Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1404500 | XP_013470155.1 | 99.063 | 854 | 8 | 0 | 1 | 854 | 1 | 854 | 0.0 | 1764 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1404500 | sp|O23617|TPS5_ARATH | 77.374 | 853 | 189 | 3 | 1 | 850 | 1 | 852 | 0.0 | 1409 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1404500 | A0A072VRW8 | 99.063 | 854 | 8 | 0 | 1 | 854 | 1 | 854 | 0.0 | 1764 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0031220 | Msa1404500 | 0.850617 | 1.512311e-60 | -8.615850e-47 |
| Msa0043280 | Msa1404500 | 0.879697 | 1.008677e-69 | -8.615850e-47 |
| Msa0053830 | Msa1404500 | 0.809910 | 1.497890e-50 | -8.615850e-47 |
| Msa0078510 | Msa1404500 | 0.847897 | 8.647746e-60 | -8.615850e-47 |
| Msa0099660 | Msa1404500 | 0.813954 | 1.970564e-51 | -8.615850e-47 |
| Msa0099670 | Msa1404500 | 0.824174 | 9.313854e-54 | -8.615850e-47 |
| Msa0660330 | Msa1404500 | 0.821360 | 4.208687e-53 | -8.615850e-47 |
| Msa0126290 | Msa1404500 | 0.855409 | 6.431312e-62 | -8.615850e-47 |
| Msa0137200 | Msa1404500 | 0.959168 | 3.805324e-117 | -8.615850e-47 |
| Msa0171170 | Msa1404500 | 0.857489 | 1.576833e-62 | -8.615850e-47 |
| Msa0182380 | Msa1404500 | 0.995024 | 2.573340e-212 | -8.615850e-47 |
| Msa0275690 | Msa1404500 | 0.811690 | 6.171320e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1404500 | MtrunA17_Chr1g0209251 | 99.063 | 854 | 8 | 0 | 1 | 854 | 1 | 854 | 0.0 | 1764 |
| Msa1404500 | MtrunA17_Chr8g0391971 | 72.706 | 850 | 224 | 5 | 1 | 843 | 1 | 849 | 0.0 | 1313 |
| Msa1404500 | MtrunA17_Chr1g0161531 | 72.535 | 852 | 224 | 6 | 1 | 843 | 1 | 851 | 0.0 | 1300 |
| Msa1404500 | MtrunA17_Chr4g0041381 | 64.947 | 853 | 288 | 3 | 1 | 844 | 1 | 851 | 0.0 | 1203 |
| Msa1404500 | MtrunA17_Chr8g0364961 | 66.982 | 845 | 271 | 2 | 1 | 843 | 1 | 839 | 0.0 | 1182 |
| Msa1404500 | MtrunA17_Chr4g0073041 | 60.050 | 801 | 310 | 7 | 52 | 846 | 47 | 843 | 0.0 | 1002 |
| Msa1404500 | MtrunA17_Chr3g0117891 | 53.766 | 770 | 353 | 2 | 83 | 850 | 3 | 771 | 0.0 | 844 |
| Msa1404500 | MtrunA17_Chr3g0107401 | 49.082 | 599 | 275 | 3 | 61 | 659 | 1 | 569 | 0.0 | 576 |
| Msa1404500 | MtrunA17_Chr2g0314621 | 35.857 | 753 | 424 | 19 | 58 | 792 | 122 | 833 | 8.08e-144 | 449 |
| Msa1404500 | MtrunA17_Chr8g0359371 | 35.714 | 756 | 423 | 21 | 58 | 792 | 83 | 796 | 1.03e-139 | 437 |
| Msa1404500 | MtrunA17_Chr8g0380051 | 39.244 | 344 | 184 | 10 | 58 | 398 | 75 | 396 | 9.36e-71 | 240 |
| Msa1404500 | MtrunA17_Chr8g0380061 | 32.877 | 438 | 244 | 14 | 387 | 806 | 5 | 410 | 4.52e-57 | 204 |
| Msa1404500 | MtrunA17_Chr3g0107421 | 48.485 | 165 | 85 | 0 | 252 | 416 | 1 | 165 | 2.14e-48 | 169 |
| Msa1404500 | MtrunA17_Chr3g0116901 | 53.383 | 133 | 61 | 1 | 60 | 192 | 39 | 170 | 7.79e-46 | 162 |
| Msa1404500 | MtrunA17_Chr3g0107411 | 51.701 | 147 | 71 | 0 | 443 | 589 | 1 | 147 | 1.87e-45 | 160 |
| Msa1404500 | MtrunA17_Chr3g0107431 | 42.241 | 116 | 52 | 2 | 58 | 173 | 9 | 109 | 1.09e-24 | 99.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1404500 | AT4G17770.1 | 77.374 | 853 | 189 | 3 | 1 | 850 | 1 | 852 | 0.0 | 1409 |
| Msa1404500 | AT4G17770.2 | 77.374 | 853 | 189 | 3 | 1 | 850 | 1 | 852 | 0.0 | 1409 |
| Msa1404500 | AT1G68020.2 | 71.346 | 862 | 222 | 7 | 1 | 843 | 1 | 856 | 0.0 | 1300 |
| Msa1404500 | AT1G68020.3 | 71.346 | 862 | 222 | 7 | 1 | 843 | 1 | 856 | 0.0 | 1300 |
| Msa1404500 | AT1G06410.3 | 67.217 | 848 | 266 | 4 | 1 | 844 | 1 | 840 | 0.0 | 1179 |
| Msa1404500 | AT1G06410.1 | 67.217 | 848 | 266 | 4 | 1 | 844 | 1 | 840 | 0.0 | 1179 |
| Msa1404500 | AT1G06410.2 | 67.217 | 848 | 266 | 4 | 1 | 844 | 1 | 840 | 0.0 | 1179 |
| Msa1404500 | AT1G23870.1 | 63.860 | 855 | 307 | 1 | 1 | 853 | 1 | 855 | 0.0 | 1158 |
| Msa1404500 | AT1G70290.1 | 62.307 | 841 | 310 | 3 | 1 | 839 | 1 | 836 | 0.0 | 1117 |
| Msa1404500 | AT1G60140.6 | 61.091 | 843 | 326 | 1 | 1 | 841 | 1 | 843 | 0.0 | 1108 |
| Msa1404500 | AT1G60140.1 | 61.091 | 843 | 326 | 1 | 1 | 841 | 1 | 843 | 0.0 | 1108 |
| Msa1404500 | AT1G60140.2 | 61.091 | 843 | 326 | 1 | 1 | 841 | 1 | 843 | 0.0 | 1108 |
| Msa1404500 | AT1G60140.5 | 61.091 | 843 | 326 | 1 | 1 | 841 | 1 | 843 | 0.0 | 1108 |
| Msa1404500 | AT1G60140.4 | 61.091 | 843 | 326 | 1 | 1 | 841 | 1 | 843 | 0.0 | 1108 |
| Msa1404500 | AT1G68020.1 | 71.994 | 682 | 168 | 6 | 1 | 665 | 1 | 676 | 0.0 | 1043 |
| Msa1404500 | AT2G18700.1 | 58.392 | 846 | 338 | 7 | 1 | 842 | 1 | 836 | 0.0 | 1043 |
| Msa1404500 | AT1G70290.2 | 58.502 | 841 | 304 | 4 | 1 | 839 | 1 | 798 | 0.0 | 1027 |
| Msa1404500 | AT1G60140.3 | 61.804 | 754 | 288 | 0 | 1 | 754 | 1 | 754 | 0.0 | 1006 |
| Msa1404500 | AT1G16980.1 | 34.761 | 817 | 462 | 26 | 60 | 850 | 13 | 784 | 1.05e-145 | 450 |
| Msa1404500 | AT1G78580.4 | 34.875 | 757 | 431 | 19 | 57 | 792 | 90 | 805 | 3.66e-141 | 442 |
| Msa1404500 | AT1G78580.1 | 34.875 | 757 | 431 | 19 | 57 | 792 | 90 | 805 | 3.66e-141 | 442 |
| Msa1404500 | AT1G78580.2 | 34.875 | 757 | 431 | 19 | 57 | 792 | 90 | 805 | 3.66e-141 | 442 |
| Msa1404500 | AT1G78580.3 | 34.875 | 757 | 431 | 19 | 57 | 792 | 90 | 805 | 3.66e-141 | 442 |
| Msa1404500 | AT4G27550.2 | 33.976 | 830 | 450 | 27 | 56 | 837 | 1 | 780 | 4.77e-137 | 427 |
| Msa1404500 | AT4G27550.1 | 34.135 | 832 | 455 | 28 | 56 | 837 | 1 | 789 | 1.25e-136 | 426 |
| Msa1404500 | AT1G16980.2 | 35.220 | 636 | 353 | 20 | 60 | 681 | 13 | 603 | 6.68e-118 | 373 |
Find 211 sgRNAs with CRISPR-Local
Find 283 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAATGCAAGAATACCCTTTC+TGG | 0.172862 | tig0023067:+53688 | None:intergenic |
| ACAGATAGCTTTCTAAAGTT+TGG | 0.197254 | tig0023067:-56131 | None:intergenic |
| CTTCTGAATTCTGACCTTAT+AGG | 0.215099 | tig0023067:+55171 | Msa1404500:CDS |
| AGATGCTGGGGAATTGGTTT+TGG | 0.230491 | tig0023067:+56080 | Msa1404500:CDS |
| CCACCAGCATGCTCTTCTTT+TGG | 0.238177 | tig0023067:-55827 | None:intergenic |
| AGGAATCAGCTTAAAACTTT+TGG | 0.239280 | tig0023067:+55458 | Msa1404500:CDS |
| TTCTGAATTCTGACCTTATA+GGG | 0.267422 | tig0023067:+55172 | Msa1404500:CDS |
| CAAAAGAATTAGAATGAAAA+TGG | 0.273130 | tig0023067:-57922 | None:intergenic |
| TGTGTCTTCCAAGTAATATT+TGG | 0.281526 | tig0023067:-57577 | None:intergenic |
| CTTCCTGTTGGTATTCATAT+AGG | 0.288144 | tig0023067:+55321 | Msa1404500:CDS |
| CATCATTAAGCGGCGCGATT+CGG | 0.290810 | tig0023067:+55874 | Msa1404500:CDS |
| CAAGCACCGAGCGATTCTTT+TGG | 0.298713 | tig0023067:+56184 | Msa1404500:CDS |
| CCAAGAGTGGCAACTGTTGC+TGG | 0.299481 | tig0023067:+54499 | Msa1404500:CDS |
| CACAATGAAAACACAATTCT+TGG | 0.302805 | tig0023067:-56297 | None:intergenic |
| GAATTTGCAGACCGAGATTT+CGG | 0.306462 | tig0023067:+56709 | Msa1404500:CDS |
| CAGATAGCTTTCTAAAGTTT+GGG | 0.314076 | tig0023067:-56130 | None:intergenic |
| TCCTTTCCGCGGCCTCTAGC+AGG | 0.317442 | tig0023067:-55549 | None:intergenic |
| TAACGGAGAAGAAGAATCTT+TGG | 0.323144 | tig0023067:+53810 | Msa1404500:five_prime_UTR |
| TTGCTTAATGAGGAGATAAC+TGG | 0.325875 | tig0023067:-57668 | None:intergenic |
| CTTGGTTGGTTATCTTGTAT+TGG | 0.332117 | tig0023067:+57756 | Msa1404500:three_prime_UTR |
| TACGCACGATGTTGCATATT+GGG | 0.340179 | tig0023067:+56004 | Msa1404500:CDS |
| CCAAACCAGAGCACTCTCTT+TGG | 0.342936 | tig0023067:-56680 | None:intergenic |
| TCTTTCCTTTGTGCCTTCAA+TGG | 0.344898 | tig0023067:-54622 | None:intergenic |
| TTTGGATTATGATAGTACTA+TGG | 0.345249 | tig0023067:+56202 | Msa1404500:CDS |
| AGCTATGGATTCCGCCTTAA+TGG | 0.346795 | tig0023067:+55929 | Msa1404500:CDS |
| GGTTTAACTTCCACAATGTA+TGG | 0.356426 | tig0023067:-56808 | None:intergenic |
| GCAACATCATCTTGCTCAAT+TGG | 0.362213 | tig0023067:-54763 | None:intergenic |
| TCTGTATATAACTGCATAAC+TGG | 0.363196 | tig0023067:-56631 | None:intergenic |
| AGGAGGAGATGCTGGGGAAT+TGG | 0.363586 | tig0023067:+56074 | Msa1404500:CDS |
| AAGCTTCCCATTCTTCAGTA+TGG | 0.363738 | tig0023067:-56567 | None:intergenic |
| AGATCAGATGAGGACATGTT+TGG | 0.364020 | tig0023067:+57474 | Msa1404500:CDS |
| TTCAGACTCCGGGACCATTA+AGG | 0.365240 | tig0023067:-55943 | None:intergenic |
| CTTCCGCTGTCGCCTGATCT+TGG | 0.368992 | tig0023067:+54901 | Msa1404500:CDS |
| CTAAGAAGTTCATCTCTAAC+AGG | 0.372241 | tig0023067:-55144 | None:intergenic |
| CCAATGCATAGAACAAAATC+TGG | 0.378049 | tig0023067:-57444 | None:intergenic |
| GTTGTATCGATCAAGATTAC+AGG | 0.378659 | tig0023067:-55648 | None:intergenic |
| GGTTCATGACTACCACTTGA+TGG | 0.384948 | tig0023067:+55026 | Msa1404500:CDS |
| ATCATCTGAGGAGGAGATGC+TGG | 0.385858 | tig0023067:+56066 | Msa1404500:CDS |
| GTCGATTTGATCGATCTCTT+TGG | 0.389308 | tig0023067:+54926 | Msa1404500:CDS |
| TTTGTTGCAGGGTGTGAGTA+AGG | 0.391370 | tig0023067:+57371 | Msa1404500:intron |
| CTTTCGGTCGTGAGAAGAAA+AGG | 0.392381 | tig0023067:+54473 | Msa1404500:CDS |
| GTGTGTTGTGTTATTATTAA+CGG | 0.393755 | tig0023067:+53793 | Msa1404500:five_prime_UTR |
| ATCTGTTTCCAGTCAAAATC+AGG | 0.395840 | tig0023067:-56601 | None:intergenic |
| GTTTCTGTAAGCAACATCTA+TGG | 0.403151 | tig0023067:+54860 | Msa1404500:CDS |
| GCACAAAGGAAAGAGGAAAA+TGG | 0.406553 | tig0023067:+54631 | Msa1404500:CDS |
| ACATTGTTTCAGCTTATAAG+AGG | 0.408474 | tig0023067:+56159 | Msa1404500:CDS |
| GATCATCCTCTCTTGAGAAA+TGG | 0.409237 | tig0023067:-54581 | None:intergenic |
| AAAAGGATAAACGACACATT+TGG | 0.409911 | tig0023067:+55609 | Msa1404500:CDS |
| ATCATTAAGCGGCGCGATTC+GGG | 0.410018 | tig0023067:+55875 | Msa1404500:CDS |
| TAAGGAACTTCTTGATCATC+TGG | 0.414096 | tig0023067:+56744 | Msa1404500:CDS |
| TGCGTCATGAGAAGCATTAT+AGG | 0.414289 | tig0023067:+55973 | Msa1404500:CDS |
| GATCAGATGAGGACATGTTT+GGG | 0.414515 | tig0023067:+57475 | Msa1404500:CDS |
| CGAAAGTATGAAACCCTATA+AGG | 0.416886 | tig0023067:-55185 | None:intergenic |
| GTACGCACGATGTTGCATAT+TGG | 0.417861 | tig0023067:+56003 | Msa1404500:CDS |
| CCAGCAACAGTTGCCACTCT+TGG | 0.421922 | tig0023067:-54499 | None:intergenic |
| TCCCAACATTCTACTGCAAC+AGG | 0.422981 | tig0023067:-55229 | None:intergenic |
| TCTGATAACAATGCAACAAA+AGG | 0.423959 | tig0023067:+57413 | Msa1404500:CDS |
| TCCTGTTGCAGTAGAATGTT+GGG | 0.425459 | tig0023067:+55228 | Msa1404500:CDS |
| AATGAGGGGAAAGGTTGTTC+TGG | 0.426046 | tig0023067:+55512 | Msa1404500:CDS |
| CCAAAGAGAGTGCTCTGGTT+TGG | 0.428765 | tig0023067:+56680 | Msa1404500:CDS |
| TCATGCGGCTCGCCGTCTTT+CGG | 0.430507 | tig0023067:+54457 | Msa1404500:CDS |
| AAGTAATATTTGGCTTTGCT+TGG | 0.430940 | tig0023067:-57567 | None:intergenic |
| CGGACGAAGGAAAAGGACTA+TGG | 0.431241 | tig0023067:-55104 | None:intergenic |
| GATGTTGAAACAATCTATAT+TGG | 0.433844 | tig0023067:+54718 | Msa1404500:CDS |
| GCGTAGCTTCTTGCAGGATC+TGG | 0.434843 | tig0023067:+56028 | Msa1404500:CDS |
| AGGATTTCGAGTAATAGCTT+TGG | 0.436633 | tig0023067:+56106 | Msa1404500:CDS |
| ACCCAAACAAAATCCTCATC+AGG | 0.437641 | tig0023067:-55006 | None:intergenic |
| CGAATCGCGCCGCTTAATGA+TGG | 0.438856 | tig0023067:-55873 | None:intergenic |
| TTGGGCGCGTAGCTTCTTGC+AGG | 0.441346 | tig0023067:+56022 | Msa1404500:CDS |
| TCAAATCGACCACCAAGATC+AGG | 0.444062 | tig0023067:-54913 | None:intergenic |
| AAGGTCAAACTGTGATGCTT+GGG | 0.444131 | tig0023067:+55412 | Msa1404500:CDS |
| CAAAAGAATCGCTCGGTGCT+TGG | 0.449492 | tig0023067:-56183 | None:intergenic |
| TCACAGTTTGACCTTTGAAC+TGG | 0.450018 | tig0023067:-55404 | None:intergenic |
| AACGACACATTTGGAAGGCC+TGG | 0.452363 | tig0023067:+55618 | Msa1404500:CDS |
| AACTAACATTCATTCATTCA+AGG | 0.456387 | tig0023067:+53850 | Msa1404500:five_prime_UTR |
| GGAAAGAGGAAAATGGTAAG+TGG | 0.457394 | tig0023067:+54638 | Msa1404500:CDS |
| TTTGTCTATAAAACCAGAAA+GGG | 0.457718 | tig0023067:-53701 | None:intergenic |
| CAAGAGAGGATGATCATTGT+TGG | 0.460566 | tig0023067:+54589 | Msa1404500:CDS |
| GATTGTATCTAAGTTGTTGA+AGG | 0.461165 | tig0023067:+57827 | Msa1404500:three_prime_UTR |
| TGGTAACCAGCTTCCATTGA+AGG | 0.461364 | tig0023067:+54609 | Msa1404500:CDS |
| GAAACATATACTAATGCTAT+TGG | 0.462818 | tig0023067:+57710 | Msa1404500:three_prime_UTR |
| TTACAGCTGAAAGATGGTCT+TGG | 0.463158 | tig0023067:+54691 | Msa1404500:CDS |
| AAGACCTATGTAGCCTCGCT+TGG | 0.466700 | tig0023067:-55265 | None:intergenic |
| AGCAGTTTGTTCAGAAGCAT+TGG | 0.467175 | tig0023067:-57631 | None:intergenic |
| AGATTTAACAGGGCAAGGCT+TGG | 0.467489 | tig0023067:+55072 | Msa1404500:CDS |
| GACAAGCCATACTGAAGAAT+GGG | 0.468184 | tig0023067:+56561 | Msa1404500:CDS |
| CAAGGAAACACGTCCGCAAT+GGG | 0.469994 | tig0023067:-57528 | None:intergenic |
| CTACAAATGATATACTCATA+TGG | 0.471654 | tig0023067:-55756 | None:intergenic |
| CTGGTGGTGTCTGAATTCAT+TGG | 0.473518 | tig0023067:+55843 | Msa1404500:CDS |
| ATTTGATCGATCTCTTTGGC+AGG | 0.477042 | tig0023067:+54930 | Msa1404500:CDS |
| AAAGGTCAAACTGTGATGCT+TGG | 0.478423 | tig0023067:+55411 | Msa1404500:CDS |
| AAACTTATGCAACCGTGAAA+AGG | 0.479354 | tig0023067:+55592 | Msa1404500:CDS |
| CAATCCAAGCGAGGCTACAT+AGG | 0.479480 | tig0023067:+55261 | Msa1404500:CDS |
| TTTGTGCCTTCAATGGAAGC+TGG | 0.479814 | tig0023067:-54615 | None:intergenic |
| TTGTAGTATTTGTGAATACT+TGG | 0.480347 | tig0023067:+57738 | Msa1404500:three_prime_UTR |
| TCGGTAGTAGCAACAATGTT+GGG | 0.481685 | tig0023067:-57806 | None:intergenic |
| TACATAGGTCTTGAGTACTA+TGG | 0.482799 | tig0023067:+55276 | Msa1404500:CDS |
| CTCCTGTTGCAGTAGAATGT+TGG | 0.483716 | tig0023067:+55227 | Msa1404500:CDS |
| TTAGAAAAGCTTGCTTAATG+AGG | 0.484009 | tig0023067:-57678 | None:intergenic |
| TATATCTCGGACGAAGGAAA+AGG | 0.486903 | tig0023067:-55111 | None:intergenic |
| GAATCGCGCCGCTTAATGAT+GGG | 0.487141 | tig0023067:-55872 | None:intergenic |
| CGATACAACACTCCAGAGTT+GGG | 0.487205 | tig0023067:+55662 | Msa1404500:CDS |
| GAGTGAGCAAAATGGCTTCA+AGG | 0.488129 | tig0023067:+54407 | Msa1404500:exon |
| AAGCGATTCTCTCCCAACTC+TGG | 0.499258 | tig0023067:-55674 | None:intergenic |
| TGATGCTGTTGCTGAAGCTA+TGG | 0.500313 | tig0023067:+55914 | Msa1404500:CDS |
| TTCAACAACTTAGATACAAT+CGG | 0.501980 | tig0023067:-57825 | None:intergenic |
| ATGGTAAGTGGGAATTCACT+TGG | 0.502564 | tig0023067:+54650 | Msa1404500:CDS |
| AAGCAAAGCCAAATATTACT+TGG | 0.502945 | tig0023067:+57569 | Msa1404500:CDS |
| CTTGTTACAGCAGTGAGAGA+TGG | 0.504181 | tig0023067:+55720 | Msa1404500:CDS |
| GACGTGTTTCCTTGCACCGT+TGG | 0.505796 | tig0023067:+57537 | Msa1404500:CDS |
| TGGCCTATATGAATACCAAC+AGG | 0.508722 | tig0023067:-55324 | None:intergenic |
| CATCTCTAACAGGAAGGGTT+CGG | 0.508766 | tig0023067:-55134 | None:intergenic |
| AAGATTACAGGTGTGTATCC+AGG | 0.509121 | tig0023067:-55636 | None:intergenic |
| TCGATACAACACTCCAGAGT+TGG | 0.509920 | tig0023067:+55661 | Msa1404500:CDS |
| GGACAAGCCATACTGAAGAA+TGG | 0.510330 | tig0023067:+56560 | Msa1404500:intron |
| AGCTCAGGTGGAAGGAAAGT+TGG | 0.512723 | tig0023067:-54817 | None:intergenic |
| GAAAGAGATTTAACAGGGCA+AGG | 0.513388 | tig0023067:+55067 | Msa1404500:CDS |
| CTGATAACAATGCAACAAAA+GGG | 0.514427 | tig0023067:+57414 | Msa1404500:CDS |
| GTGGGAATTCACTTGGGATG+AGG | 0.515265 | tig0023067:+54657 | Msa1404500:CDS |
| ATGGAAACAGCTTCAGCACT+AGG | 0.515512 | tig0023067:-56251 | None:intergenic |
| TTGTTGCAGGGTGTGAGTAA+GGG | 0.516408 | tig0023067:+57372 | Msa1404500:intron |
| TTCTTCTCACGACCGAAAGA+CGG | 0.519257 | tig0023067:-54469 | None:intergenic |
| GAGTGAGTGAGTGAGCAAAA+TGG | 0.520874 | tig0023067:+54399 | Msa1404500:exon |
| TTCATACTTTCGACTATGCT+AGG | 0.522500 | tig0023067:+55196 | Msa1404500:CDS |
| CTTCTTGCAGGATCTGGAAA+GGG | 0.524177 | tig0023067:+56034 | Msa1404500:CDS |
| CTTGACATGAACCGAAATCT+CGG | 0.524650 | tig0023067:-56720 | None:intergenic |
| GATAGTACTATGGTGCAGCC+TGG | 0.524793 | tig0023067:+56212 | Msa1404500:CDS |
| TCATCTGAGGAGGAGATGCT+GGG | 0.527479 | tig0023067:+56067 | Msa1404500:CDS |
| CATTGTGGAAGTTAAACCTC+AGG | 0.529575 | tig0023067:+56813 | Msa1404500:CDS |
| AGCATTAAGATTCTTCCTGT+TGG | 0.529787 | tig0023067:+55309 | Msa1404500:CDS |
| TGAAGTAAGATCTAACAAGT+TGG | 0.532544 | tig0023067:-54437 | None:intergenic |
| GAGCCTGTTTCAGTTAAAAG+TGG | 0.534096 | tig0023067:+56784 | Msa1404500:CDS |
| GCAAACCCTGCTAGAGGCCG+CGG | 0.535783 | tig0023067:+55543 | Msa1404500:CDS |
| GCAAGGAAACACGTCCGCAA+TGG | 0.535831 | tig0023067:-57529 | None:intergenic |
| ATCGGTAGTAGCAACAATGT+TGG | 0.537458 | tig0023067:-57807 | None:intergenic |
| CCTTTCCGCGGCCTCTAGCA+GGG | 0.538093 | tig0023067:-55548 | None:intergenic |
| CCGCTGTCGCCTGATCTTGG+TGG | 0.540431 | tig0023067:+54904 | Msa1404500:CDS |
| AGTATTTGTGAATACTTGGT+TGG | 0.540615 | tig0023067:+57742 | Msa1404500:three_prime_UTR |
| GGTGTTGCACTAATTGATCC+AGG | 0.542444 | tig0023067:-56230 | None:intergenic |
| TTTACAACATGCTGAAATGA+GGG | 0.544384 | tig0023067:+55497 | Msa1404500:CDS |
| GATTCATGACTGACTCAAGC+TGG | 0.544391 | tig0023067:-55344 | None:intergenic |
| GATGACATGGATATCTTCAA+AGG | 0.545640 | tig0023067:+55438 | Msa1404500:CDS |
| GGATTCCGCCTTAATGGTCC+CGG | 0.546381 | tig0023067:+55935 | Msa1404500:CDS |
| GAAAGAGGAAAATGGTAAGT+GGG | 0.548871 | tig0023067:+54639 | Msa1404500:CDS |
| TAGAATTTAGTGAAAAGCTC+AGG | 0.548984 | tig0023067:-54832 | None:intergenic |
| AGAGAAACACTCTCACTGAA+TGG | 0.549371 | tig0023067:+56330 | Msa1404500:CDS |
| TTTCGGTTCATGTCAAGCTA+AGG | 0.551647 | tig0023067:+56726 | Msa1404500:CDS |
| CTTGGACTTGCTGCAGAACA+CGG | 0.553602 | tig0023067:+56371 | Msa1404500:CDS |
| GTTTAACTTCCACAATGTAT+GGG | 0.566536 | tig0023067:-56807 | None:intergenic |
| ACTGCACAAGCTGTTCAAGA+TGG | 0.567111 | tig0023067:-56270 | None:intergenic |
| TAGTGAAAAGCTCAGGTGGA+AGG | 0.568307 | tig0023067:-54825 | None:intergenic |
| CATAATCCAAAAGAATCGCT+CGG | 0.569386 | tig0023067:-56190 | None:intergenic |
| CCCTGCTAGAGGCCGCGGAA+AGG | 0.571655 | tig0023067:+55548 | Msa1404500:CDS |
| GCTTCTTGCAGGATCTGGAA+AGG | 0.572169 | tig0023067:+56033 | Msa1404500:CDS |
| GATGAAATCAACAACAGTGT+TGG | 0.573789 | tig0023067:+54541 | Msa1404500:CDS |
| CGTCCTCCATTTCTCAAGAG+AGG | 0.575029 | tig0023067:+54575 | Msa1404500:CDS |
| ATTGAAGGCACAAAGGAAAG+AGG | 0.575033 | tig0023067:+54624 | Msa1404500:CDS |
| CTCTCTTGAGAAATGGAGGA+CGG | 0.575333 | tig0023067:-54574 | None:intergenic |
| GAAGTTCATCTCTAACAGGA+AGG | 0.577715 | tig0023067:-55140 | None:intergenic |
| TTGTTAGATCTTACTTCATG+CGG | 0.579234 | tig0023067:+54442 | Msa1404500:CDS |
| AATATTTGCTGATAAAGTGA+TGG | 0.579350 | tig0023067:+54972 | Msa1404500:CDS |
| GGCTGCTCCCCATCATTAAG+CGG | 0.581670 | tig0023067:+55864 | Msa1404500:CDS |
| TGCTTAATGAGGAGATAACT+GGG | 0.586765 | tig0023067:-57667 | None:intergenic |
| TTGTTACAGCAGTGAGAGAT+GGG | 0.586812 | tig0023067:+55721 | Msa1404500:CDS |
| GCGCGATTCGGGTGAATCCG+TGG | 0.589497 | tig0023067:+55886 | Msa1404500:CDS |
| GATGCTTGGGGTGGATGACA+TGG | 0.591172 | tig0023067:+55425 | Msa1404500:CDS |
| AGAGTCCAAAGAGAGTGCTC+TGG | 0.593330 | tig0023067:+56675 | Msa1404500:CDS |
| GAAGAAAAGGCTTCCAAGAG+TGG | 0.594619 | tig0023067:+54486 | Msa1404500:CDS |
| AGGAAGGGTTCGGTATATCT+CGG | 0.595173 | tig0023067:-55124 | None:intergenic |
| TCTTTCTGAGACAGAAAGCA+AGG | 0.595405 | tig0023067:+55365 | Msa1404500:CDS |
| CATCCTCTCTTGAGAAATGG+AGG | 0.595883 | tig0023067:-54578 | None:intergenic |
| GAGCTAAGAAACCAGTTCAA+AGG | 0.597173 | tig0023067:+55393 | Msa1404500:CDS |
| TAAAAGTGGCCCATACATTG+TGG | 0.597276 | tig0023067:+56798 | Msa1404500:CDS |
| AAGTTCATCTCTAACAGGAA+GGG | 0.599310 | tig0023067:-55139 | None:intergenic |
| TTGGGGTAATAACAAGTGCA+AGG | 0.603403 | tig0023067:+57493 | Msa1404500:CDS |
| TATCCAAAAGAAGAGCATGC+TGG | 0.604070 | tig0023067:+55824 | Msa1404500:CDS |
| CCACCAAGATCAGGCGACAG+CGG | 0.612409 | tig0023067:-54904 | None:intergenic |
| GCAACAGCATCAATATTCCA+CGG | 0.614265 | tig0023067:-55903 | None:intergenic |
| TGGTAAGTGGGAATTCACTT+GGG | 0.618013 | tig0023067:+54651 | Msa1404500:CDS |
| GTTCGGTATATCTCGGACGA+AGG | 0.622286 | tig0023067:-55117 | None:intergenic |
| ACATGCTGAAATGAGGGGAA+AGG | 0.622463 | tig0023067:+55503 | Msa1404500:CDS |
| AATTTAGTGAAAAGCTCAGG+TGG | 0.623435 | tig0023067:-54829 | None:intergenic |
| GGAAGTTATCAACCCTGATG+AGG | 0.625660 | tig0023067:+54993 | Msa1404500:CDS |
| AAACTTTAGAAAGCTATCTG+TGG | 0.628781 | tig0023067:+56133 | Msa1404500:CDS |
| AGCTTCCATTGAAGGCACAA+AGG | 0.630490 | tig0023067:+54617 | Msa1404500:CDS |
| AATCGCGCCGCTTAATGATG+GGG | 0.632508 | tig0023067:-55871 | None:intergenic |
| TGGGGTAATAACAAGTGCAA+GGG | 0.633008 | tig0023067:+57494 | Msa1404500:CDS |
| TTACAACATGCTGAAATGAG+GGG | 0.634606 | tig0023067:+55498 | Msa1404500:CDS |
| GGAAGCATGTAGTGAAACAA+AGG | 0.636066 | tig0023067:-54883 | None:intergenic |
| CTTCTTGCACATCCTTTCCG+CGG | 0.637125 | tig0023067:-55560 | None:intergenic |
| CCCAAACAAAATCCTCATCA+GGG | 0.640182 | tig0023067:-55005 | None:intergenic |
| TGGTGATGACAGATCAGATG+AGG | 0.641223 | tig0023067:+57464 | Msa1404500:CDS |
| GAGTATATCATTTGTAGACA+AGG | 0.642548 | tig0023067:+55762 | Msa1404500:CDS |
| GGCATCTCTATCGCCCATTG+CGG | 0.645098 | tig0023067:+57515 | Msa1404500:CDS |
| CATCTGAGGAGGAGATGCTG+GGG | 0.645178 | tig0023067:+56068 | Msa1404500:CDS |
| TTTGAGAAAGAGATTTAACA+GGG | 0.647753 | tig0023067:+55062 | Msa1404500:CDS |
| CAAATCGCAAACCCTGCTAG+AGG | 0.649493 | tig0023067:+55537 | Msa1404500:CDS |
| AATCGCTTACTATGCAATTG+CGG | 0.650771 | tig0023067:+55689 | Msa1404500:CDS |
| ACATTCTACTGCAACAGGAG+AGG | 0.651128 | tig0023067:-55224 | None:intergenic |
| CTTGTAGAGATCATCTGAGG+AGG | 0.654064 | tig0023067:+56057 | Msa1404500:CDS |
| GGATAAACGACACATTTGGA+AGG | 0.660498 | tig0023067:+55613 | Msa1404500:CDS |
| TTATATACAGAAACTACTGA+TGG | 0.662521 | tig0023067:+56643 | Msa1404500:CDS |
| CCAAAAGAAGAGCATGCTGG+TGG | 0.662803 | tig0023067:+55827 | Msa1404500:CDS |
| AGACTCCGGGACCATTAAGG+CGG | 0.664593 | tig0023067:-55940 | None:intergenic |
| ATCAGATGAGGACATGTTTG+GGG | 0.667558 | tig0023067:+57476 | Msa1404500:CDS |
| TCAAACTGTGATGCTTGGGG+TGG | 0.668780 | tig0023067:+55416 | Msa1404500:CDS |
| ACGAAGGAAAAGGACTATGG+AGG | 0.674332 | tig0023067:-55101 | None:intergenic |
| GGGCTTGTAGAGATCATCTG+AGG | 0.683476 | tig0023067:+56054 | Msa1404500:CDS |
| ATGTTGGAAGAACCATCAAG+TGG | 0.693809 | tig0023067:-55038 | None:intergenic |
| AGGTCAAACTGTGATGCTTG+GGG | 0.701625 | tig0023067:+55413 | Msa1404500:CDS |
| ATTGCTTATCAATCCAAGCG+AGG | 0.704535 | tig0023067:+55252 | Msa1404500:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTGTTTATTTATTTATTTC+TGG | + | tig0023067:54012-54031 | Msa1404500:intron | 10.0% |
| !! | TCTAAATATAATTTCTCATA+TGG | + | tig0023067:54146-54165 | Msa1404500:intron | 15.0% |
| !!! | AAATAAATTGTTTTCTTTGA+TGG | + | tig0023067:56490-56509 | Msa1404500:intron | 15.0% |
| !! | GATCTTTAGTTAAAATAAAA+AGG | + | tig0023067:56939-56958 | Msa1404500:intron | 15.0% |
| !! | GATAATGATTAATAATACTA+TGG | + | tig0023067:57240-57259 | Msa1404500:intron | 15.0% |
| !!! | ATTATCATTCTCTTTTTAAT+AGG | + | tig0023067:57897-57916 | Msa1404500:three_prime_UTR | 15.0% |
| !! | AATGAATAATAAACAGAAAG+AGG | - | tig0023067:53932-53951 | None:intergenic | 20.0% |
| !! | TAGTAATTAAATCTGAATTG+AGG | - | tig0023067:53987-54006 | None:intergenic | 20.0% |
| !! | TCAATTCAGATTTAATTACT+AGG | + | tig0023067:53986-54005 | Msa1404500:intron | 20.0% |
| !!! | ATTTATTTATTTCTGGTAGT+TGG | + | tig0023067:54019-54038 | Msa1404500:intron | 20.0% |
| !!! | AAATTTATCCTTTTTTTTCC+AGG | + | tig0023067:56539-56558 | Msa1404500:intron | 20.0% |
| !! | TTTGTATACTACTTATTGTT+GGG | + | tig0023067:56909-56928 | Msa1404500:intron | 20.0% |
| !! | ATTAAGAAACAGACATTTAT+CGG | - | tig0023067:57005-57024 | None:intergenic | 20.0% |
| !! | TTGAAGTTAATTCTAATCTT+TGG | + | tig0023067:57267-57286 | Msa1404500:intron | 20.0% |
| ! | TTTGTCTATAAAACCAGAAA+GGG | - | tig0023067:53704-53723 | None:intergenic | 25.0% |
| !! | TTTTGTCTATAAAACCAGAA+AGG | - | tig0023067:53705-53724 | None:intergenic | 25.0% |
| !! | GTGTGTTGTGTTATTATTAA+CGG | + | tig0023067:53793-53812 | Msa1404500:five_prime_UTR | 25.0% |
| ! | AACTAACATTCATTCATTCA+AGG | + | tig0023067:53850-53869 | Msa1404500:five_prime_UTR | 25.0% |
| ! | AAAATCAAATTAGACCCAAA+GGG | - | tig0023067:54200-54219 | None:intergenic | 25.0% |
| ! | CCATAAAAAAAGAAATTGCA+TGG | - | tig0023067:54223-54242 | None:intergenic | 25.0% |
| !!! | CCATGCAATTTCTTTTTTTA+TGG | + | tig0023067:54220-54239 | Msa1404500:intron | 25.0% |
| ! | GATGTTGAAACAATCTATAT+TGG | + | tig0023067:54718-54737 | Msa1404500:CDS | 25.0% |
| !! | CTTTTCACTAAATTCTATCA+TGG | + | tig0023067:54838-54857 | Msa1404500:CDS | 25.0% |
| !! | AATATTTGCTGATAAAGTGA+TGG | + | tig0023067:54972-54991 | Msa1404500:CDS | 25.0% |
| ! | AATCTCTTTCTCAAAAATGT+TGG | - | tig0023067:55057-55076 | None:intergenic | 25.0% |
| !!! | TTTTGAGAAAGAGATTTAAC+AGG | + | tig0023067:55061-55080 | Msa1404500:CDS | 25.0% |
| ! | TTTGAGAAAGAGATTTAACA+GGG | + | tig0023067:55062-55081 | Msa1404500:CDS | 25.0% |
| ! | CTACAAATGATATACTCATA+TGG | - | tig0023067:55759-55778 | None:intergenic | 25.0% |
| ! | TTTGGATTATGATAGTACTA+TGG | + | tig0023067:56202-56221 | Msa1404500:CDS | 25.0% |
| ! | TTTAAAAGAGTGAGTTCATT+TGG | - | tig0023067:56443-56462 | None:intergenic | 25.0% |
| ! | TTATATACAGAAACTACTGA+TGG | + | tig0023067:56643-56662 | Msa1404500:CDS | 25.0% |
| !!! | ACTTTTTTATTACTAACCTG+AGG | - | tig0023067:56832-56851 | None:intergenic | 25.0% |
| ! | GTTTGTATACTACTTATTGT+TGG | + | tig0023067:56908-56927 | Msa1404500:intron | 25.0% |
| ! | ATAAAAAGGATACTTGAATC+TGG | + | tig0023067:56953-56972 | Msa1404500:intron | 25.0% |
| ! | AGTTCATGATCTTAGAAATA+AGG | - | tig0023067:57316-57335 | None:intergenic | 25.0% |
| ! | GAAACATATACTAATGCTAT+TGG | + | tig0023067:57710-57729 | Msa1404500:three_prime_UTR | 25.0% |
| ! | TTGTAGTATTTGTGAATACT+TGG | + | tig0023067:57738-57757 | Msa1404500:three_prime_UTR | 25.0% |
| ! | GTTGGGATTAGAAATAAAAA+TGG | - | tig0023067:57792-57811 | None:intergenic | 25.0% |
| ! | TTCAACAACTTAGATACAAT+CGG | - | tig0023067:57828-57847 | None:intergenic | 25.0% |
| !! | ATTCAAGGTTAGCTTAACTT+AGG | + | tig0023067:53865-53884 | Msa1404500:intron | 30.0% |
| ! | ATTTTGTCAATTCAACCCTT+TGG | + | tig0023067:54182-54201 | Msa1404500:intron | 30.0% |
| ! | TTTTGTCAATTCAACCCTTT+GGG | + | tig0023067:54183-54202 | Msa1404500:intron | 30.0% |
| GAAAATCAAATTAGACCCAA+AGG | - | tig0023067:54201-54220 | None:intergenic | 30.0% | |
| !!! | ATGCTAGTTTGCTAGTTTTT+TGG | + | tig0023067:54301-54320 | Msa1404500:intron | 30.0% |
| !!! | AGTTGTATTTTTGCTGTTGT+AGG | + | tig0023067:54367-54386 | Msa1404500:intron | 30.0% |
| TGAAGTAAGATCTAACAAGT+TGG | - | tig0023067:54440-54459 | None:intergenic | 30.0% | |
| TTGTTAGATCTTACTTCATG+CGG | + | tig0023067:54442-54461 | Msa1404500:CDS | 30.0% | |
| TAGAATTTAGTGAAAAGCTC+AGG | - | tig0023067:54835-54854 | None:intergenic | 30.0% | |
| TTCTGAATTCTGACCTTATA+GGG | + | tig0023067:55172-55191 | Msa1404500:CDS | 30.0% | |
| ! | AGGAATCAGCTTAAAACTTT+TGG | + | tig0023067:55458-55477 | Msa1404500:CDS | 30.0% |
| ! | TTTTACAACATGCTGAAATG+AGG | + | tig0023067:55496-55515 | Msa1404500:CDS | 30.0% |
| TTTACAACATGCTGAAATGA+GGG | + | tig0023067:55497-55516 | Msa1404500:CDS | 30.0% | |
| AAAAGGATAAACGACACATT+TGG | + | tig0023067:55609-55628 | Msa1404500:CDS | 30.0% | |
| GAGTATATCATTTGTAGACA+AGG | + | tig0023067:55762-55781 | Msa1404500:CDS | 30.0% | |
| ! | GAGAAGATAGATGAGATTTT+AGG | + | tig0023067:55789-55808 | Msa1404500:CDS | 30.0% |
| !! | CAGATAGCTTTCTAAAGTTT+GGG | - | tig0023067:56133-56152 | None:intergenic | 30.0% |
| !! | ACAGATAGCTTTCTAAAGTT+TGG | - | tig0023067:56134-56153 | None:intergenic | 30.0% |
| ! | AAACTTTAGAAAGCTATCTG+TGG | + | tig0023067:56133-56152 | Msa1404500:CDS | 30.0% |
| ACATTGTTTCAGCTTATAAG+AGG | + | tig0023067:56159-56178 | Msa1404500:CDS | 30.0% | |
| CACAATGAAAACACAATTCT+TGG | - | tig0023067:56300-56319 | None:intergenic | 30.0% | |
| ! | AATTGTGTTTTCATTGTGAG+TGG | + | tig0023067:56302-56321 | Msa1404500:CDS | 30.0% |
| ! | TTTTCTTCTTGTGAAAAGCT+TGG | + | tig0023067:56353-56372 | Msa1404500:CDS | 30.0% |
| TTATGCATGAAAGAATGTTG+TGG | + | tig0023067:56464-56483 | Msa1404500:intron | 30.0% | |
| TCTGTATATAACTGCATAAC+TGG | - | tig0023067:56634-56653 | None:intergenic | 30.0% | |
| ! | GTTTAACTTCCACAATGTAT+GGG | - | tig0023067:56810-56829 | None:intergenic | 30.0% |
| TCGTAGATCAAAGAAAATAG+CGG | - | tig0023067:57190-57209 | None:intergenic | 30.0% | |
| ! | TTGGTCATGAATTCTTTTGA+AGG | + | tig0023067:57286-57305 | Msa1404500:intron | 30.0% |
| ! | TGGTCATGAATTCTTTTGAA+GGG | + | tig0023067:57287-57306 | Msa1404500:intron | 30.0% |
| TCATGATCTTAGAAATAAGG+AGG | - | tig0023067:57313-57332 | None:intergenic | 30.0% | |
| TCTGATAACAATGCAACAAA+AGG | + | tig0023067:57413-57432 | Msa1404500:CDS | 30.0% | |
| CTGATAACAATGCAACAAAA+GGG | + | tig0023067:57414-57433 | Msa1404500:CDS | 30.0% | |
| !! | AAGTAATATTTGGCTTTGCT+TGG | - | tig0023067:57570-57589 | None:intergenic | 30.0% |
| AAGCAAAGCCAAATATTACT+TGG | + | tig0023067:57569-57588 | Msa1404500:CDS | 30.0% | |
| TGTGTCTTCCAAGTAATATT+TGG | - | tig0023067:57580-57599 | None:intergenic | 30.0% | |
| ! | TTAGAAAAGCTTGCTTAATG+AGG | - | tig0023067:57681-57700 | None:intergenic | 30.0% |
| ! | CAAGCTTTTCTAATCTATGT+AGG | + | tig0023067:57688-57707 | Msa1404500:three_prime_UTR | 30.0% |
| AGTATTTGTGAATACTTGGT+TGG | + | tig0023067:57742-57761 | Msa1404500:three_prime_UTR | 30.0% | |
| GATTGTATCTAAGTTGTTGA+AGG | + | tig0023067:57827-57846 | Msa1404500:three_prime_UTR | 30.0% | |
| TAACGGAGAAGAAGAATCTT+TGG | + | tig0023067:53810-53829 | Msa1404500:five_prime_UTR | 35.0% | |
| CTGAATTGAGGCAATGTTTA+AGG | - | tig0023067:53975-53994 | None:intergenic | 35.0% | |
| GATGAAATCAACAACAGTGT+TGG | + | tig0023067:54541-54560 | Msa1404500:CDS | 35.0% | |
| GAAAGAGGAAAATGGTAAGT+GGG | + | tig0023067:54639-54658 | Msa1404500:CDS | 35.0% | |
| ! | CTTCTTTTACAGCTGAAAGA+TGG | + | tig0023067:54685-54704 | Msa1404500:CDS | 35.0% |
| AATTTAGTGAAAAGCTCAGG+TGG | - | tig0023067:54832-54851 | None:intergenic | 35.0% | |
| GTTTCTGTAAGCAACATCTA+TGG | + | tig0023067:54860-54879 | Msa1404500:CDS | 35.0% | |
| AAGTTCATCTCTAACAGGAA+GGG | - | tig0023067:55142-55161 | None:intergenic | 35.0% | |
| CTAAGAAGTTCATCTCTAAC+AGG | - | tig0023067:55147-55166 | None:intergenic | 35.0% | |
| CTTCTGAATTCTGACCTTAT+AGG | + | tig0023067:55171-55190 | Msa1404500:CDS | 35.0% | |
| ! | CGAAAGTATGAAACCCTATA+AGG | - | tig0023067:55188-55207 | None:intergenic | 35.0% |
| TTCATACTTTCGACTATGCT+AGG | + | tig0023067:55196-55215 | Msa1404500:CDS | 35.0% | |
| TACATAGGTCTTGAGTACTA+TGG | + | tig0023067:55276-55295 | Msa1404500:CDS | 35.0% | |
| AGCATTAAGATTCTTCCTGT+TGG | + | tig0023067:55309-55328 | Msa1404500:CDS | 35.0% | |
| CTTCCTGTTGGTATTCATAT+AGG | + | tig0023067:55321-55340 | Msa1404500:CDS | 35.0% | |
| GATGACATGGATATCTTCAA+AGG | + | tig0023067:55438-55457 | Msa1404500:CDS | 35.0% | |
| ! | CAGCTTAAAACTTTTGGCAA+TGG | + | tig0023067:55464-55483 | Msa1404500:CDS | 35.0% |
| TTACAACATGCTGAAATGAG+GGG | + | tig0023067:55498-55517 | Msa1404500:CDS | 35.0% | |
| AAACTTATGCAACCGTGAAA+AGG | + | tig0023067:55592-55611 | Msa1404500:CDS | 35.0% | |
| !!! | TGTGTCGTTTATCCTTTTCA+CGG | - | tig0023067:55607-55626 | None:intergenic | 35.0% |
| ! | GTTGTATCGATCAAGATTAC+AGG | - | tig0023067:55651-55670 | None:intergenic | 35.0% |
| AATCGCTTACTATGCAATTG+CGG | + | tig0023067:55689-55708 | Msa1404500:CDS | 35.0% | |
| ! | AGGATTTCGAGTAATAGCTT+TGG | + | tig0023067:56106-56125 | Msa1404500:CDS | 35.0% |
| CATAATCCAAAAGAATCGCT+CGG | - | tig0023067:56193-56212 | None:intergenic | 35.0% | |
| ! | TGTTTTCATTGTGAGTGGAA+AGG | + | tig0023067:56307-56326 | Msa1404500:CDS | 35.0% |
| GAGTGAGTTCATTTGGTATA+AGG | - | tig0023067:56436-56455 | None:intergenic | 35.0% | |
| TTCTTTGATGGAGATTGCTT+AGG | + | tig0023067:56502-56521 | Msa1404500:intron | 35.0% | |
| ATCTGTTTCCAGTCAAAATC+AGG | - | tig0023067:56604-56623 | None:intergenic | 35.0% | |
| TAAGGAACTTCTTGATCATC+TGG | + | tig0023067:56744-56763 | Msa1404500:CDS | 35.0% | |
| ! | GGTTTAACTTCCACAATGTA+TGG | - | tig0023067:56811-56830 | None:intergenic | 35.0% |
| ! | CACTTGACATTTTTGTTGCA+GGG | + | tig0023067:57360-57379 | Msa1404500:intron | 35.0% |
| CCAATGCATAGAACAAAATC+TGG | - | tig0023067:57447-57466 | None:intergenic | 35.0% | |
| ! | CCAGATTTTGTTCTATGCAT+TGG | + | tig0023067:57444-57463 | Msa1404500:CDS | 35.0% |
| !! | TTTGCTTGGTTTTTGACCAA+CGG | - | tig0023067:57556-57575 | None:intergenic | 35.0% |
| TGCTTAATGAGGAGATAACT+GGG | - | tig0023067:57670-57689 | None:intergenic | 35.0% | |
| TTGCTTAATGAGGAGATAAC+TGG | - | tig0023067:57671-57690 | None:intergenic | 35.0% | |
| ! | CTTGGTTGGTTATCTTGTAT+TGG | + | tig0023067:57756-57775 | Msa1404500:three_prime_UTR | 35.0% |
| GATCATCCTCTCTTGAGAAA+TGG | - | tig0023067:54584-54603 | None:intergenic | 40.0% | |
| CAAGAGAGGATGATCATTGT+TGG | + | tig0023067:54589-54608 | Msa1404500:CDS | 40.0% | |
| TCTTTCCTTTGTGCCTTCAA+TGG | - | tig0023067:54625-54644 | None:intergenic | 40.0% | |
| ! | ATTGAAGGCACAAAGGAAAG+AGG | + | tig0023067:54624-54643 | Msa1404500:CDS | 40.0% |
| GCACAAAGGAAAGAGGAAAA+TGG | + | tig0023067:54631-54650 | Msa1404500:CDS | 40.0% | |
| GGAAAGAGGAAAATGGTAAG+TGG | + | tig0023067:54638-54657 | Msa1404500:CDS | 40.0% | |
| ATGGTAAGTGGGAATTCACT+TGG | + | tig0023067:54650-54669 | Msa1404500:CDS | 40.0% | |
| TGGTAAGTGGGAATTCACTT+GGG | + | tig0023067:54651-54670 | Msa1404500:CDS | 40.0% | |
| TTACAGCTGAAAGATGGTCT+TGG | + | tig0023067:54691-54710 | Msa1404500:CDS | 40.0% | |
| GCAACATCATCTTGCTCAAT+TGG | - | tig0023067:54766-54785 | None:intergenic | 40.0% | |
| ! | GGAAGCATGTAGTGAAACAA+AGG | - | tig0023067:54886-54905 | None:intergenic | 40.0% |
| !! | GTCGATTTGATCGATCTCTT+TGG | + | tig0023067:54926-54945 | Msa1404500:CDS | 40.0% |
| ATTTGATCGATCTCTTTGGC+AGG | + | tig0023067:54930-54949 | Msa1404500:CDS | 40.0% | |
| ! | ACCCTGATGAGGATTTTGTT+TGG | + | tig0023067:55004-55023 | Msa1404500:CDS | 40.0% |
| CCCAAACAAAATCCTCATCA+GGG | - | tig0023067:55008-55027 | None:intergenic | 40.0% | |
| !! | CCCTGATGAGGATTTTGTTT+GGG | + | tig0023067:55005-55024 | Msa1404500:CDS | 40.0% |
| ACCCAAACAAAATCCTCATC+AGG | - | tig0023067:55009-55028 | None:intergenic | 40.0% | |
| ATGTTGGAAGAACCATCAAG+TGG | - | tig0023067:55041-55060 | None:intergenic | 40.0% | |
| GAAAGAGATTTAACAGGGCA+AGG | + | tig0023067:55067-55086 | Msa1404500:CDS | 40.0% | |
| TATATCTCGGACGAAGGAAA+AGG | - | tig0023067:55114-55133 | None:intergenic | 40.0% | |
| GAAGTTCATCTCTAACAGGA+AGG | - | tig0023067:55143-55162 | None:intergenic | 40.0% | |
| TCCTGTTGCAGTAGAATGTT+GGG | + | tig0023067:55228-55247 | Msa1404500:CDS | 40.0% | |
| ATTGCTTATCAATCCAAGCG+AGG | + | tig0023067:55252-55271 | Msa1404500:CDS | 40.0% | |
| TGGCCTATATGAATACCAAC+AGG | - | tig0023067:55327-55346 | None:intergenic | 40.0% | |
| !! | TCTTTCTGAGACAGAAAGCA+AGG | + | tig0023067:55365-55384 | Msa1404500:CDS | 40.0% |
| GAGCTAAGAAACCAGTTCAA+AGG | + | tig0023067:55393-55412 | Msa1404500:CDS | 40.0% | |
| TCACAGTTTGACCTTTGAAC+TGG | - | tig0023067:55407-55426 | None:intergenic | 40.0% | |
| AAAGGTCAAACTGTGATGCT+TGG | + | tig0023067:55411-55430 | Msa1404500:CDS | 40.0% | |
| AAGGTCAAACTGTGATGCTT+GGG | + | tig0023067:55412-55431 | Msa1404500:CDS | 40.0% | |
| GGATAAACGACACATTTGGA+AGG | + | tig0023067:55613-55632 | Msa1404500:CDS | 40.0% | |
| AAGATTACAGGTGTGTATCC+AGG | - | tig0023067:55639-55658 | None:intergenic | 40.0% | |
| TTGTTACAGCAGTGAGAGAT+GGG | + | tig0023067:55721-55740 | Msa1404500:CDS | 40.0% | |
| ! | TATCCAAAAGAAGAGCATGC+TGG | + | tig0023067:55824-55843 | Msa1404500:CDS | 40.0% |
| GCAACAGCATCAATATTCCA+CGG | - | tig0023067:55906-55925 | None:intergenic | 40.0% | |
| !! | GCATATGTTTTTCAGACTCC+GGG | - | tig0023067:55956-55975 | None:intergenic | 40.0% |
| !! | CGCATATGTTTTTCAGACTC+CGG | - | tig0023067:55957-55976 | None:intergenic | 40.0% |
| !! | TGCGTCATGAGAAGCATTAT+AGG | + | tig0023067:55973-55992 | Msa1404500:CDS | 40.0% |
| TACGCACGATGTTGCATATT+GGG | + | tig0023067:56004-56023 | Msa1404500:CDS | 40.0% | |
| !!! | TGGGGAATTGGTTTTGGTTT+AGG | + | tig0023067:56086-56105 | Msa1404500:CDS | 40.0% |
| AGAGAAACACTCTCACTGAA+TGG | + | tig0023067:56330-56349 | Msa1404500:CDS | 40.0% | |
| ! | GGTATAAGGAGTATGACACA+AGG | - | tig0023067:56422-56441 | None:intergenic | 40.0% |
| ! | TGGCTTGTCCTGGAAAAAAA+AGG | - | tig0023067:56550-56569 | None:intergenic | 40.0% |
| GACAAGCCATACTGAAGAAT+GGG | + | tig0023067:56561-56580 | Msa1404500:CDS | 40.0% | |
| AAGCTTCCCATTCTTCAGTA+TGG | - | tig0023067:56570-56589 | None:intergenic | 40.0% | |
| !! | TTTCTGTGCCTGATTTTGAC+TGG | + | tig0023067:56593-56612 | Msa1404500:CDS | 40.0% |
| GAATTTGCAGACCGAGATTT+CGG | + | tig0023067:56709-56728 | Msa1404500:CDS | 40.0% | |
| CTTGACATGAACCGAAATCT+CGG | - | tig0023067:56723-56742 | None:intergenic | 40.0% | |
| TTTCGGTTCATGTCAAGCTA+AGG | + | tig0023067:56726-56745 | Msa1404500:CDS | 40.0% | |
| GAGCCTGTTTCAGTTAAAAG+TGG | + | tig0023067:56784-56803 | Msa1404500:CDS | 40.0% | |
| TAAAAGTGGCCCATACATTG+TGG | + | tig0023067:56798-56817 | Msa1404500:CDS | 40.0% | |
| CATTGTGGAAGTTAAACCTC+AGG | + | tig0023067:56813-56832 | Msa1404500:CDS | 40.0% | |
| TGATCTACGATTGACAACAC+TGG | + | tig0023067:57200-57219 | Msa1404500:intron | 40.0% | |
| CCTGCAACAAAAATGTCAAG+TGG | - | tig0023067:57362-57381 | None:intergenic | 40.0% | |
| ! | CCACTTGACATTTTTGTTGC+AGG | + | tig0023067:57359-57378 | Msa1404500:intron | 40.0% |
| AGATCAGATGAGGACATGTT+TGG | + | tig0023067:57474-57493 | Msa1404500:CDS | 40.0% | |
| GATCAGATGAGGACATGTTT+GGG | + | tig0023067:57475-57494 | Msa1404500:CDS | 40.0% | |
| ATCAGATGAGGACATGTTTG+GGG | + | tig0023067:57476-57495 | Msa1404500:CDS | 40.0% | |
| TTGGGGTAATAACAAGTGCA+AGG | + | tig0023067:57493-57512 | Msa1404500:CDS | 40.0% | |
| TGGGGTAATAACAAGTGCAA+GGG | + | tig0023067:57494-57513 | Msa1404500:CDS | 40.0% | |
| ! | AAGACACAAGCGAGATTTTG+AGG | + | tig0023067:57592-57611 | Msa1404500:CDS | 40.0% |
| !! | GAGATTTTGAGGATGTTGCA+AGG | + | tig0023067:57603-57622 | Msa1404500:CDS | 40.0% |
| ! | AGCAGTTTGTTCAGAAGCAT+TGG | - | tig0023067:57634-57653 | None:intergenic | 40.0% |
| TCGGTAGTAGCAACAATGTT+GGG | - | tig0023067:57809-57828 | None:intergenic | 40.0% | |
| ATCGGTAGTAGCAACAATGT+TGG | - | tig0023067:57810-57829 | None:intergenic | 40.0% | |
| GAGTGAGTGAGTGAGCAAAA+TGG | + | tig0023067:54399-54418 | Msa1404500:exon | 45.0% | |
| GAGTGAGCAAAATGGCTTCA+AGG | + | tig0023067:54407-54426 | Msa1404500:exon | 45.0% | |
| TTCTTCTCACGACCGAAAGA+CGG | - | tig0023067:54472-54491 | None:intergenic | 45.0% | |
| CTTTCGGTCGTGAGAAGAAA+AGG | + | tig0023067:54473-54492 | Msa1404500:CDS | 45.0% | |
| GAAGAAAAGGCTTCCAAGAG+TGG | + | tig0023067:54486-54505 | Msa1404500:CDS | 45.0% | |
| CTCTCTTGAGAAATGGAGGA+CGG | - | tig0023067:54577-54596 | None:intergenic | 45.0% | |
| CATCCTCTCTTGAGAAATGG+AGG | - | tig0023067:54581-54600 | None:intergenic | 45.0% | |
| TGGTAACCAGCTTCCATTGA+AGG | + | tig0023067:54609-54628 | Msa1404500:CDS | 45.0% | |
| TTTGTGCCTTCAATGGAAGC+TGG | - | tig0023067:54618-54637 | None:intergenic | 45.0% | |
| ! | AGCTTCCATTGAAGGCACAA+AGG | + | tig0023067:54617-54636 | Msa1404500:CDS | 45.0% |
| TAGTGAAAAGCTCAGGTGGA+AGG | - | tig0023067:54828-54847 | None:intergenic | 45.0% | |
| TCAAATCGACCACCAAGATC+AGG | - | tig0023067:54916-54935 | None:intergenic | 45.0% | |
| GGAAGTTATCAACCCTGATG+AGG | + | tig0023067:54993-55012 | Msa1404500:CDS | 45.0% | |
| GGTTCATGACTACCACTTGA+TGG | + | tig0023067:55026-55045 | Msa1404500:CDS | 45.0% | |
| AGATTTAACAGGGCAAGGCT+TGG | + | tig0023067:55072-55091 | Msa1404500:CDS | 45.0% | |
| ACGAAGGAAAAGGACTATGG+AGG | - | tig0023067:55104-55123 | None:intergenic | 45.0% | |
| ! | AGGAAGGGTTCGGTATATCT+CGG | - | tig0023067:55127-55146 | None:intergenic | 45.0% |
| CATCTCTAACAGGAAGGGTT+CGG | - | tig0023067:55137-55156 | None:intergenic | 45.0% | |
| ACATTCTACTGCAACAGGAG+AGG | - | tig0023067:55227-55246 | None:intergenic | 45.0% | |
| CTCCTGTTGCAGTAGAATGT+TGG | + | tig0023067:55227-55246 | Msa1404500:CDS | 45.0% | |
| TCCCAACATTCTACTGCAAC+AGG | - | tig0023067:55232-55251 | None:intergenic | 45.0% | |
| ! | GATTCATGACTGACTCAAGC+TGG | - | tig0023067:55347-55366 | None:intergenic | 45.0% |
| AGGTCAAACTGTGATGCTTG+GGG | + | tig0023067:55413-55432 | Msa1404500:CDS | 45.0% | |
| ACATGCTGAAATGAGGGGAA+AGG | + | tig0023067:55503-55522 | Msa1404500:CDS | 45.0% | |
| AATGAGGGGAAAGGTTGTTC+TGG | + | tig0023067:55512-55531 | Msa1404500:CDS | 45.0% | |
| TCGATACAACACTCCAGAGT+TGG | + | tig0023067:55661-55680 | Msa1404500:CDS | 45.0% | |
| CGATACAACACTCCAGAGTT+GGG | + | tig0023067:55662-55681 | Msa1404500:CDS | 45.0% | |
| CTTGTTACAGCAGTGAGAGA+TGG | + | tig0023067:55720-55739 | Msa1404500:CDS | 45.0% | |
| ! | CTGGTGGTGTCTGAATTCAT+TGG | + | tig0023067:55843-55862 | Msa1404500:CDS | 45.0% |
| TGATGCTGTTGCTGAAGCTA+TGG | + | tig0023067:55914-55933 | Msa1404500:CDS | 45.0% | |
| AGCTATGGATTCCGCCTTAA+TGG | + | tig0023067:55929-55948 | Msa1404500:CDS | 45.0% | |
| GTACGCACGATGTTGCATAT+TGG | + | tig0023067:56003-56022 | Msa1404500:CDS | 45.0% | |
| CTTCTTGCAGGATCTGGAAA+GGG | + | tig0023067:56034-56053 | Msa1404500:CDS | 45.0% | |
| CTTGTAGAGATCATCTGAGG+AGG | + | tig0023067:56057-56076 | Msa1404500:CDS | 45.0% | |
| !! | AGATGCTGGGGAATTGGTTT+TGG | + | tig0023067:56080-56099 | Msa1404500:CDS | 45.0% |
| ! | GGTGTTGCACTAATTGATCC+AGG | - | tig0023067:56233-56252 | None:intergenic | 45.0% |
| ATGGAAACAGCTTCAGCACT+AGG | - | tig0023067:56254-56273 | None:intergenic | 45.0% | |
| ACTGCACAAGCTGTTCAAGA+TGG | - | tig0023067:56273-56292 | None:intergenic | 45.0% | |
| ! | TTCTTCAGTATGGCTTGTCC+TGG | - | tig0023067:56560-56579 | None:intergenic | 45.0% |
| GGACAAGCCATACTGAAGAA+TGG | + | tig0023067:56560-56579 | Msa1404500:intron | 45.0% | |
| !!! | GGGCCACTTTTAACTGAAAC+AGG | - | tig0023067:56790-56809 | None:intergenic | 45.0% |
| TGCTAGCGTAACATGGTTCT+AGG | - | tig0023067:56979-56998 | None:intergenic | 45.0% | |
| AGAACCATGTTACGCTAGCA+TGG | + | tig0023067:56979-56998 | Msa1404500:intron | 45.0% | |
| ATAGTAGCGCTACAACGTAG+TGG | + | tig0023067:57051-57070 | Msa1404500:intron | 45.0% | |
| !! | CAACACTGGCTTGAAGTAGT+TGG | + | tig0023067:57214-57233 | Msa1404500:intron | 45.0% |
| TTTGTTGCAGGGTGTGAGTA+AGG | + | tig0023067:57371-57390 | Msa1404500:intron | 45.0% | |
| TTGTTGCAGGGTGTGAGTAA+GGG | + | tig0023067:57372-57391 | Msa1404500:intron | 45.0% | |
| ! | TGGTGATGACAGATCAGATG+AGG | + | tig0023067:57464-57483 | Msa1404500:CDS | 45.0% |
| CGTCCTCCATTTCTCAAGAG+AGG | + | tig0023067:54575-54594 | Msa1404500:CDS | 50.0% | |
| GTGGGAATTCACTTGGGATG+AGG | + | tig0023067:54657-54676 | Msa1404500:CDS | 50.0% | |
| AGCTCAGGTGGAAGGAAAGT+TGG | - | tig0023067:54820-54839 | None:intergenic | 50.0% | |
| CGGACGAAGGAAAAGGACTA+TGG | - | tig0023067:55107-55126 | None:intergenic | 50.0% | |
| GTTCGGTATATCTCGGACGA+AGG | - | tig0023067:55120-55139 | None:intergenic | 50.0% | |
| CAATCCAAGCGAGGCTACAT+AGG | + | tig0023067:55261-55280 | Msa1404500:CDS | 50.0% | |
| AAGACCTATGTAGCCTCGCT+TGG | - | tig0023067:55268-55287 | None:intergenic | 50.0% | |
| TCAAACTGTGATGCTTGGGG+TGG | + | tig0023067:55416-55435 | Msa1404500:CDS | 50.0% | |
| CAAATCGCAAACCCTGCTAG+AGG | + | tig0023067:55537-55556 | Msa1404500:CDS | 50.0% | |
| CTTCTTGCACATCCTTTCCG+CGG | - | tig0023067:55563-55582 | None:intergenic | 50.0% | |
| AACGACACATTTGGAAGGCC+TGG | + | tig0023067:55618-55637 | Msa1404500:CDS | 50.0% | |
| AAGCGATTCTCTCCCAACTC+TGG | - | tig0023067:55677-55696 | None:intergenic | 50.0% | |
| ! | CCACCAGCATGCTCTTCTTT+TGG | - | tig0023067:55830-55849 | None:intergenic | 50.0% |
| ! | CCAAAAGAAGAGCATGCTGG+TGG | + | tig0023067:55827-55846 | Msa1404500:CDS | 50.0% |
| AATCGCGCCGCTTAATGATG+GGG | - | tig0023067:55874-55893 | None:intergenic | 50.0% | |
| GAATCGCGCCGCTTAATGAT+GGG | - | tig0023067:55875-55894 | None:intergenic | 50.0% | |
| CATCATTAAGCGGCGCGATT+CGG | + | tig0023067:55874-55893 | Msa1404500:CDS | 50.0% | |
| ATCATTAAGCGGCGCGATTC+GGG | + | tig0023067:55875-55894 | Msa1404500:CDS | 50.0% | |
| TTCAGACTCCGGGACCATTA+AGG | - | tig0023067:55946-55965 | None:intergenic | 50.0% | |
| GCTTCTTGCAGGATCTGGAA+AGG | + | tig0023067:56033-56052 | Msa1404500:CDS | 50.0% | |
| GGGCTTGTAGAGATCATCTG+AGG | + | tig0023067:56054-56073 | Msa1404500:CDS | 50.0% | |
| ATCATCTGAGGAGGAGATGC+TGG | + | tig0023067:56066-56085 | Msa1404500:CDS | 50.0% | |
| TCATCTGAGGAGGAGATGCT+GGG | + | tig0023067:56067-56086 | Msa1404500:CDS | 50.0% | |
| !! | CAAAAGAATCGCTCGGTGCT+TGG | - | tig0023067:56186-56205 | None:intergenic | 50.0% |
| !!! | CAAGCACCGAGCGATTCTTT+TGG | + | tig0023067:56184-56203 | Msa1404500:CDS | 50.0% |
| GATAGTACTATGGTGCAGCC+TGG | + | tig0023067:56212-56231 | Msa1404500:CDS | 50.0% | |
| !! | CTTGGACTTGCTGCAGAACA+CGG | + | tig0023067:56371-56390 | Msa1404500:CDS | 50.0% |
| !! | AGAGTCCAAAGAGAGTGCTC+TGG | + | tig0023067:56675-56694 | Msa1404500:CDS | 50.0% |
| ! | CCAAACCAGAGCACTCTCTT+TGG | - | tig0023067:56683-56702 | None:intergenic | 50.0% |
| !! | CCAAAGAGAGTGCTCTGGTT+TGG | + | tig0023067:56680-56699 | Msa1404500:CDS | 50.0% |
| CAAGGAAACACGTCCGCAAT+GGG | - | tig0023067:57531-57550 | None:intergenic | 50.0% | |
| ! | GGTTTTTGACCAACGGTGCA+AGG | - | tig0023067:57549-57568 | None:intergenic | 50.0% |
| CCAGCAACAGTTGCCACTCT+TGG | - | tig0023067:54502-54521 | None:intergenic | 55.0% | |
| CCAAGAGTGGCAACTGTTGC+TGG | + | tig0023067:54499-54518 | Msa1404500:CDS | 55.0% | |
| GATGCTTGGGGTGGATGACA+TGG | + | tig0023067:55425-55444 | Msa1404500:CDS | 55.0% | |
| GGCTGCTCCCCATCATTAAG+CGG | + | tig0023067:55864-55883 | Msa1404500:CDS | 55.0% | |
| CGAATCGCGCCGCTTAATGA+TGG | - | tig0023067:55876-55895 | None:intergenic | 55.0% | |
| GGATTCCGCCTTAATGGTCC+CGG | + | tig0023067:55935-55954 | Msa1404500:CDS | 55.0% | |
| AGACTCCGGGACCATTAAGG+CGG | - | tig0023067:55943-55962 | None:intergenic | 55.0% | |
| GCGTAGCTTCTTGCAGGATC+TGG | + | tig0023067:56028-56047 | Msa1404500:CDS | 55.0% | |
| CATCTGAGGAGGAGATGCTG+GGG | + | tig0023067:56068-56087 | Msa1404500:CDS | 55.0% | |
| AGGAGGAGATGCTGGGGAAT+TGG | + | tig0023067:56074-56093 | Msa1404500:CDS | 55.0% | |
| TCGGCCATGCTAGCGTAACA+TGG | - | tig0023067:56986-57005 | None:intergenic | 55.0% | |
| GGCATCTCTATCGCCCATTG+CGG | + | tig0023067:57515-57534 | Msa1404500:CDS | 55.0% | |
| GCAAGGAAACACGTCCGCAA+TGG | - | tig0023067:57532-57551 | None:intergenic | 55.0% | |
| GACGTGTTTCCTTGCACCGT+TGG | + | tig0023067:57537-57556 | Msa1404500:CDS | 55.0% | |
| TCATGCGGCTCGCCGTCTTT+CGG | + | tig0023067:54457-54476 | Msa1404500:CDS | 60.0% | |
| CTTCCGCTGTCGCCTGATCT+TGG | + | tig0023067:54901-54920 | Msa1404500:CDS | 60.0% | |
| CCACCAAGATCAGGCGACAG+CGG | - | tig0023067:54907-54926 | None:intergenic | 60.0% | |
| TTGGGCGCGTAGCTTCTTGC+AGG | + | tig0023067:56022-56041 | Msa1404500:CDS | 60.0% | |
| CCGCTGTCGCCTGATCTTGG+TGG | + | tig0023067:54904-54923 | Msa1404500:CDS | 65.0% | |
| GCAAACCCTGCTAGAGGCCG+CGG | + | tig0023067:55543-55562 | Msa1404500:CDS | 65.0% | |
| CCTTTCCGCGGCCTCTAGCA+GGG | - | tig0023067:55551-55570 | None:intergenic | 65.0% | |
| TCCTTTCCGCGGCCTCTAGC+AGG | - | tig0023067:55552-55571 | None:intergenic | 65.0% | |
| ! | GCGCGATTCGGGTGAATCCG+TGG | + | tig0023067:55886-55905 | Msa1404500:CDS | 65.0% |
| CCCTGCTAGAGGCCGCGGAA+AGG | + | tig0023067:55548-55567 | Msa1404500:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0023067 | gene | 53693 | 57936 | 53693 | ID=Msa1404500;Name=Msa1404500 |
| tig0023067 | mRNA | 53693 | 57936 | 53693 | ID=Msa1404500-mRNA-1;Parent=Msa1404500;Name=Msa1404500-mRNA-1;_AED=0.01;_eAED=0.01;_QI=208|1|1|1|0.66|0.5|4|250|855 |
| tig0023067 | exon | 53693 | 53871 | 53693 | ID=Msa1404500-mRNA-1:exon:23639;Parent=Msa1404500-mRNA-1 |
| tig0023067 | exon | 54389 | 56405 | 54389 | ID=Msa1404500-mRNA-1:exon:23640;Parent=Msa1404500-mRNA-1 |
| tig0023067 | exon | 56561 | 56834 | 56561 | ID=Msa1404500-mRNA-1:exon:23641;Parent=Msa1404500-mRNA-1 |
| tig0023067 | exon | 57381 | 57936 | 57381 | ID=Msa1404500-mRNA-1:exon:23642;Parent=Msa1404500-mRNA-1 |
| tig0023067 | five_prime_UTR | 53693 | 53871 | 53693 | ID=Msa1404500-mRNA-1:five_prime_utr;Parent=Msa1404500-mRNA-1 |
| tig0023067 | five_prime_UTR | 54389 | 54417 | 54389 | ID=Msa1404500-mRNA-1:five_prime_utr;Parent=Msa1404500-mRNA-1 |
| tig0023067 | CDS | 54418 | 56405 | 54418 | ID=Msa1404500-mRNA-1:cds;Parent=Msa1404500-mRNA-1 |
| tig0023067 | CDS | 56561 | 56834 | 56561 | ID=Msa1404500-mRNA-1:cds;Parent=Msa1404500-mRNA-1 |
| tig0023067 | CDS | 57381 | 57686 | 57381 | ID=Msa1404500-mRNA-1:cds;Parent=Msa1404500-mRNA-1 |
| tig0023067 | three_prime_UTR | 57687 | 57936 | 57687 | ID=Msa1404500-mRNA-1:three_prime_utr;Parent=Msa1404500-mRNA-1 |
| Gene Sequence |
| Protein sequence |
