AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0315290


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0315290 MtrunA17_Chr2g0285851 98.182 330 6 0 13 342 1 330 0.0 680
Msa0315290 MtrunA17_Chr3g0138981 33.910 289 172 4 54 342 7 276 1.79e-58 192
Msa0315290 MtrunA17_Chr4g0063531 33.101 287 177 8 56 338 59 334 2.38e-42 152
Msa0315290 MtrunA17_Chr8g0378511 31.560 282 178 8 61 338 74 344 8.21e-38 140
Msa0315290 MtrunA17_Chr3g0115401 27.429 350 181 13 60 342 38 381 1.48e-30 120
Msa0315290 MtrunA17_Chr2g0278921 27.920 351 172 13 64 342 43 384 2.56e-29 117
Msa0315290 MtrunA17_Chr8g0377241 30.033 303 189 8 57 345 34 327 5.86e-29 115
Msa0315290 MtrunA17_Chr8g0348991 30.000 280 181 8 63 337 24 293 1.35e-28 114
Msa0315290 MtrunA17_Chr3g0122681 27.303 304 208 7 45 345 18 311 4.37e-24 101
Msa0315290 MtrunA17_Chr3g0129221 30.282 284 171 10 64 342 9 270 1.51e-22 97.1
Msa0315290 MtrunA17_Chr2g0326541 26.923 286 188 7 61 340 17 287 3.03e-19 87.8
Msa0315290 MtrunA17_Chr8g0378571 30.357 224 140 4 64 274 7 227 5.09e-19 86.7
Msa0315290 MtrunA17_Chr7g0260051 29.954 217 135 7 64 270 4 213 5.20e-17 80.9
Msa0315290 MtrunA17_Chr4g0011151 23.423 333 210 11 24 344 80 379 1.24e-16 80.5
Msa0315290 MtrunA17_Chr4g0011171 23.123 333 211 11 24 344 80 379 5.01e-16 79.0
Msa0315290 MtrunA17_Chr4g0011221 23.423 333 210 11 24 344 80 379 7.25e-16 78.2
Msa0315290 MtrunA17_Chr6g0459491 24.399 291 193 9 65 340 57 335 8.84e-16 77.8
Msa0315290 MtrunA17_Chr4g0011161 23.171 328 210 10 24 340 80 376 1.45e-15 77.4
Msa0315290 MtrunA17_Chr4g0011191 25.100 251 155 7 24 273 80 298 5.21e-15 74.7
Msa0315290 MtrunA17_Chr4g0010131 21.239 339 231 10 27 344 25 348 3.43e-14 73.2
Msa0315290 MtrunA17_Chr4g0060541 21.739 299 207 8 56 340 23 308 3.74e-11 63.9
Msa0315290 MtrunA17_Chr7g0225551 22.973 296 203 9 58 340 43 326 6.07e-11 63.2
Msa0315290 MtrunA17_Chr7g0243481 32.192 146 93 5 168 311 165 306 7.38e-11 62.8
Msa0315290 MtrunA17_Chr3g0144091 33.913 115 65 5 68 179 143 249 9.96e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0315290 AT1G30090.1 73.193 332 88 1 13 343 1 332 0.0 530
Msa0315290 AT2G24540.1 37.793 299 177 6 47 342 11 303 5.30e-68 218
Msa0315290 AT1G55270.1 32.616 279 179 7 61 338 75 345 3.77e-41 149
Msa0315290 AT1G22040.1 29.942 344 170 13 64 342 43 380 6.67e-34 130
Msa0315290 AT1G67480.3 31.633 294 190 6 55 345 30 315 1.14e-33 128
Msa0315290 AT1G67480.1 31.633 294 190 6 55 345 30 315 1.14e-33 128
Msa0315290 AT1G67480.2 31.633 294 190 6 55 345 30 315 1.14e-33 128
Msa0315290 AT1G27420.1 27.303 304 171 9 63 343 9 285 3.11e-23 99.0
Msa0315290 AT1G55270.2 29.018 224 151 6 116 338 3 219 1.70e-21 93.6
Msa0315290 AT5G60570.2 27.397 292 190 7 57 340 39 316 4.29e-21 93.6
Msa0315290 AT5G60570.1 27.397 292 190 7 57 340 39 316 4.29e-21 93.6
Msa0315290 AT5G60570.3 27.397 292 190 7 57 340 39 316 4.29e-21 93.6
Msa0315290 AT3G63220.1 28.125 288 174 10 64 340 4 269 8.37e-20 89.4
Msa0315290 AT3G63220.3 28.125 288 174 10 64 340 11 276 9.74e-20 89.4
Msa0315290 AT3G63220.2 28.125 288 174 10 64 340 11 276 9.74e-20 89.4
Msa0315290 AT1G16250.2 27.530 247 162 7 61 297 5 244 6.68e-19 87.4
Msa0315290 AT1G16250.1 27.530 247 162 7 61 297 5 244 6.68e-19 87.4
Msa0315290 AT3G61350.2 23.571 280 193 9 64 337 21 285 6.98e-18 84.0
Msa0315290 AT3G61350.1 23.571 280 193 9 64 337 21 285 6.98e-18 84.0
Msa0315290 AT2G21950.1 27.336 289 184 10 64 342 20 292 9.64e-17 80.9
Msa0315290 AT4G39580.1 25.874 286 184 10 68 342 26 294 2.29e-15 77.0
Msa0315290 AT1G60570.1 25.342 292 189 11 61 340 17 291 1.90e-13 71.2
Msa0315290 AT1G26930.1 25.106 235 159 6 64 294 71 292 2.74e-11 64.7
Msa0315290 AT1G80440.1 29.279 222 143 7 64 274 3 221 4.19e-11 63.9

Find 103 sgRNAs with CRISPR-Local

Find 306 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCAGGTAAGCCCGGAATTA+AGG 0.209782 2_4:-11508499 None:intergenic
GGTTCAAGCGTGGTTGTTTA+TGG 0.236597 2_4:+11509230 Msa0315290:CDS
TAATTGTCTTCTTCGTCTTC+CGG 0.313205 2_4:+11508533 Msa0315290:CDS
TTGTCCTTGCAAGGCATTGC+AGG 0.324010 2_4:-11508750 None:intergenic
TGACACTATCTCCCAAGTTT+AGG 0.343062 2_4:+11508409 Msa0315290:CDS
AGCCATAGTTTCCCAGCTAT+TGG 0.348050 2_4:-11509183 None:intergenic
TGCCAACATGGGAACCAATA+TGG 0.351045 2_4:+11509058 Msa0315290:CDS
TGTTTCTTATTAAAGGGTTT+AGG 0.355686 2_4:+11508293 Msa0315290:intron
CTTCCCAGGAATCGGCTTCC+TGG 0.361899 2_4:-11509304 None:intergenic
TAGATCCGATTAGCGGGAAT+TGG 0.368843 2_4:+11509027 Msa0315290:CDS
CCTCTAGGAGAGACATAAAA+AGG 0.369553 2_4:-11509140 None:intergenic
AACCAATAGCTGGGAAACTA+TGG 0.377206 2_4:+11509181 Msa0315290:CDS
AGAGAAGAACCCTTAATTCC+GGG 0.383870 2_4:+11508489 Msa0315290:CDS
AAGAGAAGAACCCTTAATTC+CGG 0.391873 2_4:+11508488 Msa0315290:CDS
GTTCAGAACTGCAGCATCAT+AGG 0.399835 2_4:-11509084 None:intergenic
ATAACCAGGAAGCCGATTCC+TGG 0.404765 2_4:+11509300 Msa0315290:CDS
TCAGGCAAAGGGGCCATCTA+TGG 0.405622 2_4:-11509327 None:intergenic
TGCATATTTGCTCAGGCAAA+GGG 0.416453 2_4:-11509338 None:intergenic
GTTTCCCAGCTATTGGTTCT+CGG 0.422970 2_4:-11509176 None:intergenic
GCGCGCCAATTCCCGCTAAT+CGG 0.425020 2_4:-11509032 None:intergenic
AGCATCATAGGATGCCATAT+TGG 0.428156 2_4:-11509072 None:intergenic
TCAGGTAAGCCCGGAATTAA+GGG 0.433050 2_4:-11508498 None:intergenic
GAGATTTAACGATAAAGATA+AGG 0.440458 2_4:+11508325 Msa0315290:intron
ATCTATGGCTTCCCAGGAAT+CGG 0.451162 2_4:-11509312 None:intergenic
TTATGTCTCTCCTAGAGGAC+AGG 0.451993 2_4:+11509145 Msa0315290:CDS
AACCACCGCTAACCTAAACT+TGG 0.453592 2_4:-11508421 None:intergenic
CGTGGATTGTCCTCTTGACT+TGG 0.459145 2_4:+11508851 Msa0315290:CDS
TTTGCATATCATAAGTGTAC+TGG 0.463348 2_4:+11508675 Msa0315290:CDS
AAGGACAAGGTTTGTCCTCA+TGG 0.464137 2_4:+11508765 Msa0315290:CDS
ATGATGCTGCAGTTCTGAAC+GGG 0.464281 2_4:+11509087 Msa0315290:CDS
AAATGGGTTTCAAAGATCCT+TGG 0.469304 2_4:+11508643 Msa0315290:CDS
GATTCCTGGGAAGCCATAGA+TGG 0.471496 2_4:+11509314 Msa0315290:CDS
CCTCTTGCAGACAGCCCTAC+AGG 0.472883 2_4:-11508571 None:intergenic
GGGGCCATCTATGGCTTCCC+AGG 0.474200 2_4:-11509318 None:intergenic
ATCTCCCAAGTTTAGGTTAG+CGG 0.477981 2_4:+11508416 Msa0315290:CDS
TACTGGAAAGATTCAATGGC+AGG 0.482203 2_4:+11508692 Msa0315290:CDS
TTGTAACAGAAGGATGGTTA+TGG 0.483194 2_4:+11509117 Msa0315290:CDS
CAATTAAGAGCAACATCATC+AGG 0.483657 2_4:-11508516 None:intergenic
TAGTACTGATCTTTATGAGC+TGG 0.486572 2_4:+11508989 Msa0315290:CDS
ACGATCCGAGAACCAATAGC+TGG 0.496530 2_4:+11509171 Msa0315290:CDS
TTTACTAATAGGAAGCAAAT+GGG 0.500450 2_4:+11508627 Msa0315290:CDS
TTGCATATTTGCTCAGGCAA+AGG 0.504929 2_4:-11509339 None:intergenic
CTTGCAAGGCATTGCAGGGA+TGG 0.507543 2_4:-11508745 None:intergenic
AGCTGGGAAACTATGGCTGT+TGG 0.507613 2_4:+11509188 Msa0315290:CDS
GATGGGATGGTTTATGCAGC+TGG 0.507844 2_4:+11508960 Msa0315290:CDS
CAGGATGAATGACTTTGAAC+CGG 0.508558 2_4:-11508552 None:intergenic
TGCCATATTGGTTCCCATGT+TGG 0.508940 2_4:-11509060 None:intergenic
TGCAATGCCTTGCAAGGACA+AGG 0.510866 2_4:+11508752 Msa0315290:CDS
ATGGGATGGTTTATGCAGCT+GGG 0.512009 2_4:+11508961 Msa0315290:CDS
AGGTATTAGATCCGATTAGC+GGG 0.521082 2_4:+11509021 Msa0315290:CDS
TTGGGAGATAGTGTCATTTG+AGG 0.521340 2_4:-11508402 None:intergenic
AGTGTACTGGAAAGATTCAA+TGG 0.529957 2_4:+11508688 Msa0315290:CDS
GCTCAGAAACAACAAATAAG+TGG 0.537113 2_4:-11509253 None:intergenic
TAACCAGGAAGCCGATTCCT+GGG 0.538113 2_4:+11509301 Msa0315290:CDS
CTTAGAGAATGATCTAACTC+TGG 0.539641 2_4:-11508468 None:intergenic
TTTGCCAGTGGAGTAATCGA+TGG 0.542803 2_4:+11508942 Msa0315290:CDS
CAAGCACCGGTTCACAAGCT+AGG 0.543317 2_4:+11508375 Msa0315290:CDS
TTGCCAGTGGAGTAATCGAT+GGG 0.543911 2_4:+11508943 Msa0315290:CDS
AAGAGGTGGCATATGTTACT+TGG 0.546808 2_4:+11508588 Msa0315290:CDS
GGACTTAGAGAAGGGTGGAC+TGG 0.550423 2_4:+11509209 Msa0315290:CDS
TTGGCGCGCTATTGCCAACA+TGG 0.550527 2_4:+11509046 Msa0315290:CDS
GGATCACCTAGCTTGTGAAC+CGG 0.553072 2_4:-11508381 None:intergenic
GCAACATCATCAGGTAAGCC+CGG 0.556029 2_4:-11508507 None:intergenic
TCAAAGTCATTCATCCTGTA+GGG 0.557607 2_4:+11508557 Msa0315290:CDS
GGATCGTAGACCTGTCCTCT+AGG 0.560032 2_4:-11509155 None:intergenic
CATCCCTGCAATGCCTTGCA+AGG 0.560526 2_4:+11508746 Msa0315290:CDS
GAATGATCTAACTCTGGCAT+CGG 0.561877 2_4:-11508462 None:intergenic
CATCCCATCGATTACTCCAC+TGG 0.564791 2_4:-11508946 None:intergenic
TGTCCTTGCAAGGCATTGCA+GGG 0.566024 2_4:-11508749 None:intergenic
TCTTTACGTATGCGGTGGCA+TGG 0.567533 2_4:+11508821 Msa0315290:CDS
TTCAAAGTCATTCATCCTGT+AGG 0.569327 2_4:+11508556 Msa0315290:CDS
TATGATGCTGCAGTTCTGAA+CGG 0.569619 2_4:+11509086 Msa0315290:CDS
GTAGGGCTGTCTGCAAGAGG+TGG 0.571680 2_4:+11508574 Msa0315290:CDS
ATGGCTGTTGGACTTAGAGA+AGG 0.574595 2_4:+11509200 Msa0315290:CDS
CCTGTAGGGCTGTCTGCAAG+AGG 0.578172 2_4:+11508571 Msa0315290:CDS
CAGTGGAGTAATCGATGGGA+TGG 0.581579 2_4:+11508947 Msa0315290:CDS
TGTTACTTGGTAGTAAAGAG+AGG 0.594306 2_4:+11508601 Msa0315290:CDS
GGACAAACCTTGTCCTTGCA+AGG 0.597418 2_4:-11508759 None:intergenic
TGGGATGGTTTATGCAGCTG+GGG 0.601401 2_4:+11508962 Msa0315290:CDS
TCCCAAGTTTAGGTTAGCGG+TGG 0.605858 2_4:+11508419 Msa0315290:CDS
TTATGAGCTGGATTCAGCTG+AGG 0.606127 2_4:+11509001 Msa0315290:CDS
TATTTCAACACCAAGTCAAG+AGG 0.607388 2_4:-11508861 None:intergenic
CGGTGGCATGGTCTCTGACG+TGG 0.609464 2_4:+11508833 Msa0315290:CDS
GAGGTATTAGATCCGATTAG+CGG 0.618113 2_4:+11509020 Msa0315290:CDS
GGGAAACTGCTTGTAACAGA+AGG 0.619168 2_4:+11509107 Msa0315290:CDS
CGATCCGAGAACCAATAGCT+GGG 0.621734 2_4:+11509172 Msa0315290:CDS
TGGCTGTTGGACTTAGAGAA+GGG 0.623432 2_4:+11509201 Msa0315290:CDS
AACTGCTTGTAACAGAAGGA+TGG 0.627353 2_4:+11509111 Msa0315290:CDS
TGGCGCGCTATTGCCAACAT+GGG 0.632332 2_4:+11509047 Msa0315290:CDS
TGAATCGAATGATCAGTGCT+AGG 0.644133 2_4:+11508913 Msa0315290:CDS
CTGTTGGACTTAGAGAAGGG+TGG 0.655252 2_4:+11509204 Msa0315290:CDS
GGTAATCTTTACGTATGCGG+TGG 0.656082 2_4:+11508816 Msa0315290:CDS
TGTGTTTCGATGCCTCACGA+TGG 0.656289 2_4:+11508795 Msa0315290:CDS
ACCACCGCTAACCTAAACTT+GGG 0.656767 2_4:-11508420 None:intergenic
GCATATTTGCTCAGGCAAAG+GGG 0.660049 2_4:-11509337 None:intergenic
CTAGTAACTCAAAATGCGCG+TGG 0.665345 2_4:+11507371 None:intergenic
ACGTAAAGATTACCATCGTG+AGG 0.668276 2_4:-11508807 None:intergenic
AGGGTGGACTGGTTCAAGCG+TGG 0.672213 2_4:+11509220 Msa0315290:CDS
GGGATGGTTTATGCAGCTGG+GGG 0.673599 2_4:+11508963 Msa0315290:CDS
ACTGATCATTCGATTCATCA+CGG 0.677591 2_4:-11508907 None:intergenic
GGATGGTTTATGCAGCTGGG+GGG 0.678556 2_4:+11508964 Msa0315290:CDS
GATGGTAATCTTTACGTATG+CGG 0.716864 2_4:+11508813 Msa0315290:CDS
GAAACACACCGAAAACCATG+AGG 0.732405 2_4:-11508780 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTTATAGCAAATTAA+AGG - chr2_4:11508118-11508137 None:intergenic 10.0%
!!! TTTTATTGTTTCTTATTAAA+GGG + chr2_4:11508287-11508306 Msa0315290:intron 10.0%
!!! ATTTTTTTATAGCAAATTAA+AGG - chr2_4:11508118-11508137 None:intergenic 10.0%
!!! TTTTATTGTTTCTTATTAAA+GGG + chr2_4:11508287-11508306 Msa0315290:intron 10.0%
!!! ATGATTAATTTTTTGCTAAT+AGG - chr2_4:11507455-11507474 None:intergenic 15.0%
!! AATAAAAATCTCAACTTTAT+AGG - chr2_4:11507797-11507816 None:intergenic 15.0%
!!! GTTTTATTGTTTCTTATTAA+AGG + chr2_4:11508286-11508305 Msa0315290:intron 15.0%
!!! ATGATTAATTTTTTGCTAAT+AGG - chr2_4:11507455-11507474 None:intergenic 15.0%
!! AATAAAAATCTCAACTTTAT+AGG - chr2_4:11507797-11507816 None:intergenic 15.0%
!!! GTTTTATTGTTTCTTATTAA+AGG + chr2_4:11508286-11508305 Msa0315290:intron 15.0%
!! TTAACACATACATAAATTCT+GGG + chr2_4:11507717-11507736 Msa0315290:intron 20.0%
!!! TTTTTATTTGATATTGCTTC+TGG + chr2_4:11507809-11507828 Msa0315290:intron 20.0%
!!! TTTTATTTGATATTGCTTCT+GGG + chr2_4:11507810-11507829 Msa0315290:intron 20.0%
!! ATCAGTTGAATATCTAATAA+GGG + chr2_4:11507995-11508014 Msa0315290:intron 20.0%
!! TTAACACATACATAAATTCT+GGG + chr2_4:11507717-11507736 Msa0315290:intron 20.0%
!!! TTTTTATTTGATATTGCTTC+TGG + chr2_4:11507809-11507828 Msa0315290:intron 20.0%
!!! TTTTATTTGATATTGCTTCT+GGG + chr2_4:11507810-11507829 Msa0315290:intron 20.0%
!! ATCAGTTGAATATCTAATAA+GGG + chr2_4:11507995-11508014 Msa0315290:intron 20.0%
! GTTAACACATACATAAATTC+TGG + chr2_4:11507716-11507735 Msa0315290:intron 25.0%
! TTTATAGGAAAATAACAGTG+AGG - chr2_4:11507782-11507801 None:intergenic 25.0%
! TTTATTTGATATTGCTTCTG+GGG + chr2_4:11507811-11507830 Msa0315290:intron 25.0%
!!! GTGCAAAATTATAGCTTTTT+TGG + chr2_4:11507876-11507895 Msa0315290:intron 25.0%
! GATCAGTTGAATATCTAATA+AGG + chr2_4:11507994-11508013 Msa0315290:intron 25.0%
! TCAGTTGAATATCTAATAAG+GGG + chr2_4:11507996-11508015 Msa0315290:intron 25.0%
!!! TGTTTTATTCTATCTGCTTT+TGG + chr2_4:11508031-11508050 Msa0315290:intron 25.0%
!! TTTTCTCTTTATTGTGGATT+AGG + chr2_4:11508081-11508100 Msa0315290:intron 25.0%
! TATCTCTTGGATTGAAAATT+TGG + chr2_4:11508176-11508195 Msa0315290:intron 25.0%
! TGTTTCTTATTAAAGGGTTT+AGG + chr2_4:11508293-11508312 Msa0315290:intron 25.0%
! GAGATTTAACGATAAAGATA+AGG + chr2_4:11508325-11508344 Msa0315290:intron 25.0%
!!! AAGAGAGGTTTTTTACTAAT+AGG + chr2_4:11508616-11508635 Msa0315290:CDS 25.0%
!! TTTTACTAATAGGAAGCAAA+TGG + chr2_4:11508626-11508645 Msa0315290:CDS 25.0%
! TTTACTAATAGGAAGCAAAT+GGG + chr2_4:11508627-11508646 Msa0315290:CDS 25.0%
! GTTAACACATACATAAATTC+TGG + chr2_4:11507716-11507735 Msa0315290:intron 25.0%
! TTTATAGGAAAATAACAGTG+AGG - chr2_4:11507782-11507801 None:intergenic 25.0%
! TTTATTTGATATTGCTTCTG+GGG + chr2_4:11507811-11507830 Msa0315290:intron 25.0%
!!! GTGCAAAATTATAGCTTTTT+TGG + chr2_4:11507876-11507895 Msa0315290:intron 25.0%
! GATCAGTTGAATATCTAATA+AGG + chr2_4:11507994-11508013 Msa0315290:intron 25.0%
! TCAGTTGAATATCTAATAAG+GGG + chr2_4:11507996-11508015 Msa0315290:intron 25.0%
!!! TGTTTTATTCTATCTGCTTT+TGG + chr2_4:11508031-11508050 Msa0315290:intron 25.0%
!! TTTTCTCTTTATTGTGGATT+AGG + chr2_4:11508081-11508100 Msa0315290:intron 25.0%
! TATCTCTTGGATTGAAAATT+TGG + chr2_4:11508176-11508195 Msa0315290:intron 25.0%
! TGTTTCTTATTAAAGGGTTT+AGG + chr2_4:11508293-11508312 Msa0315290:intron 25.0%
! GAGATTTAACGATAAAGATA+AGG + chr2_4:11508325-11508344 Msa0315290:intron 25.0%
!!! AAGAGAGGTTTTTTACTAAT+AGG + chr2_4:11508616-11508635 Msa0315290:CDS 25.0%
!! TTTTACTAATAGGAAGCAAA+TGG + chr2_4:11508626-11508645 Msa0315290:CDS 25.0%
! TTTACTAATAGGAAGCAAAT+GGG + chr2_4:11508627-11508646 Msa0315290:CDS 25.0%
AGGAAGATTTGATTATTGTG+TGG - chr2_4:11507435-11507454 None:intergenic 30.0%
TTTGTTTGTGAGGAGAAAAA+TGG - chr2_4:11507496-11507515 None:intergenic 30.0%
ACAAAGAAAGAGATAAAGAC+TGG - chr2_4:11507533-11507552 None:intergenic 30.0%
ATGAGATTCAATTCAGTTGA+AGG - chr2_4:11507581-11507600 None:intergenic 30.0%
CTTACAAGAAGCAAATAAAG+TGG - chr2_4:11507620-11507639 None:intergenic 30.0%
CAAAAACACACAAAGAAACA+AGG - chr2_4:11507673-11507692 None:intergenic 30.0%
!!! TTTTTTGGAGACATGTGAAT+TGG + chr2_4:11507839-11507858 Msa0315290:intron 30.0%
!! TTTTTGGAGACATGTGAATT+GGG + chr2_4:11507840-11507859 Msa0315290:intron 30.0%
! TGAATTGGGTTATTTGCTTT+TGG + chr2_4:11507854-11507873 Msa0315290:intron 30.0%
!!! GTGCTTTTTTCTCTTTATTG+TGG + chr2_4:11508075-11508094 Msa0315290:intron 30.0%
!! CTTTATTGTGGATTAGGATT+TGG + chr2_4:11508087-11508106 Msa0315290:intron 30.0%
TGGAATAGATTCTTATCTCT+TGG + chr2_4:11508163-11508182 Msa0315290:intron 30.0%
TATGCAAATACAAAAAGCCA+AGG - chr2_4:11508663-11508682 None:intergenic 30.0%
TTTGCATATCATAAGTGTAC+TGG + chr2_4:11508675-11508694 Msa0315290:CDS 30.0%
!! TTGATCTAACTCACTTTTCT+TGG + chr2_4:11508718-11508737 Msa0315290:CDS 30.0%
!! GAAGCTTAAGTTTTATAACC+AGG + chr2_4:11509286-11509305 Msa0315290:CDS 30.0%
AGGAAGATTTGATTATTGTG+TGG - chr2_4:11507435-11507454 None:intergenic 30.0%
TTTGTTTGTGAGGAGAAAAA+TGG - chr2_4:11507496-11507515 None:intergenic 30.0%
ACAAAGAAAGAGATAAAGAC+TGG - chr2_4:11507533-11507552 None:intergenic 30.0%
ATGAGATTCAATTCAGTTGA+AGG - chr2_4:11507581-11507600 None:intergenic 30.0%
CTTACAAGAAGCAAATAAAG+TGG - chr2_4:11507620-11507639 None:intergenic 30.0%
CAAAAACACACAAAGAAACA+AGG - chr2_4:11507673-11507692 None:intergenic 30.0%
!!! TTTTTTGGAGACATGTGAAT+TGG + chr2_4:11507839-11507858 Msa0315290:intron 30.0%
!! TTTTTGGAGACATGTGAATT+GGG + chr2_4:11507840-11507859 Msa0315290:intron 30.0%
! TGAATTGGGTTATTTGCTTT+TGG + chr2_4:11507854-11507873 Msa0315290:intron 30.0%
!!! GTGCTTTTTTCTCTTTATTG+TGG + chr2_4:11508075-11508094 Msa0315290:intron 30.0%
!! CTTTATTGTGGATTAGGATT+TGG + chr2_4:11508087-11508106 Msa0315290:intron 30.0%
TGGAATAGATTCTTATCTCT+TGG + chr2_4:11508163-11508182 Msa0315290:intron 30.0%
TATGCAAATACAAAAAGCCA+AGG - chr2_4:11508663-11508682 None:intergenic 30.0%
TTTGCATATCATAAGTGTAC+TGG + chr2_4:11508675-11508694 Msa0315290:CDS 30.0%
!! TTGATCTAACTCACTTTTCT+TGG + chr2_4:11508718-11508737 Msa0315290:CDS 30.0%
!! GAAGCTTAAGTTTTATAACC+AGG + chr2_4:11509286-11509305 Msa0315290:CDS 30.0%
AAGCTAGTAGAGCAGATATA+AGG - chr2_4:11507404-11507423 None:intergenic 35.0%
!!! TGAAGACTGTTTTGTTTGTG+AGG - chr2_4:11507506-11507525 None:intergenic 35.0%
AGAAACAAGGTAAAGTGAAG+AGG - chr2_4:11507660-11507679 None:intergenic 35.0%
!! TATCTGCTTTTGGATCATTG+TGG + chr2_4:11508041-11508060 Msa0315290:intron 35.0%
AAATGTGAGTGTATCAGCTT+AGG + chr2_4:11508134-11508153 Msa0315290:intron 35.0%
TGTATCAGCTTAGGAGAATT+TGG + chr2_4:11508143-11508162 Msa0315290:intron 35.0%
CACTATGTTCTCAAATTGGT+TGG - chr2_4:11508228-11508247 None:intergenic 35.0%
CAACCAATTTGAGAACATAG+TGG + chr2_4:11508226-11508245 Msa0315290:intron 35.0%
CTTCCACTATGTTCTCAAAT+TGG - chr2_4:11508232-11508251 None:intergenic 35.0%
CTTAGAGAATGATCTAACTC+TGG - chr2_4:11508471-11508490 None:intergenic 35.0%
AAGAGAAGAACCCTTAATTC+CGG + chr2_4:11508488-11508507 Msa0315290:CDS 35.0%
CAATTAAGAGCAACATCATC+AGG - chr2_4:11508519-11508538 None:intergenic 35.0%
TAATTGTCTTCTTCGTCTTC+CGG + chr2_4:11508533-11508552 Msa0315290:CDS 35.0%
TTCAAAGTCATTCATCCTGT+AGG + chr2_4:11508556-11508575 Msa0315290:CDS 35.0%
TCAAAGTCATTCATCCTGTA+GGG + chr2_4:11508557-11508576 Msa0315290:CDS 35.0%
! TGTTACTTGGTAGTAAAGAG+AGG + chr2_4:11508601-11508620 Msa0315290:CDS 35.0%
! AAATGGGTTTCAAAGATCCT+TGG + chr2_4:11508643-11508662 Msa0315290:CDS 35.0%
AGTGTACTGGAAAGATTCAA+TGG + chr2_4:11508688-11508707 Msa0315290:CDS 35.0%
GATGGTAATCTTTACGTATG+CGG + chr2_4:11508813-11508832 Msa0315290:CDS 35.0%
TATTTCAACACCAAGTCAAG+AGG - chr2_4:11508864-11508883 None:intergenic 35.0%
ATGAGATCACGAAAAATCGT+TGG + chr2_4:11508883-11508902 Msa0315290:CDS 35.0%
ACTGATCATTCGATTCATCA+CGG - chr2_4:11508910-11508929 None:intergenic 35.0%
!! TAGTACTGATCTTTATGAGC+TGG + chr2_4:11508989-11509008 Msa0315290:CDS 35.0%
TTGTAACAGAAGGATGGTTA+TGG + chr2_4:11509117-11509136 Msa0315290:CDS 35.0%
GCTCAGAAACAACAAATAAG+TGG - chr2_4:11509256-11509275 None:intergenic 35.0%
AAGCTAGTAGAGCAGATATA+AGG - chr2_4:11507404-11507423 None:intergenic 35.0%
!!! TGAAGACTGTTTTGTTTGTG+AGG - chr2_4:11507506-11507525 None:intergenic 35.0%
AGAAACAAGGTAAAGTGAAG+AGG - chr2_4:11507660-11507679 None:intergenic 35.0%
!! TATCTGCTTTTGGATCATTG+TGG + chr2_4:11508041-11508060 Msa0315290:intron 35.0%
AAATGTGAGTGTATCAGCTT+AGG + chr2_4:11508134-11508153 Msa0315290:intron 35.0%
TGTATCAGCTTAGGAGAATT+TGG + chr2_4:11508143-11508162 Msa0315290:intron 35.0%
CACTATGTTCTCAAATTGGT+TGG - chr2_4:11508228-11508247 None:intergenic 35.0%
CAACCAATTTGAGAACATAG+TGG + chr2_4:11508226-11508245 Msa0315290:intron 35.0%
CTTCCACTATGTTCTCAAAT+TGG - chr2_4:11508232-11508251 None:intergenic 35.0%
CTTAGAGAATGATCTAACTC+TGG - chr2_4:11508471-11508490 None:intergenic 35.0%
AAGAGAAGAACCCTTAATTC+CGG + chr2_4:11508488-11508507 Msa0315290:CDS 35.0%
CAATTAAGAGCAACATCATC+AGG - chr2_4:11508519-11508538 None:intergenic 35.0%
TAATTGTCTTCTTCGTCTTC+CGG + chr2_4:11508533-11508552 Msa0315290:CDS 35.0%
TTCAAAGTCATTCATCCTGT+AGG + chr2_4:11508556-11508575 Msa0315290:CDS 35.0%
TCAAAGTCATTCATCCTGTA+GGG + chr2_4:11508557-11508576 Msa0315290:CDS 35.0%
! TGTTACTTGGTAGTAAAGAG+AGG + chr2_4:11508601-11508620 Msa0315290:CDS 35.0%
! AAATGGGTTTCAAAGATCCT+TGG + chr2_4:11508643-11508662 Msa0315290:CDS 35.0%
AGTGTACTGGAAAGATTCAA+TGG + chr2_4:11508688-11508707 Msa0315290:CDS 35.0%
GATGGTAATCTTTACGTATG+CGG + chr2_4:11508813-11508832 Msa0315290:CDS 35.0%
TATTTCAACACCAAGTCAAG+AGG - chr2_4:11508864-11508883 None:intergenic 35.0%
ATGAGATCACGAAAAATCGT+TGG + chr2_4:11508883-11508902 Msa0315290:CDS 35.0%
ACTGATCATTCGATTCATCA+CGG - chr2_4:11508910-11508929 None:intergenic 35.0%
!! TAGTACTGATCTTTATGAGC+TGG + chr2_4:11508989-11509008 Msa0315290:CDS 35.0%
TTGTAACAGAAGGATGGTTA+TGG + chr2_4:11509117-11509136 Msa0315290:CDS 35.0%
GCTCAGAAACAACAAATAAG+TGG - chr2_4:11509256-11509275 None:intergenic 35.0%
!! CTAGCTTTTTACGAAGTAGC+AGG + chr2_4:11507928-11507947 Msa0315290:intron 40.0%
! ATTTTCGTCTCAACAAGCAC+CGG + chr2_4:11508362-11508381 Msa0315290:CDS 40.0%
!! TTGGGAGATAGTGTCATTTG+AGG - chr2_4:11508405-11508424 None:intergenic 40.0%
TGACACTATCTCCCAAGTTT+AGG + chr2_4:11508409-11508428 Msa0315290:CDS 40.0%
! ATCTCCCAAGTTTAGGTTAG+CGG + chr2_4:11508416-11508435 Msa0315290:CDS 40.0%
GAATGATCTAACTCTGGCAT+CGG - chr2_4:11508465-11508484 None:intergenic 40.0%
AGAGAAGAACCCTTAATTCC+GGG + chr2_4:11508489-11508508 Msa0315290:CDS 40.0%
CAGGATGAATGACTTTGAAC+CGG - chr2_4:11508555-11508574 None:intergenic 40.0%
AAGAGGTGGCATATGTTACT+TGG + chr2_4:11508588-11508607 Msa0315290:CDS 40.0%
TACTGGAAAGATTCAATGGC+AGG + chr2_4:11508692-11508711 Msa0315290:CDS 40.0%
! AGGTTTGTCCTCATGGTTTT+CGG + chr2_4:11508772-11508791 Msa0315290:CDS 40.0%
ACGTAAAGATTACCATCGTG+AGG - chr2_4:11508810-11508829 None:intergenic 40.0%
TGAATCGAATGATCAGTGCT+AGG + chr2_4:11508913-11508932 Msa0315290:CDS 40.0%
! GAGGTATTAGATCCGATTAG+CGG + chr2_4:11509020-11509039 Msa0315290:CDS 40.0%
AGGTATTAGATCCGATTAGC+GGG + chr2_4:11509021-11509040 Msa0315290:CDS 40.0%
AGCATCATAGGATGCCATAT+TGG - chr2_4:11509075-11509094 None:intergenic 40.0%
!! TATGATGCTGCAGTTCTGAA+CGG + chr2_4:11509086-11509105 Msa0315290:CDS 40.0%
AACTGCTTGTAACAGAAGGA+TGG + chr2_4:11509111-11509130 Msa0315290:CDS 40.0%
! CCTCTAGGAGAGACATAAAA+AGG - chr2_4:11509143-11509162 None:intergenic 40.0%
! CCTTTTTATGTCTCTCCTAG+AGG + chr2_4:11509140-11509159 Msa0315290:CDS 40.0%
AACCAATAGCTGGGAAACTA+TGG + chr2_4:11509181-11509200 Msa0315290:CDS 40.0%
!! CTAGCTTTTTACGAAGTAGC+AGG + chr2_4:11507928-11507947 Msa0315290:intron 40.0%
! ATTTTCGTCTCAACAAGCAC+CGG + chr2_4:11508362-11508381 Msa0315290:CDS 40.0%
!! TTGGGAGATAGTGTCATTTG+AGG - chr2_4:11508405-11508424 None:intergenic 40.0%
TGACACTATCTCCCAAGTTT+AGG + chr2_4:11508409-11508428 Msa0315290:CDS 40.0%
! ATCTCCCAAGTTTAGGTTAG+CGG + chr2_4:11508416-11508435 Msa0315290:CDS 40.0%
GAATGATCTAACTCTGGCAT+CGG - chr2_4:11508465-11508484 None:intergenic 40.0%
AGAGAAGAACCCTTAATTCC+GGG + chr2_4:11508489-11508508 Msa0315290:CDS 40.0%
CAGGATGAATGACTTTGAAC+CGG - chr2_4:11508555-11508574 None:intergenic 40.0%
AAGAGGTGGCATATGTTACT+TGG + chr2_4:11508588-11508607 Msa0315290:CDS 40.0%
TACTGGAAAGATTCAATGGC+AGG + chr2_4:11508692-11508711 Msa0315290:CDS 40.0%
! AGGTTTGTCCTCATGGTTTT+CGG + chr2_4:11508772-11508791 Msa0315290:CDS 40.0%
ACGTAAAGATTACCATCGTG+AGG - chr2_4:11508810-11508829 None:intergenic 40.0%
TGAATCGAATGATCAGTGCT+AGG + chr2_4:11508913-11508932 Msa0315290:CDS 40.0%
! GAGGTATTAGATCCGATTAG+CGG + chr2_4:11509020-11509039 Msa0315290:CDS 40.0%
AGGTATTAGATCCGATTAGC+GGG + chr2_4:11509021-11509040 Msa0315290:CDS 40.0%
AGCATCATAGGATGCCATAT+TGG - chr2_4:11509075-11509094 None:intergenic 40.0%
!! TATGATGCTGCAGTTCTGAA+CGG + chr2_4:11509086-11509105 Msa0315290:CDS 40.0%
AACTGCTTGTAACAGAAGGA+TGG + chr2_4:11509111-11509130 Msa0315290:CDS 40.0%
! CCTCTAGGAGAGACATAAAA+AGG - chr2_4:11509143-11509162 None:intergenic 40.0%
! CCTTTTTATGTCTCTCCTAG+AGG + chr2_4:11509140-11509159 Msa0315290:CDS 40.0%
AACCAATAGCTGGGAAACTA+TGG + chr2_4:11509181-11509200 Msa0315290:CDS 40.0%
!!! GCTTCTGGGGTGTTGTTTTT+TGG + chr2_4:11507824-11507843 Msa0315290:intron 45.0%
!! CTGCTTTTGGATCATTGTGG+AGG + chr2_4:11508044-11508063 Msa0315290:intron 45.0%
! CTTTTGGATCATTGTGGAGG+AGG + chr2_4:11508047-11508066 Msa0315290:intron 45.0%
GATCATTGTGGAGGAGGAAT+TGG + chr2_4:11508053-11508072 Msa0315290:intron 45.0%
ACCACCGCTAACCTAAACTT+GGG - chr2_4:11508423-11508442 None:intergenic 45.0%
AACCACCGCTAACCTAAACT+TGG - chr2_4:11508424-11508443 None:intergenic 45.0%
TCAGGTAAGCCCGGAATTAA+GGG - chr2_4:11508501-11508520 None:intergenic 45.0%
ATCAGGTAAGCCCGGAATTA+AGG - chr2_4:11508502-11508521 None:intergenic 45.0%
AAGGACAAGGTTTGTCCTCA+TGG + chr2_4:11508765-11508784 Msa0315290:CDS 45.0%
GAAACACACCGAAAACCATG+AGG - chr2_4:11508783-11508802 None:intergenic 45.0%
GGTAATCTTTACGTATGCGG+TGG + chr2_4:11508816-11508835 Msa0315290:CDS 45.0%
!!! GCTAGGTCATTTTTTGCCAG+TGG + chr2_4:11508930-11508949 Msa0315290:CDS 45.0%
TTTGCCAGTGGAGTAATCGA+TGG + chr2_4:11508942-11508961 Msa0315290:CDS 45.0%
TTGCCAGTGGAGTAATCGAT+GGG + chr2_4:11508943-11508962 Msa0315290:CDS 45.0%
ATGGGATGGTTTATGCAGCT+GGG + chr2_4:11508961-11508980 Msa0315290:CDS 45.0%
TTATGAGCTGGATTCAGCTG+AGG + chr2_4:11509001-11509020 Msa0315290:CDS 45.0%
TAGATCCGATTAGCGGGAAT+TGG + chr2_4:11509027-11509046 Msa0315290:CDS 45.0%
TGCCAACATGGGAACCAATA+TGG + chr2_4:11509058-11509077 Msa0315290:CDS 45.0%
!! TGCCATATTGGTTCCCATGT+TGG - chr2_4:11509063-11509082 None:intergenic 45.0%
GTTCAGAACTGCAGCATCAT+AGG - chr2_4:11509087-11509106 None:intergenic 45.0%
!! ATGATGCTGCAGTTCTGAAC+GGG + chr2_4:11509087-11509106 Msa0315290:CDS 45.0%
GGGAAACTGCTTGTAACAGA+AGG + chr2_4:11509107-11509126 Msa0315290:CDS 45.0%
TTATGTCTCTCCTAGAGGAC+AGG + chr2_4:11509145-11509164 Msa0315290:CDS 45.0%
!! GTTTCCCAGCTATTGGTTCT+CGG - chr2_4:11509179-11509198 None:intergenic 45.0%
AGCCATAGTTTCCCAGCTAT+TGG - chr2_4:11509186-11509205 None:intergenic 45.0%
ATGGCTGTTGGACTTAGAGA+AGG + chr2_4:11509200-11509219 Msa0315290:CDS 45.0%
TGGCTGTTGGACTTAGAGAA+GGG + chr2_4:11509201-11509220 Msa0315290:CDS 45.0%
GGTTCAAGCGTGGTTGTTTA+TGG + chr2_4:11509230-11509249 Msa0315290:CDS 45.0%
ATCTATGGCTTCCCAGGAAT+CGG - chr2_4:11509315-11509334 None:intergenic 45.0%
!!! GCTTCTGGGGTGTTGTTTTT+TGG + chr2_4:11507824-11507843 Msa0315290:intron 45.0%
!! CTGCTTTTGGATCATTGTGG+AGG + chr2_4:11508044-11508063 Msa0315290:intron 45.0%
! CTTTTGGATCATTGTGGAGG+AGG + chr2_4:11508047-11508066 Msa0315290:intron 45.0%
GATCATTGTGGAGGAGGAAT+TGG + chr2_4:11508053-11508072 Msa0315290:intron 45.0%
ACCACCGCTAACCTAAACTT+GGG - chr2_4:11508423-11508442 None:intergenic 45.0%
AACCACCGCTAACCTAAACT+TGG - chr2_4:11508424-11508443 None:intergenic 45.0%
TCAGGTAAGCCCGGAATTAA+GGG - chr2_4:11508501-11508520 None:intergenic 45.0%
ATCAGGTAAGCCCGGAATTA+AGG - chr2_4:11508502-11508521 None:intergenic 45.0%
AAGGACAAGGTTTGTCCTCA+TGG + chr2_4:11508765-11508784 Msa0315290:CDS 45.0%
GAAACACACCGAAAACCATG+AGG - chr2_4:11508783-11508802 None:intergenic 45.0%
GGTAATCTTTACGTATGCGG+TGG + chr2_4:11508816-11508835 Msa0315290:CDS 45.0%
!!! GCTAGGTCATTTTTTGCCAG+TGG + chr2_4:11508930-11508949 Msa0315290:CDS 45.0%
TTTGCCAGTGGAGTAATCGA+TGG + chr2_4:11508942-11508961 Msa0315290:CDS 45.0%
TTGCCAGTGGAGTAATCGAT+GGG + chr2_4:11508943-11508962 Msa0315290:CDS 45.0%
ATGGGATGGTTTATGCAGCT+GGG + chr2_4:11508961-11508980 Msa0315290:CDS 45.0%
TTATGAGCTGGATTCAGCTG+AGG + chr2_4:11509001-11509020 Msa0315290:CDS 45.0%
TAGATCCGATTAGCGGGAAT+TGG + chr2_4:11509027-11509046 Msa0315290:CDS 45.0%
TGCCAACATGGGAACCAATA+TGG + chr2_4:11509058-11509077 Msa0315290:CDS 45.0%
!! TGCCATATTGGTTCCCATGT+TGG - chr2_4:11509063-11509082 None:intergenic 45.0%
GTTCAGAACTGCAGCATCAT+AGG - chr2_4:11509087-11509106 None:intergenic 45.0%
!! ATGATGCTGCAGTTCTGAAC+GGG + chr2_4:11509087-11509106 Msa0315290:CDS 45.0%
GGGAAACTGCTTGTAACAGA+AGG + chr2_4:11509107-11509126 Msa0315290:CDS 45.0%
TTATGTCTCTCCTAGAGGAC+AGG + chr2_4:11509145-11509164 Msa0315290:CDS 45.0%
!! GTTTCCCAGCTATTGGTTCT+CGG - chr2_4:11509179-11509198 None:intergenic 45.0%
AGCCATAGTTTCCCAGCTAT+TGG - chr2_4:11509186-11509205 None:intergenic 45.0%
ATGGCTGTTGGACTTAGAGA+AGG + chr2_4:11509200-11509219 Msa0315290:CDS 45.0%
TGGCTGTTGGACTTAGAGAA+GGG + chr2_4:11509201-11509220 Msa0315290:CDS 45.0%
GGTTCAAGCGTGGTTGTTTA+TGG + chr2_4:11509230-11509249 Msa0315290:CDS 45.0%
ATCTATGGCTTCCCAGGAAT+CGG - chr2_4:11509315-11509334 None:intergenic 45.0%
! GGATCACCTAGCTTGTGAAC+CGG - chr2_4:11508384-11508403 None:intergenic 50.0%
! TCCCAAGTTTAGGTTAGCGG+TGG + chr2_4:11508419-11508438 Msa0315290:CDS 50.0%
GCAACATCATCAGGTAAGCC+CGG - chr2_4:11508510-11508529 None:intergenic 50.0%
!! TGTCCTTGCAAGGCATTGCA+GGG - chr2_4:11508752-11508771 None:intergenic 50.0%
!! TTGTCCTTGCAAGGCATTGC+AGG - chr2_4:11508753-11508772 None:intergenic 50.0%
TGCAATGCCTTGCAAGGACA+AGG + chr2_4:11508752-11508771 Msa0315290:CDS 50.0%
GGACAAACCTTGTCCTTGCA+AGG - chr2_4:11508762-11508781 None:intergenic 50.0%
TGTGTTTCGATGCCTCACGA+TGG + chr2_4:11508795-11508814 Msa0315290:CDS 50.0%
TCTTTACGTATGCGGTGGCA+TGG + chr2_4:11508821-11508840 Msa0315290:CDS 50.0%
! CGTGGATTGTCCTCTTGACT+TGG + chr2_4:11508851-11508870 Msa0315290:CDS 50.0%
! CATCCCATCGATTACTCCAC+TGG - chr2_4:11508949-11508968 None:intergenic 50.0%
CAGTGGAGTAATCGATGGGA+TGG + chr2_4:11508947-11508966 Msa0315290:CDS 50.0%
GATGGGATGGTTTATGCAGC+TGG + chr2_4:11508960-11508979 Msa0315290:CDS 50.0%
TGGGATGGTTTATGCAGCTG+GGG + chr2_4:11508962-11508981 Msa0315290:CDS 50.0%
ACGATCCGAGAACCAATAGC+TGG + chr2_4:11509171-11509190 Msa0315290:CDS 50.0%
CGATCCGAGAACCAATAGCT+GGG + chr2_4:11509172-11509191 Msa0315290:CDS 50.0%
AGCTGGGAAACTATGGCTGT+TGG + chr2_4:11509188-11509207 Msa0315290:CDS 50.0%
CTGTTGGACTTAGAGAAGGG+TGG + chr2_4:11509204-11509223 Msa0315290:CDS 50.0%
! ATAACCAGGAAGCCGATTCC+TGG + chr2_4:11509300-11509319 Msa0315290:CDS 50.0%
! TAACCAGGAAGCCGATTCCT+GGG + chr2_4:11509301-11509320 Msa0315290:CDS 50.0%
GATTCCTGGGAAGCCATAGA+TGG + chr2_4:11509314-11509333 Msa0315290:CDS 50.0%
! GGATCACCTAGCTTGTGAAC+CGG - chr2_4:11508384-11508403 None:intergenic 50.0%
! TCCCAAGTTTAGGTTAGCGG+TGG + chr2_4:11508419-11508438 Msa0315290:CDS 50.0%
GCAACATCATCAGGTAAGCC+CGG - chr2_4:11508510-11508529 None:intergenic 50.0%
!! TGTCCTTGCAAGGCATTGCA+GGG - chr2_4:11508752-11508771 None:intergenic 50.0%
!! TTGTCCTTGCAAGGCATTGC+AGG - chr2_4:11508753-11508772 None:intergenic 50.0%
TGCAATGCCTTGCAAGGACA+AGG + chr2_4:11508752-11508771 Msa0315290:CDS 50.0%
GGACAAACCTTGTCCTTGCA+AGG - chr2_4:11508762-11508781 None:intergenic 50.0%
TGTGTTTCGATGCCTCACGA+TGG + chr2_4:11508795-11508814 Msa0315290:CDS 50.0%
TCTTTACGTATGCGGTGGCA+TGG + chr2_4:11508821-11508840 Msa0315290:CDS 50.0%
! CGTGGATTGTCCTCTTGACT+TGG + chr2_4:11508851-11508870 Msa0315290:CDS 50.0%
! CATCCCATCGATTACTCCAC+TGG - chr2_4:11508949-11508968 None:intergenic 50.0%
CAGTGGAGTAATCGATGGGA+TGG + chr2_4:11508947-11508966 Msa0315290:CDS 50.0%
GATGGGATGGTTTATGCAGC+TGG + chr2_4:11508960-11508979 Msa0315290:CDS 50.0%
TGGGATGGTTTATGCAGCTG+GGG + chr2_4:11508962-11508981 Msa0315290:CDS 50.0%
ACGATCCGAGAACCAATAGC+TGG + chr2_4:11509171-11509190 Msa0315290:CDS 50.0%
CGATCCGAGAACCAATAGCT+GGG + chr2_4:11509172-11509191 Msa0315290:CDS 50.0%
AGCTGGGAAACTATGGCTGT+TGG + chr2_4:11509188-11509207 Msa0315290:CDS 50.0%
CTGTTGGACTTAGAGAAGGG+TGG + chr2_4:11509204-11509223 Msa0315290:CDS 50.0%
! ATAACCAGGAAGCCGATTCC+TGG + chr2_4:11509300-11509319 Msa0315290:CDS 50.0%
! TAACCAGGAAGCCGATTCCT+GGG + chr2_4:11509301-11509320 Msa0315290:CDS 50.0%
GATTCCTGGGAAGCCATAGA+TGG + chr2_4:11509314-11509333 Msa0315290:CDS 50.0%
!! CAAGCACCGGTTCACAAGCT+AGG + chr2_4:11508375-11508394 Msa0315290:CDS 55.0%
!! CTTGCAAGGCATTGCAGGGA+TGG - chr2_4:11508748-11508767 None:intergenic 55.0%
CATCCCTGCAATGCCTTGCA+AGG + chr2_4:11508746-11508765 Msa0315290:CDS 55.0%
GGGATGGTTTATGCAGCTGG+GGG + chr2_4:11508963-11508982 Msa0315290:CDS 55.0%
GGATGGTTTATGCAGCTGGG+GGG + chr2_4:11508964-11508983 Msa0315290:CDS 55.0%
TTGGCGCGCTATTGCCAACA+TGG + chr2_4:11509046-11509065 Msa0315290:CDS 55.0%
TGGCGCGCTATTGCCAACAT+GGG + chr2_4:11509047-11509066 Msa0315290:CDS 55.0%
GGATCGTAGACCTGTCCTCT+AGG - chr2_4:11509158-11509177 None:intergenic 55.0%
GGACTTAGAGAAGGGTGGAC+TGG + chr2_4:11509209-11509228 Msa0315290:CDS 55.0%
TCAGGCAAAGGGGCCATCTA+TGG - chr2_4:11509330-11509349 None:intergenic 55.0%
!! CAAGCACCGGTTCACAAGCT+AGG + chr2_4:11508375-11508394 Msa0315290:CDS 55.0%
!! CTTGCAAGGCATTGCAGGGA+TGG - chr2_4:11508748-11508767 None:intergenic 55.0%
CATCCCTGCAATGCCTTGCA+AGG + chr2_4:11508746-11508765 Msa0315290:CDS 55.0%
GGGATGGTTTATGCAGCTGG+GGG + chr2_4:11508963-11508982 Msa0315290:CDS 55.0%
GGATGGTTTATGCAGCTGGG+GGG + chr2_4:11508964-11508983 Msa0315290:CDS 55.0%
TTGGCGCGCTATTGCCAACA+TGG + chr2_4:11509046-11509065 Msa0315290:CDS 55.0%
TGGCGCGCTATTGCCAACAT+GGG + chr2_4:11509047-11509066 Msa0315290:CDS 55.0%
GGATCGTAGACCTGTCCTCT+AGG - chr2_4:11509158-11509177 None:intergenic 55.0%
GGACTTAGAGAAGGGTGGAC+TGG + chr2_4:11509209-11509228 Msa0315290:CDS 55.0%
TCAGGCAAAGGGGCCATCTA+TGG - chr2_4:11509330-11509349 None:intergenic 55.0%
CCTCTTGCAGACAGCCCTAC+AGG - chr2_4:11508574-11508593 None:intergenic 60.0%
CCTGTAGGGCTGTCTGCAAG+AGG + chr2_4:11508571-11508590 Msa0315290:CDS 60.0%
GTAGGGCTGTCTGCAAGAGG+TGG + chr2_4:11508574-11508593 Msa0315290:CDS 60.0%
GCGCGCCAATTCCCGCTAAT+CGG - chr2_4:11509035-11509054 None:intergenic 60.0%
!! AGGGTGGACTGGTTCAAGCG+TGG + chr2_4:11509220-11509239 Msa0315290:CDS 60.0%
! CTTCCCAGGAATCGGCTTCC+TGG - chr2_4:11509307-11509326 None:intergenic 60.0%
CCTCTTGCAGACAGCCCTAC+AGG - chr2_4:11508574-11508593 None:intergenic 60.0%
CCTGTAGGGCTGTCTGCAAG+AGG + chr2_4:11508571-11508590 Msa0315290:CDS 60.0%
GTAGGGCTGTCTGCAAGAGG+TGG + chr2_4:11508574-11508593 Msa0315290:CDS 60.0%
GCGCGCCAATTCCCGCTAAT+CGG - chr2_4:11509035-11509054 None:intergenic 60.0%
!! AGGGTGGACTGGTTCAAGCG+TGG + chr2_4:11509220-11509239 Msa0315290:CDS 60.0%
! CTTCCCAGGAATCGGCTTCC+TGG - chr2_4:11509307-11509326 None:intergenic 60.0%
CGGTGGCATGGTCTCTGACG+TGG + chr2_4:11508833-11508852 Msa0315290:CDS 65.0%
GGGGCCATCTATGGCTTCCC+AGG - chr2_4:11509321-11509340 None:intergenic 65.0%
CGGTGGCATGGTCTCTGACG+TGG + chr2_4:11508833-11508852 Msa0315290:CDS 65.0%
GGGGCCATCTATGGCTTCCC+AGG - chr2_4:11509321-11509340 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 11507384 11509349 11507384 ID=Msa0315290;Name=Msa0315290
chr2_4 mRNA 11507384 11509349 11507384 ID=Msa0315290-mRNA-1;Parent=Msa0315290;Name=Msa0315290-mRNA-1;_AED=0.21;_eAED=0.22;_QI=0|0|0|1|0.5|1|3|0|345
chr2_4 exon 11507384 11507392 11507384 ID=Msa0315290-mRNA-1:exon:4431;Parent=Msa0315290-mRNA-1
chr2_4 exon 11508308 11508314 11508308 ID=Msa0315290-mRNA-1:exon:4432;Parent=Msa0315290-mRNA-1
chr2_4 exon 11508328 11509349 11508328 ID=Msa0315290-mRNA-1:exon:4433;Parent=Msa0315290-mRNA-1
chr2_4 CDS 11507384 11507392 11507384 ID=Msa0315290-mRNA-1:cds;Parent=Msa0315290-mRNA-1
chr2_4 CDS 11508308 11508314 11508308 ID=Msa0315290-mRNA-1:cds;Parent=Msa0315290-mRNA-1
chr2_4 CDS 11508328 11509349 11508328 ID=Msa0315290-mRNA-1:cds;Parent=Msa0315290-mRNA-1
Gene Sequence

>Msa0315290

ATGCGCGTGGGTTTAGATTTAACGATAAAGATAAGGATGCAGCGTGTTAGATTTTCGTCTCAACAAGCACCGGTTCACAAGCTAGGTGATCCTCAAATGACACTATCTCCCAAGTTTAGGTTAGCGGTGGTTCAATCTAACTTGACGAGTCCGATGCCAGAGTTAGATCATTCTCTAAGAGAAGAACCCTTAATTCCGGGCTTACCTGATGATGTTGCTCTTAATTGTCTTCTTCGTCTTCCGGTTCAAAGTCATTCATCCTGTAGGGCTGTCTGCAAGAGGTGGCATATGTTACTTGGTAGTAAAGAGAGGTTTTTTACTAATAGGAAGCAAATGGGTTTCAAAGATCCTTGGCTTTTTGTATTTGCATATCATAAGTGTACTGGAAAGATTCAATGGCAGGTTTTTGATCTAACTCACTTTTCTTGGCACACCATCCCTGCAATGCCTTGCAAGGACAAGGTTTGTCCTCATGGTTTTCGGTGTGTTTCGATGCCTCACGATGGTAATCTTTACGTATGCGGTGGCATGGTCTCTGACGTGGATTGTCCTCTTGACTTGGTGTTGAAATATGAGATCACGAAAAATCGTTGGACCGTGATGAATCGAATGATCAGTGCTAGGTCATTTTTTGCCAGTGGAGTAATCGATGGGATGGTTTATGCAGCTGGGGGGAATAGTACTGATCTTTATGAGCTGGATTCAGCTGAGGTATTAGATCCGATTAGCGGGAATTGGCGCGCTATTGCCAACATGGGAACCAATATGGCATCCTATGATGCTGCAGTTCTGAACGGGAAACTGCTTGTAACAGAAGGATGGTTATGGCCTTTTTATGTCTCTCCTAGAGGACAGGTCTACGATCCGAGAACCAATAGCTGGGAAACTATGGCTGTTGGACTTAGAGAAGGGTGGACTGGTTCAAGCGTGGTTGTTTATGGCCACTTATTTGTTGTTTCTGAGCTCGAAAGAATGAAGCTTAAGTTTTATAACCAGGAAGCCGATTCCTGGGAAGCCATAGATGGCCCCTTTGCCTGA

Protein sequence

>Msa0315290

MRVGLDLTIKIRMQRVRFSSQQAPVHKLGDPQMTLSPKFRLAVVQSNLTSPMPELDHSLREEPLIPGLPDDVALNCLLRLPVQSHSSCRAVCKRWHMLLGSKERFFTNRKQMGFKDPWLFVFAYHKCTGKIQWQVFDLTHFSWHTIPAMPCKDKVCPHGFRCVSMPHDGNLYVCGGMVSDVDCPLDLVLKYEITKNRWTVMNRMISARSFFASGVIDGMVYAAGGNSTDLYELDSAEVLDPISGNWRAIANMGTNMASYDAAVLNGKLLVTEGWLWPFYVSPRGQVYDPRTNSWETMAVGLREGWTGSSVVVYGHLFVVSELERMKLKFYNQEADSWEAIDGPFA*