 | 236 | 252 | 365 | 1.92e-12 | 68.9 |
Msa0092050 | MtrunA17_Chr8g0346071 | 30.415 | 217 | 126 | 9 | 7 | 213 | 15 | 216 | 1.01e-11 | 66.6 |
Msa0092050 | MtrunA17_Chr7g0267771 | 26.522 | 230 | 142 | 8 | 9 | 228 | 88 | 300 | 1.06e-11 | 66.6 |
Msa0092050 | MtrunA17_Chr5g0444171 | 27.488 | 211 | 137 | 6 | 9 | 213 | 92 | 292 | 2.81e-11 | 65.5 |
Msa0092050 | MtrunA17_Chr8g0374701 | 27.948 | 229 | 139 | 10 | 6 | 219 | 122 | 339 | 3.10e-11 | 65.5 |
Msa0092050 | MtrunA17_Chr1g0201571 | 28.302 | 212 | 127 | 9 | 9 | 209 | 126 | 323 | 3.46e-11 | 65.5 |
Msa0092050 | MtrunA17_Chr1g0157131 | 27.652 | 264 | 158 | 10 | 4 | 251 | 69 | 315 | 5.09e-11 | 64.7 |
Msa0092050 | MtrunA17_Chr4g0075541 | 25.887 | 282 | 179 | 10 | 11 | 281 | 89 | 351 | 5.17e-11 | 64.3 |
Msa0092050 | MtrunA17_Chr8g0387671 | 29.437 | 231 | 134 | 11 | 9 | 228 | 66 | 278 | 6.83e-11 | 64.3 |
Msa0092050 | MtrunA17_Chr3g0107011 | 26.070 | 257 | 137 | 10 | 3 | 236 | 8 | 234 | 8.99e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0092050 | AT4G28540.1 | 72.594 | 478 | 98 | 11 | 1 | 448 | 5 | 479 | 0.0 | 679 |
Msa0092050 | AT4G14340.1 | 70.861 | 453 | 116 | 7 | 1 | 446 | 7 | 450 | 0.0 | 642 |
Msa0092050 | AT3G23340.1 | 71.938 | 449 | 110 | 7 | 1 | 446 | 1 | 436 | 0.0 | 642 |
Msa0092050 | AT1G03930.1 | 68.354 | 474 | 121 | 8 | 1 | 448 | 1 | 471 | 0.0 | 626 |
Msa0092050 | AT5G43320.1 | 67.579 | 475 | 124 | 7 | 1 | 446 | 1 | 474 | 0.0 | 625 |
Msa0092050 | AT3G23340.2 | 69.265 | 449 | 108 | 8 | 1 | 446 | 1 | 422 | 0.0 | 608 |
Msa0092050 | AT1G04440.1 | 66.164 | 464 | 137 | 8 | 1 | 446 | 1 | 462 | 0.0 | 599 |
Msa0092050 | AT5G44100.1 | 82.000 | 350 | 58 | 2 | 1 | 346 | 1 | 349 | 0.0 | 597 |
Msa0092050 | AT5G44100.2 | 82.000 | 350 | 58 | 2 | 1 | 346 | 1 | 349 | 0.0 | 597 |
Msa0092050 | AT4G14340.2 | 83.537 | 328 | 53 | 1 | 1 | 328 | 7 | 333 | 0.0 | 576 |
Msa0092050 | AT5G43320.2 | 81.024 | 332 | 60 | 1 | 1 | 329 | 1 | 332 | 0.0 | 565 |
Msa0092050 | AT5G43320.3 | 81.024 | 332 | 60 | 1 | 1 | 329 | 1 | 332 | 0.0 | 565 |
Msa0092050 | AT1G72710.1 | 75.152 | 330 | 79 | 2 | 1 | 328 | 1 | 329 | 0.0 | 536 |
Msa0092050 | AT4G26100.1 | 80.872 | 298 | 57 | 0 | 1 | 298 | 1 | 298 | 0.0 | 535 |
Msa0092050 | AT5G57015.1 | 80.537 | 298 | 58 | 0 | 1 | 298 | 1 | 298 | 0.0 | 529 |
Msa0092050 | AT2G19470.1 | 73.556 | 329 | 84 | 3 | 1 | 326 | 1 | 329 | 0.0 | 524 |
Msa0092050 | AT4G28880.3 | 71.160 | 319 | 92 | 0 | 1 | 319 | 1 | 319 | 7.65e-176 | 499 |
Msa0092050 | AT4G28880.2 | 71.160 | 319 | 92 | 0 | 1 | 319 | 1 | 319 | 7.65e-176 | 499 |
Msa0092050 | AT4G28880.1 | 71.160 | 319 | 92 | 0 | 1 | 319 | 1 | 319 | 7.65e-176 | 499 |
Msa0092050 | AT4G28880.4 | 71.160 | 319 | 92 | 0 | 1 | 319 | 1 | 319 | 7.65e-176 | 499 |
Msa0092050 | AT4G28860.2 | 70.533 | 319 | 94 | 0 | 1 | 319 | 1 | 319 | 1.08e-174 | 494 |
Msa0092050 | AT4G28860.1 | 74.832 | 298 | 75 | 0 | 1 | 298 | 1 | 298 | 2.02e-174 | 495 |
Msa0092050 | AT4G08800.1 | 66.216 | 296 | 68 | 2 | 1 | 296 | 1 | 264 | 3.73e-145 | 416 |
Msa0092050 | AT2G25760.2 | 39.286 | 280 | 155 | 4 | 9 | 273 | 107 | 386 | 7.33e-59 | 204 |
Msa0092050 | AT2G25760.1 | 38.929 | 280 | 153 | 5 | 9 | 273 | 107 | 383 | 3.87e-56 | 197 |
Msa0092050 | AT3G13670.1 | 35.986 | 289 | 166 | 6 | 5 | 277 | 131 | 416 | 3.68e-53 | 189 |
Msa0092050 | AT5G18190.2 | 35.461 | 282 | 166 | 5 | 9 | 277 | 130 | 408 | 1.84e-52 | 187 |
Msa0092050 | AT5G18190.1 | 35.461 | 282 | 166 | 5 | 9 | 277 | 130 | 408 | 1.84e-52 | 187 |
Msa0092050 | AT3G03940.1 | 35.461 | 282 | 166 | 5 | 9 | 277 | 140 | 418 | 4.67e-52 | 186 |
Msa0092050 | AT3G50530.1 | 28.319 | 226 | 141 | 7 | 5 | 219 | 144 | 359 | 1.10e-13 | 73.6 |
Msa0092050 | AT5G21326.1 | 29.870 | 231 | 113 | 10 | 7 | 214 | 11 | 215 | 3.38e-13 | 71.6 |
Msa0092050 | AT3G20410.2 | 28.384 | 229 | 143 | 8 | 9 | 230 | 91 | 305 | 5.47e-12 | 68.2 |
Msa0092050 | AT3G20410.1 | 28.384 | 229 | 143 | 8 | 9 | 230 | 91 | 305 | 5.47e-12 | 68.2 |
Msa0092050 | AT2G17890.1 | 25.909 | 220 | 146 | 7 | 8 | 219 | 107 | 317 | 5.77e-12 | 68.2 |
Msa0092050 | AT1G30270.1 | 27.386 | 241 | 147 | 10 | 7 | 236 | 29 | 252 | 6.34e-12 | 67.8 |
Msa0092050 | AT1G30270.2 | 27.386 | 241 | 147 | 10 | 7 | 236 | 29 | 252 | 6.50e-12 | 67.8 |
Msa0092050 | AT2G38910.1 | 28.063 | 253 | 144 | 10 | 1 | 230 | 119 | 356 | 1.07e-11 | 67.4 |
Msa0092050 | AT3G50530.2 | 26.104 | 249 | 148 | 9 | 5 | 219 | 144 | 390 | 1.42e-11 | 67.0 |
Msa0092050 | AT4G36070.2 | 25.000 | 220 | 148 | 6 | 8 | 219 | 70 | 280 | 1.47e-11 | 67.0 |
Msa0092050 | AT4G36070.1 | 25.000 | 220 | 148 | 6 | 8 | 219 | 70 | 280 | 1.80e-11 | 66.6 |
Msa0092050 | AT3G61960.2 | 24.843 | 318 | 204 | 10 | 7 | 318 | 8 | 296 | 1.89e-11 | 66.6 |
Msa0092050 | AT3G61960.1 | 24.843 | 318 | 204 | 10 | 7 | 318 | 8 | 296 | 2.02e-11 | 66.6 |
Msa0092050 | AT4G31170.7 | 28.319 | 226 | 128 | 8 | 8 | 218 | 130 | 336 | 2.86e-11 | 65.5 |
Msa0092050 | AT4G31170.6 | 28.319 | 226 | 128 | 8 | 8 | 218 | 130 | 336 | 2.86e-11 | 65.5 |
Msa0092050 | AT4G31170.5 | 28.319 | 226 | 128 | 8 | 8 | 218 | 130 | 336 | 2.86e-11 | 65.5 |
Msa0092050 | AT4G31170.1 | 28.319 | 226 | 128 | 8 | 8 | 218 | 130 | 336 | 2.86e-11 | 65.5 |
Msa0092050 | AT4G31170.2 | 28.319 | 226 | 128 | 8 | 8 | 218 | 130 | 336 | 2.86e-11 | 65.5 |
Msa0092050 | AT4G31170.3 | 28.319 | 226 | 128 | 8 | 8 | 218 | 130 | 336 | 2.86e-11 | 65.5 |
Msa0092050 | AT4G31170.8 | 28.319 | 226 | 128 | 8 | 8 | 218 | 130 | 336 | 2.86e-11 | 65.5 |
Msa0092050 | AT1G29230.1 | 27.397 | 219 | 141 | 9 | 2 | 213 | 67 | 274 | 2.91e-11 | 65.9 |
Msa0092050 | AT1G01140.1 | 28.689 | 244 | 140 | 13 | 7 | 236 | 17 | 240 | 3.12e-11 | 65.5 |
Msa0092050 | AT1G01140.3 | 28.689 | 244 | 140 | 13 | 7 | 236 | 17 | 240 | 3.32e-11 | 65.5 |
Msa0092050 | AT1G50700.3 | 25.597 | 293 | 192 | 10 | 9 | 293 | 73 | 347 | 4.36e-11 | 65.1 |
Msa0092050 | AT1G76040.3 | 27.586 | 232 | 147 | 8 | 9 | 233 | 112 | 329 | 4.65e-11 | 65.1 |
Msa0092050 | AT1G76040.2 | 28.037 | 214 | 136 | 7 | 9 | 215 | 112 | 314 | 4.68e-11 | 65.5 |
Msa0092050 | AT4G23650.1 | 29.167 | 216 | 131 | 7 | 9 | 215 | 78 | 280 | 6.36e-11 | 64.7 |
Msa0092050 | AT1G50700.1 | 25.597 | 293 | 192 | 10 | 9 | 293 | 73 | 347 | 6.56e-11 | 64.7 |
Msa0092050 | AT4G04720.2 | 23.052 | 308 | 201 | 9 | 2 | 293 | 66 | 353 | 8.09e-11 | 64.3 |
Msa0092050 | AT4G04720.1 | 23.052 | 308 | 201 | 9 | 2 | 293 | 66 | 353 | 8.09e-11 | 64.3 |
Msa0092050 | AT1G50700.2 | 25.357 | 280 | 184 | 9 | 9 | 281 | 73 | 334 | 8.96e-11 | 64.3 |
Find 171 sgRNAs with CRISPR-Local
Find 488 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGTTCTTCATTTCTAAATTT+TGG | 0.111875 | 1_2:-74266273 | Msa0092050:three_prime_UTR |
TTTAAACTTGGAAGGAAAAT+TGG | 0.141980 | 1_2:-74272827 | Msa0092050:CDS |
GTTCTTGATATTGATTATTC+TGG | 0.171244 | 1_2:-74273184 | Msa0092050:five_prime_UTR |
AATCAAGATTAAATGCAAAT+TGG | 0.204360 | 1_2:+74273046 | None:intergenic |
TAGAATTTGCGCGGTTCCTC+TGG | 0.208716 | 1_2:+74267019 | None:intergenic |
CAAAAGTAGTTTCACAAGTT+TGG | 0.231854 | 1_2:+74273316 | None:intergenic |
GAATGGTCACCTGAGGAATT+TGG | 0.252408 | 1_2:+74266472 | None:intergenic |
TTGTTGGGTTTGGTGAATTT+TGG | 0.279061 | 1_2:-74273007 | Msa0092050:five_prime_UTR |
CCGACTTCAAAGTGAATTTC+CGG | 0.284081 | 1_2:+74271968 | None:intergenic |
TGGGATTTCAAGAAGCCTTA+TGG | 0.303360 | 1_2:-74266244 | Msa0092050:three_prime_UTR |
ATCAAGATTAAATGCAAATT+GGG | 0.306208 | 1_2:+74273047 | None:intergenic |
ACATACCTTCTCGAATAAAA+AGG | 0.309439 | 1_2:+74267579 | None:intergenic |
CTCTTTAAATATGAATAATC+TGG | 0.309704 | 1_2:+74267614 | None:intergenic |
CAAGTCATAATTACCTCTAT+TGG | 0.319914 | 1_2:+74268927 | None:intergenic |
AAAATTGGGAGTGGTTCTTT+TGG | 0.322856 | 1_2:-74272812 | Msa0092050:CDS |
ATTTAAAGCAACGAATGATA+TGG | 0.325797 | 1_2:-74265906 | Msa0092050:three_prime_UTR |
TTCAGTTGGGAGAGAGATTC+GGG | 0.329420 | 1_2:-74267076 | Msa0092050:intron |
TATTCTGGGATGATTGGTTT+TGG | 0.336900 | 1_2:-74273169 | Msa0092050:five_prime_UTR |
CTGTTGAAAATCAATCAATT+TGG | 0.339043 | 1_2:-74272946 | Msa0092050:five_prime_UTR |
AAACAAAAGATTCAAGTTCA+TGG | 0.356941 | 1_2:-74266217 | Msa0092050:three_prime_UTR |
CAACACAATTCAACTCGATA+TGG | 0.357353 | 1_2:-74266529 | Msa0092050:CDS |
CATAGCGTGCCGTGCCTGTA+AGG | 0.359631 | 1_2:+74269321 | None:intergenic |
AATTCCTCAGGTGACCATTC+TGG | 0.359748 | 1_2:-74266469 | Msa0092050:CDS |
ATTTATTCAATTATTGTAAC+CGG | 0.360177 | 1_2:-74271987 | Msa0092050:CDS |
GTGCTAATGTATTTCTTAAG+AGG | 0.362458 | 1_2:-74269110 | Msa0092050:CDS |
TTAAACTTGGAAGGAAAATT+GGG | 0.363410 | 1_2:-74272826 | Msa0092050:CDS |
TCCAGCCCTCAGTCCTTGCC+AGG | 0.368539 | 1_2:+74268998 | None:intergenic |
TTCTTGATATTGATTATTCT+GGG | 0.370586 | 1_2:-74273183 | Msa0092050:five_prime_UTR |
AGGGAAAATAAGAACCTTAC+AGG | 0.372840 | 1_2:-74269335 | Msa0092050:CDS |
TTTCAGTTGGGAGAGAGATT+CGG | 0.379707 | 1_2:-74267077 | Msa0092050:intron |
ATTGATTATTCTGGGATGAT+TGG | 0.385224 | 1_2:-74273175 | Msa0092050:five_prime_UTR |
GTCATGGTCATCGACCTTCT+TGG | 0.387600 | 1_2:-74272024 | Msa0092050:CDS |
CGACCTTCTTGGACCCAGTC+TGG | 0.390528 | 1_2:-74272013 | Msa0092050:CDS |
TTTGAATTTGTCCACAATCA+AGG | 0.390569 | 1_2:-74272905 | Msa0092050:five_prime_UTR |
TTGGGGTGAAGGAATGTAGT+TGG | 0.395154 | 1_2:-74273141 | Msa0092050:five_prime_UTR |
ATGATTCTTCAAGGAGGAAC+TGG | 0.404829 | 1_2:-74272090 | Msa0092050:CDS |
ACCTCAACGAACGGCAATAG+TGG | 0.405356 | 1_2:+74267648 | None:intergenic |
CCTCAACTCCAAACCATTTG+AGG | 0.409202 | 1_2:+74272058 | None:intergenic |
CGGAGGAAGTGGGTCTTGTT+TGG | 0.413082 | 1_2:+74273346 | None:intergenic |
GCTTTGAGCTCCTCACTATC+AGG | 0.414666 | 1_2:-74266321 | Msa0092050:CDS |
GAGATTCGGGAGAAATTATC+TGG | 0.415618 | 1_2:-74267063 | Msa0092050:CDS |
CTCAAATGGTTTGGAGTTGA+GGG | 0.423483 | 1_2:-74272057 | Msa0092050:CDS |
TCAGCTGTTAATATACAAAC+TGG | 0.426788 | 1_2:-74272673 | Msa0092050:intron |
GCAAGTGTCAACACCCATCT+TGG | 0.433561 | 1_2:-74269299 | Msa0092050:CDS |
ATAGGGATCTTCAGACTCAT+AGG | 0.434481 | 1_2:-74269658 | Msa0092050:CDS |
TTTATCATGGATCATGTGAT+TGG | 0.443086 | 1_2:-74272857 | Msa0092050:exon |
CCTCAAATGGTTTGGAGTTG+AGG | 0.448526 | 1_2:-74272058 | Msa0092050:CDS |
TTGCCGTTCGTTGAGGTTTG+AGG | 0.451388 | 1_2:-74267642 | Msa0092050:CDS |
TGGATATGCAATGTTATTTG+TGG | 0.454735 | 1_2:-74265999 | Msa0092050:three_prime_UTR |
ATATCGAGTTGAATTGTGTT+GGG | 0.458129 | 1_2:+74266531 | None:intergenic |
ACAAAGTCGAAGGGATGATC+TGG | 0.458546 | 1_2:-74269147 | Msa0092050:CDS |
TTTCGCAAGGCCGAAGTCAA+TGG | 0.458863 | 1_2:+74269685 | None:intergenic |
ATTGAATAAATCTTCCAGAC+TGG | 0.465309 | 1_2:+74271999 | None:intergenic |
CATAAAGCACAAAAGATTCC+AGG | 0.469567 | 1_2:-74267282 | Msa0092050:intron |
AAACTGTATATGATTCTTCA+AGG | 0.471640 | 1_2:-74272099 | Msa0092050:CDS |
GTGGAAAGTTTAAACTTGGA+AGG | 0.472881 | 1_2:-74272835 | Msa0092050:CDS |
CTCCAAACCATTTGAGGTGG+GGG | 0.473526 | 1_2:+74272064 | None:intergenic |
TTGGAGATGAACGGAGGAAG+TGG | 0.485546 | 1_2:+74273335 | None:intergenic |
GGCAGGATGGCCACAAGTGG+GGG | 0.486821 | 1_2:-74266448 | Msa0092050:CDS |
ATAGTGAAGCTGTGGATGCC+TGG | 0.493685 | 1_2:+74272128 | None:intergenic |
TTGAATTTGTCCACAATCAA+GGG | 0.497388 | 1_2:-74272904 | Msa0092050:five_prime_UTR |
TCTTCCCTGGCAAGGACTGA+GGG | 0.499281 | 1_2:-74269003 | Msa0092050:CDS |
AGAAGGTATCTGTGGTGTGC+TGG | 0.499832 | 1_2:+74273277 | None:intergenic |
TTGTGGCCATCCTGCCAGAA+TGG | 0.501550 | 1_2:+74266455 | None:intergenic |
CCCTGGCAAGGACTGAGGGC+TGG | 0.502421 | 1_2:-74268999 | Msa0092050:CDS |
GTCAACACCCATCTTGGAAT+CGG | 0.505171 | 1_2:-74269293 | Msa0092050:intron |
ATCATCATAAGTCCTATGTC+TGG | 0.505727 | 1_2:+74266975 | None:intergenic |
CATATCGAGTTGAATTGTGT+TGG | 0.505789 | 1_2:+74266530 | None:intergenic |
ATTGGTGGAAAGTTTAAACT+TGG | 0.508093 | 1_2:-74272839 | Msa0092050:CDS |
TTGAATTCAGCCCTTGATTG+TGG | 0.510798 | 1_2:+74272894 | None:intergenic |
AGAGGAGGTGGCTGTTAAGC+TGG | 0.511655 | 1_2:-74272650 | Msa0092050:intron |
CAGGTGTATGCCATTGACTT+CGG | 0.512497 | 1_2:-74269695 | Msa0092050:CDS |
AGAATTTGCGCGGTTCCTCT+GGG | 0.513807 | 1_2:+74267020 | None:intergenic |
CTGGCAGGATGGCCACAAGT+GGG | 0.513957 | 1_2:-74266450 | Msa0092050:CDS |
AGGGATGATCTGGAATCTCT+TGG | 0.515030 | 1_2:-74269137 | Msa0092050:CDS |
GAAGGTATCAACTCCAATAG+AGG | 0.515426 | 1_2:-74268940 | Msa0092050:intron |
GTCTTCCCTGGCAAGGACTG+AGG | 0.516641 | 1_2:-74269004 | Msa0092050:CDS |
TCAATATCAAGAACAACAAA+GGG | 0.519549 | 1_2:+74273193 | None:intergenic |
ATCAATATCAAGAACAACAA+AGG | 0.520586 | 1_2:+74273192 | None:intergenic |
AATTGTCTGGCTTTATGTCT+CGG | 0.521040 | 1_2:+74271782 | None:intergenic |
ATCACTTACCGATTCCAAGA+TGG | 0.522339 | 1_2:+74269285 | None:intergenic |
TCCACTATTGCCGTTCGTTG+AGG | 0.522705 | 1_2:-74267649 | Msa0092050:CDS |
CAGAGTAGTGGCAGCTCTAG+AGG | 0.523385 | 1_2:-74267424 | Msa0092050:CDS |
TCACTTACCGATTCCAAGAT+GGG | 0.528445 | 1_2:+74269286 | None:intergenic |
GGGCTGAATTCAATATTTGA+AGG | 0.528537 | 1_2:-74272884 | Msa0092050:five_prime_UTR |
AGGCCCATCAGAAAATTGTC+TGG | 0.529417 | 1_2:+74271769 | None:intergenic |
AACTCCAAACCATTTGAGGT+GGG | 0.533255 | 1_2:+74272062 | None:intergenic |
TGGCAGGATGGCCACAAGTG+GGG | 0.534769 | 1_2:-74266449 | Msa0092050:CDS |
CTCTATGTGCGCCAGATGGA+CGG | 0.535759 | 1_2:+74266425 | None:intergenic |
CTTGATTTGCTTTACGTCCG+AGG | 0.536022 | 1_2:+74271749 | None:intergenic |
TTGTAACGACAGCATGGCAC+TGG | 0.538838 | 1_2:-74267336 | Msa0092050:intron |
TCAAGATTAAATGCAAATTG+GGG | 0.540099 | 1_2:+74273048 | None:intergenic |
ATCATGGATCATGTGATTGG+TGG | 0.540398 | 1_2:-74272854 | Msa0092050:CDS |
TTGAAACATCCTCATGAATG+AGG | 0.540842 | 1_2:+74273094 | None:intergenic |
TATACAAACTGGAGAGGAGG+TGG | 0.543406 | 1_2:-74272662 | Msa0092050:CDS |
AATCTTCTGAAGCAATCTGA+GGG | 0.543803 | 1_2:+74266134 | None:intergenic |
TTGAATAAATCTTCCAGACT+GGG | 0.547330 | 1_2:+74272000 | None:intergenic |
TGAATAATTCCTCATTCATG+AGG | 0.551215 | 1_2:-74273103 | Msa0092050:five_prime_UTR |
TAATGTATTTCTTAAGAGGA+AGG | 0.552033 | 1_2:-74269106 | Msa0092050:intron |
TAGTGGCAGCTCTAGAGGAC+GGG | 0.553447 | 1_2:-74267419 | Msa0092050:intron |
TCTGGCAGGATGGCCACAAG+TGG | 0.554722 | 1_2:-74266451 | Msa0092050:CDS |
GTAGTGGCAGCTCTAGAGGA+CGG | 0.557752 | 1_2:-74267420 | Msa0092050:CDS |
GTTGAATACATGCATTCAAG+AGG | 0.558652 | 1_2:-74271814 | Msa0092050:CDS |
TCATCAAAGCCAAATTCCTC+AGG | 0.559975 | 1_2:-74266481 | Msa0092050:CDS |
GAATAAGGTAGGAAAAGAGA+AGG | 0.561006 | 1_2:+74273260 | None:intergenic |
ATAAGGCTTCTTGAAATCCC+AGG | 0.563366 | 1_2:+74266246 | None:intergenic |
CAACTCCAAACCATTTGAGG+TGG | 0.572196 | 1_2:+74272061 | None:intergenic |
TCCAGGAATCTGTGAAGACC+AGG | 0.574379 | 1_2:-74272146 | Msa0092050:intron |
CCTCAGGTGACCATTCTGGC+AGG | 0.574601 | 1_2:-74266465 | Msa0092050:CDS |
TTCACAAGTTTGGAGATGAA+CGG | 0.574856 | 1_2:+74273326 | None:intergenic |
AAATCTTCTGAAGCAATCTG+AGG | 0.574956 | 1_2:+74266133 | None:intergenic |
AGGTGACCATTCTGGCAGGA+TGG | 0.577708 | 1_2:-74266461 | Msa0092050:CDS |
ACTATCAGGAAGTAATCTCA+AGG | 0.579172 | 1_2:-74266307 | Msa0092050:exon |
TGGTGTGTTCACCGTGATGA+GGG | 0.579905 | 1_2:+74266995 | None:intergenic |
CTCATAGGCACATACCGTAC+AGG | 0.580718 | 1_2:-74269643 | Msa0092050:intron |
AGACAGACTTACTAATTGAT+CGG | 0.581760 | 1_2:+74271933 | None:intergenic |
CTTGGAAGGAAAATTGGGAG+TGG | 0.582542 | 1_2:-74272821 | Msa0092050:CDS |
GGGGATCTAGAAATGATGTC+GGG | 0.584750 | 1_2:+74266154 | None:intergenic |
CTTCCAGACTGGGTCCAAGA+AGG | 0.585280 | 1_2:+74272010 | None:intergenic |
GATCACAAAACCAACCTGTA+CGG | 0.586380 | 1_2:+74269629 | None:intergenic |
GGACAAATTCAAACAGAGGA+AGG | 0.587793 | 1_2:+74272915 | None:intergenic |
GAGATTACTTCCTGATAGTG+AGG | 0.590566 | 1_2:+74266311 | None:intergenic |
CCAGCCCTCAGTCCTTGCCA+GGG | 0.593406 | 1_2:+74268999 | None:intergenic |
ACTCCAAACCATTTGAGGTG+GGG | 0.595250 | 1_2:+74272063 | None:intergenic |
TGAACTCTATGTGCGCCAGA+TGG | 0.596034 | 1_2:+74266421 | None:intergenic |
ATTTGGCTTTGATGATACCA+TGG | 0.597247 | 1_2:+74266489 | None:intergenic |
TGGTGGCAGAACAAAGTCGA+AGG | 0.597531 | 1_2:-74269157 | Msa0092050:intron |
GCTTGTTTCGTATCATACAC+AGG | 0.597643 | 1_2:+74266397 | None:intergenic |
ACGGTGAACACACCAGACAT+AGG | 0.599179 | 1_2:-74266987 | Msa0092050:CDS |
GCTCGCAATGGGTCTATGAG+AGG | 0.601655 | 1_2:-74266367 | Msa0092050:CDS |
AGGGGATCTAGAAATGATGT+CGG | 0.602938 | 1_2:+74266153 | None:intergenic |
CCGGAAATTCACTTTGAAGT+CGG | 0.603149 | 1_2:-74271968 | Msa0092050:CDS |
CTGGTGTGTTCACCGTGATG+AGG | 0.605762 | 1_2:+74266994 | None:intergenic |
AAATAATAATAATTCAGCAA+TGG | 0.606102 | 1_2:+74265819 | None:intergenic |
AACGAATGATATGGTGCTGT+AGG | 0.611429 | 1_2:-74265897 | Msa0092050:three_prime_UTR |
AGGAGCTCAAAGCTCCTCAG+AGG | 0.611695 | 1_2:+74266331 | None:intergenic |
AGGAAAAGAGAAGGTATCTG+TGG | 0.614878 | 1_2:+74273269 | None:intergenic |
ACATAGGACTTATGATGATG+TGG | 0.615199 | 1_2:-74266971 | Msa0092050:intron |
ACGACAGCATGGCACTGGCA+AGG | 0.615258 | 1_2:-74267331 | Msa0092050:intron |
ATATTAATGAATTACCATTG+AGG | 0.618281 | 1_2:-74266194 | Msa0092050:three_prime_UTR |
TTGAAGTATCCACAGAGTAG+TGG | 0.619683 | 1_2:-74267436 | Msa0092050:CDS |
TTTGACTCATAGTGAAGCTG+TGG | 0.620621 | 1_2:+74272120 | None:intergenic |
CGATAAAATCAGTGAGACGA+AGG | 0.621170 | 1_2:-74268958 | Msa0092050:CDS |
TGTCCTCAAACCTCAACGAA+CGG | 0.628598 | 1_2:+74267639 | None:intergenic |
CTATCAGGAAGTAATCTCAA+GGG | 0.630386 | 1_2:-74266306 | Msa0092050:exon |
TGGAGATGAACGGAGGAAGT+GGG | 0.631012 | 1_2:+74273336 | None:intergenic |
TCATGCCATTGTGACCTCAA+TGG | 0.631482 | 1_2:+74266180 | None:intergenic |
TGAGGGAGAGTACAATGTCA+TGG | 0.631924 | 1_2:-74272040 | Msa0092050:CDS |
AAATAAGAACCTTACAGGCA+CGG | 0.632067 | 1_2:-74269330 | Msa0092050:CDS |
GATGAGGGCTAGAATTTGCG+CGG | 0.634849 | 1_2:+74267010 | None:intergenic |
TAATATACAAACTGGAGAGG+AGG | 0.635465 | 1_2:-74272665 | Msa0092050:CDS |
TGTGGTGTGCTGGATGAAAG+AGG | 0.645151 | 1_2:+74273287 | None:intergenic |
AAGCAGTTCAAGAAGAGCCA+TGG | 0.646616 | 1_2:-74266506 | Msa0092050:CDS |
ACAGTGAATGTAGTTTAACA+AGG | 0.650280 | 1_2:-74265956 | Msa0092050:three_prime_UTR |
CTAGAGCTGCCACTACTCTG+TGG | 0.650464 | 1_2:+74267427 | None:intergenic |
TTGTGGACAAATTCAAACAG+AGG | 0.650537 | 1_2:+74272911 | None:intergenic |
AAGTATGATACAAACTCAGA+GGG | 0.655305 | 1_2:+74267671 | None:intergenic |
TGTTAATATACAAACTGGAG+AGG | 0.660638 | 1_2:-74272668 | Msa0092050:CDS |
GAAGTATGATACAAACTCAG+AGG | 0.660966 | 1_2:+74267670 | None:intergenic |
GGTGGCAGAACAAAGTCGAA+GGG | 0.669079 | 1_2:-74269156 | Msa0092050:intron |
TTGTTGAAGCATTCACCCAG+AGG | 0.669158 | 1_2:-74267035 | Msa0092050:CDS |
CAAGATTAAATGCAAATTGG+GGG | 0.673478 | 1_2:+74273049 | None:intergenic |
AATTACCATTGAGGTCACAA+TGG | 0.674062 | 1_2:-74266185 | Msa0092050:three_prime_UTR |
CCTGCCAGAATGGTCACCTG+AGG | 0.679602 | 1_2:+74266465 | None:intergenic |
GCAAATTCTAGCCCTCATCA+CGG | 0.684087 | 1_2:-74267006 | Msa0092050:CDS |
ACAAGTTTGGAGATGAACGG+AGG | 0.694451 | 1_2:+74273329 | None:intergenic |
AGCTCCTCAGAGGATCATCA+CGG | 0.696325 | 1_2:+74266341 | None:intergenic |
ATCTTCTGAAGCAATCTGAG+GGG | 0.701243 | 1_2:+74266135 | None:intergenic |
GCCACCGTGATGATCCTCTG+AGG | 0.725239 | 1_2:-74266345 | Msa0092050:CDS |
CTGTATATGATTCTTCAAGG+AGG | 0.728537 | 1_2:-74272096 | Msa0092050:CDS |
TCCTCAGAGGATCATCACGG+TGG | 0.751052 | 1_2:+74266344 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TGAATTAAAAACAAAAAAAA+GGG | + | chr1_2:74266493-74266512 | None:intergenic | 10.0% |
!! | ATGAATTAAAAACAAAAAAA+AGG | + | chr1_2:74266494-74266513 | None:intergenic | 10.0% |
!!! | TTGTTTTTAATTCATTTATT+TGG | - | chr1_2:74266499-74266518 | Msa0092050:CDS | 10.0% |
!!! | TGTTTTTAATTCATTTATTT+GGG | - | chr1_2:74266500-74266519 | Msa0092050:CDS | 10.0% |
!! | TAATCATATATAGATAATTT+AGG | + | chr1_2:74267635-74267654 | None:intergenic | 10.0% |
!! | ATTAAATATAAGAAAATCTT+GGG | - | chr1_2:74267893-74267912 | Msa0092050:intron | 10.0% |
!! | CCATAAAATAAAATAAAAAA+TGG | + | chr1_2:74269408-74269427 | None:intergenic | 10.0% |
!!! | CCATTTTTTATTTTATTTTA+TGG | - | chr1_2:74269405-74269424 | Msa0092050:intron | 10.0% |
!! | AAATGAATTATTACATTATT+AGG | - | chr1_2:74270032-74270051 | Msa0092050:intron | 10.0% |
!!! | TACTTTTCATTTTTAAATTA+CGG | - | chr1_2:74270585-74270604 | Msa0092050:intron | 10.0% |
!!! | TTTATGAAAATAACATTTTA+GGG | + | chr1_2:74271452-74271471 | None:intergenic | 10.0% |
!!! | TTTTATGAAAATAACATTTT+AGG | + | chr1_2:74271453-74271472 | None:intergenic | 10.0% |
!!! | TTTTAGATTTGTAAATAAAA+CGG | + | chr1_2:74272512-74272531 | None:intergenic | 10.0% |
!!! | TTTTATGAATTTCTAGAATT+TGG | - | chr1_2:74266676-74266695 | Msa0092050:intron | 15.0% |
!!! | ATGTTTTAAATGTTAACTTT+TGG | - | chr1_2:74266827-74266846 | Msa0092050:intron | 15.0% |
!! | ATTTATTCAATTATTGTAAC+CGG | - | chr1_2:74267261-74267280 | Msa0092050:intron | 15.0% |
!! | TAATATGGTTCTTTATATAA+TGG | - | chr1_2:74267359-74267378 | Msa0092050:intron | 15.0% |
!! | AAAACATAATAGCTTAAAAT+GGG | + | chr1_2:74267719-74267738 | None:intergenic | 15.0% |
!! | AAAAACATAATAGCTTAAAA+TGG | + | chr1_2:74267720-74267739 | None:intergenic | 15.0% |
!! | GATTAAATATAAGAAAATCT+TGG | - | chr1_2:74267892-74267911 | Msa0092050:intron | 15.0% |
!! | TATTATATTGATATTGATAG+CGG | - | chr1_2:74268482-74268501 | Msa0092050:intron | 15.0% |
!!! | TCATAGTAATATTTACTTTT+TGG | - | chr1_2:74268939-74268958 | Msa0092050:intron | 15.0% |
!!! | CATAGTAATATTTACTTTTT+GGG | - | chr1_2:74268940-74268959 | Msa0092050:intron | 15.0% |
!!! | TTTTATTTTATGGATGTTAT+AGG | - | chr1_2:74269415-74269434 | Msa0092050:intron | 15.0% |
!! | CTAAAATATTATCTACATTT+AGG | + | chr1_2:74269803-74269822 | None:intergenic | 15.0% |
!!! | ATATTTTTCACTAATCAATT+TGG | + | chr1_2:74270934-74270953 | None:intergenic | 15.0% |
!! | AAAATGACTAATAAAAACTA+AGG | - | chr1_2:74270997-74271016 | Msa0092050:intron | 15.0% |
!! | GATTATGTAATGTTATATTA+TGG | + | chr1_2:74271089-74271108 | None:intergenic | 15.0% |
!! | ATCATCATACATTAATTATT+AGG | - | chr1_2:74271106-74271125 | Msa0092050:intron | 15.0% |
!!! | TACTTTTCTTTTTCAAATTA+CGG | + | chr1_2:74271384-74271403 | None:intergenic | 15.0% |
!!! | ATTTTTAATTGCTATGAATA+TGG | + | chr1_2:74273394-74273413 | None:intergenic | 15.0% |
!! | AAATAATAATAATTCAGCAA+TGG | + | chr1_2:74273432-74273451 | None:intergenic | 15.0% |
!!! | TTTTTTGGAAAAACAGAATA+AGG | + | chr1_2:74266006-74266025 | None:intergenic | 20.0% |
!!! | TTCTTGATATTGATTATTCT+GGG | - | chr1_2:74266065-74266084 | Msa0092050:three_prime_UTR | 20.0% |
!! | ATCAAGATTAAATGCAAATT+GGG | + | chr1_2:74266204-74266223 | None:intergenic | 20.0% |
!! | AATCAAGATTAAATGCAAAT+TGG | + | chr1_2:74266205-74266224 | None:intergenic | 20.0% |
!!! | TTAGATTGTGAATTTTTGTT+GGG | - | chr1_2:74266226-74266245 | Msa0092050:three_prime_UTR | 20.0% |
!!! | GTTGATTTTTTTTTTCATGT+TGG | - | chr1_2:74266698-74266717 | Msa0092050:intron | 20.0% |
!! | GATATTATCTGAACTATTTA+GGG | - | chr1_2:74266739-74266758 | Msa0092050:intron | 20.0% |
!!! | TTTTTTTTGTTATCAGTTAG+TGG | - | chr1_2:74267013-74267032 | Msa0092050:CDS | 20.0% |
!!! | AAGCTATTATGTTTTTTCTT+TGG | - | chr1_2:74267724-74267743 | Msa0092050:intron | 20.0% |
!!! | ACAAGATTCTATCATTTTTT+CGG | + | chr1_2:74268311-74268330 | None:intergenic | 20.0% |
!!! | TCTTTATTTATATCAAAGAC+AGG | + | chr1_2:74268706-74268725 | None:intergenic | 20.0% |
!!! | TACAAAATGAAGTCTTTTAA+AGG | + | chr1_2:74269286-74269305 | None:intergenic | 20.0% |
!! | AGCAATTATTAAGCAATATA+AGG | + | chr1_2:74269699-74269718 | None:intergenic | 20.0% |
!! | AACTAAAACAATATCAAACT+TGG | - | chr1_2:74269831-74269850 | Msa0092050:intron | 20.0% |
!! | CAAAATATATTGAGATCAAT+GGG | + | chr1_2:74269868-74269887 | None:intergenic | 20.0% |
!! | ACAAAATATATTGAGATCAA+TGG | + | chr1_2:74269869-74269888 | None:intergenic | 20.0% |
!!! | ATATTTTTCTTCTTTGCTTA+GGG | - | chr1_2:74269894-74269913 | Msa0092050:intron | 20.0% |
!!! | GTTTCTTGTTTATTAGAAAT+TGG | - | chr1_2:74270430-74270449 | Msa0092050:intron | 20.0% |
!!! | ATCCAAATTATTTAAGATGA+TGG | + | chr1_2:74270744-74270763 | None:intergenic | 20.0% |
!!! | TAAAAACTAAGGTTTGTTTT+TGG | - | chr1_2:74271008-74271027 | Msa0092050:intron | 20.0% |
!!! | TGAAGGTTTTGAATTAAAAT+GGG | + | chr1_2:74271059-74271078 | None:intergenic | 20.0% |
!!! | TTGAAGGTTTTGAATTAAAA+TGG | + | chr1_2:74271060-74271079 | None:intergenic | 20.0% |
!! | TATATTATGGAAAAACTTGA+AGG | + | chr1_2:74271076-74271095 | None:intergenic | 20.0% |
!!! | TTACGTGCTTTTATAAAAAT+AGG | - | chr1_2:74271537-74271556 | Msa0092050:intron | 20.0% |
!! | CTCTTTAAATATGAATAATC+TGG | + | chr1_2:74271637-74271656 | None:intergenic | 20.0% |
!!! | TTGTTGTTTTACATTTTTGT+TGG | - | chr1_2:74271873-74271892 | Msa0092050:intron | 20.0% |
!! | TTATGTGAAAAAACATGAAA+TGG | + | chr1_2:74272402-74272421 | None:intergenic | 20.0% |
!! | ATATTTACAAATGGTAAACA+AGG | + | chr1_2:74272449-74272468 | None:intergenic | 20.0% |
!! | CTAGTACAAATATTTACAAA+TGG | + | chr1_2:74272458-74272477 | None:intergenic | 20.0% |
!!! | TGTTCTTCATTTCTAAATTT+TGG | - | chr1_2:74272975-74272994 | Msa0092050:five_prime_UTR | 20.0% |
!! | ATATTAATGAATTACCATTG+AGG | - | chr1_2:74273054-74273073 | Msa0092050:five_prime_UTR | 20.0% |
! | TCAATATCAAGAACAACAAA+GGG | + | chr1_2:74266058-74266077 | None:intergenic | 25.0% |
! | ATCAATATCAAGAACAACAA+AGG | + | chr1_2:74266059-74266078 | None:intergenic | 25.0% |
!! | GTTCTTGATATTGATTATTC+TGG | - | chr1_2:74266064-74266083 | Msa0092050:three_prime_UTR | 25.0% |
! | TCAAGATTAAATGCAAATTG+GGG | + | chr1_2:74266203-74266222 | None:intergenic | 25.0% |
!! | GTTAGATTGTGAATTTTTGT+TGG | - | chr1_2:74266225-74266244 | Msa0092050:three_prime_UTR | 25.0% |
!!! | GTTAGGATTTTTATTGATTC+AGG | - | chr1_2:74266270-74266289 | Msa0092050:three_prime_UTR | 25.0% |
! | CTGTTGAAAATCAATCAATT+TGG | - | chr1_2:74266302-74266321 | Msa0092050:exon | 25.0% |
!! | ATTTGAAGGTGATTTTATCA+TGG | - | chr1_2:74266378-74266397 | Msa0092050:CDS | 25.0% |
! | TTTAAACTTGGAAGGAAAAT+TGG | - | chr1_2:74266421-74266440 | Msa0092050:CDS | 25.0% |
! | TTAAACTTGGAAGGAAAATT+GGG | - | chr1_2:74266422-74266441 | Msa0092050:CDS | 25.0% |
!!! | TTGGTTCTAGATGTATTATT+AGG | - | chr1_2:74266717-74266736 | Msa0092050:intron | 25.0% |
! | GGATATTATCTGAACTATTT+AGG | - | chr1_2:74266738-74266757 | Msa0092050:intron | 25.0% |
! | ATATCATTTATCGAAGGAAA+TGG | - | chr1_2:74266796-74266815 | Msa0092050:intron | 25.0% |
!! | AATGTTAACTTTTGGTCAAT+AGG | - | chr1_2:74266835-74266854 | Msa0092050:intron | 25.0% |
! | AAACTGTATATGATTCTTCA+AGG | - | chr1_2:74267149-74267168 | Msa0092050:intron | 25.0% |
! | TTGGCGAAAGTTATTTAATA+TGG | - | chr1_2:74267344-74267363 | Msa0092050:intron | 25.0% |
!! | AAAAAACAAACAAAAGTGTG+AGG | + | chr1_2:74267402-74267421 | None:intergenic | 25.0% |
! | TTTAATTCCTTTGTCTATTG+TGG | - | chr1_2:74267563-74267582 | Msa0092050:intron | 25.0% |
! | TTAATTCCTTTGTCTATTGT+GGG | - | chr1_2:74267564-74267583 | Msa0092050:intron | 25.0% |
! | ACCTAGAAAAGAATTATGAT+AGG | - | chr1_2:74267661-74267680 | Msa0092050:CDS | 25.0% |
! | CCTAGAAAAGAATTATGATA+GGG | - | chr1_2:74267662-74267681 | Msa0092050:CDS | 25.0% |
!! | TGTCATATATTTTCTTGTGT+GGG | - | chr1_2:74267785-74267804 | Msa0092050:intron | 25.0% |
! | AGAGTCTAAATAGGAATAAA+TGG | - | chr1_2:74267826-74267845 | Msa0092050:intron | 25.0% |
! | TTCAGTTATTTGTGTTTGAA+AGG | - | chr1_2:74268108-74268127 | Msa0092050:intron | 25.0% |
!!! | AACATCAACTTTTTTTACCA+GGG | + | chr1_2:74268360-74268379 | None:intergenic | 25.0% |
!!! | TAACATCAACTTTTTTTACC+AGG | + | chr1_2:74268361-74268380 | None:intergenic | 25.0% |
!!! | AACTTAGGATTTTAAAGGAA+AGG | + | chr1_2:74268864-74268883 | None:intergenic | 25.0% |
! | ATGAAAATAAGCAAAATGAC+TGG | + | chr1_2:74268889-74268908 | None:intergenic | 25.0% |
!! | TATTTTCATATCACGTCTAT+TGG | - | chr1_2:74268900-74268919 | Msa0092050:intron | 25.0% |
!!! | AGTAATATTTACTTTTTGGG+AGG | - | chr1_2:74268943-74268962 | Msa0092050:CDS | 25.0% |
!!! | GTAATATTTACTTTTTGGGA+GGG | - | chr1_2:74268944-74268963 | Msa0092050:CDS | 25.0% |
! | TCAGTTTATTAATTTCATCG+TGG | - | chr1_2:74269156-74269175 | Msa0092050:intron | 25.0% |
! | ATGTTATAATTAGCACTGTA+TGG | + | chr1_2:74269190-74269209 | None:intergenic | 25.0% |
!!! | AGTCTTTTAAAGGATACAAA+CGG | + | chr1_2:74269276-74269295 | None:intergenic | 25.0% |
!! | AAAGCAATTGGTTTCTTTAA+GGG | - | chr1_2:74269321-74269340 | Msa0092050:CDS | 25.0% |
!!! | CAGTCGATTATATTTAGTTT+TGG | + | chr1_2:74269508-74269527 | None:intergenic | 25.0% |
!!! | GGTTTTGTGATCATAATTTT+AGG | - | chr1_2:74269630-74269649 | Msa0092050:intron | 25.0% |
!! | TTTGTGATCATAATTTTAGG+AGG | - | chr1_2:74269633-74269652 | Msa0092050:intron | 25.0% |
!!! | TTGTGATCATAATTTTAGGA+GGG | - | chr1_2:74269634-74269653 | Msa0092050:intron | 25.0% |
! | TTAGGTTAAGCTAAACAATT+AGG | - | chr1_2:74269664-74269683 | Msa0092050:CDS | 25.0% |
!!! | TGTTATGCCATTTTTTTTAC+TGG | - | chr1_2:74269768-74269787 | Msa0092050:intron | 25.0% |
! | GTGATTTCCAGTAAAAAAAA+TGG | + | chr1_2:74269778-74269797 | None:intergenic | 25.0% |
!! | GATATTTTTCTTCTTTGCTT+AGG | - | chr1_2:74269893-74269912 | Msa0092050:intron | 25.0% |
! | ATATACTAATTGTGTGATTG+TGG | - | chr1_2:74270071-74270090 | Msa0092050:intron | 25.0% |
! | TAATGTATTTCTTAAGAGGA+AGG | - | chr1_2:74270142-74270161 | Msa0092050:intron | 25.0% |
! | AGCCATCATCTTAAATAATT+TGG | - | chr1_2:74270739-74270758 | Msa0092050:intron | 25.0% |
!!! | CATTTTGGTCTCTAAATATA+TGG | - | chr1_2:74270827-74270846 | Msa0092050:intron | 25.0% |
! | AAGCAACTTTCAAAAATTAG+TGG | - | chr1_2:74271287-74271306 | Msa0092050:intron | 25.0% |
! | AGCAACTTTCAAAAATTAGT+GGG | - | chr1_2:74271288-74271307 | Msa0092050:intron | 25.0% |
! | AATAAATTAAGTGTGATCAG+TGG | + | chr1_2:74271339-74271358 | None:intergenic | 25.0% |
!! | TGCATTTTCCACATTATTTT+GGG | + | chr1_2:74271697-74271716 | None:intergenic | 25.0% |
!! | ATGCATTTTCCACATTATTT+TGG | + | chr1_2:74271698-74271717 | None:intergenic | 25.0% |
!! | AGTATATTTTGCTGGAAATT+CGG | - | chr1_2:74271720-74271739 | Msa0092050:intron | 25.0% |
!!! | AATTTGACTATGTTTTTGAC+TGG | - | chr1_2:74271783-74271802 | Msa0092050:CDS | 25.0% |
! | AGCTGAATAAGAATGAAATT+CGG | - | chr1_2:74272002-74272021 | Msa0092050:CDS | 25.0% |
! | GGTAAACAAGGTAAAAAAAA+GGG | + | chr1_2:74272437-74272456 | None:intergenic | 25.0% |
! | TGGTAAACAAGGTAAAAAAA+AGG | + | chr1_2:74272438-74272457 | None:intergenic | 25.0% |
!!! | ATCTTTTGTTTCTTTCCATA+AGG | + | chr1_2:74273022-74273041 | None:intergenic | 25.0% |
!! | AAACAAAAGATTCAAGTTCA+TGG | - | chr1_2:74273031-74273050 | Msa0092050:five_prime_UTR | 25.0% |
!! | ATTTAAAGCAACGAATGATA+TGG | - | chr1_2:74273342-74273361 | Msa0092050:five_prime_UTR | 25.0% |
CAAAAGTAGTTTCACAAGTT+TGG | + | chr1_2:74265935-74265954 | None:intergenic | 30.0% | |
TTGGAAAAACAGAATAAGGT+AGG | + | chr1_2:74266002-74266021 | None:intergenic | 30.0% | |
!! | ATTGATTATTCTGGGATGAT+TGG | - | chr1_2:74266073-74266092 | Msa0092050:three_prime_UTR | 30.0% |
!!! | ATGATTGGTTTTGGTTCTTT+TGG | - | chr1_2:74266088-74266107 | Msa0092050:three_prime_UTR | 30.0% |
!!! | TGATTGGTTTTGGTTCTTTT+GGG | - | chr1_2:74266089-74266108 | Msa0092050:three_prime_UTR | 30.0% |
TGAATAATTCCTCATTCATG+AGG | - | chr1_2:74266145-74266164 | Msa0092050:three_prime_UTR | 30.0% | |
CAAGATTAAATGCAAATTGG+GGG | + | chr1_2:74266202-74266221 | None:intergenic | 30.0% | |
! | TTGTGAATTTTTGTTGGGTT+TGG | - | chr1_2:74266231-74266250 | Msa0092050:three_prime_UTR | 30.0% |
!! | GTGAATTTTGGAAGAAAGTT+AGG | - | chr1_2:74266253-74266272 | Msa0092050:three_prime_UTR | 30.0% |
TTTGAATTTGTCCACAATCA+AGG | - | chr1_2:74266343-74266362 | Msa0092050:CDS | 30.0% | |
TTGAATTTGTCCACAATCAA+GGG | - | chr1_2:74266344-74266363 | Msa0092050:CDS | 30.0% | |
TTTATCATGGATCATGTGAT+TGG | - | chr1_2:74266391-74266410 | Msa0092050:CDS | 30.0% | |
ATTGGTGGAAAGTTTAAACT+TGG | - | chr1_2:74266409-74266428 | Msa0092050:CDS | 30.0% | |
TCAGCTGTTAATATACAAAC+TGG | - | chr1_2:74266575-74266594 | Msa0092050:intron | 30.0% | |
TGTTAATATACAAACTGGAG+AGG | - | chr1_2:74266580-74266599 | Msa0092050:intron | 30.0% | |
TCTTGAAATGAGATGTGAAA+TGG | - | chr1_2:74266870-74266889 | Msa0092050:intron | 30.0% | |
!! | TTTTTGTTATCAGTTAGTGG+TGG | - | chr1_2:74267016-74267035 | Msa0092050:CDS | 30.0% |
TTGAATAAATCTTCCAGACT+GGG | + | chr1_2:74267251-74267270 | None:intergenic | 30.0% | |
ATTGAATAAATCTTCCAGAC+TGG | + | chr1_2:74267252-74267271 | None:intergenic | 30.0% | |
AGACAGACTTACTAATTGAT+CGG | + | chr1_2:74267318-74267337 | None:intergenic | 30.0% | |
! | CCTCTATCAAACTTTTCAAA+AGG | + | chr1_2:74267599-74267618 | None:intergenic | 30.0% |
!! | CCTTTTGAAAAGTTTGATAG+AGG | - | chr1_2:74267596-74267615 | Msa0092050:CDS | 30.0% |
AAAAGTTTGATAGAGGAGTA+TGG | - | chr1_2:74267603-74267622 | Msa0092050:CDS | 30.0% | |
! | AAAGTTTGATAGAGGAGTAT+GGG | - | chr1_2:74267604-74267623 | Msa0092050:CDS | 30.0% |
! | CCCTATCATAATTCTTTTCT+AGG | + | chr1_2:74267665-74267684 | None:intergenic | 30.0% |
CTATAGACAAGTATAACACA+TGG | - | chr1_2:74267688-74267707 | Msa0092050:CDS | 30.0% | |
! | CTGTCATATATTTTCTTGTG+TGG | - | chr1_2:74267784-74267803 | Msa0092050:intron | 30.0% |
CATAGTTGAAGAGTCTAAAT+AGG | - | chr1_2:74267817-74267836 | Msa0092050:intron | 30.0% | |
GTATGACCTGAATATTAAGA+GGG | - | chr1_2:74267947-74267966 | Msa0092050:intron | 30.0% | |
TATGACCTGAATATTAAGAG+GGG | - | chr1_2:74267948-74267967 | Msa0092050:intron | 30.0% | |
ATATTCCCCTCTTAATATTC+AGG | + | chr1_2:74267956-74267975 | None:intergenic | 30.0% | |
GAATATTAAGAGGGGAATAT+TGG | - | chr1_2:74267956-74267975 | Msa0092050:intron | 30.0% | |
TGGAGAAAGATATAAATCGT+AGG | - | chr1_2:74268053-74268072 | Msa0092050:intron | 30.0% | |
! | ATTTCCTTCAAACTTTTGAG+AGG | + | chr1_2:74268136-74268155 | None:intergenic | 30.0% |
! | TTTAGAGATGAGAATTTTGC+AGG | - | chr1_2:74268183-74268202 | Msa0092050:intron | 30.0% |
! | TTAGAGATGAGAATTTTGCA+GGG | - | chr1_2:74268184-74268203 | Msa0092050:intron | 30.0% |
GAAAAGATATGATTGTGCAA+TGG | - | chr1_2:74268224-74268243 | Msa0092050:intron | 30.0% | |
! | TAGTTTTTGACAGAATGCAA+CGG | - | chr1_2:74268621-74268640 | Msa0092050:intron | 30.0% |
!!! | CATTTGATTCGTGGTTTTAA+TGG | - | chr1_2:74268647-74268666 | Msa0092050:intron | 30.0% |
!! | GTTTTAATGGTTGTGTAGTT+TGG | - | chr1_2:74268660-74268679 | Msa0092050:intron | 30.0% |
! | TTGTGTAGTTTGGATGATTT+TGG | - | chr1_2:74268670-74268689 | Msa0092050:intron | 30.0% |
TACCCATTATAATGAGTCTT+CGG | - | chr1_2:74268728-74268747 | Msa0092050:intron | 30.0% | |
ATGACATCAAAATACAAGCT+TGG | - | chr1_2:74268757-74268776 | Msa0092050:intron | 30.0% | |
TGGTTGAGTAACATTTGAAT+TGG | - | chr1_2:74268777-74268796 | Msa0092050:intron | 30.0% | |
! | TGGTGAACTTAGGATTTTAA+AGG | + | chr1_2:74268869-74268888 | None:intergenic | 30.0% |
CAACTCAACATTATACTCAA+GGG | + | chr1_2:74269066-74269085 | None:intergenic | 30.0% | |
TATAATTAGCACTGTATGGT+TGG | + | chr1_2:74269186-74269205 | None:intergenic | 30.0% | |
! | CAAAGCAATTGGTTTCTTTA+AGG | - | chr1_2:74269320-74269339 | Msa0092050:CDS | 30.0% |
GTGCTAATGTATTTCTTAAG+AGG | - | chr1_2:74270138-74270157 | Msa0092050:intron | 30.0% | |
CAAGTCATAATTACCTCTAT+TGG | + | chr1_2:74270324-74270343 | None:intergenic | 30.0% | |
AAAAAAAAACTGACAGATGC+AGG | + | chr1_2:74270351-74270370 | None:intergenic | 30.0% | |
AATATTTCAATCACACTCAG+TGG | - | chr1_2:74270665-74270684 | Msa0092050:intron | 30.0% | |
GATGTACAATACTAACTTAG+AGG | - | chr1_2:74270783-74270802 | Msa0092050:intron | 30.0% | |
AAGCATTCCTAAAGATGTTA+TGG | + | chr1_2:74271195-74271214 | None:intergenic | 30.0% | |
! | ATAACATCTTTAGGAATGCT+TGG | - | chr1_2:74271194-74271213 | Msa0092050:intron | 30.0% |
GCAACTTTCAAAAATTAGTG+GGG | - | chr1_2:74271289-74271308 | Msa0092050:intron | 30.0% | |
!!! | ATAACATTTTAGGGTGTGTT+TGG | + | chr1_2:74271443-74271462 | None:intergenic | 30.0% |
! | AGATTTTACATGAGACAGAA+GGG | + | chr1_2:74271491-74271510 | None:intergenic | 30.0% |
! | AAGATTTTACATGAGACAGA+AGG | + | chr1_2:74271492-74271511 | None:intergenic | 30.0% |
AAGTATGATACAAACTCAGA+GGG | + | chr1_2:74271580-74271599 | None:intergenic | 30.0% | |
ACATACCTTCTCGAATAAAA+AGG | + | chr1_2:74271672-74271691 | None:intergenic | 30.0% | |
GTATGTTACCCAAAATAATG+TGG | - | chr1_2:74271686-74271705 | Msa0092050:intron | 30.0% | |
! | ATGCATTCAGTATATTTTGC+TGG | - | chr1_2:74271712-74271731 | Msa0092050:intron | 30.0% |
! | ATCTTTTGTGCTTTATGTAC+TGG | + | chr1_2:74271963-74271982 | None:intergenic | 30.0% |
! | TTCATGCTATTTGTTTCAGT+TGG | - | chr1_2:74272158-74272177 | Msa0092050:intron | 30.0% |
! | TCATGCTATTTGTTTCAGTT+GGG | - | chr1_2:74272159-74272178 | Msa0092050:intron | 30.0% |
!! | ATATCGAGTTGAATTGTGTT+GGG | + | chr1_2:74272720-74272739 | None:intergenic | 30.0% |
! | TGGATATGCAATGTTATTTG+TGG | - | chr1_2:74273249-74273268 | Msa0092050:five_prime_UTR | 30.0% |
ACAGTGAATGTAGTTTAACA+AGG | - | chr1_2:74273292-74273311 | Msa0092050:five_prime_UTR | 30.0% | |
TTCACAAGTTTGGAGATGAA+CGG | + | chr1_2:74265925-74265944 | None:intergenic | 35.0% | |
GAATAAGGTAGGAAAAGAGA+AGG | + | chr1_2:74265991-74266010 | None:intergenic | 35.0% | |
!!! | TATTCTGGGATGATTGGTTT+TGG | - | chr1_2:74266079-74266098 | Msa0092050:three_prime_UTR | 35.0% |
!!! | GATTGGTTTTGGTTCTTTTG+GGG | - | chr1_2:74266090-74266109 | Msa0092050:three_prime_UTR | 35.0% |
TTGAAACATCCTCATGAATG+AGG | + | chr1_2:74266157-74266176 | None:intergenic | 35.0% | |
!!! | TTGTTGGGTTTGGTGAATTT+TGG | - | chr1_2:74266241-74266260 | Msa0092050:three_prime_UTR | 35.0% |
TTGTGGACAAATTCAAACAG+AGG | + | chr1_2:74266340-74266359 | None:intergenic | 35.0% | |
GGGCTGAATTCAATATTTGA+AGG | - | chr1_2:74266364-74266383 | Msa0092050:CDS | 35.0% | |
GTGGAAAGTTTAAACTTGGA+AGG | - | chr1_2:74266413-74266432 | Msa0092050:CDS | 35.0% | |
! | AAAATTGGGAGTGGTTCTTT+TGG | - | chr1_2:74266436-74266455 | Msa0092050:CDS | 35.0% |
!! | TCTTTTGGAGAGCTCTATTT+AGG | - | chr1_2:74266451-74266470 | Msa0092050:CDS | 35.0% |
TAATATACAAACTGGAGAGG+AGG | - | chr1_2:74266583-74266602 | Msa0092050:intron | 35.0% | |
CTTGCGATATCATTTATCGA+AGG | - | chr1_2:74266790-74266809 | Msa0092050:intron | 35.0% | |
! | GTTAACTTTTGGTCAATAGG+TGG | - | chr1_2:74266838-74266857 | Msa0092050:intron | 35.0% |
TCCAATTTCCAATTGTCTCA+CGG | - | chr1_2:74267064-74267083 | Msa0092050:CDS | 35.0% | |
GGTTCTGTCAAAAATATTCC+AGG | - | chr1_2:74267085-74267104 | Msa0092050:intron | 35.0% | |
CTGTATATGATTCTTCAAGG+AGG | - | chr1_2:74267152-74267171 | Msa0092050:intron | 35.0% | |
GTTGAATACATGCATTCAAG+AGG | - | chr1_2:74267434-74267453 | Msa0092050:CDS | 35.0% | |
!! | AATTGTCTGGCTTTATGTCT+CGG | + | chr1_2:74267469-74267488 | None:intergenic | 35.0% |
! | AAAGCCAGACAATTTTCTGA+TGG | - | chr1_2:74267475-74267494 | Msa0092050:intron | 35.0% |
! | AAGCCAGACAATTTTCTGAT+GGG | - | chr1_2:74267476-74267495 | Msa0092050:intron | 35.0% |
ATTGAACCCACAATAGACAA+AGG | + | chr1_2:74267573-74267592 | None:intergenic | 35.0% | |
AGACAAGTATAACACATGGT+AGG | - | chr1_2:74267692-74267711 | Msa0092050:CDS | 35.0% | |
GACAAGTATAACACATGGTA+GGG | - | chr1_2:74267693-74267712 | Msa0092050:intron | 35.0% | |
ATGTTCTTACTAGCATATCC+AGG | - | chr1_2:74267753-74267772 | Msa0092050:intron | 35.0% | |
!! | ATTTTCTTGTGTGGGTTGTA+TGG | - | chr1_2:74267793-74267812 | Msa0092050:intron | 35.0% |
GGTATGACCTGAATATTAAG+AGG | - | chr1_2:74267946-74267965 | Msa0092050:intron | 35.0% | |
TATTAAGAGGGGAATATTGG+AGG | - | chr1_2:74267959-74267978 | Msa0092050:intron | 35.0% | |
CATATTAATGCCACAACACA+AGG | - | chr1_2:74267983-74268002 | Msa0092050:intron | 35.0% | |
CTTGGTATGATAGATTCAAG+GGG | + | chr1_2:74268022-74268041 | None:intergenic | 35.0% | |
GCTTGGTATGATAGATTCAA+GGG | + | chr1_2:74268023-74268042 | None:intergenic | 35.0% | |
! | TTCAAGTGAGTTGGATGAAA+TGG | - | chr1_2:74268077-74268096 | Msa0092050:intron | 35.0% |
AAACACTTGACTTCTCTTGT+TGG | + | chr1_2:74268165-74268184 | None:intergenic | 35.0% | |
! | TAGAGATGAGAATTTTGCAG+GGG | - | chr1_2:74268185-74268204 | Msa0092050:intron | 35.0% |
! | TGTAAATTCGTAGTCTTGAC+AGG | + | chr1_2:74268257-74268276 | None:intergenic | 35.0% |
! | TGTTTTTCCTACTCTCTCTT+GGG | + | chr1_2:74268281-74268300 | None:intergenic | 35.0% |
AGAATCTTGTCTAACATGTG+AGG | - | chr1_2:74268321-74268340 | Msa0092050:intron | 35.0% | |
TGCTTGATTGCACTATGTAA+CGG | + | chr1_2:74268542-74268561 | None:intergenic | 35.0% | |
TGCCGAAGACTCATTATAAT+GGG | + | chr1_2:74268733-74268752 | None:intergenic | 35.0% | |
ATGCCGAAGACTCATTATAA+TGG | + | chr1_2:74268734-74268753 | None:intergenic | 35.0% | |
GAAAAACTCAAGGACAAACA+TGG | + | chr1_2:74268816-74268835 | None:intergenic | 35.0% | |
GAGTACTCTTGAAAAACTCA+AGG | + | chr1_2:74268826-74268845 | None:intergenic | 35.0% | |
AGCGTAAGTCATTGAACTAA+AGG | + | chr1_2:74268979-74268998 | None:intergenic | 35.0% | |
TTTCCTAAATTTGTCGTGCA+GGG | + | chr1_2:74269032-74269051 | None:intergenic | 35.0% | |
ATTTCCTAAATTTGTCGTGC+AGG | + | chr1_2:74269033-74269052 | None:intergenic | 35.0% | |
CCAACTCAACATTATACTCA+AGG | + | chr1_2:74269067-74269086 | None:intergenic | 35.0% | |
CCTTGAGTATAATGTTGAGT+TGG | - | chr1_2:74269064-74269083 | Msa0092050:intron | 35.0% | |
! | TTTGACATGTGCACACATTT+TGG | - | chr1_2:74269109-74269128 | Msa0092050:CDS | 35.0% |
! | CATTTTATCGTGTTAACGCT+AGG | + | chr1_2:74269239-74269258 | None:intergenic | 35.0% |
GGATACAAACGGTTAAGTTT+AGG | + | chr1_2:74269265-74269284 | None:intergenic | 35.0% | |
! | TCATTTTGTAGTCTCCTTGT+TGG | - | chr1_2:74269296-74269315 | Msa0092050:CDS | 35.0% |
! | CAATTGGTTTCTTTAAGGGT+GGG | - | chr1_2:74269325-74269344 | Msa0092050:CDS | 35.0% |
!!! | GATCCCTATATTTTTTCGCA+AGG | + | chr1_2:74269579-74269598 | None:intergenic | 35.0% |
!! | TTTTAGGAGGGAGCAATATT+AGG | - | chr1_2:74269646-74269665 | Msa0092050:CDS | 35.0% |
TGAGATCAATGGGAATTTGT+GGG | + | chr1_2:74269858-74269877 | None:intergenic | 35.0% | |
TTGAGATCAATGGGAATTTG+TGG | + | chr1_2:74269859-74269878 | None:intergenic | 35.0% | |
AGGGAAAATAAGAACCTTAC+AGG | - | chr1_2:74269913-74269932 | Msa0092050:intron | 35.0% | |
AAATAAGAACCTTACAGGCA+CGG | - | chr1_2:74269918-74269937 | Msa0092050:intron | 35.0% | |
! | CGGTAAGTGATATTTTATGC+TGG | - | chr1_2:74269975-74269994 | Msa0092050:intron | 35.0% |
!! | ATGCTGGTTTGTTACTTTCT+CGG | - | chr1_2:74269991-74270010 | Msa0092050:intron | 35.0% |
TACTAATTGTGTGATTGTGG+TGG | - | chr1_2:74270074-74270093 | Msa0092050:intron | 35.0% | |
ATGCAATAGTGCTCAATAAC+TGG | + | chr1_2:74270410-74270429 | None:intergenic | 35.0% | |
CAGTTGAATGCAGGAAATAT+AGG | + | chr1_2:74270503-74270522 | None:intergenic | 35.0% | |
CATTCAACTGTTAGCACTTA+GGG | - | chr1_2:74270513-74270532 | Msa0092050:intron | 35.0% | |
TAGCCAGAAACTTTGAATAG+TGG | - | chr1_2:74270690-74270709 | Msa0092050:intron | 35.0% | |
AGCCAGAAACTTTGAATAGT+GGG | - | chr1_2:74270691-74270710 | Msa0092050:intron | 35.0% | |
!! | AGCCAAGCGTTTTTGTTTAA+AGG | - | chr1_2:74271167-74271186 | Msa0092050:intron | 35.0% |
AGCCTTTAAACAAAAACGCT+TGG | + | chr1_2:74271172-74271191 | None:intergenic | 35.0% | |
AAAGGCTCCATAACATCTTT+AGG | - | chr1_2:74271185-74271204 | Msa0092050:intron | 35.0% | |
AAATTAAGTGTGATCAGTGG+CGG | + | chr1_2:74271336-74271355 | None:intergenic | 35.0% | |
GAAGTATGATACAAACTCAG+AGG | + | chr1_2:74271581-74271600 | None:intergenic | 35.0% | |
CTTCTCGAATAAAAAGGTCT+CGG | + | chr1_2:74271666-74271685 | None:intergenic | 35.0% | |
! | ATATTTTGCTGGAAATTCGG+TGG | - | chr1_2:74271723-74271742 | Msa0092050:intron | 35.0% |
CATAAAGCACAAAAGATTCC+AGG | - | chr1_2:74271966-74271985 | Msa0092050:CDS | 35.0% | |
ATCATCATAAGTCCTATGTC+TGG | + | chr1_2:74272276-74272295 | None:intergenic | 35.0% | |
! | ACATAGGACTTATGATGATG+TGG | - | chr1_2:74272277-74272296 | Msa0092050:intron | 35.0% |
!! | TGAGAATGTTGTTTCCTGTT+TGG | - | chr1_2:74272354-74272373 | Msa0092050:intron | 35.0% |
!! | CATATCGAGTTGAATTGTGT+TGG | + | chr1_2:74272721-74272740 | None:intergenic | 35.0% |
CAACACAATTCAACTCGATA+TGG | - | chr1_2:74272719-74272738 | Msa0092050:intron | 35.0% | |
!! | ATTTGGCTTTGATGATACCA+TGG | + | chr1_2:74272762-74272781 | None:intergenic | 35.0% |
ACTATCAGGAAGTAATCTCA+AGG | - | chr1_2:74272941-74272960 | Msa0092050:five_prime_UTR | 35.0% | |
CTATCAGGAAGTAATCTCAA+GGG | - | chr1_2:74272942-74272961 | Msa0092050:five_prime_UTR | 35.0% | |
!! | TTTCTAAATTTTGGCACACC+TGG | - | chr1_2:74272984-74273003 | Msa0092050:five_prime_UTR | 35.0% |
!! | TTCTAAATTTTGGCACACCT+GGG | - | chr1_2:74272985-74273004 | Msa0092050:five_prime_UTR | 35.0% |
AATTACCATTGAGGTCACAA+TGG | - | chr1_2:74273063-74273082 | Msa0092050:five_prime_UTR | 35.0% | |
!! | AATCTTCTGAAGCAATCTGA+GGG | + | chr1_2:74273117-74273136 | None:intergenic | 35.0% |
!! | AAATCTTCTGAAGCAATCTG+AGG | + | chr1_2:74273118-74273137 | None:intergenic | 35.0% |
!! | TTGAGTTGTAGCAAGTTTTG+TGG | - | chr1_2:74273229-74273248 | Msa0092050:five_prime_UTR | 35.0% |
!! | AGGAAAAGAGAAGGTATCTG+TGG | + | chr1_2:74265982-74266001 | None:intergenic | 40.0% |
!!! | TTTTGGTTCTTTTGGGGTGA+AGG | - | chr1_2:74266096-74266115 | Msa0092050:three_prime_UTR | 40.0% |
GGACAAATTCAAACAGAGGA+AGG | + | chr1_2:74266336-74266355 | None:intergenic | 40.0% | |
TTGAATTCAGCCCTTGATTG+TGG | + | chr1_2:74266357-74266376 | None:intergenic | 40.0% | |
ATCATGGATCATGTGATTGG+TGG | - | chr1_2:74266394-74266413 | Msa0092050:CDS | 40.0% | |
TTGGTCAATAGGTGGATGAT+TGG | - | chr1_2:74266846-74266865 | Msa0092050:intron | 40.0% | |
AGCTGCAAAACAGAATTGTG+AGG | + | chr1_2:74266910-74266929 | None:intergenic | 40.0% | |
ACCGTGAGACAATTGGAAAT+TGG | + | chr1_2:74267068-74267087 | None:intergenic | 40.0% | |
TTTGACTCATAGTGAAGCTG+TGG | + | chr1_2:74267131-74267150 | None:intergenic | 40.0% | |
ATGATTCTTCAAGGAGGAAC+TGG | - | chr1_2:74267158-74267177 | Msa0092050:intron | 40.0% | |
! | AACTCCAAACCATTTGAGGT+GGG | + | chr1_2:74267189-74267208 | None:intergenic | 40.0% |
! | CTCAAATGGTTTGGAGTTGA+GGG | - | chr1_2:74267191-74267210 | Msa0092050:intron | 40.0% |
CCGACTTCAAAGTGAATTTC+CGG | + | chr1_2:74267283-74267302 | None:intergenic | 40.0% | |
!! | CCGGAAATTCACTTTGAAGT+CGG | - | chr1_2:74267280-74267299 | Msa0092050:intron | 40.0% |
AGTAAGTCTGTCTGTCAAGT+TGG | - | chr1_2:74267325-74267344 | Msa0092050:CDS | 40.0% | |
TTCTTACTAGCATATCCAGG+AGG | - | chr1_2:74267756-74267775 | Msa0092050:intron | 40.0% | |
! | ACATTTGTTGAGTCCCACAT+TGG | - | chr1_2:74267919-74267938 | Msa0092050:intron | 40.0% |
GGTCATACCATATCCAATGT+GGG | + | chr1_2:74267935-74267954 | None:intergenic | 40.0% | |
AGGTCATACCATATCCAATG+TGG | + | chr1_2:74267936-74267955 | None:intergenic | 40.0% | |
CGCTTGGTATGATAGATTCA+AGG | + | chr1_2:74268024-74268043 | None:intergenic | 40.0% | |
ATCGTAGGATTCAAGTGAGT+TGG | - | chr1_2:74268068-74268087 | Msa0092050:intron | 40.0% | |
GGTACCTCTCAAAAGTTTGA+AGG | - | chr1_2:74268129-74268148 | Msa0092050:intron | 40.0% | |
TTTACAACCCAAGAGAGAGT+AGG | - | chr1_2:74268271-74268290 | Msa0092050:intron | 40.0% | |
! | GTGTTTTTCCTACTCTCTCT+TGG | + | chr1_2:74268282-74268301 | None:intergenic | 40.0% |
! | CTGTTGCTCAGTTCTTTTCA+AGG | + | chr1_2:74268388-74268407 | None:intergenic | 40.0% |
TCAAGGACAAACATGGAAAC+AGG | + | chr1_2:74268809-74268828 | None:intergenic | 40.0% | |
!! | GGATTTTAAAGGAAAGGTCC+AGG | + | chr1_2:74268858-74268877 | None:intergenic | 40.0% |
GCAAAATGACTGGTGAACTT+AGG | + | chr1_2:74268879-74268898 | None:intergenic | 40.0% | |
GCATGCAAGTGACTTTATGT+TGG | - | chr1_2:74269131-74269150 | Msa0092050:CDS | 40.0% | |
TCCTTGTTGGTCAAAGCAAT+TGG | - | chr1_2:74269309-74269328 | Msa0092050:CDS | 40.0% | |
ACCAATTGCTTTGACCAACA+AGG | + | chr1_2:74269313-74269332 | None:intergenic | 40.0% | |
! | GCAATTGGTTTCTTTAAGGG+TGG | - | chr1_2:74269324-74269343 | Msa0092050:CDS | 40.0% |
GGTGGGAATTTCTTAATCGT+TGG | - | chr1_2:74269342-74269361 | Msa0092050:intron | 40.0% | |
CACACTCTGTATCTCATTTC+AGG | - | chr1_2:74269534-74269553 | Msa0092050:intron | 40.0% | |
TCGGCCTTGCGAAAAAATAT+AGG | - | chr1_2:74269572-74269591 | Msa0092050:intron | 40.0% | |
CGGCCTTGCGAAAAAATATA+GGG | - | chr1_2:74269573-74269592 | Msa0092050:intron | 40.0% | |
ATAGGGATCTTCAGACTCAT+AGG | - | chr1_2:74269590-74269609 | Msa0092050:intron | 40.0% | |
GATCACAAAACCAACCTGTA+CGG | + | chr1_2:74269622-74269641 | None:intergenic | 40.0% | |
TGGCATAACAGCCTGTTAAA+GGG | + | chr1_2:74269758-74269777 | None:intergenic | 40.0% | |
ATGGCATAACAGCCTGTTAA+AGG | + | chr1_2:74269759-74269778 | None:intergenic | 40.0% | |
!! | TCACTTACCGATTCCAAGAT+GGG | + | chr1_2:74269965-74269984 | None:intergenic | 40.0% |
!! | ATCACTTACCGATTCCAAGA+TGG | + | chr1_2:74269966-74269985 | None:intergenic | 40.0% |
!! | GGTTTGTTACTTTCTCGGTT+AGG | - | chr1_2:74269996-74270015 | Msa0092050:intron | 40.0% |
!!! | TTTCCTTTTTCAGTCTTCCC+TGG | - | chr1_2:74270232-74270251 | Msa0092050:intron | 40.0% |
CGATAAAATCAGTGAGACGA+AGG | - | chr1_2:74270290-74270309 | Msa0092050:intron | 40.0% | |
!! | GAAGGTATCAACTCCAATAG+AGG | - | chr1_2:74270308-74270327 | Msa0092050:intron | 40.0% |
AAGTGCTAACAGTTGAATGC+AGG | + | chr1_2:74270512-74270531 | None:intergenic | 40.0% | |
GCATTCAACTGTTAGCACTT+AGG | - | chr1_2:74270512-74270531 | Msa0092050:intron | 40.0% | |
! | TGTGTTTGGATGGAGTGTTT+AGG | - | chr1_2:74270536-74270555 | Msa0092050:intron | 40.0% |
! | TTTGGATGGAGTGTTTAGGA+GGG | - | chr1_2:74270540-74270559 | Msa0092050:intron | 40.0% |
GCCAGAAACTTTGAATAGTG+GGG | - | chr1_2:74270692-74270711 | Msa0092050:intron | 40.0% | |
CCAGAAACTTTGAATAGTGG+GGG | - | chr1_2:74270693-74270712 | Msa0092050:intron | 40.0% | |
CTCAACACTTTCTGTTGTGT+TGG | + | chr1_2:74271141-74271160 | None:intergenic | 40.0% | |
TTTGGATTGAGGGTTTAGGA+GGG | + | chr1_2:74271425-74271444 | None:intergenic | 40.0% | |
TGTGTTTGGATTGAGGGTTT+AGG | + | chr1_2:74271429-74271448 | None:intergenic | 40.0% | |
TTAGGGTGTGTTTGGATTGA+GGG | + | chr1_2:74271435-74271454 | None:intergenic | 40.0% | |
! | TTTAGGGTGTGTTTGGATTG+AGG | + | chr1_2:74271436-74271455 | None:intergenic | 40.0% |
! | CGAGACCTTTTTATTCGAGA+AGG | - | chr1_2:74271664-74271683 | Msa0092050:intron | 40.0% |
! | TTGAAGTATCCACAGAGTAG+TGG | - | chr1_2:74271812-74271831 | Msa0092050:CDS | 40.0% |
! | TTTTTGTTGGTCGCTTACTG+TGG | - | chr1_2:74271886-74271905 | Msa0092050:intron | 40.0% |
TTTCAGTTGGGAGAGAGATT+CGG | - | chr1_2:74272171-74272190 | Msa0092050:intron | 40.0% | |
GAGATTCGGGAGAAATTATC+TGG | - | chr1_2:74272185-74272204 | Msa0092050:intron | 40.0% | |
AACGTCTTGTCAAACCAAAC+AGG | + | chr1_2:74272371-74272390 | None:intergenic | 40.0% | |
TCATCAAAGCCAAATTCCTC+AGG | - | chr1_2:74272767-74272786 | Msa0092050:intron | 40.0% | |
GCTTGTTTCGTATCATACAC+AGG | + | chr1_2:74272854-74272873 | None:intergenic | 40.0% | |
! | AAGCAACTTTTGCTCGCAAT+GGG | - | chr1_2:74272870-74272889 | Msa0092050:exon | 40.0% |
! | GAGATTACTTCCTGATAGTG+AGG | + | chr1_2:74272940-74272959 | None:intergenic | 40.0% |
ATAAGGCTTCTTGAAATCCC+AGG | + | chr1_2:74273005-74273024 | None:intergenic | 40.0% | |
TGGGATTTCAAGAAGCCTTA+TGG | - | chr1_2:74273004-74273023 | Msa0092050:five_prime_UTR | 40.0% | |
AGGGGATCTAGAAATGATGT+CGG | + | chr1_2:74273098-74273117 | None:intergenic | 40.0% | |
!! | ATCTTCTGAAGCAATCTGAG+GGG | + | chr1_2:74273116-74273135 | None:intergenic | 40.0% |
!! | AACGAATGATATGGTGCTGT+AGG | - | chr1_2:74273351-74273370 | Msa0092050:five_prime_UTR | 40.0% |
ACAAGTTTGGAGATGAACGG+AGG | + | chr1_2:74265922-74265941 | None:intergenic | 45.0% | |
TTGGGGTGAAGGAATGTAGT+TGG | - | chr1_2:74266107-74266126 | Msa0092050:three_prime_UTR | 45.0% | |
CTTGGAAGGAAAATTGGGAG+TGG | - | chr1_2:74266427-74266446 | Msa0092050:CDS | 45.0% | |
TATACAAACTGGAGAGGAGG+TGG | - | chr1_2:74266586-74266605 | Msa0092050:intron | 45.0% | |
CGCAAGCATGCTCAATTTCA+TGG | + | chr1_2:74266776-74266795 | None:intergenic | 45.0% | |
TGACAGAACCGTGAGACAAT+TGG | + | chr1_2:74267075-74267094 | None:intergenic | 45.0% | |
! | ACTCCAAACCATTTGAGGTG+GGG | + | chr1_2:74267188-74267207 | None:intergenic | 45.0% |
CAACTCCAAACCATTTGAGG+TGG | + | chr1_2:74267190-74267209 | None:intergenic | 45.0% | |
CCTCAACTCCAAACCATTTG+AGG | + | chr1_2:74267193-74267212 | None:intergenic | 45.0% | |
! | CCTCAAATGGTTTGGAGTTG+AGG | - | chr1_2:74267190-74267209 | Msa0092050:intron | 45.0% |
! | TGAGGGAGAGTACAATGTCA+TGG | - | chr1_2:74267208-74267227 | Msa0092050:intron | 45.0% |
AGGCCCATCAGAAAATTGTC+TGG | + | chr1_2:74267482-74267501 | None:intergenic | 45.0% | |
!! | GACAATTTTCTGATGGGCCT+CGG | - | chr1_2:74267482-74267501 | Msa0092050:intron | 45.0% |
!! | CTTGATTTGCTTTACGTCCG+AGG | + | chr1_2:74267502-74267521 | None:intergenic | 45.0% |
TATATGACAGCGTTACCTCC+TGG | + | chr1_2:74267774-74267793 | None:intergenic | 45.0% | |
GTTGAGTCCCACATTGGATA+TGG | - | chr1_2:74267925-74267944 | Msa0092050:intron | 45.0% | |
AAACTGTGCACCTTGTGTTG+TGG | + | chr1_2:74267996-74268015 | None:intergenic | 45.0% | |
CAACACAAGGTGCACAGTTT+CGG | - | chr1_2:74267996-74268015 | Msa0092050:intron | 45.0% | |
CATACCAAGCGACGAAGAAA+TGG | - | chr1_2:74268033-74268052 | Msa0092050:intron | 45.0% | |
TTCTCCATTTCTTCGTCGCT+TGG | + | chr1_2:74268040-74268059 | None:intergenic | 45.0% | |
! | AGAATTTTGCAGGGGATGAG+TGG | - | chr1_2:74268193-74268212 | Msa0092050:intron | 45.0% |
GAGGAGTCTAATAGAAACCC+TGG | - | chr1_2:74268340-74268359 | Msa0092050:intron | 45.0% | |
GCAGGGATCTATGCTATGAA+CGG | + | chr1_2:74269015-74269034 | None:intergenic | 45.0% | |
GATCCCTGCACGACAAATTT+AGG | - | chr1_2:74269026-74269045 | Msa0092050:intron | 45.0% | |
!! | CAGGTGTATGCCATTGACTT+CGG | - | chr1_2:74269553-74269572 | Msa0092050:intron | 45.0% |
CGCATTTGCATCCCTTTAAC+AGG | - | chr1_2:74269744-74269763 | Msa0092050:intron | 45.0% | |
GTCAACACCCATCTTGGAAT+CGG | - | chr1_2:74269955-74269974 | Msa0092050:intron | 45.0% | |
ACAAAGTCGAAGGGATGATC+TGG | - | chr1_2:74270101-74270120 | Msa0092050:intron | 45.0% | |
! | AGGGATGATCTGGAATCTCT+TGG | - | chr1_2:74270111-74270130 | Msa0092050:intron | 45.0% |
TTGCCAGGGAAGACTGAAAA+AGG | + | chr1_2:74270238-74270257 | None:intergenic | 45.0% | |
!! | TTTTTCAGTCTTCCCTGGCA+AGG | - | chr1_2:74270237-74270256 | Msa0092050:intron | 45.0% |
GTTAGCACTTAGGGTGTGTT+TGG | - | chr1_2:74270522-74270541 | Msa0092050:intron | 45.0% | |
! | GTTTGGATGGAGTGTTTAGG+AGG | - | chr1_2:74270539-74270558 | Msa0092050:intron | 45.0% |
! | TTGGATGGAGTGTTTAGGAG+GGG | - | chr1_2:74270541-74270560 | Msa0092050:intron | 45.0% |
CCCCCACTATTCAAAGTTTC+TGG | + | chr1_2:74270696-74270715 | None:intergenic | 45.0% | |
TTGGATTGAGGGTTTAGGAG+GGG | + | chr1_2:74271424-74271443 | None:intergenic | 45.0% | |
GTTTGGATTGAGGGTTTAGG+AGG | + | chr1_2:74271426-74271445 | None:intergenic | 45.0% | |
GAGACAGAAGGGAAATGAAG+AGG | + | chr1_2:74271480-74271499 | None:intergenic | 45.0% | |
TGTCCTCAAACCTCAACGAA+CGG | + | chr1_2:74271612-74271631 | None:intergenic | 45.0% | |
TGGTTGTTGTAACGACAGCA+TGG | - | chr1_2:74271906-74271925 | Msa0092050:intron | 45.0% | |
CTGTCACAGCACATATTAGC+AGG | + | chr1_2:74272031-74272050 | None:intergenic | 45.0% | |
TTCAGTTGGGAGAGAGATTC+GGG | - | chr1_2:74272172-74272191 | Msa0092050:intron | 45.0% | |
! | TTGTTGAAGCATTCACCCAG+AGG | - | chr1_2:74272213-74272232 | Msa0092050:intron | 45.0% |
GCAAATTCTAGCCCTCATCA+CGG | - | chr1_2:74272242-74272261 | Msa0092050:intron | 45.0% | |
AAGCAGTTCAAGAAGAGCCA+TGG | - | chr1_2:74272742-74272761 | Msa0092050:intron | 45.0% | |
GAATGGTCACCTGAGGAATT+TGG | + | chr1_2:74272779-74272798 | None:intergenic | 45.0% | |
AATTCCTCAGGTGACCATTC+TGG | - | chr1_2:74272779-74272798 | Msa0092050:intron | 45.0% | |
! | CAAGCAACTTTTGCTCGCAA+TGG | - | chr1_2:74272869-74272888 | Msa0092050:exon | 45.0% |
TCATGCCATTGTGACCTCAA+TGG | + | chr1_2:74273071-74273090 | None:intergenic | 45.0% | |
GGGGATCTAGAAATGATGTC+GGG | + | chr1_2:74273097-74273116 | None:intergenic | 45.0% | |
!!! | TAAAAATGATATTTTTTTTT+TGG | + | chr1_2:74266021-74266040 | None:intergenic | 5.0% |
TGGAGATGAACGGAGGAAGT+GGG | + | chr1_2:74265915-74265934 | None:intergenic | 50.0% | |
TTGGAGATGAACGGAGGAAG+TGG | + | chr1_2:74265916-74265935 | None:intergenic | 50.0% | |
TGTGGTGTGCTGGATGAAAG+AGG | + | chr1_2:74265964-74265983 | None:intergenic | 50.0% | |
!! | AGAAGGTATCTGTGGTGTGC+TGG | + | chr1_2:74265974-74265993 | None:intergenic | 50.0% |
TCCAGGAATCTGTGAAGACC+AGG | - | chr1_2:74267102-74267121 | Msa0092050:intron | 50.0% | |
ATAGTGAAGCTGTGGATGCC+TGG | + | chr1_2:74267123-74267142 | None:intergenic | 50.0% | |
ATCCCCCACCTCAAATGGTT+TGG | - | chr1_2:74267182-74267201 | Msa0092050:intron | 50.0% | |
! | CTCCAAACCATTTGAGGTGG+GGG | + | chr1_2:74267187-74267206 | None:intergenic | 50.0% |
GTCATGGTCATCGACCTTCT+TGG | - | chr1_2:74267224-74267243 | Msa0092050:intron | 50.0% | |
CAAGCAACTGCAAGCTAGTC+AGG | - | chr1_2:74268556-74268575 | Msa0092050:intron | 50.0% | |
! | CAACGGCGTCATTTGATTCG+TGG | - | chr1_2:74268638-74268657 | Msa0092050:intron | 50.0% |
! | AGAGTACTCTCACTTCGTCC+TGG | - | chr1_2:74268837-74268856 | Msa0092050:intron | 50.0% |
TTTCGCAAGGCCGAAGTCAA+TGG | + | chr1_2:74269566-74269585 | None:intergenic | 50.0% | |
CTCATAGGCACATACCGTAC+AGG | - | chr1_2:74269605-74269624 | Msa0092050:intron | 50.0% | |
TAGGCACATACCGTACAGGT+TGG | - | chr1_2:74269609-74269628 | Msa0092050:intron | 50.0% | |
GCAAGTGTCAACACCCATCT+TGG | - | chr1_2:74269949-74269968 | Msa0092050:intron | 50.0% | |
TGGTGGCAGAACAAAGTCGA+AGG | - | chr1_2:74270091-74270110 | Msa0092050:intron | 50.0% | |
GGTGGCAGAACAAAGTCGAA+GGG | - | chr1_2:74270092-74270111 | Msa0092050:intron | 50.0% | |
GCACTTAGGGTGTGTTTGGA+TGG | - | chr1_2:74270526-74270545 | Msa0092050:intron | 50.0% | |
! | ATGGAGTGTTTAGGAGGGGA+GGG | - | chr1_2:74270545-74270564 | Msa0092050:intron | 50.0% |
TGGATTGAGGGTTTAGGAGG+GGG | + | chr1_2:74271423-74271442 | None:intergenic | 50.0% | |
TCCACTATTGCCGTTCGTTG+AGG | - | chr1_2:74271599-74271618 | Msa0092050:intron | 50.0% | |
ACCTCAACGAACGGCAATAG+TGG | + | chr1_2:74271603-74271622 | None:intergenic | 50.0% | |
TTGCCGTTCGTTGAGGTTTG+AGG | - | chr1_2:74271606-74271625 | Msa0092050:intron | 50.0% | |
TCGGTGGTTGTGAATTGACG+TGG | - | chr1_2:74271739-74271758 | Msa0092050:intron | 50.0% | |
CGGTGGTTGTGAATTGACGT+GGG | - | chr1_2:74271740-74271759 | Msa0092050:intron | 50.0% | |
TTGTAACGACAGCATGGCAC+TGG | - | chr1_2:74271912-74271931 | Msa0092050:intron | 50.0% | |
CAGCTGAAAGACAACAGACC+TGG | + | chr1_2:74271987-74272006 | None:intergenic | 50.0% | |
AGAATTTGCGCGGTTCCTCT+GGG | + | chr1_2:74272231-74272250 | None:intergenic | 50.0% | |
TAGAATTTGCGCGGTTCCTC+TGG | + | chr1_2:74272232-74272251 | None:intergenic | 50.0% | |
GATGAGGGCTAGAATTTGCG+CGG | + | chr1_2:74272241-74272260 | None:intergenic | 50.0% | |
TGGTGTGTTCACCGTGATGA+GGG | + | chr1_2:74272256-74272275 | None:intergenic | 50.0% | |
ACGGTGAACACACCAGACAT+AGG | - | chr1_2:74272261-74272280 | Msa0092050:intron | 50.0% | |
TGAACTCTATGTGCGCCAGA+TGG | + | chr1_2:74272830-74272849 | None:intergenic | 50.0% | |
AGCTCCTCAGAGGATCATCA+CGG | + | chr1_2:74272910-74272929 | None:intergenic | 50.0% | |
! | GCTTTGAGCTCCTCACTATC+AGG | - | chr1_2:74272927-74272946 | Msa0092050:five_prime_UTR | 50.0% |
!! | CGGAGGAAGTGGGTCTTGTT+TGG | + | chr1_2:74265905-74265924 | None:intergenic | 55.0% |
AGAGGAGGTGGCTGTTAAGC+TGG | - | chr1_2:74266598-74266617 | Msa0092050:intron | 55.0% | |
! | GCCTGGTCTTCACAGATTCC+TGG | + | chr1_2:74267106-74267125 | None:intergenic | 55.0% |
CTGGAATCCCCCACCTCAAA+TGG | - | chr1_2:74267177-74267196 | Msa0092050:intron | 55.0% | |
CTTCCAGACTGGGTCCAAGA+AGG | + | chr1_2:74267241-74267260 | None:intergenic | 55.0% | |
TCTTCCCTGGCAAGGACTGA+GGG | - | chr1_2:74270245-74270264 | Msa0092050:intron | 55.0% | |
! | GATGGAGTGTTTAGGAGGGG+AGG | - | chr1_2:74270544-74270563 | Msa0092050:intron | 55.0% |
! | TGGAGTGTTTAGGAGGGGAG+GGG | - | chr1_2:74270546-74270565 | Msa0092050:intron | 55.0% |
TGTTTAGGAGGGGAGGGGAA+GGG | - | chr1_2:74270551-74270570 | Msa0092050:intron | 55.0% | |
GGGGCACAGATAGCTTAACG+TGG | - | chr1_2:74271308-74271327 | Msa0092050:intron | 55.0% | |
TGAGGGTTTAGGAGGGGGAA+GGG | + | chr1_2:74271418-74271437 | None:intergenic | 55.0% | |
TTGAGGGTTTAGGAGGGGGA+AGG | + | chr1_2:74271419-74271438 | None:intergenic | 55.0% | |
!! | GACGTGGGCATTGATCATGC+AGG | - | chr1_2:74271755-74271774 | Msa0092050:CDS | 55.0% |
CTAGAGCTGCCACTACTCTG+TGG | + | chr1_2:74271824-74271843 | None:intergenic | 55.0% | |
! | CAGAGTAGTGGCAGCTCTAG+AGG | - | chr1_2:74271824-74271843 | Msa0092050:CDS | 55.0% |
!! | GTAGTGGCAGCTCTAGAGGA+CGG | - | chr1_2:74271828-74271847 | Msa0092050:intron | 55.0% |
!! | TAGTGGCAGCTCTAGAGGAC+GGG | - | chr1_2:74271829-74271848 | Msa0092050:intron | 55.0% |
CTGGTGTGTTCACCGTGATG+AGG | + | chr1_2:74272257-74272276 | None:intergenic | 55.0% | |
AGGTGACCATTCTGGCAGGA+TGG | - | chr1_2:74272787-74272806 | Msa0092050:intron | 55.0% | |
TTGTGGCCATCCTGCCAGAA+TGG | + | chr1_2:74272796-74272815 | None:intergenic | 55.0% | |
CTCTATGTGCGCCAGATGGA+CGG | + | chr1_2:74272826-74272845 | None:intergenic | 55.0% | |
GCTCGCAATGGGTCTATGAG+AGG | - | chr1_2:74272881-74272900 | Msa0092050:five_prime_UTR | 55.0% | |
TCCTCAGAGGATCATCACGG+TGG | + | chr1_2:74272907-74272926 | None:intergenic | 55.0% | |
AGGAGCTCAAAGCTCCTCAG+AGG | + | chr1_2:74272920-74272939 | None:intergenic | 55.0% | |
CGACCTTCTTGGACCCAGTC+TGG | - | chr1_2:74267235-74267254 | Msa0092050:intron | 60.0% | |
CATAGCGTGCCGTGCCTGTA+AGG | + | chr1_2:74269930-74269949 | None:intergenic | 60.0% | |
GTCTTCCCTGGCAAGGACTG+AGG | - | chr1_2:74270244-74270263 | Msa0092050:intron | 60.0% | |
GTGTTTAGGAGGGGAGGGGA+AGG | - | chr1_2:74270550-74270569 | Msa0092050:intron | 60.0% | |
GTTTAGGAGGGGGAAGGGAG+GGG | + | chr1_2:74271413-74271432 | None:intergenic | 60.0% | |
GGTTTAGGAGGGGGAAGGGA+GGG | + | chr1_2:74271414-74271433 | None:intergenic | 60.0% | |
!! | ACGACAGCATGGCACTGGCA+AGG | - | chr1_2:74271917-74271936 | Msa0092050:intron | 60.0% |
CCTGCCAGAATGGTCACCTG+AGG | + | chr1_2:74272786-74272805 | None:intergenic | 60.0% | |
CCTCAGGTGACCATTCTGGC+AGG | - | chr1_2:74272783-74272802 | Msa0092050:intron | 60.0% | |
TCTGGCAGGATGGCCACAAG+TGG | - | chr1_2:74272797-74272816 | Msa0092050:intron | 60.0% | |
CTGGCAGGATGGCCACAAGT+GGG | - | chr1_2:74272798-74272817 | Msa0092050:CDS | 60.0% | |
TGGCAGGATGGCCACAAGTG+GGG | - | chr1_2:74272799-74272818 | Msa0092050:CDS | 60.0% | |
GCCACCGTGATGATCCTCTG+AGG | - | chr1_2:74272903-74272922 | Msa0092050:five_prime_UTR | 60.0% | |
CCAGCCCTCAGTCCTTGCCA+GGG | + | chr1_2:74270252-74270271 | None:intergenic | 65.0% | |
TCCAGCCCTCAGTCCTTGCC+AGG | + | chr1_2:74270253-74270272 | None:intergenic | 65.0% | |
TTAGGAGGGGAGGGGAAGGG+AGG | - | chr1_2:74270554-74270573 | Msa0092050:intron | 65.0% | |
TAGGAGGGGAGGGGAAGGGA+GGG | - | chr1_2:74270555-74270574 | Msa0092050:intron | 65.0% | |
GGGTTTAGGAGGGGGAAGGG+AGG | + | chr1_2:74271415-74271434 | None:intergenic | 65.0% | |
GGCAGGATGGCCACAAGTGG+GGG | - | chr1_2:74272800-74272819 | Msa0092050:CDS | 65.0% | |
AGATGGACGGCCCCCACTTG+TGG | + | chr1_2:74272813-74272832 | None:intergenic | 65.0% | |
ACAAGTGGGGGCCGTCCATC+TGG | - | chr1_2:74272812-74272831 | Msa0092050:CDS | 65.0% | |
CCCTGGCAAGGACTGAGGGC+TGG | - | chr1_2:74270249-74270268 | Msa0092050:intron | 70.0% | |
AGGAGGGGAGGGGAAGGGAG+GGG | - | chr1_2:74270556-74270575 | Msa0092050:intron | 70.0% | |
AGGAGGGGGAAGGGAGGGGA+GGG | + | chr1_2:74271409-74271428 | None:intergenic | 70.0% | |
TAGGAGGGGGAAGGGAGGGG+AGG | + | chr1_2:74271410-74271429 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_2 | gene | 74265817 | 74273453 | 74265817 | ID=Msa0092050;Name=Msa0092050 |
chr1_2 | mRNA | 74265817 | 74273453 | 74265817 | ID=Msa0092050-mRNA-1;Parent=Msa0092050;Name=Msa0092050-mRNA-1;_AED=0.09;_eAED=0.09;_QI=580|1|1|1|1|1|13|498|448 |
chr1_2 | exon | 74265817 | 74266560 | 74265817 | ID=Msa0092050-mRNA-1:exon:26185;Parent=Msa0092050-mRNA-1 |
chr1_2 | exon | 74266972 | 74267093 | 74266972 | ID=Msa0092050-mRNA-1:exon:26184;Parent=Msa0092050-mRNA-1 |
chr1_2 | exon | 74267283 | 74267346 | 74267283 | ID=Msa0092050-mRNA-1:exon:26183;Parent=Msa0092050-mRNA-1 |
chr1_2 | exon | 74267420 | 74267493 | 74267420 | ID=Msa0092050-mRNA-1:exon:26182;Parent=Msa0092050-mRNA-1 |
chr1_2 | exon | 74267585 | 74267711 | 74267585 | ID=Msa0092050-mRNA-1:exon:26181;Parent=Msa0092050-mRNA-1 |
chr1_2 | exon | 74268941 | 74269025 | 74268941 | ID=Msa0092050-mRNA-1:exon:26180;Parent=Msa0092050-mRNA-1 |
chr1_2 | exon | 74269107 | 74269170 | 74269107 | ID=Msa0092050-mRNA-1:exon:26179;Parent=Msa0092050-mRNA-1 |
chr1_2 | exon | 74269294 | 74269355 | 74269294 | ID=Msa0092050-mRNA-1:exon:26178;Parent=Msa0092050-mRNA-1 |
chr1_2 | exon | 74269644 | 74269714 | 74269644 | ID=Msa0092050-mRNA-1:exon:26177;Parent=Msa0092050-mRNA-1 |
chr1_2 | exon | 74271750 | 74271845 | 74271750 | ID=Msa0092050-mRNA-1:exon:26176;Parent=Msa0092050-mRNA-1 |
chr1_2 | exon | 74271945 | 74272163 | 74271945 | ID=Msa0092050-mRNA-1:exon:26175;Parent=Msa0092050-mRNA-1 |
chr1_2 | exon | 74272651 | 74272691 | 74272651 | ID=Msa0092050-mRNA-1:exon:26174;Parent=Msa0092050-mRNA-1 |
chr1_2 | exon | 74272798 | 74273453 | 74272798 | ID=Msa0092050-mRNA-1:exon:26173;Parent=Msa0092050-mRNA-1 |
chr1_2 | five_prime_UTR | 74272874 | 74273453 | 74272874 | ID=Msa0092050-mRNA-1:five_prime_utr;Parent=Msa0092050-mRNA-1 |
chr1_2 | CDS | 74272798 | 74272873 | 74272798 | ID=Msa0092050-mRNA-1:cds;Parent=Msa0092050-mRNA-1 |
chr1_2 | CDS | 74272651 | 74272691 | 74272651 | ID=Msa0092050-mRNA-1:cds;Parent=Msa0092050-mRNA-1 |
chr1_2 | CDS | 74271945 | 74272163 | 74271945 | ID=Msa0092050-mRNA-1:cds;Parent=Msa0092050-mRNA-1 |
chr1_2 | CDS | 74271750 | 74271845 | 74271750 | ID=Msa0092050-mRNA-1:cds;Parent=Msa0092050-mRNA-1 |
chr1_2 | CDS | 74269644 | 74269714 | 74269644 | ID=Msa0092050-mRNA-1:cds;Parent=Msa0092050-mRNA-1 |
chr1_2 | CDS | 74269294 | 74269355 | 74269294 | ID=Msa0092050-mRNA-1:cds;Parent=Msa0092050-mRNA-1 |
chr1_2 | CDS | 74269107 | 74269170 | 74269107 | ID=Msa0092050-mRNA-1:cds;Parent=Msa0092050-mRNA-1 |
chr1_2 | CDS | 74268941 | 74269025 | 74268941 | ID=Msa0092050-mRNA-1:cds;Parent=Msa0092050-mRNA-1 |
chr1_2 | CDS | 74267585 | 74267711 | 74267585 | ID=Msa0092050-mRNA-1:cds;Parent=Msa0092050-mRNA-1 |
chr1_2 | CDS | 74267420 | 74267493 | 74267420 | ID=Msa0092050-mRNA-1:cds;Parent=Msa0092050-mRNA-1 |
chr1_2 | CDS | 74267283 | 74267346 | 74267283 | ID=Msa0092050-mRNA-1:cds;Parent=Msa0092050-mRNA-1 |
chr1_2 | CDS | 74266972 | 74267093 | 74266972 | ID=Msa0092050-mRNA-1:cds;Parent=Msa0092050-mRNA-1 |
chr1_2 | CDS | 74266315 | 74266560 | 74266315 | ID=Msa0092050-mRNA-1:cds;Parent=Msa0092050-mRNA-1 |
chr1_2 | three_prime_UTR | 74265817 | 74266314 | 74265817 | ID=Msa0092050-mRNA-1:three_prime_utr;Parent=Msa0092050-mRNA-1 |
Gene Sequence |
Protein sequence |