AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0127330

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0127330 MtrunA17_Chr7g0272861 56.512 430 99 12 1 351 1 421 8.53e-142 409
Msa0127330 MtrunA17_Chr1g0191861 97.101 69 2 0 28 96 9 77 9.72e-42 140
Msa0127330 MtrunA17_Chr1g0191871 93.939 66 4 0 101 166 1 66 1.54e-36 126
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0127330 AT3G05330.1 49.072 377 130 10 1 321 1 371 1.24e-99 302

Find 90 sgRNAs with CRISPR-Local

Find 288 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTCTAGTAGAAGAATTTA+AGG 0.103612 1_3:-56579615 Msa0127330:exon
CTATCAAATTCTTTAACTTT+TGG 0.200274 1_3:+56580092 None:intergenic
CCAGGTTAGTTTCACCATTA+AGG 0.232654 1_3:-56579713 Msa0127330:CDS
CCTCTATTTCTTGAAATAAT+AGG 0.242411 1_3:+56579915 None:intergenic
TCACAAGAATACAACAATTA+TGG 0.273565 1_3:+56579547 None:intergenic
ACCAAAAGCAAAACAGGTTT+GGG 0.298728 1_3:-56581386 Msa0127330:five_prime_UTR
AGAAACCTTAAAAGTGATTC+TGG 0.299979 1_3:+56580118 None:intergenic
CCTTAAATTCTTCTACTAGA+AGG 0.318957 1_3:+56579615 None:intergenic
GGGAATTGAACTGTTGATAC+TGG 0.334992 1_3:+56579636 None:intergenic
GTTTCTCCTACAAGCATTGC+AGG 0.339255 1_3:+56580356 None:intergenic
AACCAAAAGCAAAACAGGTT+TGG 0.361926 1_3:-56581387 Msa0127330:five_prime_UTR
AGTATTTGTCTTCGGCGAAT+AGG 0.362928 1_3:-56580058 Msa0127330:CDS
GTATTTGTCTTCGGCGAATA+GGG 0.372487 1_3:-56580057 Msa0127330:CDS
ATCTTGACTTTGGAGTTTGA+TGG 0.378325 1_3:+56579855 None:intergenic
CATTGAGTTGACTTGAACAA+AGG 0.398174 1_3:+56579984 None:intergenic
GGTGGAAACAAGGTTGTGTC+AGG 0.399457 1_3:-56581062 Msa0127330:CDS
GCTAAAGTTCTCTTAAGCTT+TGG 0.399461 1_3:+56581275 None:intergenic
CTCAAACTTGCAAGTCTTGT+GGG 0.400052 1_3:+56579804 None:intergenic
TTAGCCCATGGCCTATTCCT+TGG 0.403064 1_3:+56580029 None:intergenic
TCTGAAACCAAAAGCAAAAC+AGG 0.416963 1_3:-56581392 Msa0127330:five_prime_UTR
GAACTTCAGAACACTGCAAC+TGG 0.423038 1_3:-56581083 Msa0127330:CDS
GTTGACTTGAACAAAGGGTT+GGG 0.423813 1_3:+56579990 None:intergenic
AGTGTTTCTCTAATGAGAAC+AGG 0.433239 1_3:+56581242 None:intergenic
CTTATATTTATACAGGTGAA+TGG 0.441165 1_3:-56580394 Msa0127330:intron
ACACACAACTTAAGTCTAGA+AGG 0.442768 1_3:-56580202 Msa0127330:CDS
AGAGAAATTGTTTCAGCAGT+TGG 0.447693 1_3:-56580299 Msa0127330:CDS
TCGTTGCCTGCAATGCTTGT+AGG 0.448297 1_3:-56580362 Msa0127330:CDS
ATAGGGTATCTCCAAGGAAT+AGG 0.448663 1_3:-56580040 Msa0127330:CDS
AAGTTCTCTTAAGCTTTGGT+GGG 0.451535 1_3:+56581279 None:intergenic
CTCCTTCGAGACTAGCTACC+AGG 0.453794 1_3:-56579731 Msa0127330:CDS
GCTCAAACTTGCAAGTCTTG+TGG 0.454422 1_3:+56579803 None:intergenic
CCTATTATTTCAAGAAATAG+AGG 0.465686 1_3:-56579915 Msa0127330:CDS
CTTAAATTCTTCTACTAGAA+GGG 0.467982 1_3:+56579616 None:intergenic
AAAGTTCTCTTAAGCTTTGG+TGG 0.470882 1_3:+56581278 None:intergenic
AAGCAACAAGTATTTGTCTT+CGG 0.479578 1_3:-56580066 Msa0127330:CDS
AAGAGAAACTGACCTGTGTT+TGG 0.481868 1_3:+56580814 None:intergenic
TTGTTTGGCCTTTGAGACAT+TGG 0.493614 1_3:+56580242 None:intergenic
ATTGAGTTGACTTGAACAAA+GGG 0.497713 1_3:+56579985 None:intergenic
GTTATCTCAAAACTAGTCTC+AGG 0.503294 1_3:-56581010 Msa0127330:CDS
AGTTGACTTGAACAAAGGGT+TGG 0.503335 1_3:+56579989 None:intergenic
AAAAGTGATGGAATTGTAAG+TGG 0.506447 1_3:-56579672 Msa0127330:CDS
CACTGCAACTGGTGGAAACA+AGG 0.518087 1_3:-56581072 Msa0127330:CDS
TGACCTGTGTTTGGCGTAGA+GGG 0.523038 1_3:+56580823 None:intergenic
CCTTAATGGTGAAACTAACC+TGG 0.524129 1_3:+56579713 None:intergenic
ACTTAAGTCTAGAAGGAAGA+AGG 0.529704 1_3:-56580195 Msa0127330:CDS
AGAGACCCACCTTCTGAAGA+TGG 0.530775 1_3:-56581312 Msa0127330:exon
ATGCTTGTAGGAGAAACTCT+TGG 0.537823 1_3:-56580350 Msa0127330:CDS
CGCAACCATCTTCAGAAGGT+GGG 0.539798 1_3:+56581307 None:intergenic
AGTTCTCTTAAGCTTTGGTG+GGG 0.545383 1_3:+56581280 None:intergenic
ATTCTCTGAAGGGTCAAGAA+TGG 0.551911 1_3:-56580877 Msa0127330:intron
CTGACCTGTGTTTGGCGTAG+AGG 0.555004 1_3:+56580822 None:intergenic
TATCTCCAAGGAATAGGCCA+TGG 0.556210 1_3:-56580034 Msa0127330:CDS
ATACAGAACAAAGAATGCTA+TGG 0.559439 1_3:+56579491 None:intergenic
TCTCTCTCTCTAACAGAGAC+GGG 0.559920 1_3:+56581354 None:intergenic
CAAACCGTTACTCATACACT+TGG 0.562775 1_3:-56581460 Msa0127330:five_prime_UTR
AAAACTGCACAGAAAAGTGA+TGG 0.564152 1_3:-56579684 Msa0127330:CDS
ATAGTGACAAAATACAATCA+AGG 0.568852 1_3:+56579583 None:intergenic
ATCTCCAAGGAATAGGCCAT+GGG 0.568882 1_3:-56580033 Msa0127330:CDS
CAAAGAATGCTATGGACACA+AGG 0.572605 1_3:+56579499 None:intergenic
GGAACGAGCTCTTTGAAGTG+AGG 0.574082 1_3:+56580139 None:intergenic
TCGCAACCATCTTCAGAAGG+TGG 0.580488 1_3:+56581306 None:intergenic
CTTCAGAACACTGCAACTGG+TGG 0.586535 1_3:-56581080 Msa0127330:CDS
CTTAGCCCACGAAGTACCAT+AGG 0.588269 1_3:-56581032 Msa0127330:CDS
GAACGAGCTCTTTGAAGTGA+GGG 0.590066 1_3:+56580140 None:intergenic
GGAATTGAACTGTTGATACT+GGG 0.592270 1_3:+56579637 None:intergenic
TTGACTTTGGAGTTTGATGG+TGG 0.594753 1_3:+56579858 None:intergenic
AGATAACCTATGGTACTTCG+TGG 0.597724 1_3:+56581026 None:intergenic
GTGGAAACAAGGTTGTGTCA+GGG 0.603682 1_3:-56581061 Msa0127330:CDS
CTCTAACAGAGACGGGAACA+CGG 0.604510 1_3:+56581361 None:intergenic
TTTGAAGGTGGATCAATGCA+TGG 0.607711 1_3:-56581117 Msa0127330:intron
TTGACTTGAACAAAGGGTTG+GGG 0.609764 1_3:+56579991 None:intergenic
TTCTCGCAACCATCTTCAGA+AGG 0.610122 1_3:+56581303 None:intergenic
GATAACCTATGGTACTTCGT+GGG 0.618590 1_3:+56581027 None:intergenic
TGGAAACAAGGTTGTGTCAG+GGG 0.619960 1_3:-56581060 Msa0127330:CDS
CATTAGAGAAACACTCAACA+AGG 0.623747 1_3:-56581234 Msa0127330:intron
CACACCAAGTGTATGAGTAA+CGG 0.626837 1_3:+56581456 None:intergenic
AGGTGGATCAATGCATGGCT+CGG 0.628242 1_3:-56581112 Msa0127330:CDS
CAAACTAAACTACACAATGA+CGG 0.631209 1_3:-56580167 Msa0127330:CDS
GGGTCAAGAATGGTGCCACA+AGG 0.631810 1_3:-56580867 Msa0127330:CDS
TGCCACAAGGAAATCTCCTG+TGG 0.632439 1_3:-56580854 Msa0127330:CDS
GTAGAGGGAAACTTTCCCAC+AGG 0.636539 1_3:+56580838 None:intergenic
GCCACAAGGAAATCTCCTGT+GGG 0.643915 1_3:-56580853 Msa0127330:CDS
ATATTTATACAGGTGAATGG+AGG 0.648586 1_3:-56580391 Msa0127330:intron
GGTGCAAGCAAGAATCACTC+AGG 0.650537 1_3:-56580989 Msa0127330:intron
AACCTGGTAGCTAGTCTCGA+AGG 0.652302 1_3:+56579729 None:intergenic
TTTCCCTCTACGCCAAACAC+AGG 0.653931 1_3:-56580826 Msa0127330:intron
CGGCGAATAGGGTATCTCCA+AGG 0.666411 1_3:-56580046 Msa0127330:CDS
TCGAAGGAGAGAAAGATCGA+CGG 0.676915 1_3:+56579745 None:intergenic
TCCCACAGGAGATTTCCTTG+TGG 0.705582 1_3:+56580852 None:intergenic
CCAAAAGCAAAACAGGTTTG+GGG 0.721954 1_3:-56581385 Msa0127330:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACAAAAATTAAACTAAAATA+TGG + chr1_3:56579998-56580017 None:intergenic 10.0%
!! ACAAAAATTAAACTAAAATA+TGG + chr1_3:56579998-56580017 None:intergenic 10.0%
!!! TAATGTAAAATGTTTCTTTT+TGG - chr1_3:56579783-56579802 Msa0127330:CDS 15.0%
!!! AATGTAAAATGTTTCTTTTT+GGG - chr1_3:56579784-56579803 Msa0127330:CDS 15.0%
!!! TAATGTAAAATGTTTCTTTT+TGG - chr1_3:56579783-56579802 Msa0127330:CDS 15.0%
!!! AATGTAAAATGTTTCTTTTT+GGG - chr1_3:56579784-56579803 Msa0127330:CDS 15.0%
!!! GAAACATTTTACATTAATCA+AGG + chr1_3:56579779-56579798 None:intergenic 20.0%
!!! GTTTGGAATTAAATTTACTT+CGG + chr1_3:56580145-56580164 None:intergenic 20.0%
!! ATTCACCTGTATAAATATAA+GGG + chr1_3:56580533-56580552 None:intergenic 20.0%
!!! CTATCAAATTCTTTAACTTT+TGG + chr1_3:56580837-56580856 None:intergenic 20.0%
!! CTGTTCAACAAAAAATATAA+AGG - chr1_3:56581459-56581478 Msa0127330:five_prime_UTR 20.0%
!!! GAAACATTTTACATTAATCA+AGG + chr1_3:56579779-56579798 None:intergenic 20.0%
!!! GTTTGGAATTAAATTTACTT+CGG + chr1_3:56580145-56580164 None:intergenic 20.0%
!! ATTCACCTGTATAAATATAA+GGG + chr1_3:56580533-56580552 None:intergenic 20.0%
!!! CTATCAAATTCTTTAACTTT+TGG + chr1_3:56580837-56580856 None:intergenic 20.0%
!! CTGTTCAACAAAAAATATAA+AGG - chr1_3:56581459-56581478 Msa0127330:five_prime_UTR 20.0%
! ATAATGTTCAAGTGAAAGTT+TGG + chr1_3:56580162-56580181 None:intergenic 25.0%
! CACTTGAACATTATTTAACA+TGG - chr1_3:56580168-56580187 Msa0127330:CDS 25.0%
! TGAAATAATTAAGTCGAATG+CGG + chr1_3:56580240-56580259 None:intergenic 25.0%
!! ATTTCATTTTCTCAGATTAC+TGG - chr1_3:56580254-56580273 Msa0127330:CDS 25.0%
!!! CTGGTTTTAAATTGTGATTT+CGG - chr1_3:56580317-56580336 Msa0127330:CDS 25.0%
! TAAGTCAGACACAATTTATA+AGG + chr1_3:56580397-56580416 None:intergenic 25.0%
!! TGTGAGTGTTATTACTTATT+AGG - chr1_3:56580463-56580482 Msa0127330:intron 25.0%
! CATTCACCTGTATAAATATA+AGG + chr1_3:56580534-56580553 None:intergenic 25.0%
! CTTATATTTATACAGGTGAA+TGG - chr1_3:56580532-56580551 Msa0127330:intron 25.0%
!!! TCAAATTCTTTAACTTTTGG+AGG + chr1_3:56580834-56580853 None:intergenic 25.0%
!! CCTCTATTTCTTGAAATAAT+AGG + chr1_3:56581014-56581033 None:intergenic 25.0%
! CCTATTATTTCAAGAAATAG+AGG - chr1_3:56581011-56581030 Msa0127330:CDS 25.0%
! GATTTAATCAAAAACTTGTG+TGG + chr1_3:56581047-56581066 None:intergenic 25.0%
! CTTAAATTCTTCTACTAGAA+GGG + chr1_3:56581313-56581332 None:intergenic 25.0%
! ATAGTGACAAAATACAATCA+AGG + chr1_3:56581346-56581365 None:intergenic 25.0%
!! TTGATTGTATTTTGTCACTA+TGG - chr1_3:56581345-56581364 Msa0127330:five_prime_UTR 25.0%
! TCACAAGAATACAACAATTA+TGG + chr1_3:56581382-56581401 None:intergenic 25.0%
! ATAATGTTCAAGTGAAAGTT+TGG + chr1_3:56580162-56580181 None:intergenic 25.0%
! CACTTGAACATTATTTAACA+TGG - chr1_3:56580168-56580187 Msa0127330:CDS 25.0%
! TGAAATAATTAAGTCGAATG+CGG + chr1_3:56580240-56580259 None:intergenic 25.0%
!! ATTTCATTTTCTCAGATTAC+TGG - chr1_3:56580254-56580273 Msa0127330:CDS 25.0%
!!! CTGGTTTTAAATTGTGATTT+CGG - chr1_3:56580317-56580336 Msa0127330:CDS 25.0%
! TAAGTCAGACACAATTTATA+AGG + chr1_3:56580397-56580416 None:intergenic 25.0%
!! TGTGAGTGTTATTACTTATT+AGG - chr1_3:56580463-56580482 Msa0127330:intron 25.0%
! CATTCACCTGTATAAATATA+AGG + chr1_3:56580534-56580553 None:intergenic 25.0%
! CTTATATTTATACAGGTGAA+TGG - chr1_3:56580532-56580551 Msa0127330:intron 25.0%
!!! TCAAATTCTTTAACTTTTGG+AGG + chr1_3:56580834-56580853 None:intergenic 25.0%
!! CCTCTATTTCTTGAAATAAT+AGG + chr1_3:56581014-56581033 None:intergenic 25.0%
! CCTATTATTTCAAGAAATAG+AGG - chr1_3:56581011-56581030 Msa0127330:CDS 25.0%
! GATTTAATCAAAAACTTGTG+TGG + chr1_3:56581047-56581066 None:intergenic 25.0%
! CTTAAATTCTTCTACTAGAA+GGG + chr1_3:56581313-56581332 None:intergenic 25.0%
! ATAGTGACAAAATACAATCA+AGG + chr1_3:56581346-56581365 None:intergenic 25.0%
!! TTGATTGTATTTTGTCACTA+TGG - chr1_3:56581345-56581364 Msa0127330:five_prime_UTR 25.0%
! TCACAAGAATACAACAATTA+TGG + chr1_3:56581382-56581401 None:intergenic 25.0%
!!! ACTAGTTTTGAGATAACCTA+TGG + chr1_3:56579913-56579932 None:intergenic 30.0%
!!! GGTACTTTTTCTTTTCTTCA+TGG - chr1_3:56579958-56579977 Msa0127330:CDS 30.0%
! TTTTGTTACCATTCTCTGAA+GGG - chr1_3:56580039-56580058 Msa0127330:CDS 30.0%
GTATAAATATAAGGGTTCAC+AGG + chr1_3:56580525-56580544 None:intergenic 30.0%
GTGAACCCTTATATTTATAC+AGG - chr1_3:56580525-56580544 Msa0127330:intron 30.0%
ATATTTATACAGGTGAATGG+AGG - chr1_3:56580535-56580554 Msa0127330:intron 30.0%
! AACTCTTGGAGAAATTTTAC+AGG - chr1_3:56580590-56580609 Msa0127330:intron 30.0%
!! TTTGAGACATTGGTGTTTTT+GGG + chr1_3:56580677-56580696 None:intergenic 30.0%
!! TCGAGGTTTATTTTCTTGTT+TGG + chr1_3:56580702-56580721 None:intergenic 30.0%
CAAACTAAACTACACAATGA+CGG - chr1_3:56580759-56580778 Msa0127330:intron 30.0%
AGAAACCTTAAAAGTGATTC+TGG + chr1_3:56580811-56580830 None:intergenic 30.0%
AAGCAACAAGTATTTGTCTT+CGG - chr1_3:56580860-56580879 Msa0127330:CDS 30.0%
!! ATTGAGTTGACTTGAACAAA+GGG + chr1_3:56580944-56580963 None:intergenic 30.0%
! AAAAGTGATGGAATTGTAAG+TGG - chr1_3:56581254-56581273 Msa0127330:CDS 30.0%
CCTTAAATTCTTCTACTAGA+AGG + chr1_3:56581314-56581333 None:intergenic 30.0%
CCTTCTAGTAGAAGAATTTA+AGG - chr1_3:56581311-56581330 Msa0127330:exon 30.0%
ATACAGAACAAAGAATGCTA+TGG + chr1_3:56581438-56581457 None:intergenic 30.0%
!!! ACTAGTTTTGAGATAACCTA+TGG + chr1_3:56579913-56579932 None:intergenic 30.0%
!!! GGTACTTTTTCTTTTCTTCA+TGG - chr1_3:56579958-56579977 Msa0127330:CDS 30.0%
! TTTTGTTACCATTCTCTGAA+GGG - chr1_3:56580039-56580058 Msa0127330:CDS 30.0%
GTATAAATATAAGGGTTCAC+AGG + chr1_3:56580525-56580544 None:intergenic 30.0%
GTGAACCCTTATATTTATAC+AGG - chr1_3:56580525-56580544 Msa0127330:intron 30.0%
ATATTTATACAGGTGAATGG+AGG - chr1_3:56580535-56580554 Msa0127330:intron 30.0%
! AACTCTTGGAGAAATTTTAC+AGG - chr1_3:56580590-56580609 Msa0127330:intron 30.0%
!! TTTGAGACATTGGTGTTTTT+GGG + chr1_3:56580677-56580696 None:intergenic 30.0%
!! TCGAGGTTTATTTTCTTGTT+TGG + chr1_3:56580702-56580721 None:intergenic 30.0%
CAAACTAAACTACACAATGA+CGG - chr1_3:56580759-56580778 Msa0127330:intron 30.0%
AGAAACCTTAAAAGTGATTC+TGG + chr1_3:56580811-56580830 None:intergenic 30.0%
AAGCAACAAGTATTTGTCTT+CGG - chr1_3:56580860-56580879 Msa0127330:CDS 30.0%
!! ATTGAGTTGACTTGAACAAA+GGG + chr1_3:56580944-56580963 None:intergenic 30.0%
! AAAAGTGATGGAATTGTAAG+TGG - chr1_3:56581254-56581273 Msa0127330:CDS 30.0%
CCTTAAATTCTTCTACTAGA+AGG + chr1_3:56581314-56581333 None:intergenic 30.0%
CCTTCTAGTAGAAGAATTTA+AGG - chr1_3:56581311-56581330 Msa0127330:exon 30.0%
ATACAGAACAAAGAATGCTA+TGG + chr1_3:56581438-56581457 None:intergenic 30.0%
!! GAGTAACGGTTTGTTTTCAA+CGG + chr1_3:56579459-56579478 None:intergenic 35.0%
!!! TTGCTTTTGGTTTCAGAGTT+TGG + chr1_3:56579531-56579550 None:intergenic 35.0%
! TCTGAAACCAAAAGCAAAAC+AGG - chr1_3:56579534-56579553 Msa0127330:three_prime_UTR 35.0%
AACCAAAAGCAAAACAGGTT+TGG - chr1_3:56579539-56579558 Msa0127330:three_prime_UTR 35.0%
ACCAAAAGCAAAACAGGTTT+GGG - chr1_3:56579540-56579559 Msa0127330:three_prime_UTR 35.0%
! AAGTTCTCTTAAGCTTTGGT+GGG + chr1_3:56579650-56579669 None:intergenic 35.0%
! AAAGTTCTCTTAAGCTTTGG+TGG + chr1_3:56579651-56579670 None:intergenic 35.0%
GCTAAAGTTCTCTTAAGCTT+TGG + chr1_3:56579654-56579673 None:intergenic 35.0%
AGTGTTTCTCTAATGAGAAC+AGG + chr1_3:56579687-56579706 None:intergenic 35.0%
CATTAGAGAAACACTCAACA+AGG - chr1_3:56579692-56579711 Msa0127330:CDS 35.0%
!!! GTTTCTTTTTGGGTCTTTGA+AGG - chr1_3:56579794-56579813 Msa0127330:CDS 35.0%
! GTTATCTCAAAACTAGTCTC+AGG - chr1_3:56579916-56579935 Msa0127330:CDS 35.0%
!! GTTTTGTTACCATTCTCTGA+AGG - chr1_3:56580038-56580057 Msa0127330:CDS 35.0%
CTTCTAATCGAAGATGTGTA+AGG - chr1_3:56580194-56580213 Msa0127330:CDS 35.0%
AGAGAAATTGTTTCAGCAGT+TGG - chr1_3:56580627-56580646 Msa0127330:intron 35.0%
!!! CTTTGAGACATTGGTGTTTT+TGG + chr1_3:56580678-56580697 None:intergenic 35.0%
CAAAAACACCAATGTCTCAA+AGG - chr1_3:56580676-56580695 Msa0127330:intron 35.0%
!! ACTTAAGTTGTGTGTTTTCG+AGG + chr1_3:56580719-56580738 None:intergenic 35.0%
ACACACAACTTAAGTCTAGA+AGG - chr1_3:56580724-56580743 Msa0127330:intron 35.0%
ACTTAAGTCTAGAAGGAAGA+AGG - chr1_3:56580731-56580750 Msa0127330:intron 35.0%
!! TCGTTCCAGAATCACTTTTA+AGG - chr1_3:56580803-56580822 Msa0127330:intron 35.0%
!!! AGTACAGTTTTTTTAGCCCA+TGG + chr1_3:56580912-56580931 None:intergenic 35.0%
!! CATTGAGTTGACTTGAACAA+AGG + chr1_3:56580945-56580964 None:intergenic 35.0%
! AACAGCAGTTTTGCAAAACA+AGG - chr1_3:56580985-56581004 Msa0127330:intron 35.0%
!! AAAAACTTGTGTGGTGTTGT+TGG + chr1_3:56581038-56581057 None:intergenic 35.0%
!! ATCTTGACTTTGGAGTTTGA+TGG + chr1_3:56581074-56581093 None:intergenic 35.0%
! AGTGCTTTTGATCTTGACTT+TGG + chr1_3:56581084-56581103 None:intergenic 35.0%
AAAACTGCACAGAAAAGTGA+TGG - chr1_3:56581242-56581261 Msa0127330:CDS 35.0%
GGAATTGAACTGTTGATACT+GGG + chr1_3:56581292-56581311 None:intergenic 35.0%
!!! GTGAGATTTTGTTGTTGTTG+AGG - chr1_3:56581398-56581417 Msa0127330:five_prime_UTR 35.0%
!! GAGTAACGGTTTGTTTTCAA+CGG + chr1_3:56579459-56579478 None:intergenic 35.0%
!!! TTGCTTTTGGTTTCAGAGTT+TGG + chr1_3:56579531-56579550 None:intergenic 35.0%
! TCTGAAACCAAAAGCAAAAC+AGG - chr1_3:56579534-56579553 Msa0127330:three_prime_UTR 35.0%
AACCAAAAGCAAAACAGGTT+TGG - chr1_3:56579539-56579558 Msa0127330:three_prime_UTR 35.0%
ACCAAAAGCAAAACAGGTTT+GGG - chr1_3:56579540-56579559 Msa0127330:three_prime_UTR 35.0%
! AAGTTCTCTTAAGCTTTGGT+GGG + chr1_3:56579650-56579669 None:intergenic 35.0%
! AAAGTTCTCTTAAGCTTTGG+TGG + chr1_3:56579651-56579670 None:intergenic 35.0%
GCTAAAGTTCTCTTAAGCTT+TGG + chr1_3:56579654-56579673 None:intergenic 35.0%
AGTGTTTCTCTAATGAGAAC+AGG + chr1_3:56579687-56579706 None:intergenic 35.0%
CATTAGAGAAACACTCAACA+AGG - chr1_3:56579692-56579711 Msa0127330:CDS 35.0%
!!! GTTTCTTTTTGGGTCTTTGA+AGG - chr1_3:56579794-56579813 Msa0127330:CDS 35.0%
! GTTATCTCAAAACTAGTCTC+AGG - chr1_3:56579916-56579935 Msa0127330:CDS 35.0%
!! GTTTTGTTACCATTCTCTGA+AGG - chr1_3:56580038-56580057 Msa0127330:CDS 35.0%
CTTCTAATCGAAGATGTGTA+AGG - chr1_3:56580194-56580213 Msa0127330:CDS 35.0%
AGAGAAATTGTTTCAGCAGT+TGG - chr1_3:56580627-56580646 Msa0127330:intron 35.0%
!!! CTTTGAGACATTGGTGTTTT+TGG + chr1_3:56580678-56580697 None:intergenic 35.0%
CAAAAACACCAATGTCTCAA+AGG - chr1_3:56580676-56580695 Msa0127330:intron 35.0%
!! ACTTAAGTTGTGTGTTTTCG+AGG + chr1_3:56580719-56580738 None:intergenic 35.0%
ACACACAACTTAAGTCTAGA+AGG - chr1_3:56580724-56580743 Msa0127330:intron 35.0%
ACTTAAGTCTAGAAGGAAGA+AGG - chr1_3:56580731-56580750 Msa0127330:intron 35.0%
!! TCGTTCCAGAATCACTTTTA+AGG - chr1_3:56580803-56580822 Msa0127330:intron 35.0%
!!! AGTACAGTTTTTTTAGCCCA+TGG + chr1_3:56580912-56580931 None:intergenic 35.0%
!! CATTGAGTTGACTTGAACAA+AGG + chr1_3:56580945-56580964 None:intergenic 35.0%
! AACAGCAGTTTTGCAAAACA+AGG - chr1_3:56580985-56581004 Msa0127330:intron 35.0%
!! AAAAACTTGTGTGGTGTTGT+TGG + chr1_3:56581038-56581057 None:intergenic 35.0%
!! ATCTTGACTTTGGAGTTTGA+TGG + chr1_3:56581074-56581093 None:intergenic 35.0%
! AGTGCTTTTGATCTTGACTT+TGG + chr1_3:56581084-56581103 None:intergenic 35.0%
AAAACTGCACAGAAAAGTGA+TGG - chr1_3:56581242-56581261 Msa0127330:CDS 35.0%
GGAATTGAACTGTTGATACT+GGG + chr1_3:56581292-56581311 None:intergenic 35.0%
!!! GTGAGATTTTGTTGTTGTTG+AGG - chr1_3:56581398-56581417 Msa0127330:five_prime_UTR 35.0%
!! AACGGTTTGTTTTCAACGGT+CGG + chr1_3:56579455-56579474 None:intergenic 40.0%
CAAACCGTTACTCATACACT+TGG - chr1_3:56579466-56579485 Msa0127330:three_prime_UTR 40.0%
CACACCAAGTGTATGAGTAA+CGG + chr1_3:56579473-56579492 None:intergenic 40.0%
CCAAAAGCAAAACAGGTTTG+GGG - chr1_3:56579541-56579560 Msa0127330:three_prime_UTR 40.0%
! AGTTCTCTTAAGCTTTGGTG+GGG + chr1_3:56579649-56579668 None:intergenic 40.0%
!!! TCTTTTTGGGTCTTTGAAGG+TGG - chr1_3:56579797-56579816 Msa0127330:CDS 40.0%
TTTGAAGGTGGATCAATGCA+TGG - chr1_3:56579809-56579828 Msa0127330:CDS 40.0%
GATAACCTATGGTACTTCGT+GGG + chr1_3:56579902-56579921 None:intergenic 40.0%
AGATAACCTATGGTACTTCG+TGG + chr1_3:56579903-56579922 None:intergenic 40.0%
ATTCTTGACCCTTCAGAGAA+TGG + chr1_3:56580050-56580069 None:intergenic 40.0%
! ATTCTCTGAAGGGTCAAGAA+TGG - chr1_3:56580049-56580068 Msa0127330:CDS 40.0%
AAGAGAAACTGACCTGTGTT+TGG + chr1_3:56580115-56580134 None:intergenic 40.0%
! GGTGCTTCATAGTCTTAATC+TGG - chr1_3:56580298-56580317 Msa0127330:CDS 40.0%
ATAAGGGTTCACAGGTGAAT+AGG + chr1_3:56580517-56580536 None:intergenic 40.0%
ATGCTTGTAGGAGAAACTCT+TGG - chr1_3:56580576-56580595 Msa0127330:intron 40.0%
!!! GTTTTTGGGTCATCTTTGGA+GGG + chr1_3:56580663-56580682 None:intergenic 40.0%
!!! TGTTTTTGGGTCATCTTTGG+AGG + chr1_3:56580664-56580683 None:intergenic 40.0%
!!! TGGTGTTTTTGGGTCATCTT+TGG + chr1_3:56580667-56580686 None:intergenic 40.0%
!! TTGTTTGGCCTTTGAGACAT+TGG + chr1_3:56580687-56580706 None:intergenic 40.0%
AGTATTTGTCTTCGGCGAAT+AGG - chr1_3:56580868-56580887 Msa0127330:CDS 40.0%
GTATTTGTCTTCGGCGAATA+GGG - chr1_3:56580869-56580888 Msa0127330:CDS 40.0%
! ATAGGGTATCTCCAAGGAAT+AGG - chr1_3:56580886-56580905 Msa0127330:intron 40.0%
! TTGACTTGAACAAAGGGTTG+GGG + chr1_3:56580938-56580957 None:intergenic 40.0%
!! GTTGACTTGAACAAAGGGTT+GGG + chr1_3:56580939-56580958 None:intergenic 40.0%
!! AGTTGACTTGAACAAAGGGT+TGG + chr1_3:56580940-56580959 None:intergenic 40.0%
!! TTGACTTTGGAGTTTGATGG+TGG + chr1_3:56581071-56581090 None:intergenic 40.0%
! CTCAAACTTGCAAGTCTTGT+GGG + chr1_3:56581125-56581144 None:intergenic 40.0%
TTCTCCAAAAAGATCGACTG+CGG - chr1_3:56581151-56581170 Msa0127330:intron 40.0%
CCTTAATGGTGAAACTAACC+TGG + chr1_3:56581216-56581235 None:intergenic 40.0%
!! CCAGGTTAGTTTCACCATTA+AGG - chr1_3:56581213-56581232 Msa0127330:intron 40.0%
! GCAGTTTTCTTGCTCCTTAA+TGG + chr1_3:56581230-56581249 None:intergenic 40.0%
GGGAATTGAACTGTTGATAC+TGG + chr1_3:56581293-56581312 None:intergenic 40.0%
CAAAGAATGCTATGGACACA+AGG + chr1_3:56581430-56581449 None:intergenic 40.0%
!! AACGGTTTGTTTTCAACGGT+CGG + chr1_3:56579455-56579474 None:intergenic 40.0%
CAAACCGTTACTCATACACT+TGG - chr1_3:56579466-56579485 Msa0127330:three_prime_UTR 40.0%
CACACCAAGTGTATGAGTAA+CGG + chr1_3:56579473-56579492 None:intergenic 40.0%
CCAAAAGCAAAACAGGTTTG+GGG - chr1_3:56579541-56579560 Msa0127330:three_prime_UTR 40.0%
! AGTTCTCTTAAGCTTTGGTG+GGG + chr1_3:56579649-56579668 None:intergenic 40.0%
!!! TCTTTTTGGGTCTTTGAAGG+TGG - chr1_3:56579797-56579816 Msa0127330:CDS 40.0%
TTTGAAGGTGGATCAATGCA+TGG - chr1_3:56579809-56579828 Msa0127330:CDS 40.0%
GATAACCTATGGTACTTCGT+GGG + chr1_3:56579902-56579921 None:intergenic 40.0%
AGATAACCTATGGTACTTCG+TGG + chr1_3:56579903-56579922 None:intergenic 40.0%
ATTCTTGACCCTTCAGAGAA+TGG + chr1_3:56580050-56580069 None:intergenic 40.0%
! ATTCTCTGAAGGGTCAAGAA+TGG - chr1_3:56580049-56580068 Msa0127330:CDS 40.0%
AAGAGAAACTGACCTGTGTT+TGG + chr1_3:56580115-56580134 None:intergenic 40.0%
! GGTGCTTCATAGTCTTAATC+TGG - chr1_3:56580298-56580317 Msa0127330:CDS 40.0%
ATAAGGGTTCACAGGTGAAT+AGG + chr1_3:56580517-56580536 None:intergenic 40.0%
ATGCTTGTAGGAGAAACTCT+TGG - chr1_3:56580576-56580595 Msa0127330:intron 40.0%
!!! GTTTTTGGGTCATCTTTGGA+GGG + chr1_3:56580663-56580682 None:intergenic 40.0%
!!! TGTTTTTGGGTCATCTTTGG+AGG + chr1_3:56580664-56580683 None:intergenic 40.0%
!!! TGGTGTTTTTGGGTCATCTT+TGG + chr1_3:56580667-56580686 None:intergenic 40.0%
!! TTGTTTGGCCTTTGAGACAT+TGG + chr1_3:56580687-56580706 None:intergenic 40.0%
AGTATTTGTCTTCGGCGAAT+AGG - chr1_3:56580868-56580887 Msa0127330:CDS 40.0%
GTATTTGTCTTCGGCGAATA+GGG - chr1_3:56580869-56580888 Msa0127330:CDS 40.0%
! ATAGGGTATCTCCAAGGAAT+AGG - chr1_3:56580886-56580905 Msa0127330:intron 40.0%
! TTGACTTGAACAAAGGGTTG+GGG + chr1_3:56580938-56580957 None:intergenic 40.0%
!! GTTGACTTGAACAAAGGGTT+GGG + chr1_3:56580939-56580958 None:intergenic 40.0%
!! AGTTGACTTGAACAAAGGGT+TGG + chr1_3:56580940-56580959 None:intergenic 40.0%
!! TTGACTTTGGAGTTTGATGG+TGG + chr1_3:56581071-56581090 None:intergenic 40.0%
! CTCAAACTTGCAAGTCTTGT+GGG + chr1_3:56581125-56581144 None:intergenic 40.0%
TTCTCCAAAAAGATCGACTG+CGG - chr1_3:56581151-56581170 Msa0127330:intron 40.0%
CCTTAATGGTGAAACTAACC+TGG + chr1_3:56581216-56581235 None:intergenic 40.0%
!! CCAGGTTAGTTTCACCATTA+AGG - chr1_3:56581213-56581232 Msa0127330:intron 40.0%
! GCAGTTTTCTTGCTCCTTAA+TGG + chr1_3:56581230-56581249 None:intergenic 40.0%
GGGAATTGAACTGTTGATAC+TGG + chr1_3:56581293-56581312 None:intergenic 40.0%
CAAAGAATGCTATGGACACA+AGG + chr1_3:56581430-56581449 None:intergenic 40.0%
! CCCCAAACCTGTTTTGCTTT+TGG + chr1_3:56579544-56579563 None:intergenic 45.0%
TCTCTCTCTCTAACAGAGAC+GGG + chr1_3:56579575-56579594 None:intergenic 45.0%
CTCTCTCTCTCTAACAGAGA+CGG + chr1_3:56579576-56579595 None:intergenic 45.0%
TTCTCGCAACCATCTTCAGA+AGG + chr1_3:56579626-56579645 None:intergenic 45.0%
GAACTTCAGAACACTGCAAC+TGG - chr1_3:56579843-56579862 Msa0127330:CDS 45.0%
GTGGAAACAAGGTTGTGTCA+GGG - chr1_3:56579865-56579884 Msa0127330:CDS 45.0%
TGGAAACAAGGTTGTGTCAG+GGG - chr1_3:56579866-56579885 Msa0127330:CDS 45.0%
TGTCGATGTTGTGTCTGTGT+TGG - chr1_3:56580277-56580296 Msa0127330:CDS 45.0%
! GTTTCTCCTACAAGCATTGC+AGG + chr1_3:56580573-56580592 None:intergenic 45.0%
!! GAACGAGCTCTTTGAAGTGA+GGG + chr1_3:56580789-56580808 None:intergenic 45.0%
TATCTCCAAGGAATAGGCCA+TGG - chr1_3:56580892-56580911 Msa0127330:intron 45.0%
ATCTCCAAGGAATAGGCCAT+GGG - chr1_3:56580893-56580912 Msa0127330:intron 45.0%
GCTCAAACTTGCAAGTCTTG+TGG + chr1_3:56581126-56581145 None:intergenic 45.0%
! TTAGCCGCAGTCGATCTTTT+TGG + chr1_3:56581158-56581177 None:intergenic 45.0%
TCGAAGGAGAGAAAGATCGA+CGG + chr1_3:56581184-56581203 None:intergenic 45.0%
! CCCCAAACCTGTTTTGCTTT+TGG + chr1_3:56579544-56579563 None:intergenic 45.0%
TCTCTCTCTCTAACAGAGAC+GGG + chr1_3:56579575-56579594 None:intergenic 45.0%
CTCTCTCTCTCTAACAGAGA+CGG + chr1_3:56579576-56579595 None:intergenic 45.0%
TTCTCGCAACCATCTTCAGA+AGG + chr1_3:56579626-56579645 None:intergenic 45.0%
GAACTTCAGAACACTGCAAC+TGG - chr1_3:56579843-56579862 Msa0127330:CDS 45.0%
GTGGAAACAAGGTTGTGTCA+GGG - chr1_3:56579865-56579884 Msa0127330:CDS 45.0%
TGGAAACAAGGTTGTGTCAG+GGG - chr1_3:56579866-56579885 Msa0127330:CDS 45.0%
TGTCGATGTTGTGTCTGTGT+TGG - chr1_3:56580277-56580296 Msa0127330:CDS 45.0%
! GTTTCTCCTACAAGCATTGC+AGG + chr1_3:56580573-56580592 None:intergenic 45.0%
!! GAACGAGCTCTTTGAAGTGA+GGG + chr1_3:56580789-56580808 None:intergenic 45.0%
TATCTCCAAGGAATAGGCCA+TGG - chr1_3:56580892-56580911 Msa0127330:intron 45.0%
ATCTCCAAGGAATAGGCCAT+GGG - chr1_3:56580893-56580912 Msa0127330:intron 45.0%
GCTCAAACTTGCAAGTCTTG+TGG + chr1_3:56581126-56581145 None:intergenic 45.0%
! TTAGCCGCAGTCGATCTTTT+TGG + chr1_3:56581158-56581177 None:intergenic 45.0%
TCGAAGGAGAGAAAGATCGA+CGG + chr1_3:56581184-56581203 None:intergenic 45.0%
CTCTAACAGAGACGGGAACA+CGG + chr1_3:56579568-56579587 None:intergenic 50.0%
! AGAGACCCACCTTCTGAAGA+TGG - chr1_3:56579614-56579633 Msa0127330:exon 50.0%
CGCAACCATCTTCAGAAGGT+GGG + chr1_3:56579622-56579641 None:intergenic 50.0%
TCGCAACCATCTTCAGAAGG+TGG + chr1_3:56579623-56579642 None:intergenic 50.0%
AGGTGGATCAATGCATGGCT+CGG - chr1_3:56579814-56579833 Msa0127330:CDS 50.0%
CTTCAGAACACTGCAACTGG+TGG - chr1_3:56579846-56579865 Msa0127330:CDS 50.0%
CACTGCAACTGGTGGAAACA+AGG - chr1_3:56579854-56579873 Msa0127330:CDS 50.0%
GGTGGAAACAAGGTTGTGTC+AGG - chr1_3:56579864-56579883 Msa0127330:CDS 50.0%
! CTTAGCCCACGAAGTACCAT+AGG - chr1_3:56579894-56579913 Msa0127330:CDS 50.0%
GGTGCAAGCAAGAATCACTC+AGG - chr1_3:56579937-56579956 Msa0127330:CDS 50.0%
TGCCACAAGGAAATCTCCTG+TGG - chr1_3:56580072-56580091 Msa0127330:CDS 50.0%
GCCACAAGGAAATCTCCTGT+GGG - chr1_3:56580073-56580092 Msa0127330:CDS 50.0%
TCCCACAGGAGATTTCCTTG+TGG + chr1_3:56580077-56580096 None:intergenic 50.0%
GTAGAGGGAAACTTTCCCAC+AGG + chr1_3:56580091-56580110 None:intergenic 50.0%
TTTCCCTCTACGCCAAACAC+AGG - chr1_3:56580100-56580119 Msa0127330:CDS 50.0%
TGACCTGTGTTTGGCGTAGA+GGG + chr1_3:56580106-56580125 None:intergenic 50.0%
TCGTTGCCTGCAATGCTTGT+AGG - chr1_3:56580564-56580583 Msa0127330:intron 50.0%
!! GGAACGAGCTCTTTGAAGTG+AGG + chr1_3:56580790-56580809 None:intergenic 50.0%
TTAGCCCATGGCCTATTCCT+TGG + chr1_3:56580900-56580919 None:intergenic 50.0%
! AACCTGGTAGCTAGTCTCGA+AGG + chr1_3:56581200-56581219 None:intergenic 50.0%
CTCTAACAGAGACGGGAACA+CGG + chr1_3:56579568-56579587 None:intergenic 50.0%
! AGAGACCCACCTTCTGAAGA+TGG - chr1_3:56579614-56579633 Msa0127330:exon 50.0%
CGCAACCATCTTCAGAAGGT+GGG + chr1_3:56579622-56579641 None:intergenic 50.0%
TCGCAACCATCTTCAGAAGG+TGG + chr1_3:56579623-56579642 None:intergenic 50.0%
AGGTGGATCAATGCATGGCT+CGG - chr1_3:56579814-56579833 Msa0127330:CDS 50.0%
CTTCAGAACACTGCAACTGG+TGG - chr1_3:56579846-56579865 Msa0127330:CDS 50.0%
CACTGCAACTGGTGGAAACA+AGG - chr1_3:56579854-56579873 Msa0127330:CDS 50.0%
GGTGGAAACAAGGTTGTGTC+AGG - chr1_3:56579864-56579883 Msa0127330:CDS 50.0%
! CTTAGCCCACGAAGTACCAT+AGG - chr1_3:56579894-56579913 Msa0127330:CDS 50.0%
GGTGCAAGCAAGAATCACTC+AGG - chr1_3:56579937-56579956 Msa0127330:CDS 50.0%
TGCCACAAGGAAATCTCCTG+TGG - chr1_3:56580072-56580091 Msa0127330:CDS 50.0%
GCCACAAGGAAATCTCCTGT+GGG - chr1_3:56580073-56580092 Msa0127330:CDS 50.0%
TCCCACAGGAGATTTCCTTG+TGG + chr1_3:56580077-56580096 None:intergenic 50.0%
GTAGAGGGAAACTTTCCCAC+AGG + chr1_3:56580091-56580110 None:intergenic 50.0%
TTTCCCTCTACGCCAAACAC+AGG - chr1_3:56580100-56580119 Msa0127330:CDS 50.0%
TGACCTGTGTTTGGCGTAGA+GGG + chr1_3:56580106-56580125 None:intergenic 50.0%
TCGTTGCCTGCAATGCTTGT+AGG - chr1_3:56580564-56580583 Msa0127330:intron 50.0%
!! GGAACGAGCTCTTTGAAGTG+AGG + chr1_3:56580790-56580809 None:intergenic 50.0%
TTAGCCCATGGCCTATTCCT+TGG + chr1_3:56580900-56580919 None:intergenic 50.0%
! AACCTGGTAGCTAGTCTCGA+AGG + chr1_3:56581200-56581219 None:intergenic 50.0%
!! GGGTCAAGAATGGTGCCACA+AGG - chr1_3:56580059-56580078 Msa0127330:CDS 55.0%
CTGACCTGTGTTTGGCGTAG+AGG + chr1_3:56580107-56580126 None:intergenic 55.0%
! CGGCGAATAGGGTATCTCCA+AGG - chr1_3:56580880-56580899 Msa0127330:intron 55.0%
! CTCCTTCGAGACTAGCTACC+AGG - chr1_3:56581195-56581214 Msa0127330:intron 55.0%
!! GGGTCAAGAATGGTGCCACA+AGG - chr1_3:56580059-56580078 Msa0127330:CDS 55.0%
CTGACCTGTGTTTGGCGTAG+AGG + chr1_3:56580107-56580126 None:intergenic 55.0%
! CGGCGAATAGGGTATCTCCA+AGG - chr1_3:56580880-56580899 Msa0127330:intron 55.0%
! CTCCTTCGAGACTAGCTACC+AGG - chr1_3:56581195-56581214 Msa0127330:intron 55.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 56579450 56581498 56579450 ID=Msa0127330;Name=Msa0127330
chr1_3 mRNA 56579450 56581498 56579450 ID=Msa0127330-mRNA-1;Parent=Msa0127330;Name=Msa0127330-mRNA-1;_AED=0.13;_eAED=0.13;_QI=183|1|1|1|1|1|4|167|356
chr1_3 exon 56579450 56580401 56579450 ID=Msa0127330-mRNA-1:exon:17903;Parent=Msa0127330-mRNA-1
chr1_3 exon 56580827 56580888 56580827 ID=Msa0127330-mRNA-1:exon:17902;Parent=Msa0127330-mRNA-1
chr1_3 exon 56580990 56581132 56580990 ID=Msa0127330-mRNA-1:exon:17901;Parent=Msa0127330-mRNA-1
chr1_3 exon 56581235 56581498 56581235 ID=Msa0127330-mRNA-1:exon:17900;Parent=Msa0127330-mRNA-1
chr1_3 five_prime_UTR 56581316 56581498 56581316 ID=Msa0127330-mRNA-1:five_prime_utr;Parent=Msa0127330-mRNA-1
chr1_3 CDS 56581235 56581315 56581235 ID=Msa0127330-mRNA-1:cds;Parent=Msa0127330-mRNA-1
chr1_3 CDS 56580990 56581132 56580990 ID=Msa0127330-mRNA-1:cds;Parent=Msa0127330-mRNA-1
chr1_3 CDS 56580827 56580888 56580827 ID=Msa0127330-mRNA-1:cds;Parent=Msa0127330-mRNA-1
chr1_3 CDS 56579617 56580401 56579617 ID=Msa0127330-mRNA-1:cds;Parent=Msa0127330-mRNA-1
chr1_3 three_prime_UTR 56579450 56579616 56579450 ID=Msa0127330-mRNA-1:three_prime_utr;Parent=Msa0127330-mRNA-1
Gene Sequence

>Msa0127330

ATGGTTGCGAGAACCCCACCAAAGCTTAAGAGAACTTTAGCTGCTCTAAATCCTGTTCTCATTAGAGAAACACTCAACAAGGTGGATCAATGCATGGCTCGGCTGCAAGAACTTCAGAACACTGCAACTGGTGGAAACAAGGTTGTGTCAGGGGTCGATCTTAGCCCACGAAGTACCATAGGTTATCTCAAAACTAGTCTCAGGTGCAAGCAAGAATCACTCAGGGTCAAGAATGGTGCCACAAGGAAATCTCCTGTGGGAAAGTTTCCCTCTACGCCAAACACAGGTGAATGGAGGCGAATGTCGTTGCCTGCAATGCTTGTAGGAGAAACTCTTGGAGAAATTTTACAGGCTAGTCAATTTGCAAGAGAAATTGTTTCAGCAGTTGGTGACAAAATTCCCTCCAAAGATGACCCAAAAACACCAATGTCTCAAAGGCCAAACAAGAAAATAAACCTCGAAAACACACAACTTAAGTCTAGAAGGAAGAAGGAGAAACAAACTAAACTACACAATGACGGTTCTCCCTCACTTCAAAGAGCTCGTTCCAGAATCACTTTTAAGGTTTCTCCTCCAAAAGTTAAAGAATTTGATAGAGAAAGCAACAAGTATTTGTCTTCGGCGAATAGGGTATCTCCAAGGAATAGGCCATGGGCTAAAAAAACTGTACTTTTCCCCAACCCTTTGTTCAAGTCAACTCAATGTTCTTCATCACAGTCACAGCAACAGCAGTTTTGCAAAACAAGGTCTCCTATTATTTCAAGAAATAGAGGACCAACAACACCACACAAGTTTTTGATTAAATCTCCACCATCAAACTCCAAAGTCAAGATCAAAAGCACTACAACTGTGTCTATTTCACCCACAAGACTTGCAAGTTTGAGCAAGAATTCTCCAAAAAGATCGACTGCGGCTAAATTCCGTCGATCTTTCTCTCCTTCGAGACTAGCTACCAGGTTAGTTTCACCATTAAGGAGCAAGAAAACTGCACAGAAAAGTGATGGAATTGTAAGTGGACTGAAACAGCGCCCAGTATCAACAGTTCAATTCCCTTCTAGTAGAAGAATTTAA
Protein sequence

>Msa0127330

MVARTPPKLKRTLAALNPVLIRETLNKVDQCMARLQELQNTATGGNKVVSGVDLSPRSTIGYLKTSLRCKQESLRVKNGATRKSPVGKFPSTPNTGEWRRMSLPAMLVGETLGEILQASQFAREIVSAVGDKIPSKDDPKTPMSQRPNKKINLENTQLKSRRKKEKQTKLHNDGSPSLQRARSRITFKVSPPKVKEFDRESNKYLSSANRVSPRNRPWAKKTVLFPNPLFKSTQCSSSQSQQQQFCKTRSPIISRNRGPTTPHKFLIKSPPSNSKVKIKSTTTVSISPTRLASLSKNSPKRSTAAKFRRSFSPSRLATRLVSPLRSKKTAQKSDGIVSGLKQRPVSTVQFPSSRRI*