Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0099660 | XP_003588912.1 | 97.288 | 553 | 15 | 0 | 1 | 553 | 1 | 553 | 0.0 | 1101 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0099660 | sp|Q9CAJ0|P2C16_ARATH | 56.193 | 436 | 162 | 5 | 131 | 553 | 92 | 511 | 5.35e-162 | 474 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0099660 | G7I8Z3 | 97.288 | 553 | 15 | 0 | 1 | 553 | 1 | 553 | 0.0 | 1101 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0053830 | Msa0099660 | 0.989583 | 9.529321e-179 | -8.615850e-47 |
Msa0099660 | Msa0099670 | 0.992952 | 1.717585e-196 | -8.615850e-47 |
Msa0099660 | Msa0137200 | 0.811233 | 7.754393e-51 | -8.615850e-47 |
Msa0099660 | Msa0182380 | 0.809502 | 1.832925e-50 | -8.615850e-47 |
Msa0099660 | Msa1404500 | 0.813954 | 1.970564e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0099660 | MtrunA17_Chr1g0150781 | 97.288 | 553 | 15 | 0 | 1 | 553 | 1 | 553 | 0.0 | 1101 |
Msa0099660 | MtrunA17_Chr3g0135961 | 67.029 | 552 | 168 | 4 | 8 | 553 | 6 | 549 | 0.0 | 718 |
Msa0099660 | MtrunA17_Chr2g0299981 | 44.692 | 584 | 253 | 12 | 1 | 553 | 1 | 545 | 5.87e-154 | 451 |
Msa0099660 | MtrunA17_Chr4g0070871 | 46.071 | 560 | 248 | 12 | 1 | 553 | 1 | 513 | 3.54e-148 | 436 |
Msa0099660 | MtrunA17_Chr8g0389921 | 51.456 | 309 | 132 | 7 | 240 | 548 | 149 | 439 | 1.38e-88 | 280 |
Msa0099660 | MtrunA17_Chr3g0112291 | 43.452 | 336 | 138 | 8 | 232 | 551 | 85 | 384 | 3.48e-78 | 251 |
Msa0099660 | MtrunA17_Chr5g0396731 | 42.133 | 375 | 182 | 9 | 175 | 543 | 5 | 350 | 6.62e-76 | 244 |
Msa0099660 | MtrunA17_Chr1g0158781 | 48.734 | 316 | 120 | 8 | 232 | 544 | 104 | 380 | 4.11e-74 | 240 |
Msa0099660 | MtrunA17_Chr5g0435721 | 43.871 | 310 | 121 | 6 | 237 | 530 | 190 | 462 | 9.36e-69 | 229 |
Msa0099660 | MtrunA17_Chr1g0150451 | 36.424 | 302 | 134 | 7 | 240 | 541 | 78 | 321 | 2.04e-47 | 168 |
Msa0099660 | MtrunA17_Chr3g0136711 | 36.755 | 302 | 133 | 7 | 240 | 541 | 35 | 278 | 5.55e-47 | 166 |
Msa0099660 | MtrunA17_Chr3g0126511 | 35.806 | 310 | 139 | 8 | 241 | 549 | 96 | 346 | 1.38e-42 | 156 |
Msa0099660 | MtrunA17_Chr1g0212961 | 33.974 | 312 | 134 | 8 | 240 | 546 | 96 | 340 | 2.48e-42 | 155 |
Msa0099660 | MtrunA17_Chr3g0105351 | 33.984 | 256 | 134 | 5 | 290 | 544 | 94 | 315 | 1.24e-36 | 138 |
Msa0099660 | MtrunA17_Chr3g0105371 | 35.156 | 256 | 131 | 6 | 290 | 544 | 118 | 339 | 3.43e-36 | 138 |
Msa0099660 | MtrunA17_Chr5g0430481 | 33.333 | 273 | 146 | 6 | 273 | 544 | 138 | 375 | 3.18e-35 | 136 |
Msa0099660 | MtrunA17_Chr4g0050381 | 34.815 | 270 | 122 | 9 | 283 | 544 | 54 | 277 | 1.86e-32 | 125 |
Msa0099660 | MtrunA17_Chr1g0171571 | 31.013 | 316 | 161 | 9 | 236 | 545 | 382 | 646 | 1.11e-31 | 129 |
Msa0099660 | MtrunA17_Chr1g0194191 | 32.394 | 284 | 146 | 10 | 285 | 550 | 113 | 368 | 2.91e-31 | 125 |
Msa0099660 | MtrunA17_Chr5g0407161 | 31.179 | 263 | 137 | 7 | 285 | 541 | 119 | 343 | 4.27e-30 | 121 |
Msa0099660 | MtrunA17_Chr2g0293811 | 30.566 | 265 | 150 | 5 | 285 | 543 | 95 | 331 | 1.67e-29 | 119 |
Msa0099660 | MtrunA17_Chr4g0065141 | 29.885 | 261 | 138 | 6 | 290 | 541 | 124 | 348 | 7.20e-29 | 118 |
Msa0099660 | MtrunA17_Chr3g0144111 | 32.061 | 262 | 113 | 8 | 290 | 545 | 27 | 229 | 1.04e-28 | 115 |
Msa0099660 | MtrunA17_Chr3g0138281 | 29.321 | 324 | 172 | 11 | 232 | 546 | 73 | 348 | 1.83e-28 | 117 |
Msa0099660 | MtrunA17_Chr3g0115851 | 32.946 | 258 | 129 | 7 | 290 | 544 | 66 | 282 | 3.77e-28 | 114 |
Msa0099660 | MtrunA17_Chr5g0426141 | 34.749 | 259 | 123 | 8 | 290 | 544 | 66 | 282 | 1.99e-27 | 112 |
Msa0099660 | MtrunA17_Chr3g0136811 | 28.188 | 298 | 140 | 5 | 240 | 493 | 24 | 291 | 1.61e-26 | 111 |
Msa0099660 | MtrunA17_Chr2g0279151 | 32.593 | 270 | 128 | 8 | 283 | 544 | 58 | 281 | 4.35e-26 | 108 |
Msa0099660 | MtrunA17_Chr4g0001761 | 30.537 | 298 | 133 | 10 | 240 | 493 | 24 | 291 | 9.05e-26 | 108 |
Msa0099660 | MtrunA17_Chr2g0317021 | 31.429 | 315 | 137 | 10 | 241 | 544 | 87 | 333 | 2.13e-25 | 107 |
Msa0099660 | MtrunA17_Chr1g0150071 | 28.526 | 312 | 131 | 10 | 240 | 498 | 24 | 296 | 3.10e-25 | 107 |
Msa0099660 | MtrunA17_Chr8g0360351 | 34.510 | 255 | 123 | 8 | 290 | 541 | 66 | 279 | 3.89e-25 | 105 |
Msa0099660 | MtrunA17_Chr4g0051661 | 32.157 | 255 | 128 | 6 | 290 | 541 | 183 | 395 | 6.07e-25 | 107 |
Msa0099660 | MtrunA17_Chr1g0185141 | 33.913 | 230 | 97 | 7 | 368 | 551 | 226 | 446 | 1.64e-24 | 108 |
Msa0099660 | MtrunA17_Chr3g0127091 | 25.507 | 345 | 160 | 12 | 240 | 543 | 61 | 349 | 2.97e-22 | 99.0 |
Msa0099660 | MtrunA17_Chr4g0066371 | 25.915 | 328 | 162 | 12 | 263 | 544 | 49 | 341 | 2.28e-21 | 96.7 |
Msa0099660 | MtrunA17_Chr6g0483411 | 28.417 | 278 | 137 | 11 | 291 | 544 | 80 | 319 | 1.46e-20 | 92.8 |
Msa0099660 | MtrunA17_Chr7g0243571 | 31.489 | 235 | 122 | 8 | 290 | 488 | 92 | 323 | 1.02e-19 | 92.0 |
Msa0099660 | MtrunA17_Chr3g0133801 | 30.935 | 278 | 128 | 11 | 291 | 548 | 67 | 300 | 2.57e-19 | 90.5 |
Msa0099660 | MtrunA17_Chr4g0067711 | 33.766 | 231 | 121 | 9 | 290 | 491 | 91 | 318 | 4.19e-19 | 89.4 |
Msa0099660 | MtrunA17_Chr2g0286951 | 26.282 | 312 | 153 | 11 | 276 | 544 | 65 | 342 | 4.58e-19 | 89.7 |
Msa0099660 | MtrunA17_Chr1g0192421 | 33.032 | 221 | 126 | 8 | 290 | 488 | 89 | 309 | 9.71e-19 | 87.8 |
Msa0099660 | MtrunA17_Chr1g0209451 | 30.035 | 283 | 147 | 10 | 274 | 545 | 57 | 299 | 7.80e-18 | 86.3 |
Msa0099660 | MtrunA17_Chr1g0213351 | 29.153 | 295 | 148 | 11 | 290 | 543 | 80 | 354 | 1.14e-17 | 85.1 |
Msa0099660 | MtrunA17_Chr4g0004971 | 28.881 | 277 | 144 | 9 | 288 | 535 | 76 | 328 | 1.23e-17 | 84.7 |
Msa0099660 | MtrunA17_Chr1g0151781 | 29.515 | 227 | 125 | 8 | 290 | 488 | 68 | 287 | 3.37e-17 | 83.2 |
Msa0099660 | MtrunA17_Chr7g0221691 | 30.165 | 242 | 128 | 8 | 288 | 488 | 127 | 368 | 4.26e-17 | 84.0 |
Msa0099660 | MtrunA17_Chr1g0153671 | 29.197 | 274 | 138 | 10 | 291 | 548 | 66 | 299 | 5.68e-17 | 83.6 |
Msa0099660 | MtrunA17_Chr6g0486661 | 23.188 | 345 | 186 | 13 | 186 | 491 | 41 | 345 | 1.49e-16 | 83.6 |
Msa0099660 | MtrunA17_Chr2g0295401 | 30.137 | 219 | 121 | 8 | 292 | 483 | 94 | 307 | 3.43e-16 | 80.5 |
Msa0099660 | MtrunA17_Chr1g0207571 | 30.303 | 297 | 144 | 15 | 290 | 543 | 61 | 337 | 4.25e-16 | 80.5 |
Msa0099660 | MtrunA17_Chr2g0324061 | 28.814 | 236 | 128 | 7 | 290 | 488 | 90 | 322 | 1.25e-15 | 79.7 |
Msa0099660 | MtrunA17_Chr7g0272061 | 30.043 | 233 | 126 | 8 | 290 | 488 | 91 | 320 | 1.40e-15 | 78.6 |
Msa0099660 | MtrunA17_Chr7g0225501 | 30.882 | 204 | 120 | 8 | 291 | 483 | 87 | 280 | 1.56e-15 | 79.0 |
Msa0099660 | MtrunA17_Chr7g0271971 | 29.520 | 271 | 135 | 10 | 291 | 545 | 69 | 299 | 1.87e-15 | 78.6 |
Msa0099660 | MtrunA17_Chr7g0249421 | 29.119 | 261 | 129 | 9 | 280 | 488 | 87 | 343 | 2.37e-15 | 79.0 |
Msa0099660 | MtrunA17_Chr4g0022171 | 27.869 | 244 | 135 | 6 | 283 | 488 | 89 | 329 | 2.89e-15 | 78.6 |
Msa0099660 | MtrunA17_Chr1g0192471 | 30.712 | 267 | 137 | 10 | 291 | 545 | 69 | 299 | 4.57e-15 | 77.4 |
Msa0099660 | MtrunA17_Chr3g0089721 | 27.458 | 295 | 157 | 11 | 290 | 543 | 68 | 346 | 8.29e-15 | 76.3 |
Msa0099660 | MtrunA17_Chr7g0238501 | 25.685 | 292 | 173 | 10 | 290 | 544 | 263 | 547 | 1.69e-14 | 76.3 |
Msa0099660 | MtrunA17_Chr3g0089711 | 27.148 | 291 | 163 | 10 | 290 | 543 | 68 | 346 | 2.61e-14 | 74.7 |
Msa0099660 | MtrunA17_Chr7g0263281 | 29.958 | 237 | 111 | 11 | 285 | 483 | 67 | 286 | 3.53e-14 | 74.3 |
Msa0099660 | MtrunA17_Chr8g0371321 | 26.337 | 243 | 117 | 6 | 290 | 490 | 79 | 301 | 9.99e-14 | 73.2 |
Msa0099660 | MtrunA17_Chr1g0181901 | 28.452 | 239 | 122 | 10 | 285 | 488 | 72 | 296 | 1.16e-13 | 73.2 |
Msa0099660 | MtrunA17_Chr4g0063111 | 30.435 | 230 | 115 | 9 | 290 | 488 | 74 | 289 | 3.15e-13 | 72.4 |
Msa0099660 | MtrunA17_Chr1g0211251 | 26.471 | 238 | 123 | 8 | 290 | 490 | 81 | 303 | 5.20e-13 | 70.9 |
Msa0099660 | MtrunA17_Chr7g0256751 | 26.778 | 239 | 121 | 10 | 290 | 490 | 69 | 291 | 1.69e-12 | 69.7 |
Msa0099660 | MtrunA17_Chr2g0294291 | 25.086 | 291 | 166 | 10 | 290 | 543 | 75 | 350 | 3.55e-12 | 68.2 |
Msa0099660 | MtrunA17_Chr1g0175381 | 26.246 | 301 | 164 | 13 | 290 | 551 | 79 | 360 | 9.18e-12 | 67.0 |
Msa0099660 | MtrunA17_Chr4g0068971 | 31.757 | 148 | 75 | 5 | 408 | 549 | 110 | 237 | 1.26e-11 | 65.5 |
Msa0099660 | MtrunA17_Chr3g0089691 | 30.093 | 216 | 107 | 8 | 367 | 543 | 50 | 260 | 5.28e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0099660 | AT1G72770.4 | 56.193 | 436 | 162 | 5 | 131 | 553 | 92 | 511 | 5.44e-163 | 474 |
Msa0099660 | AT1G72770.1 | 56.193 | 436 | 162 | 5 | 131 | 553 | 92 | 511 | 5.44e-163 | 474 |
Msa0099660 | AT1G72770.3 | 56.193 | 436 | 162 | 5 | 131 | 553 | 92 | 511 | 5.44e-163 | 474 |
Msa0099660 | AT1G17550.1 | 47.173 | 566 | 231 | 11 | 1 | 553 | 1 | 511 | 5.71e-159 | 463 |
Msa0099660 | AT1G17550.2 | 47.173 | 566 | 231 | 11 | 1 | 553 | 1 | 511 | 5.71e-159 | 463 |
Msa0099660 | AT5G57050.1 | 66.964 | 336 | 94 | 6 | 224 | 553 | 97 | 421 | 3.38e-156 | 453 |
Msa0099660 | AT5G57050.2 | 66.964 | 336 | 94 | 6 | 224 | 553 | 57 | 381 | 3.63e-156 | 451 |
Msa0099660 | AT4G26080.1 | 65.476 | 336 | 92 | 6 | 224 | 552 | 113 | 431 | 7.22e-149 | 435 |
Msa0099660 | AT1G72770.2 | 51.534 | 326 | 129 | 5 | 131 | 443 | 92 | 401 | 9.56e-98 | 303 |
Msa0099660 | AT1G72770.5 | 51.534 | 326 | 129 | 5 | 131 | 443 | 92 | 401 | 9.56e-98 | 303 |
Msa0099660 | AT5G57050.3 | 62.667 | 225 | 71 | 5 | 224 | 447 | 97 | 309 | 1.21e-91 | 284 |
Msa0099660 | AT1G07430.1 | 41.667 | 360 | 139 | 7 | 229 | 548 | 110 | 438 | 2.97e-78 | 253 |
Msa0099660 | AT2G29380.1 | 46.082 | 319 | 129 | 9 | 237 | 544 | 75 | 361 | 7.14e-78 | 250 |
Msa0099660 | AT3G11410.1 | 44.231 | 312 | 120 | 7 | 197 | 490 | 68 | 343 | 6.94e-72 | 235 |
Msa0099660 | AT5G51760.2 | 41.641 | 329 | 157 | 5 | 233 | 544 | 72 | 382 | 7.12e-68 | 224 |
Msa0099660 | AT5G51760.1 | 41.641 | 329 | 157 | 5 | 233 | 544 | 102 | 412 | 1.54e-67 | 224 |
Msa0099660 | AT5G59220.1 | 43.161 | 329 | 140 | 8 | 189 | 501 | 55 | 352 | 1.08e-66 | 222 |
Msa0099660 | AT5G59220.2 | 40.959 | 271 | 115 | 7 | 189 | 443 | 55 | 296 | 7.71e-47 | 166 |
Msa0099660 | AT5G24940.1 | 35.974 | 303 | 134 | 9 | 240 | 541 | 34 | 277 | 3.67e-45 | 166 |
Msa0099660 | AT5G10740.1 | 35.430 | 302 | 137 | 7 | 240 | 541 | 34 | 277 | 7.16e-45 | 162 |
Msa0099660 | AT5G10740.2 | 35.430 | 302 | 137 | 7 | 240 | 541 | 34 | 277 | 7.16e-45 | 162 |
Msa0099660 | AT4G31750.2 | 35.099 | 302 | 138 | 7 | 240 | 541 | 34 | 277 | 7.23e-45 | 161 |
Msa0099660 | AT4G31750.1 | 35.099 | 302 | 138 | 7 | 240 | 541 | 34 | 277 | 7.77e-45 | 161 |
Msa0099660 | AT4G31750.3 | 35.099 | 302 | 138 | 7 | 240 | 541 | 34 | 277 | 7.77e-45 | 161 |
Msa0099660 | AT5G53140.1 | 36.066 | 305 | 135 | 9 | 241 | 544 | 103 | 348 | 8.12e-45 | 164 |
Msa0099660 | AT5G53140.2 | 36.066 | 305 | 135 | 9 | 241 | 544 | 103 | 348 | 8.12e-45 | 164 |
Msa0099660 | AT1G43900.1 | 34.628 | 309 | 135 | 9 | 240 | 544 | 124 | 369 | 3.18e-41 | 153 |
Msa0099660 | AT1G67820.2 | 32.222 | 360 | 148 | 11 | 240 | 543 | 85 | 404 | 1.71e-39 | 149 |
Msa0099660 | AT1G67820.1 | 32.222 | 360 | 148 | 11 | 240 | 543 | 121 | 440 | 4.53e-39 | 149 |
Msa0099660 | AT2G40180.1 | 37.109 | 256 | 130 | 7 | 290 | 544 | 161 | 386 | 2.10e-37 | 142 |
Msa0099660 | AT1G07160.1 | 33.550 | 307 | 148 | 7 | 241 | 543 | 122 | 376 | 6.14e-35 | 135 |
Msa0099660 | AT2G30020.1 | 34.416 | 308 | 145 | 10 | 241 | 544 | 139 | 393 | 9.34e-35 | 135 |
Msa0099660 | AT2G33700.1 | 33.588 | 262 | 130 | 8 | 290 | 545 | 123 | 346 | 2.87e-32 | 128 |
Msa0099660 | AT3G17250.1 | 31.136 | 273 | 146 | 8 | 290 | 548 | 158 | 402 | 8.34e-32 | 127 |
Msa0099660 | AT2G25620.1 | 30.449 | 312 | 156 | 10 | 247 | 546 | 97 | 359 | 7.00e-31 | 124 |
Msa0099660 | AT2G25620.2 | 30.449 | 312 | 156 | 10 | 247 | 546 | 97 | 359 | 7.00e-31 | 124 |
Msa0099660 | AT3G51470.2 | 31.939 | 263 | 135 | 8 | 290 | 546 | 62 | 286 | 7.14e-31 | 122 |
Msa0099660 | AT2G40860.4 | 30.255 | 314 | 153 | 10 | 241 | 545 | 296 | 552 | 8.62e-31 | 126 |
Msa0099660 | AT3G51470.1 | 31.939 | 263 | 135 | 8 | 290 | 546 | 106 | 330 | 1.14e-30 | 123 |
Msa0099660 | AT1G48040.1 | 32.727 | 275 | 141 | 9 | 290 | 548 | 116 | 362 | 1.16e-30 | 124 |
Msa0099660 | AT2G40860.1 | 29.936 | 314 | 154 | 9 | 241 | 545 | 394 | 650 | 1.77e-30 | 126 |
Msa0099660 | AT3G62260.3 | 31.179 | 263 | 148 | 7 | 285 | 541 | 22 | 257 | 2.69e-29 | 117 |
Msa0099660 | AT1G22280.3 | 32.950 | 261 | 131 | 8 | 290 | 544 | 65 | 287 | 8.62e-29 | 116 |
Msa0099660 | AT3G62260.2 | 31.179 | 263 | 148 | 7 | 285 | 541 | 112 | 347 | 8.77e-29 | 118 |
Msa0099660 | AT3G62260.1 | 31.179 | 263 | 148 | 7 | 285 | 541 | 111 | 346 | 8.89e-29 | 118 |
Msa0099660 | AT2G34740.1 | 34.866 | 261 | 118 | 10 | 290 | 543 | 119 | 334 | 1.38e-28 | 117 |
Msa0099660 | AT1G78200.5 | 33.721 | 258 | 130 | 7 | 290 | 544 | 19 | 238 | 1.74e-27 | 111 |
Msa0099660 | AT1G78200.4 | 33.721 | 258 | 130 | 7 | 290 | 544 | 19 | 238 | 1.74e-27 | 111 |
Msa0099660 | AT1G34750.2 | 33.333 | 258 | 128 | 8 | 290 | 544 | 66 | 282 | 3.94e-27 | 111 |
Msa0099660 | AT1G34750.1 | 33.333 | 258 | 128 | 8 | 290 | 544 | 66 | 282 | 3.94e-27 | 111 |
Msa0099660 | AT1G34750.3 | 33.333 | 258 | 128 | 8 | 290 | 544 | 66 | 282 | 3.94e-27 | 111 |
Msa0099660 | AT1G22280.1 | 32.946 | 258 | 129 | 8 | 290 | 544 | 65 | 281 | 7.92e-27 | 110 |
Msa0099660 | AT1G78200.1 | 33.721 | 258 | 130 | 7 | 290 | 544 | 64 | 283 | 9.27e-27 | 110 |
Msa0099660 | AT1G78200.3 | 33.721 | 258 | 130 | 7 | 290 | 544 | 64 | 283 | 9.27e-27 | 110 |
Msa0099660 | AT1G78200.2 | 33.721 | 258 | 130 | 7 | 290 | 544 | 64 | 283 | 9.27e-27 | 110 |
Msa0099660 | AT2G40860.2 | 29.771 | 262 | 138 | 7 | 241 | 493 | 394 | 618 | 2.07e-26 | 114 |
Msa0099660 | AT2G25070.1 | 31.633 | 294 | 135 | 13 | 240 | 493 | 24 | 291 | 7.17e-26 | 109 |
Msa0099660 | AT2G25070.2 | 31.633 | 294 | 135 | 13 | 240 | 493 | 24 | 291 | 7.17e-26 | 109 |
Msa0099660 | AT2G20630.1 | 32.950 | 261 | 125 | 9 | 290 | 544 | 63 | 279 | 1.52e-25 | 106 |
Msa0099660 | AT2G20630.2 | 33.074 | 257 | 122 | 9 | 290 | 540 | 63 | 275 | 1.05e-24 | 104 |
Msa0099660 | AT4G31860.3 | 29.932 | 294 | 140 | 11 | 240 | 493 | 24 | 291 | 4.03e-24 | 103 |
Msa0099660 | AT4G31860.1 | 29.932 | 294 | 140 | 11 | 240 | 493 | 24 | 291 | 6.94e-24 | 103 |
Msa0099660 | AT3G15260.2 | 31.783 | 258 | 132 | 7 | 290 | 544 | 73 | 289 | 7.46e-24 | 102 |
Msa0099660 | AT3G15260.1 | 31.783 | 258 | 132 | 7 | 290 | 544 | 73 | 289 | 7.46e-24 | 102 |
Msa0099660 | AT3G63340.12 | 35.242 | 227 | 84 | 8 | 368 | 544 | 233 | 446 | 1.36e-23 | 105 |
Msa0099660 | AT4G28400.1 | 29.430 | 316 | 157 | 13 | 245 | 543 | 16 | 282 | 2.65e-23 | 100 |
Msa0099660 | AT4G28400.3 | 32.075 | 265 | 120 | 11 | 290 | 543 | 45 | 260 | 2.74e-23 | 99.8 |
Msa0099660 | AT3G63340.11 | 35.242 | 227 | 84 | 8 | 368 | 544 | 233 | 446 | 3.95e-23 | 104 |
Msa0099660 | AT3G63340.6 | 35.242 | 227 | 84 | 8 | 368 | 544 | 233 | 446 | 4.15e-23 | 104 |
Msa0099660 | AT3G63340.3 | 35.242 | 227 | 84 | 8 | 368 | 544 | 233 | 446 | 4.15e-23 | 104 |
Msa0099660 | AT3G63340.10 | 35.242 | 227 | 84 | 8 | 368 | 544 | 233 | 446 | 4.15e-23 | 104 |
Msa0099660 | AT3G63340.4 | 35.242 | 227 | 84 | 8 | 368 | 544 | 233 | 446 | 4.15e-23 | 104 |
Msa0099660 | AT3G63340.7 | 35.242 | 227 | 84 | 8 | 368 | 544 | 233 | 446 | 5.07e-23 | 104 |
Msa0099660 | AT3G63340.8 | 35.242 | 227 | 84 | 8 | 368 | 544 | 233 | 446 | 5.16e-23 | 104 |
Msa0099660 | AT3G63340.5 | 35.242 | 227 | 84 | 8 | 368 | 544 | 233 | 446 | 5.53e-23 | 104 |
Msa0099660 | AT3G63340.1 | 35.242 | 227 | 84 | 8 | 368 | 544 | 233 | 446 | 5.53e-23 | 104 |
Msa0099660 | AT3G63320.1 | 28.221 | 326 | 146 | 12 | 292 | 544 | 71 | 381 | 1.53e-22 | 100 |
Msa0099660 | AT3G63320.2 | 33.921 | 227 | 87 | 8 | 368 | 544 | 85 | 298 | 3.28e-22 | 99.0 |
Msa0099660 | AT3G06270.1 | 26.460 | 291 | 145 | 7 | 289 | 544 | 87 | 343 | 8.44e-22 | 97.4 |
Msa0099660 | AT1G34750.4 | 33.663 | 202 | 109 | 6 | 290 | 488 | 66 | 245 | 1.40e-21 | 94.7 |
Msa0099660 | AT3G16800.2 | 32.127 | 221 | 126 | 7 | 290 | 490 | 93 | 309 | 1.07e-20 | 94.4 |
Msa0099660 | AT3G16800.1 | 32.127 | 221 | 126 | 7 | 290 | 490 | 93 | 309 | 1.07e-20 | 94.4 |
Msa0099660 | AT3G16800.3 | 32.127 | 221 | 126 | 7 | 290 | 490 | 93 | 309 | 1.07e-20 | 94.4 |
Msa0099660 | AT4G27800.1 | 27.557 | 352 | 166 | 14 | 237 | 551 | 56 | 355 | 1.40e-20 | 94.4 |
Msa0099660 | AT2G34740.3 | 36.318 | 201 | 97 | 9 | 290 | 483 | 115 | 291 | 2.00e-20 | 92.4 |
Msa0099660 | AT2G34740.2 | 36.318 | 201 | 97 | 9 | 290 | 483 | 133 | 309 | 2.00e-20 | 92.8 |
Msa0099660 | AT4G31860.2 | 30.216 | 278 | 128 | 11 | 240 | 477 | 24 | 275 | 3.01e-20 | 91.3 |
Msa0099660 | AT3G16800.4 | 28.676 | 272 | 158 | 9 | 293 | 545 | 1 | 255 | 4.34e-20 | 90.5 |
Msa0099660 | AT3G16800.6 | 28.676 | 272 | 158 | 9 | 293 | 545 | 1 | 255 | 4.34e-20 | 90.5 |
Msa0099660 | AT1G09160.2 | 30.877 | 285 | 144 | 11 | 273 | 545 | 56 | 299 | 1.22e-19 | 92.0 |
Msa0099660 | AT1G09160.1 | 30.877 | 285 | 144 | 11 | 273 | 545 | 56 | 299 | 1.22e-19 | 92.0 |
Msa0099660 | AT4G08260.1 | 31.373 | 255 | 109 | 10 | 291 | 544 | 20 | 209 | 1.34e-19 | 87.8 |
Msa0099660 | AT5G26010.1 | 32.889 | 225 | 114 | 9 | 288 | 488 | 71 | 282 | 1.90e-19 | 90.1 |
Msa0099660 | AT3G63340.2 | 41.333 | 150 | 68 | 6 | 402 | 544 | 343 | 479 | 6.86e-19 | 91.3 |
Msa0099660 | AT5G02760.1 | 30.603 | 232 | 115 | 7 | 290 | 488 | 72 | 290 | 1.33e-18 | 88.2 |
Msa0099660 | AT1G68410.4 | 28.720 | 289 | 153 | 10 | 274 | 550 | 62 | 309 | 2.52e-18 | 88.2 |
Msa0099660 | AT1G68410.3 | 28.720 | 289 | 153 | 10 | 274 | 550 | 62 | 309 | 2.52e-18 | 88.2 |
Msa0099660 | AT1G68410.1 | 28.720 | 289 | 153 | 10 | 274 | 550 | 62 | 309 | 2.52e-18 | 88.2 |
Msa0099660 | AT1G68410.2 | 28.720 | 289 | 153 | 10 | 274 | 550 | 62 | 309 | 2.52e-18 | 88.2 |
Msa0099660 | AT4G28400.2 | 29.150 | 247 | 140 | 9 | 245 | 479 | 16 | 239 | 5.73e-18 | 84.3 |
Msa0099660 | AT4G03415.1 | 29.388 | 245 | 131 | 6 | 283 | 488 | 90 | 331 | 1.47e-17 | 85.9 |
Msa0099660 | AT4G03415.3 | 29.388 | 245 | 131 | 6 | 283 | 488 | 90 | 331 | 1.47e-17 | 85.9 |
Msa0099660 | AT4G03415.2 | 29.388 | 245 | 131 | 6 | 283 | 488 | 90 | 331 | 1.47e-17 | 85.9 |
Msa0099660 | AT1G17545.1 | 37.333 | 150 | 41 | 5 | 262 | 407 | 78 | 178 | 1.51e-17 | 81.3 |
Msa0099660 | AT2G40860.3 | 27.197 | 239 | 128 | 7 | 241 | 470 | 394 | 595 | 1.70e-17 | 86.3 |
Msa0099660 | AT5G01700.1 | 31.674 | 221 | 125 | 8 | 288 | 485 | 27 | 244 | 7.23e-17 | 82.4 |
Msa0099660 | AT1G47380.1 | 28.881 | 277 | 135 | 11 | 291 | 548 | 65 | 298 | 1.57e-16 | 82.4 |
Msa0099660 | AT5G01700.2 | 31.674 | 221 | 125 | 8 | 288 | 485 | 76 | 293 | 1.97e-16 | 81.6 |
Msa0099660 | AT4G38520.2 | 26.804 | 291 | 156 | 11 | 290 | 541 | 81 | 353 | 2.33e-16 | 81.6 |
Msa0099660 | AT4G38520.1 | 26.804 | 291 | 156 | 11 | 290 | 541 | 81 | 353 | 2.33e-16 | 81.6 |
Msa0099660 | AT4G32950.1 | 29.137 | 278 | 144 | 10 | 292 | 547 | 74 | 320 | 2.69e-16 | 80.5 |
Msa0099660 | AT5G27930.1 | 31.556 | 225 | 125 | 8 | 290 | 488 | 92 | 313 | 4.07e-16 | 80.9 |
Msa0099660 | AT5G27930.2 | 31.556 | 225 | 125 | 8 | 290 | 488 | 92 | 313 | 4.07e-16 | 80.9 |
Msa0099660 | AT4G27800.2 | 27.211 | 294 | 143 | 11 | 237 | 493 | 56 | 315 | 5.51e-16 | 79.7 |
Msa0099660 | AT1G16220.1 | 29.084 | 251 | 135 | 11 | 280 | 488 | 86 | 335 | 6.06e-16 | 81.3 |
Msa0099660 | AT4G27800.3 | 27.211 | 294 | 143 | 11 | 237 | 493 | 56 | 315 | 6.72e-16 | 79.3 |
Msa0099660 | AT3G12620.2 | 27.000 | 300 | 157 | 11 | 285 | 543 | 79 | 357 | 7.43e-16 | 80.1 |
Msa0099660 | AT3G12620.1 | 27.000 | 300 | 157 | 11 | 285 | 543 | 79 | 357 | 7.43e-16 | 80.1 |
Msa0099660 | AT1G03590.1 | 29.339 | 242 | 132 | 7 | 283 | 488 | 83 | 321 | 1.55e-15 | 79.7 |
Msa0099660 | AT3G55050.1 | 26.510 | 298 | 161 | 10 | 285 | 543 | 80 | 358 | 2.51e-15 | 78.6 |
Msa0099660 | AT3G55050.2 | 26.510 | 298 | 161 | 10 | 285 | 543 | 80 | 358 | 2.51e-15 | 78.6 |
Msa0099660 | AT5G36250.1 | 35.714 | 140 | 74 | 4 | 368 | 491 | 207 | 346 | 7.37e-15 | 77.4 |
Msa0099660 | AT1G79630.2 | 28.044 | 271 | 132 | 11 | 280 | 488 | 19 | 288 | 8.57e-15 | 77.0 |
Msa0099660 | AT1G79630.7 | 28.044 | 271 | 132 | 11 | 280 | 488 | 19 | 288 | 8.57e-15 | 77.0 |
Msa0099660 | AT3G05640.2 | 31.532 | 222 | 123 | 8 | 290 | 488 | 93 | 308 | 1.00e-14 | 76.3 |
Msa0099660 | AT3G05640.1 | 31.532 | 222 | 123 | 8 | 290 | 488 | 93 | 308 | 1.00e-14 | 76.3 |
Msa0099660 | AT3G05640.3 | 31.532 | 222 | 123 | 8 | 290 | 488 | 93 | 308 | 1.00e-14 | 76.3 |
Msa0099660 | AT4G33920.1 | 26.144 | 306 | 166 | 11 | 280 | 543 | 51 | 338 | 1.32e-14 | 76.3 |
Msa0099660 | AT1G79630.1 | 28.044 | 271 | 132 | 11 | 280 | 488 | 89 | 358 | 1.49e-14 | 76.6 |
Msa0099660 | AT1G79630.8 | 28.044 | 271 | 132 | 11 | 280 | 488 | 85 | 354 | 1.63e-14 | 76.6 |
Msa0099660 | AT3G27140.1 | 27.757 | 263 | 104 | 6 | 290 | 551 | 19 | 196 | 3.57e-14 | 72.8 |
Msa0099660 | AT1G79630.6 | 35.036 | 137 | 73 | 3 | 368 | 488 | 112 | 248 | 9.40e-14 | 73.6 |
Msa0099660 | AT1G79630.3 | 35.036 | 137 | 73 | 3 | 368 | 488 | 112 | 248 | 9.40e-14 | 73.6 |
Msa0099660 | AT1G79630.4 | 35.036 | 137 | 73 | 3 | 368 | 488 | 112 | 248 | 9.40e-14 | 73.6 |
Msa0099660 | AT1G79630.5 | 35.036 | 137 | 73 | 3 | 368 | 488 | 112 | 248 | 9.40e-14 | 73.6 |
Msa0099660 | AT3G02750.2 | 37.313 | 134 | 68 | 4 | 368 | 485 | 216 | 349 | 1.30e-13 | 73.9 |
Msa0099660 | AT3G02750.1 | 37.313 | 134 | 68 | 4 | 368 | 485 | 216 | 349 | 1.30e-13 | 73.9 |
Msa0099660 | AT5G06750.3 | 27.500 | 240 | 123 | 8 | 290 | 491 | 82 | 308 | 7.48e-13 | 70.9 |
Msa0099660 | AT5G06750.1 | 27.500 | 240 | 123 | 8 | 290 | 491 | 82 | 308 | 7.48e-13 | 70.9 |
Msa0099660 | AT4G33920.2 | 26.939 | 245 | 132 | 8 | 341 | 543 | 16 | 255 | 6.15e-11 | 63.9 |
Msa0099660 | AT2G05050.1 | 33.333 | 138 | 67 | 4 | 416 | 544 | 69 | 190 | 7.20e-11 | 62.0 |
Msa0099660 | AT4G33920.3 | 28.111 | 217 | 112 | 6 | 366 | 543 | 14 | 225 | 8.34e-11 | 63.2 |
Find 180 sgRNAs with CRISPR-Local
Find 376 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGTTGTCTTTGCTTCCTTTC+TGG | 0.045002 | 1_3:-5861908 | None:intergenic |
GCAACTGCGTCTTCCATTTC+TGG | 0.094152 | 1_3:-5858850 | None:intergenic |
GAATCATCATCCTCACTTTC+TGG | 0.164991 | 1_3:-5858427 | None:intergenic |
TTTCACCAATTGTTTCTTAA+AGG | 0.174144 | 1_3:+5859207 | Msa0099660:CDS |
AATTGGATTATACCCCATTA+TGG | 0.180255 | 1_3:+5858800 | Msa0099660:CDS |
GCAGTGGAGCCAACAGTTTC+TGG | 0.231039 | 1_3:-5859274 | None:intergenic |
TAAATTTAGTTGCTTATTCT+AGG | 0.234326 | 1_3:+5862164 | Msa0099660:three_prime_UTR |
TCATAATAAGGGTGGCAATT+TGG | 0.241063 | 1_3:+5858282 | Msa0099660:CDS |
CTCGAAAACGTATACTTCTT+TGG | 0.264509 | 1_3:+5861790 | Msa0099660:CDS |
GTTGCTCACACCGCTGATTT+GGG | 0.265336 | 1_3:+5858616 | Msa0099660:CDS |
TTCGGACGATTGTCATAATA+AGG | 0.265496 | 1_3:+5858270 | Msa0099660:CDS |
TGTTGCTCACACCGCTGATT+TGG | 0.282659 | 1_3:+5858615 | Msa0099660:CDS |
CCGCAAATGACCCATTTCTT+TGG | 0.291037 | 1_3:+5858955 | Msa0099660:CDS |
AGAGGATGAATGTCTCATTT+TGG | 0.293893 | 1_3:+5861716 | Msa0099660:CDS |
ATTCCCATTCAGATGCTAAT+TGG | 0.295899 | 1_3:+5858895 | Msa0099660:CDS |
TTTCCTCGGTCAATGCAATA+TGG | 0.311399 | 1_3:-5859114 | None:intergenic |
CACCGTTGACAAACAAAATT+AGG | 0.314546 | 1_3:+5857324 | Msa0099660:five_prime_UTR |
CGAGGAATGAATTGAACTTC+TGG | 0.323228 | 1_3:-5861687 | None:intergenic |
TGGAATGGCCATCGTGTATT+TGG | 0.332051 | 1_3:+5859548 | Msa0099660:CDS |
TTCTTGCATATTCATCTTCT+CGG | 0.337117 | 1_3:-5859496 | None:intergenic |
TATTTATTGAAATTGAAGTT+TGG | 0.337417 | 1_3:+5857825 | Msa0099660:five_prime_UTR |
GGTAAGTGGGTGTTTAGAAT+TGG | 0.340891 | 1_3:-5857026 | None:intergenic |
TTTGAAACCGTCAATTATTC+CGG | 0.343631 | 1_3:+5861662 | Msa0099660:CDS |
CTTGCAATGTCAAGATCTAT+TGG | 0.345690 | 1_3:+5859575 | Msa0099660:CDS |
GTGATATGAATCCCCATAAT+GGG | 0.351275 | 1_3:-5858813 | None:intergenic |
TCTGCTGCTGCTTGTGCTGC+AGG | 0.357440 | 1_3:-5861864 | None:intergenic |
AGTGATATGAATCCCCATAA+TGG | 0.362495 | 1_3:-5858814 | None:intergenic |
TTGCTTATTCTAGGAATGAT+AGG | 0.368594 | 1_3:+5862173 | Msa0099660:three_prime_UTR |
GAGCAACTGTAGAAGGCTTT+AGG | 0.372631 | 1_3:-5858723 | None:intergenic |
CATCATAGACTCCAAAGAAA+TGG | 0.377707 | 1_3:-5858966 | None:intergenic |
ATTGGATTATACCCCATTAT+GGG | 0.378212 | 1_3:+5858801 | Msa0099660:CDS |
AATCATCATCCTCACTTTCT+GGG | 0.380381 | 1_3:-5858426 | None:intergenic |
TCTGATTCAACTCCAATCTC+TGG | 0.385927 | 1_3:-5858700 | None:intergenic |
AGCTGATGAGCAACTGTAGA+AGG | 0.391208 | 1_3:-5858730 | None:intergenic |
AACAAAACATGATGATTTCA+AGG | 0.402769 | 1_3:+5861975 | Msa0099660:exon |
GGATGATGATTCATTATCAT+TGG | 0.403575 | 1_3:+5858438 | Msa0099660:CDS |
TCATTTGCGGCCTAAAACAC+CGG | 0.408501 | 1_3:-5858942 | None:intergenic |
TTGTCCTATAGGGTCTCCTT+AGG | 0.412982 | 1_3:+5857941 | Msa0099660:five_prime_UTR |
TCAACTATAGAGACAACAAT+TGG | 0.413133 | 1_3:-5857730 | None:intergenic |
GCATATTCATCTTCTCGGTT+CGG | 0.417201 | 1_3:-5859491 | None:intergenic |
GGAAGGAGAAAGTCCTTTGA+TGG | 0.419922 | 1_3:+5858351 | Msa0099660:CDS |
CATTCCTAAGGAGACCCTAT+AGG | 0.420020 | 1_3:-5857945 | None:intergenic |
GGCAATTTGGATGTTGAAAT+CGG | 0.424234 | 1_3:+5858295 | Msa0099660:CDS |
TCTGATAATACTTCAGAAGT+TGG | 0.425515 | 1_3:+5858544 | Msa0099660:CDS |
GGAAACCTTAGCTACAGAAT+TGG | 0.426314 | 1_3:-5858230 | None:intergenic |
CATTTCTTTGGAGTCTATGA+TGG | 0.430905 | 1_3:+5858967 | Msa0099660:CDS |
ATCAACCTTTAAGAAACAAT+TGG | 0.433425 | 1_3:-5859212 | None:intergenic |
GTTGTCTCTATAGTTGATAA+AGG | 0.434512 | 1_3:+5857736 | Msa0099660:five_prime_UTR |
GTGAATCTTGACCCAGAGAT+TGG | 0.434954 | 1_3:+5858688 | Msa0099660:CDS |
TATGTTGCAAAAGTGAGGTT+TGG | 0.435759 | 1_3:+5862397 | Msa0099660:three_prime_UTR |
CAACGAAACTGTTGTAGGTT+CGG | 0.440145 | 1_3:+5858252 | Msa0099660:CDS |
ATCTGCCATCAGCTTAAATC+TGG | 0.441477 | 1_3:-5858194 | None:intergenic |
AAAAGGATCTTAAAATAAGA+AGG | 0.442926 | 1_3:-5857979 | None:intergenic |
TGATGGCCATGGTGGCTCTC+AGG | 0.443960 | 1_3:+5858984 | Msa0099660:CDS |
ATGTGGACGAAGACCAGAAA+TGG | 0.445581 | 1_3:+5858837 | Msa0099660:CDS |
GGAGAGTTGTGAGAAGAAGT+TGG | 0.445998 | 1_3:+5857767 | Msa0099660:five_prime_UTR |
AAAAGTCACTCAACCGGTAT+TGG | 0.448529 | 1_3:+5858324 | Msa0099660:CDS |
TTAAAGGTTGATGCAGAAGT+TGG | 0.451892 | 1_3:+5859223 | Msa0099660:CDS |
AGATGTAACTAATTTGTAAG+TGG | 0.456104 | 1_3:+5862313 | Msa0099660:three_prime_UTR |
ATTCATTCCTCGTGCGAAAG+AGG | 0.459888 | 1_3:+5861698 | Msa0099660:CDS |
ATGAATTGAACTTCTGGATC+CGG | 0.468005 | 1_3:-5861681 | None:intergenic |
CTGATAATACTTCAGAAGTT+GGG | 0.471233 | 1_3:+5858545 | Msa0099660:CDS |
TCTCCTTCCTTTACCAATAC+CGG | 0.472666 | 1_3:-5858337 | None:intergenic |
AATGGAGGTGTTGTTGTATG+TGG | 0.474679 | 1_3:+5858102 | Msa0099660:exon |
TCATCAGCTGCCTCAGGAAG+AGG | 0.476248 | 1_3:+5858744 | Msa0099660:CDS |
AAGTTAACCTCCCACCCCTT+TGG | 0.477491 | 1_3:-5858054 | None:intergenic |
TTTGTCAACGGTGTAGGGTC+TGG | 0.477798 | 1_3:-5857314 | None:intergenic |
TGAGAGAGACTAAATATAGT+TGG | 0.478260 | 1_3:+5857276 | Msa0099660:five_prime_UTR |
TTTAAGCTGATGGCAGATGC+AGG | 0.478440 | 1_3:+5858199 | Msa0099660:CDS |
ATCACCAATTAGCATCTGAA+TGG | 0.480260 | 1_3:-5858899 | None:intergenic |
ATTGTCCAATTCTGTAGCTA+AGG | 0.487066 | 1_3:+5858225 | Msa0099660:CDS |
GTTTCCAACGAAACTGTTGT+AGG | 0.489820 | 1_3:+5858247 | Msa0099660:CDS |
ATCATAGACTCCAAAGAAAT+GGG | 0.490546 | 1_3:-5858965 | None:intergenic |
CACTCAACCGGTATTGGTAA+AGG | 0.490791 | 1_3:+5858330 | Msa0099660:CDS |
CAACATAATTGAAAGGGAGA+TGG | 0.494861 | 1_3:-5862381 | None:intergenic |
CCAAAGAAATGGGTCATTTG+CGG | 0.495267 | 1_3:-5858955 | None:intergenic |
GTCAGTGAAAACAGTAGTAT+AGG | 0.500348 | 1_3:+5858502 | Msa0099660:CDS |
AAGGTTGATGCAGAAGTTGG+AGG | 0.502623 | 1_3:+5859226 | Msa0099660:CDS |
AAACACCGGTTTATTCCATC+AGG | 0.504331 | 1_3:-5858928 | None:intergenic |
TTTGGCTAGTGATGGTCTAT+GGG | 0.504817 | 1_3:+5861734 | Msa0099660:CDS |
AGTTGCTCATCAGCTGCCTC+AGG | 0.504892 | 1_3:+5858738 | Msa0099660:CDS |
TTGCTCACACCGCTGATTTG+GGG | 0.507921 | 1_3:+5858617 | Msa0099660:CDS |
AAACGAAGAGGTGTGTGATC+TGG | 0.509657 | 1_3:+5861767 | Msa0099660:CDS |
TCTGGATCCGGAATAATTGA+CGG | 0.509776 | 1_3:-5861669 | None:intergenic |
ACTACCCTCGGAAAGGGGAG+AGG | 0.509832 | 1_3:+5861833 | Msa0099660:CDS |
ATACCTGAGTGATGTCTTGA+TGG | 0.511140 | 1_3:-5857048 | None:intergenic |
CATGGAACTACCCTCGGAAA+GGG | 0.512080 | 1_3:+5861827 | Msa0099660:CDS |
TATTACAAAAGTCACTCAAC+CGG | 0.514290 | 1_3:+5858318 | Msa0099660:CDS |
CCTCACAGAGCCTTTGTACT+CGG | 0.514596 | 1_3:-5862252 | None:intergenic |
TCACCAATTAGCATCTGAAT+GGG | 0.516982 | 1_3:-5858898 | None:intergenic |
TGATGTCTTGATGGGTAAGT+GGG | 0.518056 | 1_3:-5857039 | None:intergenic |
GGTGTTGTTGTATGTGGTTA+CGG | 0.519900 | 1_3:+5858108 | Msa0099660:CDS |
TGTCTAGCTAGGGATTTCAA+TGG | 0.521186 | 1_3:+5858084 | Msa0099660:exon |
TCAACGGTGTAGGGTCTGGT+TGG | 0.523225 | 1_3:-5857310 | None:intergenic |
TCAGATCTGCTCAACAATAA+CGG | 0.524626 | 1_3:-5857850 | None:intergenic |
TTCTTTGCCACGACAAAGAA+CGG | 0.525190 | 1_3:-5859356 | None:intergenic |
GATGATTCATTATCATTGGA+AGG | 0.525235 | 1_3:+5858442 | Msa0099660:CDS |
TCTCCTTCACTGTAGTGCAT+TGG | 0.527602 | 1_3:+5862128 | Msa0099660:three_prime_UTR |
TCGAATCGCGCTCTCCAGAA+AGG | 0.530906 | 1_3:+5861894 | Msa0099660:CDS |
CGAACCTACAACAGTTTCGT+TGG | 0.535696 | 1_3:-5858251 | None:intergenic |
TCGAGAGCCGTTCTTTGTCG+TGG | 0.537353 | 1_3:+5859349 | Msa0099660:CDS |
TCGGACGATTGTCATAATAA+GGG | 0.538946 | 1_3:+5858271 | Msa0099660:CDS |
GAACGAGTGTAACAGTTGTC+CGG | 0.539242 | 1_3:+5858767 | Msa0099660:CDS |
TTTGGAGTCTATGATGGCCA+TGG | 0.539364 | 1_3:+5858973 | Msa0099660:CDS |
CTATAGGGTCTCCTTAGGAA+TGG | 0.539724 | 1_3:+5857946 | Msa0099660:five_prime_UTR |
TCAATTAGTTGAAACATGAA+AGG | 0.540711 | 1_3:+5858021 | Msa0099660:five_prime_UTR |
CTACCCTCGGAAAGGGGAGA+GGG | 0.541861 | 1_3:+5861834 | Msa0099660:CDS |
CTGATTCAACTCCAATCTCT+GGG | 0.546780 | 1_3:-5858699 | None:intergenic |
ACGCAGTTGCAACTGTTCCT+CGG | 0.546920 | 1_3:+5858863 | Msa0099660:CDS |
ATCGATGGAGGTCTCAAAGA+TGG | 0.546981 | 1_3:+5859160 | Msa0099660:CDS |
TGGTCCACTGATAACGCCAT+TGG | 0.547435 | 1_3:-5859379 | None:intergenic |
CATCAGCTGCCTCAGGAAGA+GGG | 0.548267 | 1_3:+5858745 | Msa0099660:CDS |
CTAAATATAGTTGGAAGTGA+AGG | 0.553507 | 1_3:+5857285 | Msa0099660:five_prime_UTR |
ATTGGTGATCGAGTACCTGA+TGG | 0.554508 | 1_3:+5858913 | Msa0099660:CDS |
GAGTACCTGATGGAATAAAC+CGG | 0.557358 | 1_3:+5858923 | Msa0099660:CDS |
TCAATTATGTTGCAAAAGTG+AGG | 0.557438 | 1_3:+5862392 | Msa0099660:three_prime_UTR |
GGTGTTTAGAATTGGAAGCA+AGG | 0.557598 | 1_3:-5857018 | None:intergenic |
CTCAATCATAGCTACACACA+TGG | 0.557755 | 1_3:+5858165 | Msa0099660:CDS |
GTGATGTCTTGATGGGTAAG+TGG | 0.558970 | 1_3:-5857040 | None:intergenic |
CGAGGAAATAAAACTTGTCA+AGG | 0.560205 | 1_3:+5859129 | Msa0099660:CDS |
AAAGGATCTTAAAATAAGAA+GGG | 0.567307 | 1_3:-5857978 | None:intergenic |
TGGGATATCATATCCATCAA+AGG | 0.572598 | 1_3:-5858364 | None:intergenic |
CATTCATCCTCTTTCGCACG+AGG | 0.572975 | 1_3:-5861705 | None:intergenic |
TTCTCTATGTCTATCGAACA+TGG | 0.573710 | 1_3:-5858571 | None:intergenic |
TTGGATTATACCCCATTATG+GGG | 0.575592 | 1_3:+5858802 | Msa0099660:CDS |
TTGTCGTGGCAAAGAACCAA+TGG | 0.576382 | 1_3:+5859363 | Msa0099660:CDS |
CAAGATTCACTGCCACAGCA+AGG | 0.577058 | 1_3:-5858675 | None:intergenic |
TTGTTCTTATACTTTCGTTG+AGG | 0.577678 | 1_3:-5861957 | None:intergenic |
AAGATTCACTGCCACAGCAA+GGG | 0.578634 | 1_3:-5858674 | None:intergenic |
ACTACCCTCTCCCCTTTCCG+AGG | 0.579476 | 1_3:-5861838 | None:intergenic |
AAGATGGTTGCCAAGATCAG+TGG | 0.579539 | 1_3:+5859176 | Msa0099660:CDS |
AGTACAGAGGATGAATGCCC+TGG | 0.580491 | 1_3:-5862069 | None:intergenic |
TATGCAAGAATTGAAGCAGC+CGG | 0.584084 | 1_3:+5859509 | Msa0099660:CDS |
TGCTCACACCGCTGATTTGG+GGG | 0.585335 | 1_3:+5858618 | Msa0099660:CDS |
CTAGCTAGGGATTTCAATGG+AGG | 0.591613 | 1_3:+5858087 | Msa0099660:exon |
AGATTCACTGCCACAGCAAG+GGG | 0.592961 | 1_3:-5858673 | None:intergenic |
GCATGGAACTACCCTCGGAA+AGG | 0.594104 | 1_3:+5861826 | Msa0099660:CDS |
AAACGGCATGGAACTACCCT+CGG | 0.595649 | 1_3:+5861821 | Msa0099660:CDS |
AGAACCAATGGCGTTATCAG+TGG | 0.595715 | 1_3:+5859375 | Msa0099660:CDS |
AATCCAATGCACTACAGTGA+AGG | 0.601510 | 1_3:-5862131 | None:intergenic |
GTCAAGGAAAGTCTAATCGA+TGG | 0.602817 | 1_3:+5859145 | Msa0099660:CDS |
TATAAGAGCAACAACAGCAG+TGG | 0.605251 | 1_3:-5859290 | None:intergenic |
AGTGAAAACAGTAGTATAGG+TGG | 0.606908 | 1_3:+5858505 | Msa0099660:CDS |
TGTGATACCAAAGGGGTGGG+AGG | 0.608389 | 1_3:+5858047 | Msa0099660:five_prime_UTR |
TGTATCCAGATTTAAGCTGA+TGG | 0.613837 | 1_3:+5858189 | Msa0099660:CDS |
GTTACGGTGTCAATAAGAGT+AGG | 0.615266 | 1_3:+5858124 | Msa0099660:CDS |
ATGGAACTACCCTCGGAAAG+GGG | 0.615281 | 1_3:+5861828 | Msa0099660:CDS |
TACTATAATACATCTTACAT+AGG | 0.617454 | 1_3:+5862088 | Msa0099660:three_prime_UTR |
TTACATCTTTATAAACACAC+TGG | 0.617919 | 1_3:-5862298 | None:intergenic |
CAACCGGTATTGGTAAAGGA+AGG | 0.622193 | 1_3:+5858334 | Msa0099660:CDS |
CTACCCTCTCCCCTTTCCGA+GGG | 0.624958 | 1_3:-5861837 | None:intergenic |
CAACATCACTGTGATTGTTG+TGG | 0.626755 | 1_3:+5861926 | Msa0099660:CDS |
ATCATCATCCTCACTTTCTG+GGG | 0.630351 | 1_3:-5858425 | None:intergenic |
GGAAAAGTGATACAGTGGAA+TGG | 0.631701 | 1_3:+5859533 | Msa0099660:CDS |
GAAGAAGTTGGTTATGCTTG+TGG | 0.633912 | 1_3:+5857779 | Msa0099660:five_prime_UTR |
ACACTCGTTCCCTCTTCCTG+AGG | 0.634544 | 1_3:-5858754 | None:intergenic |
ACGATTAGCCCCAGAAAGTG+AGG | 0.636780 | 1_3:+5858417 | Msa0099660:CDS |
AGTTTACCTGAGAGCCACCA+TGG | 0.637746 | 1_3:-5858990 | None:intergenic |
TGGGGATTCATATCACTATG+TGG | 0.637964 | 1_3:+5858820 | Msa0099660:CDS |
GGAGTCTATGATGGCCATGG+TGG | 0.638051 | 1_3:+5858976 | Msa0099660:CDS |
TTAAGCTGATGGCAGATGCA+GGG | 0.638908 | 1_3:+5858200 | Msa0099660:CDS |
TATTATGCCTCCGAGTACAA+AGG | 0.640166 | 1_3:+5862242 | Msa0099660:three_prime_UTR |
TAAGATGTATTATAGTACAG+AGG | 0.640406 | 1_3:-5862082 | None:intergenic |
GTTGTTGCGCCAGAAACTGT+TGG | 0.640473 | 1_3:+5859265 | Msa0099660:CDS |
GACGATTGTCATAATAAGGG+TGG | 0.641173 | 1_3:+5858274 | Msa0099660:CDS |
CCGGAGGAAAAGTGATACAG+TGG | 0.650164 | 1_3:+5859528 | Msa0099660:CDS |
ATAATTGAAAGGGAGATGGA+TGG | 0.650716 | 1_3:-5862377 | None:intergenic |
CACAGAGCCTTTGTACTCGG+AGG | 0.655282 | 1_3:-5862249 | None:intergenic |
CATATTATAGTTGCAAACTG+TGG | 0.656409 | 1_3:+5859322 | Msa0099660:CDS |
TACCTGAGTGATGTCTTGAT+GGG | 0.665263 | 1_3:-5857047 | None:intergenic |
TGATATGAATCCCCATAATG+GGG | 0.675948 | 1_3:-5858812 | None:intergenic |
GCAAGAATTGAAGCAGCCGG+AGG | 0.679321 | 1_3:+5859512 | Msa0099660:CDS |
AAGGAAAGTCTAATCGATGG+AGG | 0.680492 | 1_3:+5859148 | Msa0099660:CDS |
TATGAATGAACCCCTTGCTG+TGG | 0.687921 | 1_3:+5858663 | Msa0099660:CDS |
TACCCATCAAGACATCACTC+AGG | 0.689508 | 1_3:+5857045 | Msa0099660:five_prime_UTR |
TAGTTGATAAAGGTAGACAA+AGG | 0.698398 | 1_3:+5857746 | Msa0099660:five_prime_UTR |
CATCCATATTGCATTGACCG+AGG | 0.698699 | 1_3:+5859111 | Msa0099660:CDS |
CCGAGTACAAAGGCTCTGTG+AGG | 0.707586 | 1_3:+5862252 | Msa0099660:three_prime_UTR |
CAAGAACACCAAATACACGA+TGG | 0.734296 | 1_3:-5859556 | None:intergenic |
GGATGTGATGACAAACGAAG+AGG | 0.744441 | 1_3:+5861755 | Msa0099660:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ACATTTTTAAGATAAAATTT+AGG | + | chr1_3:5860266-5860285 | Msa0099660:intron | 10.0% |
!!! | GTTTAATTTTTTTATTTGAA+TGG | + | chr1_3:5861458-5861477 | Msa0099660:intron | 10.0% |
!! | AAAGAGACAAATTTAAAAAA+GGG | - | chr1_3:5857625-5857644 | None:intergenic | 15.0% |
!! | AAAAGAGACAAATTTAAAAA+AGG | - | chr1_3:5857626-5857645 | None:intergenic | 15.0% |
!!! | TAAATTTGTCTCTTTTTAAT+TGG | + | chr1_3:5857630-5857649 | Msa0099660:intron | 15.0% |
!!! | TTGTATTTTTATATGTTTTC+AGG | + | chr1_3:5857701-5857720 | Msa0099660:intron | 15.0% |
!! | TATTTATTGAAATTGAAGTT+TGG | + | chr1_3:5857825-5857844 | Msa0099660:five_prime_UTR | 15.0% |
!!! | AACTAAAACACTTTTATTTT+GGG | - | chr1_3:5858386-5858405 | None:intergenic | 15.0% |
!!! | ATGATAAATTTTACTTCATT+TGG | + | chr1_3:5859611-5859630 | Msa0099660:intron | 15.0% |
!! | AAGTTTATTCCATAAATTAT+AGG | + | chr1_3:5859983-5860002 | Msa0099660:intron | 15.0% |
!!! | TGTTTTTCCATTTAATTAAT+TGG | + | chr1_3:5860728-5860747 | Msa0099660:intron | 15.0% |
!! | TAAAAAAATTAGGATCAAAA+TGG | - | chr1_3:5860885-5860904 | None:intergenic | 15.0% |
!! | TCTAAAAACTAAAAATAAAG+TGG | - | chr1_3:5861013-5861032 | None:intergenic | 15.0% |
!! | AAAGGATCTTAAAATAAGAA+GGG | - | chr1_3:5857981-5858000 | None:intergenic | 20.0% |
!! | AAAAGGATCTTAAAATAAGA+AGG | - | chr1_3:5857982-5858001 | None:intergenic | 20.0% |
!!! | CAACTAAAACACTTTTATTT+TGG | - | chr1_3:5858387-5858406 | None:intergenic | 20.0% |
!! | CATAATAAATAAGCATGTAT+CGG | - | chr1_3:5859710-5859729 | None:intergenic | 20.0% |
!! | ATAAACCAGTACAAAATAAT+TGG | + | chr1_3:5860042-5860061 | Msa0099660:intron | 20.0% |
!!! | TAATTTTTCCTCACATAATT+CGG | + | chr1_3:5860076-5860095 | Msa0099660:intron | 20.0% |
!!! | AGAGTTGTTTTTCTTTTTTT+AGG | + | chr1_3:5860588-5860607 | Msa0099660:intron | 20.0% |
!!! | GAGTTGTTTTTCTTTTTTTA+GGG | + | chr1_3:5860589-5860608 | Msa0099660:intron | 20.0% |
!! | AATCATGTGTACTAATTTAA+GGG | + | chr1_3:5860660-5860679 | Msa0099660:intron | 20.0% |
!! | GTACTTTATTAAGAAATGAA+TGG | + | chr1_3:5860691-5860710 | Msa0099660:intron | 20.0% |
!! | ACGAAATCCAATTAATTAAA+TGG | - | chr1_3:5860738-5860757 | None:intergenic | 20.0% |
!!! | TTTCAAGCTCTAAAAAAATT+AGG | - | chr1_3:5860895-5860914 | None:intergenic | 20.0% |
!!! | TATCTTAATATTTCTGATGA+TGG | + | chr1_3:5861273-5861292 | Msa0099660:intron | 20.0% |
!! | TAATTGTGTTGTGTTTATAA+AGG | + | chr1_3:5861591-5861610 | Msa0099660:intron | 20.0% |
!! | TACTATAATACATCTTACAT+AGG | + | chr1_3:5862088-5862107 | Msa0099660:three_prime_UTR | 20.0% |
!! | TAAATTTAGTTGCTTATTCT+AGG | + | chr1_3:5862164-5862183 | Msa0099660:three_prime_UTR | 20.0% |
!! | AATATGCTAAAAAATGTCAA+AGG | - | chr1_3:5862214-5862233 | None:intergenic | 20.0% |
!!! | TACCTAATTTTGTTTGTCAA+CGG | - | chr1_3:5857329-5857348 | None:intergenic | 25.0% |
!!! | AAAAGGGTTGTTATCTTTTT+TGG | + | chr1_3:5857495-5857514 | Msa0099660:intron | 25.0% |
! | TTTCTTGTGTTTGTAGATAA+GGG | + | chr1_3:5857582-5857601 | Msa0099660:intron | 25.0% |
!!! | ATTTGTCTCTTTTTAATTGG+TGG | + | chr1_3:5857633-5857652 | Msa0099660:intron | 25.0% |
!!! | TTTGTCTCTTTTTAATTGGT+GGG | + | chr1_3:5857634-5857653 | Msa0099660:intron | 25.0% |
! | TCAATTAGTTGAAACATGAA+AGG | + | chr1_3:5858021-5858040 | Msa0099660:five_prime_UTR | 25.0% |
!! | GAGCTTAATTTTTCTCATTT+AGG | + | chr1_3:5859066-5859085 | Msa0099660:intron | 25.0% |
!! | TTTCACCAATTGTTTCTTAA+AGG | + | chr1_3:5859207-5859226 | Msa0099660:CDS | 25.0% |
!! | ATCAACCTTTAAGAAACAAT+TGG | - | chr1_3:5859215-5859234 | None:intergenic | 25.0% |
! | TAAAATTACAAACTCCAACA+CGG | + | chr1_3:5859643-5859662 | Msa0099660:intron | 25.0% |
!! | TCTTTTAGTCAGTTATTTAG+AGG | + | chr1_3:5860417-5860436 | Msa0099660:intron | 25.0% |
!! | CTTTTAGTCAGTTATTTAGA+GGG | + | chr1_3:5860418-5860437 | Msa0099660:intron | 25.0% |
! | TACACATGATTGATATAAAC+TGG | - | chr1_3:5860651-5860670 | None:intergenic | 25.0% |
! | CAATCATGTGTACTAATTTA+AGG | + | chr1_3:5860659-5860678 | Msa0099660:intron | 25.0% |
! | GATGATTAATAAGCAGTAAA+TGG | - | chr1_3:5860838-5860857 | None:intergenic | 25.0% |
! | CTTATTAATCATCCTTGAAT+GGG | + | chr1_3:5860845-5860864 | Msa0099660:intron | 25.0% |
! | TTATTAATCATCCTTGAATG+GGG | + | chr1_3:5860846-5860865 | Msa0099660:intron | 25.0% |
!!! | AATTTAGTTTGATCATTCCT+CGG | + | chr1_3:5861117-5861136 | Msa0099660:intron | 25.0% |
! | AACAAAACATGATGATTTCA+AGG | + | chr1_3:5861975-5861994 | Msa0099660:exon | 25.0% |
! | TAAGATGTATTATAGTACAG+AGG | - | chr1_3:5862085-5862104 | None:intergenic | 25.0% |
! | TTACATCTTTATAAACACAC+TGG | - | chr1_3:5862301-5862320 | None:intergenic | 25.0% |
!! | AGATGTAACTAATTTGTAAG+TGG | + | chr1_3:5862313-5862332 | Msa0099660:three_prime_UTR | 25.0% |
!! | CTTTTGCAACATAATTGAAA+GGG | - | chr1_3:5862390-5862409 | None:intergenic | 25.0% |
!! | ACTTTTGCAACATAATTGAA+AGG | - | chr1_3:5862391-5862410 | None:intergenic | 25.0% |
!! | ACTGAGCTGTTTTCATTTAA+TGG | + | chr1_3:5857121-5857140 | Msa0099660:intron | 30.0% |
!! | CTGAGCTGTTTTCATTTAAT+GGG | + | chr1_3:5857122-5857141 | Msa0099660:intron | 30.0% |
TGGGTCAAGATTATTAAGTA+AGG | + | chr1_3:5857141-5857160 | Msa0099660:intron | 30.0% | |
GGGTCAAGATTATTAAGTAA+GGG | + | chr1_3:5857142-5857161 | Msa0099660:intron | 30.0% | |
TGAGAGAGACTAAATATAGT+TGG | + | chr1_3:5857276-5857295 | Msa0099660:five_prime_UTR | 30.0% | |
CTAAATATAGTTGGAAGTGA+AGG | + | chr1_3:5857285-5857304 | Msa0099660:five_prime_UTR | 30.0% | |
!!! | TTAAGACTTTGCACTTTTTC+TGG | + | chr1_3:5857533-5857552 | Msa0099660:intron | 30.0% |
!!! | TAAGACTTTGCACTTTTTCT+GGG | + | chr1_3:5857534-5857553 | Msa0099660:intron | 30.0% |
CTTTCTTGTGTTTGTAGATA+AGG | + | chr1_3:5857581-5857600 | Msa0099660:intron | 30.0% | |
TTCTTGTGTTTGTAGATAAG+GGG | + | chr1_3:5857583-5857602 | Msa0099660:intron | 30.0% | |
!! | TTGTCTCTTTTTAATTGGTG+GGG | + | chr1_3:5857635-5857654 | Msa0099660:intron | 30.0% |
TCAACTATAGAGACAACAAT+TGG | - | chr1_3:5857733-5857752 | None:intergenic | 30.0% | |
!! | GTTGTCTCTATAGTTGATAA+AGG | + | chr1_3:5857736-5857755 | Msa0099660:five_prime_UTR | 30.0% |
!! | TAGTTGATAAAGGTAGACAA+AGG | + | chr1_3:5857746-5857765 | Msa0099660:five_prime_UTR | 30.0% |
! | TTTTGCTTCTTTTGTCCTAT+AGG | + | chr1_3:5857930-5857949 | Msa0099660:five_prime_UTR | 30.0% |
! | TTTGCTTCTTTTGTCCTATA+GGG | + | chr1_3:5857931-5857950 | Msa0099660:five_prime_UTR | 30.0% |
!! | AAAGGTTTTGTGATACCAAA+GGG | + | chr1_3:5858039-5858058 | Msa0099660:five_prime_UTR | 30.0% |
TATTACAAAAGTCACTCAAC+CGG | + | chr1_3:5858318-5858337 | Msa0099660:CDS | 30.0% | |
GGATGATGATTCATTATCAT+TGG | + | chr1_3:5858438-5858457 | Msa0099660:CDS | 30.0% | |
GATGATTCATTATCATTGGA+AGG | + | chr1_3:5858442-5858461 | Msa0099660:CDS | 30.0% | |
TCTGATAATACTTCAGAAGT+TGG | + | chr1_3:5858544-5858563 | Msa0099660:CDS | 30.0% | |
CTGATAATACTTCAGAAGTT+GGG | + | chr1_3:5858545-5858564 | Msa0099660:CDS | 30.0% | |
AATCCAATTCAAAAACACTC+CGG | - | chr1_3:5858789-5858808 | None:intergenic | 30.0% | |
AATTGGATTATACCCCATTA+TGG | + | chr1_3:5858800-5858819 | Msa0099660:CDS | 30.0% | |
ATTGGATTATACCCCATTAT+GGG | + | chr1_3:5858801-5858820 | Msa0099660:CDS | 30.0% | |
ATCATAGACTCCAAAGAAAT+GGG | - | chr1_3:5858968-5858987 | None:intergenic | 30.0% | |
!!! | CTTGACAAGTTTTATTTCCT+CGG | - | chr1_3:5859131-5859150 | None:intergenic | 30.0% |
!!! | AAACTTTTTTCCACTGATCT+TGG | - | chr1_3:5859189-5859208 | None:intergenic | 30.0% |
CATATTATAGTTGCAAACTG+TGG | + | chr1_3:5859322-5859341 | Msa0099660:CDS | 30.0% | |
TCTAGAAGCAACTTACTTTA+TGG | - | chr1_3:5859402-5859421 | None:intergenic | 30.0% | |
TTCTTGCATATTCATCTTCT+CGG | - | chr1_3:5859499-5859518 | None:intergenic | 30.0% | |
!! | AAACACTTTTTGGACATTGA+GGG | - | chr1_3:5859816-5859835 | None:intergenic | 30.0% |
!! | TAAACACTTTTTGGACATTG+AGG | - | chr1_3:5859817-5859836 | None:intergenic | 30.0% |
!! | CAATGTCCAAAAAGTGTTTA+AGG | + | chr1_3:5859817-5859836 | Msa0099660:intron | 30.0% |
AACAAAGAGAGAGAAAAAGT+TGG | + | chr1_3:5859848-5859867 | Msa0099660:intron | 30.0% | |
CCTCTTACACCTATAATTTA+TGG | - | chr1_3:5859995-5860014 | None:intergenic | 30.0% | |
CCATAAATTATAGGTGTAAG+AGG | + | chr1_3:5859992-5860011 | Msa0099660:intron | 30.0% | |
AAATTATAGGTGTAAGAGGT+TGG | + | chr1_3:5859996-5860015 | Msa0099660:intron | 30.0% | |
!! | CCAAACCAATTATTTTGTAC+TGG | - | chr1_3:5860050-5860069 | None:intergenic | 30.0% |
CCAGTACAAAATAATTGGTT+TGG | + | chr1_3:5860047-5860066 | Msa0099660:intron | 30.0% | |
ACACACTGTAAATGATTCAA+AGG | + | chr1_3:5860450-5860469 | Msa0099660:intron | 30.0% | |
!! | GGTATCTTTAGTTCTAAAGA+GGG | + | chr1_3:5860485-5860504 | Msa0099660:intron | 30.0% |
!! | TAGAGGTATCTTCTATAATC+TGG | + | chr1_3:5860518-5860537 | Msa0099660:intron | 30.0% |
TACACAGGATTGATATAAAC+TGG | - | chr1_3:5860545-5860564 | None:intergenic | 30.0% | |
TCAATCCTGTGTACTAATTT+CGG | + | chr1_3:5860552-5860571 | Msa0099660:intron | 30.0% | |
!! | GTTGTTGATTACTCAACTTT+TGG | + | chr1_3:5860624-5860643 | Msa0099660:intron | 30.0% |
! | ACTGATTCAGAATTTCAGAT+GGG | - | chr1_3:5860802-5860821 | None:intergenic | 30.0% |
! | ATCTGAAATTCTGAATCAGT+GGG | + | chr1_3:5860802-5860821 | Msa0099660:intron | 30.0% |
GCTTATTAATCATCCTTGAA+TGG | + | chr1_3:5860844-5860863 | Msa0099660:intron | 30.0% | |
!! | ATATTTGTTTTCCCCATTCA+AGG | - | chr1_3:5860860-5860879 | None:intergenic | 30.0% |
! | ATAACCTATTTTCCCTTTGT+AGG | + | chr1_3:5860916-5860935 | Msa0099660:intron | 30.0% |
ATTCGTCATTTATGTTCAAC+AGG | - | chr1_3:5860970-5860989 | None:intergenic | 30.0% | |
GAGGAATGATCAAACTAAAT+TGG | - | chr1_3:5861118-5861137 | None:intergenic | 30.0% | |
AAGGATACTGTATGAAAAGA+GGG | - | chr1_3:5861194-5861213 | None:intergenic | 30.0% | |
ACTTGATTCTCTTAGAACTA+CGG | - | chr1_3:5861435-5861454 | None:intergenic | 30.0% | |
GAATGGAAAATGCACAAAAT+AGG | + | chr1_3:5861475-5861494 | Msa0099660:intron | 30.0% | |
AATCAAATACACAAGCAAGT+TGG | - | chr1_3:5861558-5861577 | None:intergenic | 30.0% | |
AAACACAACACAATTACTGT+GGG | - | chr1_3:5861587-5861606 | None:intergenic | 30.0% | |
TAAACACAACACAATTACTG+TGG | - | chr1_3:5861588-5861607 | None:intergenic | 30.0% | |
! | TTTGAAACCGTCAATTATTC+CGG | + | chr1_3:5861662-5861681 | Msa0099660:CDS | 30.0% |
CTTCTTTGGTACAAGAAAAA+CGG | + | chr1_3:5861804-5861823 | Msa0099660:CDS | 30.0% | |
TTGTTCTTATACTTTCGTTG+AGG | - | chr1_3:5861960-5861979 | None:intergenic | 30.0% | |
! | TTGCTTATTCTAGGAATGAT+AGG | + | chr1_3:5862173-5862192 | Msa0099660:three_prime_UTR | 30.0% |
! | CTAAAAAATGTCAAAGGCAT+TGG | - | chr1_3:5862208-5862227 | None:intergenic | 30.0% |
TCAATTATGTTGCAAAAGTG+AGG | + | chr1_3:5862392-5862411 | Msa0099660:three_prime_UTR | 30.0% | |
!!! | TTTGCTTTTTCCCAATCCAT+GGG | + | chr1_3:5857226-5857245 | Msa0099660:intron | 35.0% |
!! | TTTTGTTTGTCAACGGTGTA+GGG | - | chr1_3:5857322-5857341 | None:intergenic | 35.0% |
!! | ATTTTGTTTGTCAACGGTGT+AGG | - | chr1_3:5857323-5857342 | None:intergenic | 35.0% |
CACCGTTGACAAACAAAATT+AGG | + | chr1_3:5857324-5857343 | Msa0099660:five_prime_UTR | 35.0% | |
AGGCAACTCTATGTGAAAAA+GGG | + | chr1_3:5857479-5857498 | Msa0099660:intron | 35.0% | |
!!! | GGGGTTTTAATTTTCTTGAG+TGG | + | chr1_3:5857654-5857673 | Msa0099660:intron | 35.0% |
TCAGATCTGCTCAACAATAA+CGG | - | chr1_3:5857853-5857872 | None:intergenic | 35.0% | |
! | GGTAACATTTTCCATTCCTA+AGG | - | chr1_3:5857960-5857979 | None:intergenic | 35.0% |
! | TCCTTTTCAATCAGAAAAGC+AGG | + | chr1_3:5857995-5858014 | Msa0099660:five_prime_UTR | 35.0% |
!! | ACCTGCTTTTCTGATTGAAA+AGG | - | chr1_3:5857999-5858018 | None:intergenic | 35.0% |
!! | GAAAGGTTTTGTGATACCAA+AGG | + | chr1_3:5858038-5858057 | Msa0099660:five_prime_UTR | 35.0% |
!! | AAGGTTTTGTGATACCAAAG+GGG | + | chr1_3:5858040-5858059 | Msa0099660:five_prime_UTR | 35.0% |
! | ACTTTTTGTCTTGTCTAGCT+AGG | + | chr1_3:5858073-5858092 | Msa0099660:five_prime_UTR | 35.0% |
! | CTTTTTGTCTTGTCTAGCTA+GGG | + | chr1_3:5858074-5858093 | Msa0099660:five_prime_UTR | 35.0% |
TGTATCCAGATTTAAGCTGA+TGG | + | chr1_3:5858189-5858208 | Msa0099660:CDS | 35.0% | |
ATTGTCCAATTCTGTAGCTA+AGG | + | chr1_3:5858225-5858244 | Msa0099660:CDS | 35.0% | |
TTCGGACGATTGTCATAATA+AGG | + | chr1_3:5858270-5858289 | Msa0099660:CDS | 35.0% | |
TCGGACGATTGTCATAATAA+GGG | + | chr1_3:5858271-5858290 | Msa0099660:CDS | 35.0% | |
TCATAATAAGGGTGGCAATT+TGG | + | chr1_3:5858282-5858301 | Msa0099660:CDS | 35.0% | |
GGCAATTTGGATGTTGAAAT+CGG | + | chr1_3:5858295-5858314 | Msa0099660:CDS | 35.0% | |
TGGGATATCATATCCATCAA+AGG | - | chr1_3:5858367-5858386 | None:intergenic | 35.0% | |
AATCATCATCCTCACTTTCT+GGG | - | chr1_3:5858429-5858448 | None:intergenic | 35.0% | |
GTCAGTGAAAACAGTAGTAT+AGG | + | chr1_3:5858502-5858521 | Msa0099660:CDS | 35.0% | |
AGTGAAAACAGTAGTATAGG+TGG | + | chr1_3:5858505-5858524 | Msa0099660:CDS | 35.0% | |
TTCTCTATGTCTATCGAACA+TGG | - | chr1_3:5858574-5858593 | None:intergenic | 35.0% | |
TTGGATTATACCCCATTATG+GGG | + | chr1_3:5858802-5858821 | Msa0099660:CDS | 35.0% | |
TGATATGAATCCCCATAATG+GGG | - | chr1_3:5858815-5858834 | None:intergenic | 35.0% | |
GTGATATGAATCCCCATAAT+GGG | - | chr1_3:5858816-5858835 | None:intergenic | 35.0% | |
AGTGATATGAATCCCCATAA+TGG | - | chr1_3:5858817-5858836 | None:intergenic | 35.0% | |
! | ATGGGAATTTCTAAAAACCG+AGG | - | chr1_3:5858883-5858902 | None:intergenic | 35.0% |
ATTCCCATTCAGATGCTAAT+TGG | + | chr1_3:5858895-5858914 | Msa0099660:CDS | 35.0% | |
TCACCAATTAGCATCTGAAT+GGG | - | chr1_3:5858901-5858920 | None:intergenic | 35.0% | |
ATCACCAATTAGCATCTGAA+TGG | - | chr1_3:5858902-5858921 | None:intergenic | 35.0% | |
! | ATGGAATAAACCGGTGTTTT+AGG | + | chr1_3:5858932-5858951 | Msa0099660:CDS | 35.0% |
CATCATAGACTCCAAAGAAA+TGG | - | chr1_3:5858969-5858988 | None:intergenic | 35.0% | |
!! | CATTTCTTTGGAGTCTATGA+TGG | + | chr1_3:5858967-5858986 | Msa0099660:CDS | 35.0% |
TCAGACAAGGCTAAAATCAA+CGG | - | chr1_3:5859031-5859050 | None:intergenic | 35.0% | |
AGTGAGAGTTTATTCAGACA+AGG | - | chr1_3:5859044-5859063 | None:intergenic | 35.0% | |
CGAGGAAATAAAACTTGTCA+AGG | + | chr1_3:5859129-5859148 | Msa0099660:CDS | 35.0% | |
!! | TTAAAGGTTGATGCAGAAGT+TGG | + | chr1_3:5859223-5859242 | Msa0099660:CDS | 35.0% |
CTTGCAATGTCAAGATCTAT+TGG | + | chr1_3:5859575-5859594 | Msa0099660:CDS | 35.0% | |
! | CCTAGATTTTCACATTAGCA+GGG | - | chr1_3:5859678-5859697 | None:intergenic | 35.0% |
! | TCCTAGATTTTCACATTAGC+AGG | - | chr1_3:5859679-5859698 | None:intergenic | 35.0% |
!! | AACACTTTTTGGACATTGAG+GGG | - | chr1_3:5859815-5859834 | None:intergenic | 35.0% |
! | GACACACCTTAAACACTTTT+TGG | - | chr1_3:5859826-5859845 | None:intergenic | 35.0% |
GAAAGTGAGAAGAGAGAAAA+GGG | - | chr1_3:5859875-5859894 | None:intergenic | 35.0% | |
AGAAAGTGAGAAGAGAGAAA+AGG | - | chr1_3:5859876-5859895 | None:intergenic | 35.0% | |
! | ATGCTAACTAAGACTTGGTT+TGG | - | chr1_3:5859907-5859926 | None:intergenic | 35.0% |
TGATCATGCTAACTAAGACT+TGG | - | chr1_3:5859912-5859931 | None:intergenic | 35.0% | |
GGTTTAATCCGAATTATGTG+AGG | - | chr1_3:5860087-5860106 | None:intergenic | 35.0% | |
! | CCAATGTTTCTTCATCGATT+TGG | - | chr1_3:5860108-5860127 | None:intergenic | 35.0% |
CCAAATCGATGAAGAAACAT+TGG | + | chr1_3:5860105-5860124 | Msa0099660:intron | 35.0% | |
! | TCGATGAAGAAACATTGGTT+TGG | + | chr1_3:5860110-5860129 | Msa0099660:intron | 35.0% |
AGATAAAGACATGTGTCCTA+CGG | + | chr1_3:5860318-5860337 | Msa0099660:intron | 35.0% | |
ATTCAAAGGAGAGATTAGAG+CGG | + | chr1_3:5860464-5860483 | Msa0099660:intron | 35.0% | |
!! | CGGTATCTTTAGTTCTAAAG+AGG | + | chr1_3:5860484-5860503 | Msa0099660:intron | 35.0% |
!!! | AAGAGGGATTTTGAGATTAG+AGG | + | chr1_3:5860501-5860520 | Msa0099660:intron | 35.0% |
AATTGGATTTCGTGAATGTG+AGG | + | chr1_3:5860745-5860764 | Msa0099660:intron | 35.0% | |
ATTGGATTTCGTGAATGTGA+GGG | + | chr1_3:5860746-5860765 | Msa0099660:intron | 35.0% | |
TGGGAACATAAAGTGATTTG+CGG | - | chr1_3:5860783-5860802 | None:intergenic | 35.0% | |
!! | CACTGATTCAGAATTTCAGA+TGG | - | chr1_3:5860803-5860822 | None:intergenic | 35.0% |
! | CATCTGAAATTCTGAATCAG+TGG | + | chr1_3:5860801-5860820 | Msa0099660:intron | 35.0% |
AATGCCTACAAAGGGAAAAT+AGG | - | chr1_3:5860923-5860942 | None:intergenic | 35.0% | |
AGGATACTGTATGAAAAGAG+GGG | - | chr1_3:5861193-5861212 | None:intergenic | 35.0% | |
GAAGGATACTGTATGAAAAG+AGG | - | chr1_3:5861195-5861214 | None:intergenic | 35.0% | |
CGAAAAATGTTTAACGCAGA+AGG | - | chr1_3:5861213-5861232 | None:intergenic | 35.0% | |
! | GCACAATGTTGAGAATCTTT+TGG | + | chr1_3:5861303-5861322 | Msa0099660:intron | 35.0% |
TGGAAAAGAACACTTGTCAT+TGG | + | chr1_3:5861323-5861342 | Msa0099660:intron | 35.0% | |
AACCACTAGCAAATTCAGAA+TGG | - | chr1_3:5861356-5861375 | None:intergenic | 35.0% | |
TGAAAATCACATCAAGGGTA+AGG | - | chr1_3:5861631-5861650 | None:intergenic | 35.0% | |
! | TTACCCTTGATGTGATTTTC+AGG | + | chr1_3:5861630-5861649 | Msa0099660:intron | 35.0% |
TCTCCTGAAAATCACATCAA+GGG | - | chr1_3:5861636-5861655 | None:intergenic | 35.0% | |
ATGAATTGAACTTCTGGATC+CGG | - | chr1_3:5861684-5861703 | None:intergenic | 35.0% | |
! | AGAGGATGAATGTCTCATTT+TGG | + | chr1_3:5861716-5861735 | Msa0099660:CDS | 35.0% |
CTCGAAAACGTATACTTCTT+TGG | + | chr1_3:5861790-5861809 | Msa0099660:CDS | 35.0% | |
! | TTGCCCATTAATTTTTCACC+AGG | + | chr1_3:5862051-5862070 | Msa0099660:three_prime_UTR | 35.0% |
! | TGCCCATTAATTTTTCACCA+GGG | + | chr1_3:5862052-5862071 | Msa0099660:three_prime_UTR | 35.0% |
TGCCCTGGTGAAAAATTAAT+GGG | - | chr1_3:5862057-5862076 | None:intergenic | 35.0% | |
ATGCCCTGGTGAAAAATTAA+TGG | - | chr1_3:5862058-5862077 | None:intergenic | 35.0% | |
ATAATTGAAAGGGAGATGGA+TGG | - | chr1_3:5862380-5862399 | None:intergenic | 35.0% | |
CAACATAATTGAAAGGGAGA+TGG | - | chr1_3:5862384-5862403 | None:intergenic | 35.0% | |
TATGTTGCAAAAGTGAGGTT+TGG | + | chr1_3:5862397-5862416 | Msa0099660:three_prime_UTR | 35.0% | |
! | GGTGTTTAGAATTGGAAGCA+AGG | - | chr1_3:5857021-5857040 | None:intergenic | 40.0% |
! | GGTAAGTGGGTGTTTAGAAT+TGG | - | chr1_3:5857029-5857048 | None:intergenic | 40.0% |
! | TGATGTCTTGATGGGTAAGT+GGG | - | chr1_3:5857042-5857061 | None:intergenic | 40.0% |
TACCTGAGTGATGTCTTGAT+GGG | - | chr1_3:5857050-5857069 | None:intergenic | 40.0% | |
ATACCTGAGTGATGTCTTGA+TGG | - | chr1_3:5857051-5857070 | None:intergenic | 40.0% | |
!!! | GTTTGCTTTTTCCCAATCCA+TGG | + | chr1_3:5857225-5857244 | Msa0099660:intron | 40.0% |
!! | CTTTTTCACATAGAGTTGCC+TGG | - | chr1_3:5857480-5857499 | None:intergenic | 40.0% |
CAGGCAACTCTATGTGAAAA+AGG | + | chr1_3:5857478-5857497 | Msa0099660:intron | 40.0% | |
! | GAAGAAGTTGGTTATGCTTG+TGG | + | chr1_3:5857779-5857798 | Msa0099660:five_prime_UTR | 40.0% |
! | TTTTGTGATACCAAAGGGGT+GGG | + | chr1_3:5858044-5858063 | Msa0099660:five_prime_UTR | 40.0% |
TGTCTAGCTAGGGATTTCAA+TGG | + | chr1_3:5858084-5858103 | Msa0099660:exon | 40.0% | |
!! | AATGGAGGTGTTGTTGTATG+TGG | + | chr1_3:5858102-5858121 | Msa0099660:exon | 40.0% |
!! | GGTGTTGTTGTATGTGGTTA+CGG | + | chr1_3:5858108-5858127 | Msa0099660:CDS | 40.0% |
! | GTTACGGTGTCAATAAGAGT+AGG | + | chr1_3:5858124-5858143 | Msa0099660:CDS | 40.0% |
CTCAATCATAGCTACACACA+TGG | + | chr1_3:5858165-5858184 | Msa0099660:CDS | 40.0% | |
ATCTGCCATCAGCTTAAATC+TGG | - | chr1_3:5858197-5858216 | None:intergenic | 40.0% | |
GGAAACCTTAGCTACAGAAT+TGG | - | chr1_3:5858233-5858252 | None:intergenic | 40.0% | |
GTTTCCAACGAAACTGTTGT+AGG | + | chr1_3:5858247-5858266 | Msa0099660:CDS | 40.0% | |
CAACGAAACTGTTGTAGGTT+CGG | + | chr1_3:5858252-5858271 | Msa0099660:CDS | 40.0% | |
GACGATTGTCATAATAAGGG+TGG | + | chr1_3:5858274-5858293 | Msa0099660:CDS | 40.0% | |
AAAAGTCACTCAACCGGTAT+TGG | + | chr1_3:5858324-5858343 | Msa0099660:CDS | 40.0% | |
TCTCCTTCCTTTACCAATAC+CGG | - | chr1_3:5858340-5858359 | None:intergenic | 40.0% | |
ATCATCATCCTCACTTTCTG+GGG | - | chr1_3:5858428-5858447 | None:intergenic | 40.0% | |
GAATCATCATCCTCACTTTC+TGG | - | chr1_3:5858430-5858449 | None:intergenic | 40.0% | |
CTGATTCAACTCCAATCTCT+GGG | - | chr1_3:5858702-5858721 | None:intergenic | 40.0% | |
TCTGATTCAACTCCAATCTC+TGG | - | chr1_3:5858703-5858722 | None:intergenic | 40.0% | |
!! | TGTCCGGAGTGTTTTTGAAT+TGG | + | chr1_3:5858783-5858802 | Msa0099660:CDS | 40.0% |
TGGGGATTCATATCACTATG+TGG | + | chr1_3:5858820-5858839 | Msa0099660:CDS | 40.0% | |
GAGTACCTGATGGAATAAAC+CGG | + | chr1_3:5858923-5858942 | Msa0099660:CDS | 40.0% | |
!! | AAACACCGGTTTATTCCATC+AGG | - | chr1_3:5858931-5858950 | None:intergenic | 40.0% |
CCAAAGAAATGGGTCATTTG+CGG | - | chr1_3:5858958-5858977 | None:intergenic | 40.0% | |
TTTCCTCGGTCAATGCAATA+TGG | - | chr1_3:5859117-5859136 | None:intergenic | 40.0% | |
GTCAAGGAAAGTCTAATCGA+TGG | + | chr1_3:5859145-5859164 | Msa0099660:CDS | 40.0% | |
AAGGAAAGTCTAATCGATGG+AGG | + | chr1_3:5859148-5859167 | Msa0099660:CDS | 40.0% | |
TATAAGAGCAACAACAGCAG+TGG | - | chr1_3:5859293-5859312 | None:intergenic | 40.0% | |
TTCTTTGCCACGACAAAGAA+CGG | - | chr1_3:5859359-5859378 | None:intergenic | 40.0% | |
GCATATTCATCTTCTCGGTT+CGG | - | chr1_3:5859494-5859513 | None:intergenic | 40.0% | |
TATGCAAGAATTGAAGCAGC+CGG | + | chr1_3:5859509-5859528 | Msa0099660:CDS | 40.0% | |
GGAAAAGTGATACAGTGGAA+TGG | + | chr1_3:5859533-5859552 | Msa0099660:CDS | 40.0% | |
CAAGAACACCAAATACACGA+TGG | - | chr1_3:5859559-5859578 | None:intergenic | 40.0% | |
CCCTGCTAATGTGAAAATCT+AGG | + | chr1_3:5859675-5859694 | Msa0099660:intron | 40.0% | |
! | ATAGGTGTAAGAGGTTGGTT+TGG | + | chr1_3:5860001-5860020 | Msa0099660:intron | 40.0% |
!! | TGTAAGAGGTTGGTTTGGTT+CGG | + | chr1_3:5860006-5860025 | Msa0099660:intron | 40.0% |
GATAAAGACATGTGTCCTAC+GGG | + | chr1_3:5860319-5860338 | Msa0099660:intron | 40.0% | |
! | ACAAACACCTCTAGGAGATT+AGG | - | chr1_3:5860382-5860401 | None:intergenic | 40.0% |
ACAAAGACACAAACACCTCT+AGG | - | chr1_3:5860390-5860409 | None:intergenic | 40.0% | |
! | GAGGTGTTTGTGTCTTTGTT+TGG | + | chr1_3:5860391-5860410 | Msa0099660:intron | 40.0% |
GACTTCCGAAATTAGTACAC+AGG | - | chr1_3:5860560-5860579 | None:intergenic | 40.0% | |
TTGGATTTCGTGAATGTGAG+GGG | + | chr1_3:5860747-5860766 | Msa0099660:intron | 40.0% | |
! | GGAACATAAAGTGATTTGCG+GGG | - | chr1_3:5860781-5860800 | None:intergenic | 40.0% |
! | GGGAACATAAAGTGATTTGC+GGG | - | chr1_3:5860782-5860801 | None:intergenic | 40.0% |
TGACCAAAGATCATTGCAGA+AGG | + | chr1_3:5861061-5861080 | Msa0099660:intron | 40.0% | |
TTGCCTTCTGCAATGATCTT+TGG | - | chr1_3:5861067-5861086 | None:intergenic | 40.0% | |
TAATTTCCCTTAGCAGCCTT+TGG | - | chr1_3:5861150-5861169 | None:intergenic | 40.0% | |
GGATACTGTATGAAAAGAGG+GGG | - | chr1_3:5861192-5861211 | None:intergenic | 40.0% | |
!! | CACCATTCTGAATTTGCTAG+TGG | + | chr1_3:5861351-5861370 | Msa0099660:intron | 40.0% |
GTACCTTCTACTCGTAATTG+CGG | + | chr1_3:5861379-5861398 | Msa0099660:intron | 40.0% | |
TACCTTCTACTCGTAATTGC+GGG | + | chr1_3:5861380-5861399 | Msa0099660:intron | 40.0% | |
GTCTCCTGAAAATCACATCA+AGG | - | chr1_3:5861637-5861656 | None:intergenic | 40.0% | |
TCTGGATCCGGAATAATTGA+CGG | - | chr1_3:5861672-5861691 | None:intergenic | 40.0% | |
CGAGGAATGAATTGAACTTC+TGG | - | chr1_3:5861690-5861709 | None:intergenic | 40.0% | |
!!! | TGTCTCATTTTGGCTAGTGA+TGG | + | chr1_3:5861726-5861745 | Msa0099660:CDS | 40.0% |
!! | TTTTGGCTAGTGATGGTCTA+TGG | + | chr1_3:5861733-5861752 | Msa0099660:CDS | 40.0% |
TTTGGCTAGTGATGGTCTAT+GGG | + | chr1_3:5861734-5861753 | Msa0099660:CDS | 40.0% | |
TTGGTACAAGAAAAACGGCA+TGG | + | chr1_3:5861809-5861828 | Msa0099660:CDS | 40.0% | |
TGTTGTCTTTGCTTCCTTTC+TGG | - | chr1_3:5861911-5861930 | None:intergenic | 40.0% | |
CAACATCACTGTGATTGTTG+TGG | + | chr1_3:5861926-5861945 | Msa0099660:CDS | 40.0% | |
AATCCAATGCACTACAGTGA+AGG | - | chr1_3:5862134-5862153 | None:intergenic | 40.0% | |
TATTATGCCTCCGAGTACAA+AGG | + | chr1_3:5862242-5862261 | Msa0099660:three_prime_UTR | 40.0% | |
! | GTGATGTCTTGATGGGTAAG+TGG | - | chr1_3:5857043-5857062 | None:intergenic | 45.0% |
TACCCATCAAGACATCACTC+AGG | + | chr1_3:5857045-5857064 | Msa0099660:five_prime_UTR | 45.0% | |
TTTCCCAATCCATGGGTTTC+AGG | + | chr1_3:5857233-5857252 | Msa0099660:intron | 45.0% | |
ACACCTGAAACCCATGGATT+GGG | - | chr1_3:5857239-5857258 | None:intergenic | 45.0% | |
ACATTGACACCTGAAACCCA+TGG | - | chr1_3:5857245-5857264 | None:intergenic | 45.0% | |
GGAGAGTTGTGAGAAGAAGT+TGG | + | chr1_3:5857767-5857786 | Msa0099660:five_prime_UTR | 45.0% | |
TTGTCCTATAGGGTCTCCTT+AGG | + | chr1_3:5857941-5857960 | Msa0099660:five_prime_UTR | 45.0% | |
CATTCCTAAGGAGACCCTAT+AGG | - | chr1_3:5857948-5857967 | None:intergenic | 45.0% | |
CTATAGGGTCTCCTTAGGAA+TGG | + | chr1_3:5857946-5857965 | Msa0099660:five_prime_UTR | 45.0% | |
! | GTTTTGTGATACCAAAGGGG+TGG | + | chr1_3:5858043-5858062 | Msa0099660:five_prime_UTR | 45.0% |
CTAGCTAGGGATTTCAATGG+AGG | + | chr1_3:5858087-5858106 | Msa0099660:exon | 45.0% | |
TTTAAGCTGATGGCAGATGC+AGG | + | chr1_3:5858199-5858218 | Msa0099660:CDS | 45.0% | |
TTAAGCTGATGGCAGATGCA+GGG | + | chr1_3:5858200-5858219 | Msa0099660:CDS | 45.0% | |
CGAACCTACAACAGTTTCGT+TGG | - | chr1_3:5858254-5858273 | None:intergenic | 45.0% | |
!! | CACTCAACCGGTATTGGTAA+AGG | + | chr1_3:5858330-5858349 | Msa0099660:CDS | 45.0% |
!! | CAACCGGTATTGGTAAAGGA+AGG | + | chr1_3:5858334-5858353 | Msa0099660:CDS | 45.0% |
GGAAGGAGAAAGTCCTTTGA+TGG | + | chr1_3:5858351-5858370 | Msa0099660:CDS | 45.0% | |
ATTTGACTCCCCCAAATCAG+CGG | - | chr1_3:5858629-5858648 | None:intergenic | 45.0% | |
TATGAATGAACCCCTTGCTG+TGG | + | chr1_3:5858663-5858682 | Msa0099660:CDS | 45.0% | |
AAGATTCACTGCCACAGCAA+GGG | - | chr1_3:5858677-5858696 | None:intergenic | 45.0% | |
GTGAATCTTGACCCAGAGAT+TGG | + | chr1_3:5858688-5858707 | Msa0099660:CDS | 45.0% | |
GAGCAACTGTAGAAGGCTTT+AGG | - | chr1_3:5858726-5858745 | None:intergenic | 45.0% | |
AGCTGATGAGCAACTGTAGA+AGG | - | chr1_3:5858733-5858752 | None:intergenic | 45.0% | |
GAACGAGTGTAACAGTTGTC+CGG | + | chr1_3:5858767-5858786 | Msa0099660:CDS | 45.0% | |
ATGTGGACGAAGACCAGAAA+TGG | + | chr1_3:5858837-5858856 | Msa0099660:CDS | 45.0% | |
! | ATTGGTGATCGAGTACCTGA+TGG | + | chr1_3:5858913-5858932 | Msa0099660:CDS | 45.0% |
TCATTTGCGGCCTAAAACAC+CGG | - | chr1_3:5858945-5858964 | None:intergenic | 45.0% | |
CCGCAAATGACCCATTTCTT+TGG | + | chr1_3:5858955-5858974 | Msa0099660:CDS | 45.0% | |
! | TTTGGAGTCTATGATGGCCA+TGG | + | chr1_3:5858973-5858992 | Msa0099660:CDS | 45.0% |
! | CATCCATATTGCATTGACCG+AGG | + | chr1_3:5859111-5859130 | Msa0099660:CDS | 45.0% |
ATCGATGGAGGTCTCAAAGA+TGG | + | chr1_3:5859160-5859179 | Msa0099660:CDS | 45.0% | |
AAGATGGTTGCCAAGATCAG+TGG | + | chr1_3:5859176-5859195 | Msa0099660:CDS | 45.0% | |
!! | AAGGTTGATGCAGAAGTTGG+AGG | + | chr1_3:5859226-5859245 | Msa0099660:CDS | 45.0% |
TTGTCGTGGCAAAGAACCAA+TGG | + | chr1_3:5859363-5859382 | Msa0099660:CDS | 45.0% | |
AGAACCAATGGCGTTATCAG+TGG | + | chr1_3:5859375-5859394 | Msa0099660:CDS | 45.0% | |
!! | CCACTGTATCACTTTTCCTC+CGG | - | chr1_3:5859531-5859550 | None:intergenic | 45.0% |
TGGAATGGCCATCGTGTATT+TGG | + | chr1_3:5859548-5859567 | Msa0099660:CDS | 45.0% | |
!!! | GTTGGTTTGGTTCGGTTTTG+AGG | + | chr1_3:5860014-5860033 | Msa0099660:intron | 45.0% |
! | ACATAAAGTGATTTGCGGGG+TGG | - | chr1_3:5860778-5860797 | None:intergenic | 45.0% |
CCGAGAAGAATGCCTACAAA+GGG | - | chr1_3:5860931-5860950 | None:intergenic | 45.0% | |
CCCTTTGTAGGCATTCTTCT+CGG | + | chr1_3:5860928-5860947 | Msa0099660:intron | 45.0% | |
ACCGAGAAGAATGCCTACAA+AGG | - | chr1_3:5860932-5860951 | None:intergenic | 45.0% | |
TGCGGGACAACATTGAGATT+TGG | + | chr1_3:5861397-5861416 | Msa0099660:intron | 45.0% | |
GCGGGACAACATTGAGATTT+GGG | + | chr1_3:5861398-5861417 | Msa0099660:intron | 45.0% | |
ATTCATTCCTCGTGCGAAAG+AGG | + | chr1_3:5861698-5861717 | Msa0099660:CDS | 45.0% | |
GGATGTGATGACAAACGAAG+AGG | + | chr1_3:5861755-5861774 | Msa0099660:CDS | 45.0% | |
! | AAACGAAGAGGTGTGTGATC+TGG | + | chr1_3:5861767-5861786 | Msa0099660:CDS | 45.0% |
TCTCCTTCACTGTAGTGCAT+TGG | + | chr1_3:5862128-5862147 | Msa0099660:three_prime_UTR | 45.0% | |
!!! | TCTATTTTATTTTATTTATA+AGG | + | chr1_3:5857183-5857202 | Msa0099660:intron | 5.0% |
!!! | ATTTTTATACTATTAAAATA+AGG | + | chr1_3:5860182-5860201 | Msa0099660:intron | 5.0% |
GACACCTGAAACCCATGGAT+TGG | - | chr1_3:5857240-5857259 | None:intergenic | 50.0% | |
TTTGTCAACGGTGTAGGGTC+TGG | - | chr1_3:5857317-5857336 | None:intergenic | 50.0% | |
TGATGTGTTGCCTCAGATCC+AGG | + | chr1_3:5857459-5857478 | Msa0099660:intron | 50.0% | |
CATAGAGTTGCCTGGATCTG+AGG | - | chr1_3:5857472-5857491 | None:intergenic | 50.0% | |
AAGTTAACCTCCCACCCCTT+TGG | - | chr1_3:5858057-5858076 | None:intergenic | 50.0% | |
! | ACGATTAGCCCCAGAAAGTG+AGG | + | chr1_3:5858417-5858436 | Msa0099660:CDS | 50.0% |
! | TGTTGCTCACACCGCTGATT+TGG | + | chr1_3:5858615-5858634 | Msa0099660:CDS | 50.0% |
!! | GTTGCTCACACCGCTGATTT+GGG | + | chr1_3:5858616-5858635 | Msa0099660:CDS | 50.0% |
!! | TTGCTCACACCGCTGATTTG+GGG | + | chr1_3:5858617-5858636 | Msa0099660:CDS | 50.0% |
AGATTCACTGCCACAGCAAG+GGG | - | chr1_3:5858676-5858695 | None:intergenic | 50.0% | |
CAAGATTCACTGCCACAGCA+AGG | - | chr1_3:5858678-5858697 | None:intergenic | 50.0% | |
GCAACTGCGTCTTCCATTTC+TGG | - | chr1_3:5858853-5858872 | None:intergenic | 50.0% | |
ACGCAGTTGCAACTGTTCCT+CGG | + | chr1_3:5858863-5858882 | Msa0099660:CDS | 50.0% | |
AGTTTACCTGAGAGCCACCA+TGG | - | chr1_3:5858993-5859012 | None:intergenic | 50.0% | |
GTTGTTGCGCCAGAAACTGT+TGG | + | chr1_3:5859265-5859284 | Msa0099660:CDS | 50.0% | |
! | TGGTCCACTGATAACGCCAT+TGG | - | chr1_3:5859382-5859401 | None:intergenic | 50.0% |
CCGGAGGAAAAGTGATACAG+TGG | + | chr1_3:5859528-5859547 | Msa0099660:CDS | 50.0% | |
AGACACGCCTAATCTCCTAG+AGG | + | chr1_3:5860372-5860391 | Msa0099660:intron | 50.0% | |
ATTCCTCGGAGTCAGTCCAA+AGG | + | chr1_3:5861131-5861150 | Msa0099660:intron | 50.0% | |
AGTCAGTCCAAAGGCTGCTA+AGG | + | chr1_3:5861140-5861159 | Msa0099660:intron | 50.0% | |
GTCAGTCCAAAGGCTGCTAA+GGG | + | chr1_3:5861141-5861160 | Msa0099660:intron | 50.0% | |
! | GTATGAAAAGAGGGGGCACA+AGG | - | chr1_3:5861185-5861204 | None:intergenic | 50.0% |
GTCCCGCAATTACGAGTAGA+AGG | - | chr1_3:5861385-5861404 | None:intergenic | 50.0% | |
CATTCATCCTCTTTCGCACG+AGG | - | chr1_3:5861708-5861727 | None:intergenic | 50.0% | |
AAACGGCATGGAACTACCCT+CGG | + | chr1_3:5861821-5861840 | Msa0099660:CDS | 50.0% | |
CATGGAACTACCCTCGGAAA+GGG | + | chr1_3:5861827-5861846 | Msa0099660:CDS | 50.0% | |
ATGGAACTACCCTCGGAAAG+GGG | + | chr1_3:5861828-5861847 | Msa0099660:CDS | 50.0% | |
AGTACAGAGGATGAATGCCC+TGG | - | chr1_3:5862072-5862091 | None:intergenic | 50.0% | |
CCTCACAGAGCCTTTGTACT+CGG | - | chr1_3:5862255-5862274 | None:intergenic | 50.0% | |
TCAACGGTGTAGGGTCTGGT+TGG | - | chr1_3:5857313-5857332 | None:intergenic | 55.0% | |
TGTGATACCAAAGGGGTGGG+AGG | + | chr1_3:5858047-5858066 | Msa0099660:five_prime_UTR | 55.0% | |
!! | TGCTCACACCGCTGATTTGG+GGG | + | chr1_3:5858618-5858637 | Msa0099660:CDS | 55.0% |
AGTTGCTCATCAGCTGCCTC+AGG | + | chr1_3:5858738-5858757 | Msa0099660:CDS | 55.0% | |
TCATCAGCTGCCTCAGGAAG+AGG | + | chr1_3:5858744-5858763 | Msa0099660:CDS | 55.0% | |
CATCAGCTGCCTCAGGAAGA+GGG | + | chr1_3:5858745-5858764 | Msa0099660:CDS | 55.0% | |
ACACTCGTTCCCTCTTCCTG+AGG | - | chr1_3:5858757-5858776 | None:intergenic | 55.0% | |
GGAGTCTATGATGGCCATGG+TGG | + | chr1_3:5858976-5858995 | Msa0099660:CDS | 55.0% | |
GCAGTGGAGCCAACAGTTTC+TGG | - | chr1_3:5859277-5859296 | None:intergenic | 55.0% | |
TCGAGAGCCGTTCTTTGTCG+TGG | + | chr1_3:5859349-5859368 | Msa0099660:CDS | 55.0% | |
GCAAGAATTGAAGCAGCCGG+AGG | + | chr1_3:5859512-5859531 | Msa0099660:CDS | 55.0% | |
GACATGTGTCCTACGGGTGT+CGG | + | chr1_3:5860325-5860344 | Msa0099660:intron | 55.0% | |
GTCGGACACCAAACGTGTGT+CGG | + | chr1_3:5860343-5860362 | Msa0099660:intron | 55.0% | |
CTCTGTGTCCGACACACGTT+TGG | - | chr1_3:5860354-5860373 | None:intergenic | 55.0% | |
GCATGGAACTACCCTCGGAA+AGG | + | chr1_3:5861826-5861845 | Msa0099660:CDS | 55.0% | |
TCGAATCGCGCTCTCCAGAA+AGG | + | chr1_3:5861894-5861913 | Msa0099660:CDS | 55.0% | |
CACAGAGCCTTTGTACTCGG+AGG | - | chr1_3:5862252-5862271 | None:intergenic | 55.0% | |
CCGAGTACAAAGGCTCTGTG+AGG | + | chr1_3:5862252-5862271 | Msa0099660:three_prime_UTR | 55.0% | |
TGATGGCCATGGTGGCTCTC+AGG | + | chr1_3:5858984-5859003 | Msa0099660:CDS | 60.0% | |
CAGGGTCAACGTGTCCGTGT+TGG | - | chr1_3:5859660-5859679 | None:intergenic | 60.0% | |
!! | GTTTGGTGTCCGACACCCGT+AGG | - | chr1_3:5860337-5860356 | None:intergenic | 60.0% |
! | CAGCCTTTGGACTGACTCCG+AGG | - | chr1_3:5861137-5861156 | None:intergenic | 60.0% |
ACTACCCTCGGAAAGGGGAG+AGG | + | chr1_3:5861833-5861852 | Msa0099660:CDS | 60.0% | |
CTACCCTCGGAAAGGGGAGA+GGG | + | chr1_3:5861834-5861853 | Msa0099660:CDS | 60.0% | |
CTACCCTCTCCCCTTTCCGA+GGG | - | chr1_3:5861840-5861859 | None:intergenic | 60.0% | |
ACTACCCTCTCCCCTTTCCG+AGG | - | chr1_3:5861841-5861860 | None:intergenic | 60.0% | |
! | TCTGCTGCTGCTTGTGCTGC+AGG | - | chr1_3:5861867-5861886 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_3 | gene | 5857014 | 5862426 | 5857014 | ID=Msa0099660;Name=Msa0099660 |
chr1_3 | mRNA | 5857014 | 5862426 | 5857014 | ID=Msa0099660-mRNA-1;Parent=Msa0099660;Name=Msa0099660-mRNA-1;_AED=0.07;_eAED=0.07;_QI=526|1|1|1|0.6|0.5|6|440|553 |
chr1_3 | exon | 5857014 | 5857068 | 5857014 | ID=Msa0099660-mRNA-1:exon:2232;Parent=Msa0099660-mRNA-1 |
chr1_3 | exon | 5857255 | 5857345 | 5857255 | ID=Msa0099660-mRNA-1:exon:2233;Parent=Msa0099660-mRNA-1 |
chr1_3 | exon | 5857723 | 5859005 | 5857723 | ID=Msa0099660-mRNA-1:exon:2234;Parent=Msa0099660-mRNA-1 |
chr1_3 | exon | 5859088 | 5859405 | 5859088 | ID=Msa0099660-mRNA-1:exon:2235;Parent=Msa0099660-mRNA-1 |
chr1_3 | exon | 5859491 | 5859596 | 5859491 | ID=Msa0099660-mRNA-1:exon:2236;Parent=Msa0099660-mRNA-1 |
chr1_3 | exon | 5861652 | 5862426 | 5861652 | ID=Msa0099660-mRNA-1:exon:2237;Parent=Msa0099660-mRNA-1 |
chr1_3 | five_prime_UTR | 5857014 | 5857068 | 5857014 | ID=Msa0099660-mRNA-1:five_prime_utr;Parent=Msa0099660-mRNA-1 |
chr1_3 | five_prime_UTR | 5857255 | 5857345 | 5857255 | ID=Msa0099660-mRNA-1:five_prime_utr;Parent=Msa0099660-mRNA-1 |
chr1_3 | five_prime_UTR | 5857723 | 5858102 | 5857723 | ID=Msa0099660-mRNA-1:five_prime_utr;Parent=Msa0099660-mRNA-1 |
chr1_3 | CDS | 5858103 | 5859005 | 5858103 | ID=Msa0099660-mRNA-1:cds;Parent=Msa0099660-mRNA-1 |
chr1_3 | CDS | 5859088 | 5859405 | 5859088 | ID=Msa0099660-mRNA-1:cds;Parent=Msa0099660-mRNA-1 |
chr1_3 | CDS | 5859491 | 5859596 | 5859491 | ID=Msa0099660-mRNA-1:cds;Parent=Msa0099660-mRNA-1 |
chr1_3 | CDS | 5861652 | 5861986 | 5861652 | ID=Msa0099660-mRNA-1:cds;Parent=Msa0099660-mRNA-1 |
chr1_3 | three_prime_UTR | 5861987 | 5862426 | 5861987 | ID=Msa0099660-mRNA-1:three_prime_utr;Parent=Msa0099660-mRNA-1 |
Gene Sequence |
Protein sequence |