Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0129760 | XP_003591659.2 | 99.345 | 458 | 3 | 0 | 1 | 458 | 1 | 458 | 0.0 | 941 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0129760 | sp|Q9P2S5|WRP73_HUMAN | 45.598 | 443 | 235 | 5 | 1 | 441 | 1 | 439 | 1.15e-146 | 429 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0129760 | G7I305 | 99.345 | 458 | 3 | 0 | 1 | 458 | 1 | 458 | 0.0 | 941 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0034530 | Msa0129760 | 0.977417 | 9.731304e-144 | -8.615850e-47 |
| Msa0046840 | Msa0129760 | 0.800603 | 1.333963e-48 | -8.615850e-47 |
| Msa0129760 | Msa0260040 | 0.983460 | 8.402382e-158 | -8.615850e-47 |
| Msa0129760 | Msa1147700 | 0.800976 | 1.119562e-48 | -8.615850e-47 |
| Msa0129760 | Msa1240940 | 0.825384 | 4.828688e-54 | -8.615850e-47 |
| Msa0129760 | Msa1282300 | 0.814185 | 1.751824e-51 | -8.615850e-47 |
| Msa0129760 | Msa1395260 | 0.956097 | 6.575319e-114 | -8.615850e-47 |
| Msa0129760 | Msa1435110 | 0.819841 | 9.396850e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0129760 | MtrunA17_Chr1g0196901 | 99.345 | 458 | 3 | 0 | 1 | 458 | 1 | 458 | 0.0 | 941 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0129760 | AT5G07590.2 | 82.096 | 458 | 82 | 0 | 1 | 458 | 1 | 458 | 0.0 | 798 |
| Msa0129760 | AT5G07590.1 | 82.096 | 458 | 82 | 0 | 1 | 458 | 1 | 458 | 0.0 | 798 |
| Msa0129760 | AT5G07590.3 | 82.096 | 458 | 82 | 0 | 1 | 458 | 1 | 458 | 0.0 | 798 |
| Msa0129760 | AT5G07590.4 | 81.186 | 388 | 73 | 0 | 71 | 458 | 1 | 388 | 0.0 | 674 |
Find 151 sgRNAs with CRISPR-Local
Find 403 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCTCCCTGTGGTCAGTTTC+TGG | 0.169179 | 1_3:-59828067 | Msa0129760:CDS |
| ACGATAGTTCTATAGTAATA+TGG | 0.234418 | 1_3:-59829770 | Msa0129760:CDS |
| CAGCTTACCGATTCCTTGTT+TGG | 0.246089 | 1_3:+59827482 | None:intergenic |
| AGCTTACCGATTCCTTGTTT+GGG | 0.251983 | 1_3:+59827483 | None:intergenic |
| GTTGCCAAAGCATGCTTCTA+AGG | 0.256616 | 1_3:-59829946 | Msa0129760:CDS |
| TTGTCATTCATGGGAAATAA+TGG | 0.260909 | 1_3:-59829844 | Msa0129760:CDS |
| TTCACTAGATTCTGGCAATA+AGG | 0.264051 | 1_3:+59826526 | None:intergenic |
| ACCGAATCATTGTTAGAGTT+TGG | 0.271747 | 1_3:+59826075 | None:intergenic |
| TCTTCCAAGTTAAATGATTC+AGG | 0.272275 | 1_3:+59828013 | None:intergenic |
| GTAAGTATGTGACGACTATC+TGG | 0.283995 | 1_3:+59830035 | None:intergenic |
| ATCTGTTATCTTGTCATTCA+TGG | 0.293790 | 1_3:-59829854 | Msa0129760:CDS |
| TCTTGCATGTCCACTCTGGC+TGG | 0.314236 | 1_3:+59830099 | None:intergenic |
| TTGTGATGACATTAATTCTA+AGG | 0.319324 | 1_3:-59826134 | Msa0129760:three_prime_UTR |
| CCGATTCCTTGTTTGGGGTT+AGG | 0.323650 | 1_3:+59827489 | None:intergenic |
| TTGAATTTGCGGTGTGATAA+TGG | 0.326728 | 1_3:-59831471 | Msa0129760:exon |
| TTCAGTTGCGTTTAACAGTT+TGG | 0.338480 | 1_3:-59830001 | Msa0129760:CDS |
| GAAAAGTATATGAAACAAAA+AGG | 0.351916 | 1_3:-59831668 | Msa0129760:five_prime_UTR |
| CCCTATCAGAGTGGCAGCTT+GGG | 0.363366 | 1_3:-59826732 | Msa0129760:CDS |
| CAAGCATATGAAAGTGGATT+AGG | 0.363542 | 1_3:-59828108 | Msa0129760:CDS |
| TCGTGACACTCTTTCTTTCA+AGG | 0.366996 | 1_3:-59831357 | Msa0129760:intron |
| TTCTGAAATGGTAAATTGAT+TGG | 0.374213 | 1_3:+59827528 | None:intergenic |
| TTACATTCTTATTTCTGATA+AGG | 0.378563 | 1_3:+59826163 | None:intergenic |
| GAGCTATATTCACTAGATTC+TGG | 0.387589 | 1_3:+59826518 | None:intergenic |
| TGGCAGTTGTCTGCTTCTTA+AGG | 0.388500 | 1_3:-59826579 | Msa0129760:CDS |
| GACAGACATTAGATCTGAAA+TGG | 0.391243 | 1_3:+59831635 | None:intergenic |
| ACAAAATTAGCTATATTGAA+TGG | 0.394275 | 1_3:-59830190 | Msa0129760:CDS |
| AAGTGAGTAAAACAAAATTA+TGG | 0.397073 | 1_3:-59826478 | Msa0129760:three_prime_UTR |
| ACCTCATACCTTACTCTAAA+GGG | 0.407625 | 1_3:+59827561 | None:intergenic |
| AGAGTGTCTCTCCTGTTTGT+TGG | 0.409836 | 1_3:-59826354 | Msa0129760:three_prime_UTR |
| GGGGTTTCCTTTACAAGAGA+TGG | 0.414516 | 1_3:-59829924 | Msa0129760:CDS |
| TTGTCTGCTTCTTAAGGATA+AGG | 0.414943 | 1_3:-59826573 | Msa0129760:CDS |
| TGCCATCAGAATTCCACTTC+AGG | 0.415273 | 1_3:+59826597 | None:intergenic |
| CAAGGGCCACGGACTGCATA+TGG | 0.415280 | 1_3:+59827970 | None:intergenic |
| CACTGAATGTTACAAACAAA+CGG | 0.417653 | 1_3:-59831444 | Msa0129760:CDS |
| TCACTAGATTCTGGCAATAA+GGG | 0.418573 | 1_3:+59826527 | None:intergenic |
| CTTACTCTAAAGGGTCGTTC+TGG | 0.420663 | 1_3:+59827570 | None:intergenic |
| AAACGAAACCCTTGAATTTG+CGG | 0.422643 | 1_3:-59831482 | Msa0129760:five_prime_UTR |
| TCCCAAGCTGCCACTCTGAT+AGG | 0.424058 | 1_3:+59826731 | None:intergenic |
| GATTCAGGACTCGCAGCATC+TGG | 0.433237 | 1_3:+59828028 | None:intergenic |
| TGCATTTGGGAAAATTCAAA+AGG | 0.433598 | 1_3:-59826245 | Msa0129760:three_prime_UTR |
| CTGTGGTCAGTTTCTGGCAG+TGG | 0.439090 | 1_3:-59828061 | Msa0129760:CDS |
| CGATAGTTCTATAGTAATAT+GGG | 0.442798 | 1_3:-59829769 | Msa0129760:CDS |
| TCAGCAGGAGGCTTCTGAAA+TGG | 0.444822 | 1_3:+59827516 | None:intergenic |
| TGTCATTCATGGGAAATAAT+GGG | 0.445106 | 1_3:-59829843 | Msa0129760:CDS |
| GAGTGTCTCTCCTGTTTGTT+GGG | 0.453736 | 1_3:-59826353 | Msa0129760:three_prime_UTR |
| AGTGACCAAGCCTGTATCAT+TGG | 0.453814 | 1_3:+59830125 | None:intergenic |
| GTCTCTCCTGTTTGTTGGGT+AGG | 0.457436 | 1_3:-59826349 | Msa0129760:three_prime_UTR |
| CATGTATAAATGTGTGCTTC+CGG | 0.459983 | 1_3:+59826679 | None:intergenic |
| TTATACATGTGGACCCCATC+TGG | 0.460008 | 1_3:-59826665 | Msa0129760:CDS |
| GACAAGATAACAGATTTATA+TGG | 0.464301 | 1_3:+59829862 | None:intergenic |
| CAAAATTAGCTATATTGAAT+GGG | 0.469114 | 1_3:-59830189 | Msa0129760:CDS |
| GCGTTTAACAGTTTGGTCAC+TGG | 0.470789 | 1_3:-59829994 | Msa0129760:CDS |
| TGCTGTTGACACTCTAGACT+TGG | 0.470800 | 1_3:-59829814 | Msa0129760:CDS |
| ACCCTATCAGAGTGGCAGCT+TGG | 0.472760 | 1_3:-59826733 | Msa0129760:CDS |
| ATTATCACACCGCAAATTCA+AGG | 0.473274 | 1_3:+59831473 | None:intergenic |
| AAGCATGCTTTGGCAACTGC+AGG | 0.473367 | 1_3:+59829952 | None:intergenic |
| TTGGGGTTAGGTTTCTCAGC+AGG | 0.473409 | 1_3:+59827501 | None:intergenic |
| TTTCGATAACAGACCTGAAG+TGG | 0.477463 | 1_3:-59826610 | Msa0129760:CDS |
| CTATCTTTATCTTTGTGCAC+CGG | 0.480844 | 1_3:-59826442 | Msa0129760:three_prime_UTR |
| CATTGCGAGTACATATGTAT+TGG | 0.480916 | 1_3:+59826828 | None:intergenic |
| CAGAACGACCCTTTAGAGTA+AGG | 0.481336 | 1_3:-59827569 | Msa0129760:CDS |
| TCCAAACTCTAACAATGATT+CGG | 0.485791 | 1_3:-59826076 | Msa0129760:three_prime_UTR |
| TTGAAAAGACACCTTCCGTC+TGG | 0.486492 | 1_3:+59828135 | None:intergenic |
| TGCAAAACGAAAGGTTTCAC+TGG | 0.486922 | 1_3:+59826264 | None:intergenic |
| GCATATCCTACCCAACAAAC+AGG | 0.490821 | 1_3:+59826343 | None:intergenic |
| ACGGCTAAGAAACGAGCATT+GGG | 0.492449 | 1_3:+59831404 | None:intergenic |
| TGCCTACAGTACTCTGGGTA+TGG | 0.492486 | 1_3:-59826799 | Msa0129760:CDS |
| GGATTCACCACTTGATTACA+AGG | 0.493726 | 1_3:-59829748 | Msa0129760:intron |
| ATAGTATGCCTACAGTACTC+TGG | 0.496387 | 1_3:-59826805 | Msa0129760:CDS |
| TCTGTTATCTTGTCATTCAT+GGG | 0.498192 | 1_3:-59829853 | Msa0129760:CDS |
| GTTATCGAAAATTGTGGTAG+AGG | 0.501423 | 1_3:+59826623 | None:intergenic |
| TAATGTGAGTGAGTGCAGTT+TGG | 0.508681 | 1_3:+59831574 | None:intergenic |
| TTAATCATGATTAGTGAAAA+CGG | 0.509100 | 1_3:-59831554 | Msa0129760:five_prime_UTR |
| TGTGGTCAGTTTCTGGCAGT+GGG | 0.509705 | 1_3:-59828060 | Msa0129760:CDS |
| AAGTATCAAGCATATGAAAG+TGG | 0.510080 | 1_3:-59828114 | Msa0129760:CDS |
| AGAGGATGTACTCAGAATCA+AGG | 0.514760 | 1_3:+59830165 | None:intergenic |
| CTTGCATGTCCACTCTGGCT+GGG | 0.514966 | 1_3:+59830100 | None:intergenic |
| ATCTAATGTCTGTCTTCACT+TGG | 0.521957 | 1_3:-59831626 | Msa0129760:five_prime_UTR |
| GGGTTAGGTTTCTCAGCAGG+AGG | 0.523289 | 1_3:+59827504 | None:intergenic |
| ACTGAATGTTACAAACAAAC+GGG | 0.523630 | 1_3:-59831443 | Msa0129760:CDS |
| GACCTCATACCTTACTCTAA+AGG | 0.524033 | 1_3:+59827560 | None:intergenic |
| GAATTTGAATTTACAACTGA+AGG | 0.526054 | 1_3:+59826381 | None:intergenic |
| TCTATCTTGCATGTCCACTC+TGG | 0.528453 | 1_3:+59830095 | None:intergenic |
| TAGAGGAACATGAACACAAA+AGG | 0.535149 | 1_3:+59826640 | None:intergenic |
| CCCAAGCTGCCACTCTGATA+GGG | 0.538485 | 1_3:+59826732 | None:intergenic |
| TTGCCAAAGCATGCTTCTAA+GGG | 0.541007 | 1_3:-59829945 | Msa0129760:CDS |
| CCTAACCCCAAACAAGGAAT+CGG | 0.541197 | 1_3:-59827489 | Msa0129760:intron |
| TTTCCCAAATGCAAAACGAA+AGG | 0.546608 | 1_3:+59826255 | None:intergenic |
| AAGATAGACGAAGGTCCTGC+TGG | 0.548383 | 1_3:-59830080 | Msa0129760:CDS |
| CGGGTAGGTAAGTGTAGCTA+AGG | 0.549370 | 1_3:-59826422 | Msa0129760:three_prime_UTR |
| AAAAGCCAATGATACAGGCT+TGG | 0.553037 | 1_3:-59830130 | Msa0129760:CDS |
| TACAGCAATCTTAGTGCAGA+AGG | 0.553737 | 1_3:-59826756 | Msa0129760:CDS |
| TAGAGTAAGGTATGAGGTCA+TGG | 0.554199 | 1_3:-59827556 | Msa0129760:CDS |
| GACGGCTAAGAAACGAGCAT+TGG | 0.557333 | 1_3:+59831403 | None:intergenic |
| TGCTTCCGGTGCAGAAAACA+AGG | 0.559234 | 1_3:+59826693 | None:intergenic |
| GAGTCCTGAATCATTTAACT+TGG | 0.564823 | 1_3:-59828017 | Msa0129760:CDS |
| CTGCTGGTATTGCATATGCT+AGG | 0.566820 | 1_3:-59830064 | Msa0129760:CDS |
| GCTTACCGATTCCTTGTTTG+GGG | 0.567226 | 1_3:+59827484 | None:intergenic |
| TGAACACAAAAGGCACCAGA+TGG | 0.567725 | 1_3:+59826650 | None:intergenic |
| TAGTATGCCTACAGTACTCT+GGG | 0.568899 | 1_3:-59826804 | Msa0129760:CDS |
| ATTACTATAGAACTATCGTC+AGG | 0.569340 | 1_3:+59829774 | None:intergenic |
| TTGAAAACAGCAGCATAACA+AGG | 0.569520 | 1_3:+59827952 | None:intergenic |
| TTTATCTTTGTGCACCGGGT+AGG | 0.573724 | 1_3:-59826437 | Msa0129760:three_prime_UTR |
| TTATCACACCGCAAATTCAA+GGG | 0.573877 | 1_3:+59831474 | None:intergenic |
| AGGTCTGTTATCGAAAATTG+TGG | 0.577251 | 1_3:+59826617 | None:intergenic |
| GCATTGGGAGAGAAAGAAGA+AGG | 0.581405 | 1_3:+59831419 | None:intergenic |
| CTGGTATTGCATATGCTAGG+TGG | 0.587823 | 1_3:-59830061 | Msa0129760:CDS |
| GAACACAAAAGGCACCAGAT+GGG | 0.589683 | 1_3:+59826651 | None:intergenic |
| AAAATTATGGTAAATATGAA+CGG | 0.591977 | 1_3:-59826465 | Msa0129760:three_prime_UTR |
| ACCCTTTAGAGTAAGGTATG+AGG | 0.592074 | 1_3:-59827562 | Msa0129760:CDS |
| TAAGTATGTGACGACTATCT+GGG | 0.592440 | 1_3:+59830036 | None:intergenic |
| TATCTTTATCTTTGTGCACC+GGG | 0.593107 | 1_3:-59826441 | Msa0129760:three_prime_UTR |
| CTTAGCTACACTTACCTACC+CGG | 0.593162 | 1_3:+59826423 | None:intergenic |
| GTTCTAATCTATTCTCCAGA+CGG | 0.593469 | 1_3:-59828150 | Msa0129760:CDS |
| AAAACAAGGCGAGTGGATGT+CGG | 0.593540 | 1_3:+59826707 | None:intergenic |
| GTAGCTACCTTGTAATCAAG+TGG | 0.593883 | 1_3:+59829741 | None:intergenic |
| TAATGCATGAAAAGAGAATG+TGG | 0.597472 | 1_3:+59826186 | None:intergenic |
| AAACAGGAGAGACACTCTCA+TGG | 0.600151 | 1_3:+59826359 | None:intergenic |
| GACCTGAAGTGGAATTCTGA+TGG | 0.603890 | 1_3:-59826599 | Msa0129760:CDS |
| ACATTAGATCTGAAATGGAA+TGG | 0.607175 | 1_3:+59831640 | None:intergenic |
| TAGACTTGGCTGATGTCGAA+TGG | 0.607385 | 1_3:-59829800 | Msa0129760:CDS |
| TTCCATACCCAGAGTACTGT+AGG | 0.607984 | 1_3:+59826797 | None:intergenic |
| TAATACATGCTCTTACAACA+AGG | 0.608608 | 1_3:+59826212 | None:intergenic |
| AATTTGCAGCGATTTGCACA+AGG | 0.609411 | 1_3:-59829899 | Msa0129760:CDS |
| CACTGCCAGAAACTGACCAC+AGG | 0.612466 | 1_3:+59828062 | None:intergenic |
| GCCAAAGCATGCTTCTAAGG+GGG | 0.613203 | 1_3:-59829943 | Msa0129760:CDS |
| GAGGATGTACTCAGAATCAA+GGG | 0.613958 | 1_3:+59830166 | None:intergenic |
| TAATCTATTCTCCAGACGGA+AGG | 0.615741 | 1_3:-59828146 | Msa0129760:CDS |
| AACACAAAAGGCACCAGATG+GGG | 0.616647 | 1_3:+59826652 | None:intergenic |
| CTAGCATATGCAATACCAGC+AGG | 0.619246 | 1_3:+59830065 | None:intergenic |
| GAGAAACCTAACCCCAAACA+AGG | 0.622655 | 1_3:-59827495 | Msa0129760:CDS |
| AGTTTGGTCACTGGTAAACA+CGG | 0.625331 | 1_3:-59829985 | Msa0129760:CDS |
| CAGCAGCATAACAAGGGCCA+CGG | 0.626787 | 1_3:+59827959 | None:intergenic |
| CTGCATCCATATGCAGTCCG+TGG | 0.627146 | 1_3:-59827976 | Msa0129760:CDS |
| AAACTCTAACAATGATTCGG+TGG | 0.638248 | 1_3:-59826073 | Msa0129760:three_prime_UTR |
| TGCCAAAGCATGCTTCTAAG+GGG | 0.639649 | 1_3:-59829944 | Msa0129760:CDS |
| AATACATGCTCTTACAACAA+GGG | 0.646132 | 1_3:+59826213 | None:intergenic |
| GAAGCACACATTTATACATG+TGG | 0.647516 | 1_3:-59826676 | Msa0129760:CDS |
| GGTGCAGAAAACAAGGCGAG+TGG | 0.648222 | 1_3:+59826700 | None:intergenic |
| TTAGATCTGAAATGGAATGG+TGG | 0.664598 | 1_3:+59831643 | None:intergenic |
| TGAAAACAGCAGCATAACAA+GGG | 0.667308 | 1_3:+59827953 | None:intergenic |
| TCTGACATATCAAGTTGCAG+AGG | 0.678074 | 1_3:+59827837 | None:intergenic |
| GGTCACTGACCCAGCCAGAG+TGG | 0.681334 | 1_3:-59830109 | Msa0129760:CDS |
| TAGGAGTTAAAAGTGTGTCG+TGG | 0.691808 | 1_3:-59828089 | Msa0129760:CDS |
| ACTGCCAGAAACTGACCACA+GGG | 0.692627 | 1_3:+59828063 | None:intergenic |
| AAAGAGTGTCACGAATGACG+AGG | 0.694631 | 1_3:+59831366 | None:intergenic |
| GAGGCGATAATCAACTGCGA+CGG | 0.694862 | 1_3:+59831385 | None:intergenic |
| TGGACATGCAAGATAGACGA+AGG | 0.697728 | 1_3:-59830089 | Msa0129760:CDS |
| GCAGAAGGACCCTATCAGAG+TGG | 0.712844 | 1_3:-59826741 | Msa0129760:CDS |
| GATTCTGAGTACATCCTCTG+CGG | 0.720327 | 1_3:-59830161 | Msa0129760:CDS |
| AGTGTGTCGTGGTCTCCCTG+TGG | 0.759227 | 1_3:-59828078 | Msa0129760:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGTATAATAATGTTGTAAAT+AGG | - | chr1_3:59826735-59826754 | Msa0129760:CDS | 15.0% |
| !! | ACAAATACAATAATATATGT+TGG | + | chr1_3:59827321-59827340 | None:intergenic | 15.0% |
| !! | ATATTTGAATTGCTTAAAAT+AGG | + | chr1_3:59828358-59828377 | None:intergenic | 15.0% |
| !!! | ATTTTAAGCAATTCAAATAT+TGG | - | chr1_3:59828358-59828377 | Msa0129760:intron | 15.0% |
| !!! | ATAATTGTTGTGTTTATTTT+AGG | + | chr1_3:59828441-59828460 | None:intergenic | 15.0% |
| !! | TTGAAACTATGTTTAAAAAT+TGG | - | chr1_3:59829027-59829046 | Msa0129760:intron | 15.0% |
| !!! | TTTATTTGATTTAAGCTTTT+TGG | - | chr1_3:59830098-59830117 | Msa0129760:CDS | 15.0% |
| !!! | TTTCTAATTTTACATTTTTC+TGG | - | chr1_3:59830588-59830607 | Msa0129760:intron | 15.0% |
| !! | AAAATTATGGTAAATATGAA+CGG | - | chr1_3:59831287-59831306 | Msa0129760:intron | 15.0% |
| !!! | GAAAAGTATATGAAACAAAA+AGG | - | chr1_3:59826084-59826103 | Msa0129760:three_prime_UTR | 20.0% |
| !! | TTAATCATGATTAGTGAAAA+CGG | - | chr1_3:59826198-59826217 | Msa0129760:three_prime_UTR | 20.0% |
| !! | AAAGAATACAAGAATGTATT+TGG | - | chr1_3:59827383-59827402 | Msa0129760:intron | 20.0% |
| !! | ACAAAATTAGCTATATTGAA+TGG | - | chr1_3:59827562-59827581 | Msa0129760:CDS | 20.0% |
| !! | CAAAATTAGCTATATTGAAT+GGG | - | chr1_3:59827563-59827582 | Msa0129760:CDS | 20.0% |
| !!! | TTTTTTTTCCATTCCATTAA+CGG | + | chr1_3:59828184-59828203 | None:intergenic | 20.0% |
| !! | AGTTAAATCTTATATTCCAT+AGG | - | chr1_3:59828296-59828315 | Msa0129760:intron | 20.0% |
| !! | TTTGTTTGGATTATTAGAAA+GGG | + | chr1_3:59828417-59828436 | None:intergenic | 20.0% |
| !!! | TTTTGTTTGGATTATTAGAA+AGG | + | chr1_3:59828418-59828437 | None:intergenic | 20.0% |
| !!! | TGTTTATTTTAGGTTTTGTT+TGG | + | chr1_3:59828431-59828450 | None:intergenic | 20.0% |
| !!! | TTTTAAACATAGTTTCAAAG+TGG | + | chr1_3:59829025-59829044 | None:intergenic | 20.0% |
| !! | AAAGAAAAATATGAAAACGA+AGG | + | chr1_3:59830147-59830166 | None:intergenic | 20.0% |
| !! | TTAGTTAAAAGAAACTGATA+TGG | + | chr1_3:59830764-59830783 | None:intergenic | 20.0% |
| !! | AAGTGAGTAAAACAAAATTA+TGG | - | chr1_3:59831274-59831293 | Msa0129760:intron | 20.0% |
| !!! | TTACATTCTTATTTCTGATA+AGG | + | chr1_3:59831592-59831611 | None:intergenic | 20.0% |
| ! | GAATTTGATTAAATTCTGTG+TGG | - | chr1_3:59826436-59826455 | Msa0129760:three_prime_UTR | 25.0% |
| ! | AAAAATTGAATCCCATTAGT+GGG | + | chr1_3:59826573-59826592 | None:intergenic | 25.0% |
| ! | ATTATACAACTAACTTCATG+TGG | + | chr1_3:59826723-59826742 | None:intergenic | 25.0% |
| ! | CTAAAATCATTGGAAATAGA+TGG | - | chr1_3:59826809-59826828 | Msa0129760:CDS | 25.0% |
| ! | TTATATCCCAAAAATTTACC+CGG | + | chr1_3:59827147-59827166 | None:intergenic | 25.0% |
| !! | TTCTTTTATGTGAACTTATC+AGG | + | chr1_3:59827369-59827388 | None:intergenic | 25.0% |
| !! | AAATTTTCCATCTCTTGTAA+AGG | + | chr1_3:59827838-59827857 | None:intergenic | 25.0% |
| ! | GACAAGATAACAGATTTATA+TGG | + | chr1_3:59827893-59827912 | None:intergenic | 25.0% |
| !! | ACGATAGTTCTATAGTAATA+TGG | - | chr1_3:59827982-59828001 | Msa0129760:CDS | 25.0% |
| !! | CGATAGTTCTATAGTAATAT+GGG | - | chr1_3:59827983-59828002 | Msa0129760:CDS | 25.0% |
| ! | AGGAAAGAAAAATAGGAATT+AGG | + | chr1_3:59828043-59828062 | None:intergenic | 25.0% |
| !! | TTAACTAGTCTGTGAATTTA+AGG | - | chr1_3:59828123-59828142 | Msa0129760:CDS | 25.0% |
| ! | AAAAATAGCATACAGTTGTT+TGG | - | chr1_3:59828200-59828219 | Msa0129760:intron | 25.0% |
| ! | TTGCTTAAAATAGGATAGAA+TGG | + | chr1_3:59828349-59828368 | None:intergenic | 25.0% |
| ! | GTAGTAAGTGTTTGTTTAAT+AGG | + | chr1_3:59828476-59828495 | None:intergenic | 25.0% |
| ! | TCACACAATTGAAAACAATT+AGG | - | chr1_3:59828589-59828608 | Msa0129760:intron | 25.0% |
| !!! | CATAGACTTTGATTTTGATT+TGG | + | chr1_3:59828632-59828651 | None:intergenic | 25.0% |
| ! | GGCTTAAAAAAAAGGATATT+TGG | + | chr1_3:59828776-59828795 | None:intergenic | 25.0% |
| ! | ATATCAATGTACAATAGACA+TGG | - | chr1_3:59828898-59828917 | Msa0129760:intron | 25.0% |
| ! | AATTGGAGATGAAAAATAGT+TGG | - | chr1_3:59829044-59829063 | Msa0129760:intron | 25.0% |
| ! | ATAGGAATGTCATAATAAGT+TGG | - | chr1_3:59829097-59829116 | Msa0129760:intron | 25.0% |
| ! | AAGCTTTACATGATTGTTAA+GGG | + | chr1_3:59829285-59829304 | None:intergenic | 25.0% |
| ! | TAAGCTTTACATGATTGTTA+AGG | + | chr1_3:59829286-59829305 | None:intergenic | 25.0% |
| ! | TATAGAGAATGTTTCATGAA+TGG | - | chr1_3:59829424-59829443 | Msa0129760:intron | 25.0% |
| ! | GTATAAAACAAAAACGACTA+AGG | + | chr1_3:59829578-59829597 | None:intergenic | 25.0% |
| !!! | GTCGTTTTTGTTTTATACTT+AGG | - | chr1_3:59829580-59829599 | Msa0129760:intron | 25.0% |
| !! | TTTGACACTTTTATTGTTGA+TGG | - | chr1_3:59829833-59829852 | Msa0129760:CDS | 25.0% |
| ! | AAAAGTTTCACATGTATTGT+TGG | - | chr1_3:59830045-59830064 | Msa0129760:CDS | 25.0% |
| !!! | TTCTGAAATGGTAAATTGAT+TGG | + | chr1_3:59830227-59830246 | None:intergenic | 25.0% |
| ! | TCTTAATTCCATTATTTGCA+TGG | - | chr1_3:59830365-59830384 | Msa0129760:intron | 25.0% |
| ! | AGAAACTGAATTATTTCATG+TGG | - | chr1_3:59830397-59830416 | Msa0129760:intron | 25.0% |
| !!! | TTCATGTGGATATTTTTTTC+TGG | - | chr1_3:59830411-59830430 | Msa0129760:intron | 25.0% |
| !!! | TTTCTGGTCAATTTGATTTT+TGG | - | chr1_3:59830427-59830446 | Msa0129760:intron | 25.0% |
| ! | AAAGGATATATCGGTATTAA+GGG | + | chr1_3:59830514-59830533 | None:intergenic | 25.0% |
| ! | CTAAACATGAAAGGATATAT+CGG | + | chr1_3:59830523-59830542 | None:intergenic | 25.0% |
| ! | TAACAATATCATTGGAGATA+AGG | + | chr1_3:59830552-59830571 | None:intergenic | 25.0% |
| ! | GAATCACATAACAATATCAT+TGG | + | chr1_3:59830560-59830579 | None:intergenic | 25.0% |
| ! | TGCAACAAAGAAAGAATATA+TGG | + | chr1_3:59830637-59830656 | None:intergenic | 25.0% |
| !! | ATTCTTTATTGATGATACCT+TGG | - | chr1_3:59830702-59830721 | Msa0129760:intron | 25.0% |
| !!! | CAAGAAAAATCAGTTTTGTT+AGG | + | chr1_3:59830876-59830895 | None:intergenic | 25.0% |
| ! | GAATTTGAATTTACAACTGA+AGG | + | chr1_3:59831374-59831393 | None:intergenic | 25.0% |
| ! | CCTATTAAAAATGAACTCAT+AGG | + | chr1_3:59831434-59831453 | None:intergenic | 25.0% |
| !!! | CCTATGAGTTCATTTTTAAT+AGG | - | chr1_3:59831431-59831450 | Msa0129760:CDS | 25.0% |
| ! | TTGTGATGACATTAATTCTA+AGG | - | chr1_3:59831618-59831637 | Msa0129760:five_prime_UTR | 25.0% |
| ! | ACATTAGATCTGAAATGGAA+TGG | + | chr1_3:59826115-59826134 | None:intergenic | 30.0% |
| CACTGAATGTTACAAACAAA+CGG | - | chr1_3:59826308-59826327 | Msa0129760:three_prime_UTR | 30.0% | |
| ACTGAATGTTACAAACAAAC+GGG | - | chr1_3:59826309-59826328 | Msa0129760:three_prime_UTR | 30.0% | |
| TTTGATTAAATTCTGTGTGG+TGG | - | chr1_3:59826439-59826458 | Msa0129760:three_prime_UTR | 30.0% | |
| ! | TTTTTCCATTTCCATCCAAA+AGG | + | chr1_3:59826532-59826551 | None:intergenic | 30.0% |
| AAAATTGAATCCCATTAGTG+GGG | + | chr1_3:59826572-59826591 | None:intergenic | 30.0% | |
| CAAAAATTGAATCCCATTAG+TGG | + | chr1_3:59826574-59826593 | None:intergenic | 30.0% | |
| ! | AAACATGAAGCTGATGTTTT+AGG | - | chr1_3:59826659-59826678 | Msa0129760:CDS | 30.0% |
| AATGGAGACACTAAAATCAT+TGG | - | chr1_3:59826799-59826818 | Msa0129760:CDS | 30.0% | |
| ! | ATTGGAAATAGATGGATTTG+CGG | - | chr1_3:59826817-59826836 | Msa0129760:CDS | 30.0% |
| AACTTCTTATTGTAGCATGT+TGG | + | chr1_3:59826905-59826924 | None:intergenic | 30.0% | |
| AAAATACCGAGCTTGAAATA+TGG | - | chr1_3:59827019-59827038 | Msa0129760:intron | 30.0% | |
| ! | TGAATACCGGGTAAATTTTT+GGG | - | chr1_3:59827138-59827157 | Msa0129760:intron | 30.0% |
| AGTGCCTGTTGAAATTTAAA+TGG | - | chr1_3:59827187-59827206 | Msa0129760:intron | 30.0% | |
| ! | GTTGCCATTTAAATTTCAAC+AGG | + | chr1_3:59827194-59827213 | None:intergenic | 30.0% |
| AATCGAAAAATGAGCTGAAA+AGG | + | chr1_3:59827243-59827262 | None:intergenic | 30.0% | |
| ! | TATTTGGAACTTTAGTGTCT+AGG | - | chr1_3:59827399-59827418 | Msa0129760:intron | 30.0% |
| CCAAGTATATAATTCACCTA+TGG | + | chr1_3:59827434-59827453 | None:intergenic | 30.0% | |
| CCATAGGTGAATTATATACT+TGG | - | chr1_3:59827431-59827450 | Msa0129760:intron | 30.0% | |
| ! | AATATTTGGAATCTCTCAGA+TGG | + | chr1_3:59827472-59827491 | None:intergenic | 30.0% |
| AGATTCCAAATATTTGCTTC+TGG | - | chr1_3:59827478-59827497 | Msa0129760:intron | 30.0% | |
| ACAAACCAGAAGCAAATATT+TGG | + | chr1_3:59827486-59827505 | None:intergenic | 30.0% | |
| !! | AAATATTTGCTTCTGGTTTG+TGG | - | chr1_3:59827485-59827504 | Msa0129760:intron | 30.0% |
| CTATAAAAAGCCAATGATAC+AGG | - | chr1_3:59827617-59827636 | Msa0129760:intron | 30.0% | |
| ATCTGTTATCTTGTCATTCA+TGG | - | chr1_3:59827898-59827917 | Msa0129760:intron | 30.0% | |
| TCTGTTATCTTGTCATTCAT+GGG | - | chr1_3:59827899-59827918 | Msa0129760:intron | 30.0% | |
| TTGTCATTCATGGGAAATAA+TGG | - | chr1_3:59827908-59827927 | Msa0129760:intron | 30.0% | |
| TGTCATTCATGGGAAATAAT+GGG | - | chr1_3:59827909-59827928 | Msa0129760:intron | 30.0% | |
| ATTACTATAGAACTATCGTC+AGG | + | chr1_3:59827981-59828000 | None:intergenic | 30.0% | |
| GGTTTGAATTGAGATAGAAT+GGG | + | chr1_3:59828163-59828182 | None:intergenic | 30.0% | |
| ATCTCAATTCAAACCGTTAA+TGG | - | chr1_3:59828168-59828187 | Msa0129760:intron | 30.0% | |
| AATTCAAACCGTTAATGGAA+TGG | - | chr1_3:59828173-59828192 | Msa0129760:intron | 30.0% | |
| ACAGTTGTTTGGACAATTTA+TGG | - | chr1_3:59828211-59828230 | Msa0129760:intron | 30.0% | |
| GGGAATATATTCTATACCTA+TGG | + | chr1_3:59828315-59828334 | None:intergenic | 30.0% | |
| AACAACAATGTATACACACT+AGG | + | chr1_3:59828527-59828546 | None:intergenic | 30.0% | |
| ! | TTGTTTTCAATTGTGTGACA+TGG | + | chr1_3:59828587-59828606 | None:intergenic | 30.0% |
| CACAATTGAAAACAATTAGG+CGG | - | chr1_3:59828592-59828611 | Msa0129760:intron | 30.0% | |
| !!! | AGACTTTGATTTTGATTTGG+TGG | + | chr1_3:59828629-59828648 | None:intergenic | 30.0% |
| TCAAATTCAAACACCTCTAA+AGG | - | chr1_3:59828653-59828672 | Msa0129760:intron | 30.0% | |
| ! | TTGTTATTGTTCTTGCATCT+AGG | + | chr1_3:59828696-59828715 | None:intergenic | 30.0% |
| TATCAAATAGCTGACATTGT+AGG | + | chr1_3:59828881-59828900 | None:intergenic | 30.0% | |
| GTATATCACCCATAATGTTT+GGG | - | chr1_3:59829232-59829251 | Msa0129760:intron | 30.0% | |
| AAGGGTCTAGAAAACTAATA+AGG | + | chr1_3:59829267-59829286 | None:intergenic | 30.0% | |
| !!! | TCCTGTTTTTTTTAGACTGA+TGG | - | chr1_3:59829514-59829533 | Msa0129760:intron | 30.0% |
| ACCATCAGTCTAAAAAAAAC+AGG | + | chr1_3:59829518-59829537 | None:intergenic | 30.0% | |
| AAGTATCAAGCATATGAAAG+TGG | - | chr1_3:59829638-59829657 | Msa0129760:intron | 30.0% | |
| TCTTCCAAGTTAAATGATTC+AGG | + | chr1_3:59829742-59829761 | None:intergenic | 30.0% | |
| ! | GATTTTTCTCAAGGAAACAA+TGG | - | chr1_3:59829954-59829973 | Msa0129760:CDS | 30.0% |
| ! | ATTTAAGCTTTTTGGACAGT+TGG | - | chr1_3:59830106-59830125 | Msa0129760:CDS | 30.0% |
| ! | TTGAAGCATTCAAAAGTTAG+AGG | + | chr1_3:59830301-59830320 | None:intergenic | 30.0% |
| ! | AATAATGGAATTAAGAACCC+TGG | + | chr1_3:59830361-59830380 | None:intergenic | 30.0% |
| CCTATTTACCATGCAAATAA+TGG | + | chr1_3:59830376-59830395 | None:intergenic | 30.0% | |
| CCATTATTTGCATGGTAAAT+AGG | - | chr1_3:59830373-59830392 | Msa0129760:intron | 30.0% | |
| GAAAGGATATATCGGTATTA+AGG | + | chr1_3:59830515-59830534 | None:intergenic | 30.0% | |
| GATATTGTTATGTGATTCAC+TGG | - | chr1_3:59830562-59830581 | Msa0129760:intron | 30.0% | |
| TTCCAAGTTATTATGTCCTT+TGG | - | chr1_3:59830658-59830677 | Msa0129760:intron | 30.0% | |
| ATCCAAAGGACATAATAACT+TGG | + | chr1_3:59830663-59830682 | None:intergenic | 30.0% | |
| GAACTAAAGAATCAATCCAA+AGG | + | chr1_3:59830677-59830696 | None:intergenic | 30.0% | |
| !!! | AAAAATCAGTTTTGTTAGGC+GGG | + | chr1_3:59830872-59830891 | None:intergenic | 30.0% |
| !!! | GAAAAATCAGTTTTGTTAGG+CGG | + | chr1_3:59830873-59830892 | None:intergenic | 30.0% |
| !! | ACAAAACTGATTTTTCTTGC+AGG | - | chr1_3:59830877-59830896 | Msa0129760:intron | 30.0% |
| ! | AAACCTTTCGTTTTGCATTT+GGG | - | chr1_3:59831494-59831513 | Msa0129760:five_prime_UTR | 30.0% |
| TGCATTTGGGAAAATTCAAA+AGG | - | chr1_3:59831507-59831526 | Msa0129760:five_prime_UTR | 30.0% | |
| AATACATGCTCTTACAACAA+GGG | + | chr1_3:59831542-59831561 | None:intergenic | 30.0% | |
| TAATACATGCTCTTACAACA+AGG | + | chr1_3:59831543-59831562 | None:intergenic | 30.0% | |
| TAATGCATGAAAAGAGAATG+TGG | + | chr1_3:59831569-59831588 | None:intergenic | 30.0% | |
| TCCAAACTCTAACAATGATT+CGG | - | chr1_3:59831676-59831695 | Msa0129760:five_prime_UTR | 30.0% | |
| ! | TTAGATCTGAAATGGAATGG+TGG | + | chr1_3:59826112-59826131 | None:intergenic | 35.0% |
| GACAGACATTAGATCTGAAA+TGG | + | chr1_3:59826120-59826139 | None:intergenic | 35.0% | |
| ATCTAATGTCTGTCTTCACT+TGG | - | chr1_3:59826126-59826145 | Msa0129760:three_prime_UTR | 35.0% | |
| AAACGAAACCCTTGAATTTG+CGG | - | chr1_3:59826270-59826289 | Msa0129760:three_prime_UTR | 35.0% | |
| TTATCACACCGCAAATTCAA+GGG | + | chr1_3:59826281-59826300 | None:intergenic | 35.0% | |
| ATTATCACACCGCAAATTCA+AGG | + | chr1_3:59826282-59826301 | None:intergenic | 35.0% | |
| TTGAATTTGCGGTGTGATAA+TGG | - | chr1_3:59826281-59826300 | Msa0129760:three_prime_UTR | 35.0% | |
| GGATCCCTTAAATAAAGTCT+CGG | - | chr1_3:59826499-59826518 | Msa0129760:exon | 35.0% | |
| GATCCCTTAAATAAAGTCTC+GGG | - | chr1_3:59826500-59826519 | Msa0129760:exon | 35.0% | |
| ! | GTACCCGAGACTTTATTTAA+GGG | + | chr1_3:59826506-59826525 | None:intergenic | 35.0% |
| TGGATGGAAATGGAAAAATG+TGG | - | chr1_3:59826534-59826553 | Msa0129760:CDS | 35.0% | |
| TCAGTTCTTGTAAGATGTGA+TGG | - | chr1_3:59826686-59826705 | Msa0129760:CDS | 35.0% | |
| TAAGCGAGTCTTCCAAAATT+TGG | - | chr1_3:59826769-59826788 | Msa0129760:CDS | 35.0% | |
| AAGCGAGTCTTCCAAAATTT+GGG | - | chr1_3:59826770-59826789 | Msa0129760:CDS | 35.0% | |
| ! | GTCTTCCAAAATTTGGGTTT+AGG | - | chr1_3:59826776-59826795 | Msa0129760:CDS | 35.0% |
| ! | CCATTCCTAAACCCAAATTT+TGG | + | chr1_3:59826784-59826803 | None:intergenic | 35.0% |
| ! | CCAAAATTTGGGTTTAGGAA+TGG | - | chr1_3:59826781-59826800 | Msa0129760:CDS | 35.0% |
| CATGTTGGATTTCAGATTTG+AGG | + | chr1_3:59826890-59826909 | None:intergenic | 35.0% | |
| ! | TGTGTTTGTTGGATCAAGAT+TGG | + | chr1_3:59827050-59827069 | None:intergenic | 35.0% |
| ! | CTGAATACCGGGTAAATTTT+TGG | - | chr1_3:59827137-59827156 | Msa0129760:intron | 35.0% |
| ! | TGTGCAATTGTTTTCATGCT+TGG | - | chr1_3:59827539-59827558 | Msa0129760:CDS | 35.0% |
| TAAGTATGTGACGACTATCT+GGG | + | chr1_3:59827719-59827738 | None:intergenic | 35.0% | |
| TTCAGTTGCGTTTAACAGTT+TGG | - | chr1_3:59827751-59827770 | Msa0129760:intron | 35.0% | |
| ! | CACAGACTAGTTAAATTCAG+TGG | + | chr1_3:59828117-59828136 | None:intergenic | 35.0% |
| CGGTTTGAATTGAGATAGAA+TGG | + | chr1_3:59828164-59828183 | None:intergenic | 35.0% | |
| TCATACCATTGTTTGAGAAG+TGG | - | chr1_3:59828252-59828271 | Msa0129760:intron | 35.0% | |
| TTCAACCACTTCTCAAACAA+TGG | + | chr1_3:59828260-59828279 | None:intergenic | 35.0% | |
| TGTTTGAGAAGTGGTTGAAA+TGG | - | chr1_3:59828261-59828280 | Msa0129760:intron | 35.0% | |
| AGAATATATTCCCTTACCTC+AGG | - | chr1_3:59828322-59828341 | Msa0129760:intron | 35.0% | |
| TTGTTTCCTTCCTACAAGAT+TGG | - | chr1_3:59828542-59828561 | Msa0129760:intron | 35.0% | |
| ! | ACACCTCTAAAGGAAATGTT+AGG | - | chr1_3:59828663-59828682 | Msa0129760:intron | 35.0% |
| ! | CACCTCTAAAGGAAATGTTA+GGG | - | chr1_3:59828664-59828683 | Msa0129760:intron | 35.0% |
| ! | ATTGTTCTTGCATCTAGGAT+TGG | + | chr1_3:59828691-59828710 | None:intergenic | 35.0% |
| TGTACACCATACGTAATTGA+TGG | + | chr1_3:59828742-59828761 | None:intergenic | 35.0% | |
| GAAATGGGGGCTTAAAAAAA+AGG | + | chr1_3:59828784-59828803 | None:intergenic | 35.0% | |
| TAGAGTCTTACAAGGGAAAT+GGG | + | chr1_3:59828799-59828818 | None:intergenic | 35.0% | |
| ATAGAGTCTTACAAGGGAAA+TGG | + | chr1_3:59828800-59828819 | None:intergenic | 35.0% | |
| ATTTCCCTTGTAAGACTCTA+TGG | - | chr1_3:59828799-59828818 | Msa0129760:intron | 35.0% | |
| GAAGAGCAAAATAGAGAGAT+GGG | - | chr1_3:59829066-59829085 | Msa0129760:intron | 35.0% | |
| AAGAGCAAAATAGAGAGATG+GGG | - | chr1_3:59829067-59829086 | Msa0129760:intron | 35.0% | |
| !! | CCAGTAATTTCGAGTTTGAT+TGG | + | chr1_3:59829184-59829203 | None:intergenic | 35.0% |
| CCAATCAAACTCGAAATTAC+TGG | - | chr1_3:59829181-59829200 | Msa0129760:intron | 35.0% | |
| GTGATATACCAGTAAGTAAC+TGG | + | chr1_3:59829221-59829240 | None:intergenic | 35.0% | |
| GGTATATCACCCATAATGTT+TGG | - | chr1_3:59829231-59829250 | Msa0129760:intron | 35.0% | |
| TCTGTTGACCCAAACATTAT+GGG | + | chr1_3:59829243-59829262 | None:intergenic | 35.0% | |
| ATCTGTTGACCCAAACATTA+TGG | + | chr1_3:59829244-59829263 | None:intergenic | 35.0% | |
| GTTCTAATCTATTCTCCAGA+CGG | - | chr1_3:59829602-59829621 | Msa0129760:intron | 35.0% | |
| ! | CAAGCATATGAAAGTGGATT+AGG | - | chr1_3:59829644-59829663 | Msa0129760:intron | 35.0% |
| GAGTCCTGAATCATTTAACT+TGG | - | chr1_3:59829735-59829754 | Msa0129760:intron | 35.0% | |
| TGAAAACAGCAGCATAACAA+GGG | + | chr1_3:59829802-59829821 | None:intergenic | 35.0% | |
| TTGAAAACAGCAGCATAACA+AGG | + | chr1_3:59829803-59829822 | None:intergenic | 35.0% | |
| ! | TTGAGCGATGATTTTTCTCA+AGG | - | chr1_3:59829945-59829964 | Msa0129760:CDS | 35.0% |
| AAACGAAGGAATGTGTTTCA+TGG | + | chr1_3:59830133-59830152 | None:intergenic | 35.0% | |
| ACCTCATACCTTACTCTAAA+GGG | + | chr1_3:59830194-59830213 | None:intergenic | 35.0% | |
| TTGCATTATGTAGCAAGGAA+GGG | + | chr1_3:59830330-59830349 | None:intergenic | 35.0% | |
| ATTGCATTATGTAGCAAGGA+AGG | + | chr1_3:59830331-59830350 | None:intergenic | 35.0% | |
| GATCATTGCATTATGTAGCA+AGG | + | chr1_3:59830335-59830354 | None:intergenic | 35.0% | |
| ATAATGCAATGATCACTCCA+GGG | - | chr1_3:59830341-59830360 | Msa0129760:intron | 35.0% | |
| AGGTTTACGCTAAACATGAA+AGG | + | chr1_3:59830532-59830551 | None:intergenic | 35.0% | |
| AAAGTGTATTGCAGAAACCA+AGG | + | chr1_3:59830722-59830741 | None:intergenic | 35.0% | |
| GTTTCTGCAATACACTTTGA+TGG | - | chr1_3:59830724-59830743 | Msa0129760:intron | 35.0% | |
| CCAAATGATTCAGTTTGTCT+AGG | + | chr1_3:59830793-59830812 | None:intergenic | 35.0% | |
| CCTAGACAAACTGAATCATT+TGG | - | chr1_3:59830790-59830809 | Msa0129760:intron | 35.0% | |
| !!! | TTCTTGCAGGTTTTTTGTCA+TGG | - | chr1_3:59830890-59830909 | Msa0129760:intron | 35.0% |
| CATTGCGAGTACATATGTAT+TGG | + | chr1_3:59830927-59830946 | None:intergenic | 35.0% | |
| CATGTATAAATGTGTGCTTC+CGG | + | chr1_3:59831076-59831095 | None:intergenic | 35.0% | |
| GAAGCACACATTTATACATG+TGG | - | chr1_3:59831076-59831095 | Msa0129760:intron | 35.0% | |
| TAGAGGAACATGAACACAAA+AGG | + | chr1_3:59831115-59831134 | None:intergenic | 35.0% | |
| GTTATCGAAAATTGTGGTAG+AGG | + | chr1_3:59831132-59831151 | None:intergenic | 35.0% | |
| AGGTCTGTTATCGAAAATTG+TGG | + | chr1_3:59831138-59831157 | None:intergenic | 35.0% | |
| TTGTCTGCTTCTTAAGGATA+AGG | - | chr1_3:59831179-59831198 | Msa0129760:intron | 35.0% | |
| TCACTAGATTCTGGCAATAA+GGG | + | chr1_3:59831228-59831247 | None:intergenic | 35.0% | |
| TTCACTAGATTCTGGCAATA+AGG | + | chr1_3:59831229-59831248 | None:intergenic | 35.0% | |
| GAGCTATATTCACTAGATTC+TGG | + | chr1_3:59831237-59831256 | None:intergenic | 35.0% | |
| CTATCTTTATCTTTGTGCAC+CGG | - | chr1_3:59831310-59831329 | Msa0129760:intron | 35.0% | |
| TATCTTTATCTTTGTGCACC+GGG | - | chr1_3:59831311-59831330 | Msa0129760:intron | 35.0% | |
| ! | GAAACCTTTCGTTTTGCATT+TGG | - | chr1_3:59831493-59831512 | Msa0129760:five_prime_UTR | 35.0% |
| TTTCCCAAATGCAAAACGAA+AGG | + | chr1_3:59831500-59831519 | None:intergenic | 35.0% | |
| ACCGAATCATTGTTAGAGTT+TGG | + | chr1_3:59831680-59831699 | None:intergenic | 35.0% | |
| ! | AAACTCTAACAATGATTCGG+TGG | - | chr1_3:59831679-59831698 | Msa0129760:five_prime_UTR | 35.0% |
| TAATGTGAGTGAGTGCAGTT+TGG | + | chr1_3:59826181-59826200 | None:intergenic | 40.0% | |
| TCGTGACACTCTTTCTTTCA+AGG | - | chr1_3:59826395-59826414 | Msa0129760:three_prime_UTR | 40.0% | |
| ! | CGTACCCGAGACTTTATTTA+AGG | + | chr1_3:59826507-59826526 | None:intergenic | 40.0% |
| TACCGAGCTTGAAATATGGA+TGG | - | chr1_3:59827023-59827042 | Msa0129760:intron | 40.0% | |
| GACCATCCATATTTCAAGCT+CGG | + | chr1_3:59827028-59827047 | None:intergenic | 40.0% | |
| TGTGTCAAATTGTCAACTGC+AGG | - | chr1_3:59827089-59827108 | Msa0129760:intron | 40.0% | |
| GTCTAGGTTTAATGTGCCAT+AGG | - | chr1_3:59827415-59827434 | Msa0129760:intron | 40.0% | |
| AACAATTGCACAACCTGCAT+AGG | + | chr1_3:59827531-59827550 | None:intergenic | 40.0% | |
| GAGGATGTACTCAGAATCAA+GGG | + | chr1_3:59827589-59827608 | None:intergenic | 40.0% | |
| AGAGGATGTACTCAGAATCA+AGG | + | chr1_3:59827590-59827609 | None:intergenic | 40.0% | |
| AAAAGCCAATGATACAGGCT+TGG | - | chr1_3:59827622-59827641 | Msa0129760:intron | 40.0% | |
| GTAAGTATGTGACGACTATC+TGG | + | chr1_3:59827720-59827739 | None:intergenic | 40.0% | |
| AGTTTGGTCACTGGTAAACA+CGG | - | chr1_3:59827767-59827786 | Msa0129760:intron | 40.0% | |
| TTGCCAAAGCATGCTTCTAA+GGG | - | chr1_3:59827807-59827826 | Msa0129760:CDS | 40.0% | |
| AATTTGCAGCGATTTGCACA+AGG | - | chr1_3:59827853-59827872 | Msa0129760:intron | 40.0% | |
| GGATTCACCACTTGATTACA+AGG | - | chr1_3:59828004-59828023 | Msa0129760:CDS | 40.0% | |
| GTAGCTACCTTGTAATCAAG+TGG | + | chr1_3:59828014-59828033 | None:intergenic | 40.0% | |
| GAGGGCTAGGAAAGAAAAAT+AGG | + | chr1_3:59828050-59828069 | None:intergenic | 40.0% | |
| TTATGTTTACCAAGTCTCCC+AGG | + | chr1_3:59828077-59828096 | None:intergenic | 40.0% | |
| ATAGAATGGACCTGAGGTAA+GGG | + | chr1_3:59828335-59828354 | None:intergenic | 40.0% | |
| AATAGGATAGAATGGACCTG+AGG | + | chr1_3:59828341-59828360 | None:intergenic | 40.0% | |
| GACCCTAACATTTCCTTTAG+AGG | + | chr1_3:59828669-59828688 | None:intergenic | 40.0% | |
| TTACGTATGGTGTACACCTT+TGG | - | chr1_3:59828746-59828765 | Msa0129760:intron | 40.0% | |
| TACGTATGGTGTACACCTTT+GGG | - | chr1_3:59828747-59828766 | Msa0129760:intron | 40.0% | |
| AGAGTCTTACAAGGGAAATG+GGG | + | chr1_3:59828798-59828817 | None:intergenic | 40.0% | |
| TGAGCCATAGAGTCTTACAA+GGG | + | chr1_3:59828806-59828825 | None:intergenic | 40.0% | |
| TTGAGCCATAGAGTCTTACA+AGG | + | chr1_3:59828807-59828826 | None:intergenic | 40.0% | |
| ! | CCTTGATGGCAAATATGTGA+AGG | + | chr1_3:59828834-59828853 | None:intergenic | 40.0% |
| CCTTCACATATTTGCCATCA+AGG | - | chr1_3:59828831-59828850 | Msa0129760:intron | 40.0% | |
| CACATATTTGCCATCAAGGT+TGG | - | chr1_3:59828835-59828854 | Msa0129760:intron | 40.0% | |
| !!! | GGATTTTTTGCCAACCTTGA+TGG | + | chr1_3:59828848-59828867 | None:intergenic | 40.0% |
| ! | TCCTCTCTTTCGAGTAACAA+CGG | + | chr1_3:59828951-59828970 | None:intergenic | 40.0% |
| AGAGGATACAATCAACTCAG+TGG | - | chr1_3:59828965-59828984 | Msa0129760:intron | 40.0% | |
| GGAAGAGCAAAATAGAGAGA+TGG | - | chr1_3:59829065-59829084 | Msa0129760:intron | 40.0% | |
| ATGAATGACCAATAGAGGAG+AGG | + | chr1_3:59829157-59829176 | None:intergenic | 40.0% | |
| GAGAGATGAATGACCAATAG+AGG | + | chr1_3:59829162-59829181 | None:intergenic | 40.0% | |
| ACGTTGAACCAGTTACTTAC+TGG | - | chr1_3:59829210-59829229 | Msa0129760:intron | 40.0% | |
| TAATCTATTCTCCAGACGGA+AGG | - | chr1_3:59829606-59829625 | Msa0129760:intron | 40.0% | |
| ! | TAGGAGTTAAAAGTGTGTCG+TGG | - | chr1_3:59829663-59829682 | Msa0129760:intron | 40.0% |
| ATCCACTTCCTGCAATTTCA+GGG | + | chr1_3:59829892-59829911 | None:intergenic | 40.0% | |
| ! | TCTGACATATCAAGTTGCAG+AGG | + | chr1_3:59829918-59829937 | None:intergenic | 40.0% |
| !! | AAACTTTTTCCTGCCAAGAC+GGG | + | chr1_3:59830033-59830052 | None:intergenic | 40.0% |
| !! | GAAACTTTTTCCTGCCAAGA+CGG | + | chr1_3:59830034-59830053 | None:intergenic | 40.0% |
| !! | ACCCTTTAGAGTAAGGTATG+AGG | - | chr1_3:59830190-59830209 | Msa0129760:CDS | 40.0% |
| GACCTCATACCTTACTCTAA+AGG | + | chr1_3:59830195-59830214 | None:intergenic | 40.0% | |
| TAGAGTAAGGTATGAGGTCA+TGG | - | chr1_3:59830196-59830215 | Msa0129760:CDS | 40.0% | |
| !! | AGCTTACCGATTCCTTGTTT+GGG | + | chr1_3:59830272-59830291 | None:intergenic | 40.0% |
| CATAATGCAATGATCACTCC+AGG | - | chr1_3:59830340-59830359 | Msa0129760:intron | 40.0% | |
| ! | AAGGCTTTGATTAAGTCCAG+AGG | + | chr1_3:59830819-59830838 | None:intergenic | 40.0% |
| ATAGTATGCCTACAGTACTC+TGG | - | chr1_3:59830947-59830966 | Msa0129760:intron | 40.0% | |
| TAGTATGCCTACAGTACTCT+GGG | - | chr1_3:59830948-59830967 | Msa0129760:intron | 40.0% | |
| TACAGCAATCTTAGTGCAGA+AGG | - | chr1_3:59830996-59831015 | Msa0129760:intron | 40.0% | |
| TTTCGATAACAGACCTGAAG+TGG | - | chr1_3:59831142-59831161 | Msa0129760:intron | 40.0% | |
| TGCAAAACGAAAGGTTTCAC+TGG | + | chr1_3:59831491-59831510 | None:intergenic | 40.0% | |
| GCATTGGGAGAGAAAGAAGA+AGG | + | chr1_3:59826336-59826355 | None:intergenic | 45.0% | |
| ACGGCTAAGAAACGAGCATT+GGG | + | chr1_3:59826351-59826370 | None:intergenic | 45.0% | |
| !! | AAAGAGTGTCACGAATGACG+AGG | + | chr1_3:59826389-59826408 | None:intergenic | 45.0% |
| GATCTGAGTGAAACTTGACG+CGG | - | chr1_3:59826478-59826497 | Msa0129760:three_prime_UTR | 45.0% | |
| ! | ACGAGCCTTTTGGATGGAAA+TGG | - | chr1_3:59826524-59826543 | Msa0129760:CDS | 45.0% |
| TGAAAGAGCAACCCCACTAA+TGG | - | chr1_3:59826558-59826577 | Msa0129760:CDS | 45.0% | |
| GAAAGAGCAACCCCACTAAT+GGG | - | chr1_3:59826559-59826578 | Msa0129760:CDS | 45.0% | |
| TGGATTTGCGGCAATACTTG+TGG | - | chr1_3:59826829-59826848 | Msa0129760:CDS | 45.0% | |
| GTCAGCACATCTGTGTTTGT+TGG | + | chr1_3:59827061-59827080 | None:intergenic | 45.0% | |
| TTGTCAACTGCAGGCAATCT+TGG | - | chr1_3:59827098-59827117 | Msa0129760:intron | 45.0% | |
| !! | TGGTCAGCAGTTCTGAATAC+CGG | - | chr1_3:59827125-59827144 | Msa0129760:intron | 45.0% |
| TCATTCTTTCCGTCCTATGC+AGG | - | chr1_3:59827515-59827534 | Msa0129760:CDS | 45.0% | |
| ATTGCACAACCTGCATAGGA+CGG | + | chr1_3:59827527-59827546 | None:intergenic | 45.0% | |
| GATTCTGAGTACATCCTCTG+CGG | - | chr1_3:59827591-59827610 | Msa0129760:intron | 45.0% | |
| ! | GCTTTTTATAGAGACCGCAG+AGG | + | chr1_3:59827608-59827627 | None:intergenic | 45.0% |
| AGTGACCAAGCCTGTATCAT+TGG | + | chr1_3:59827630-59827649 | None:intergenic | 45.0% | |
| TCTATCTTGCATGTCCACTC+TGG | + | chr1_3:59827660-59827679 | None:intergenic | 45.0% | |
| TGGACATGCAAGATAGACGA+AGG | - | chr1_3:59827663-59827682 | Msa0129760:intron | 45.0% | |
| CTAGCATATGCAATACCAGC+AGG | + | chr1_3:59827690-59827709 | None:intergenic | 45.0% | |
| CTGCTGGTATTGCATATGCT+AGG | - | chr1_3:59827688-59827707 | Msa0129760:intron | 45.0% | |
| CTGGTATTGCATATGCTAGG+TGG | - | chr1_3:59827691-59827710 | Msa0129760:intron | 45.0% | |
| GCGTTTAACAGTTTGGTCAC+TGG | - | chr1_3:59827758-59827777 | Msa0129760:intron | 45.0% | |
| GTTGCCAAAGCATGCTTCTA+AGG | - | chr1_3:59827806-59827825 | Msa0129760:CDS | 45.0% | |
| TGCCAAAGCATGCTTCTAAG+GGG | - | chr1_3:59827808-59827827 | Msa0129760:CDS | 45.0% | |
| GGGGTTTCCTTTACAAGAGA+TGG | - | chr1_3:59827828-59827847 | Msa0129760:CDS | 45.0% | |
| TGCTGTTGACACTCTAGACT+TGG | - | chr1_3:59827938-59827957 | Msa0129760:intron | 45.0% | |
| TAGACTTGGCTGATGTCGAA+TGG | - | chr1_3:59827952-59827971 | Msa0129760:CDS | 45.0% | |
| TTTCCTAGCCCTCTTAACCT+GGG | - | chr1_3:59828057-59828076 | Msa0129760:CDS | 45.0% | |
| GATAGAATGGACCTGAGGTA+AGG | + | chr1_3:59828336-59828355 | None:intergenic | 45.0% | |
| ! | GCAGATACGAGCTTTTAGTG+AGG | + | chr1_3:59828505-59828524 | None:intergenic | 45.0% |
| TCCTTCCTACAAGATTGGAC+CGG | - | chr1_3:59828547-59828566 | Msa0129760:intron | 45.0% | |
| GTGACATGGTAAGTTGCCAT+TGG | + | chr1_3:59828573-59828592 | None:intergenic | 45.0% | |
| GCAGTGCCATCAATTACGTA+TGG | - | chr1_3:59828733-59828752 | Msa0129760:intron | 45.0% | |
| AAGGATATTTGGCCTCCCAA+AGG | + | chr1_3:59828765-59828784 | None:intergenic | 45.0% | |
| GAGTCTTACAAGGGAAATGG+GGG | + | chr1_3:59828797-59828816 | None:intergenic | 45.0% | |
| GACATTGTAGGTTGCAGTGA+CGG | + | chr1_3:59828869-59828888 | None:intergenic | 45.0% | |
| ACCGTTGTTACTCGAAAGAG+AGG | - | chr1_3:59828947-59828966 | Msa0129760:intron | 45.0% | |
| GAGAGATGGGGAGATAGTAT+AGG | - | chr1_3:59829079-59829098 | Msa0129760:intron | 45.0% | |
| CTCATAGTCCTCTCCTCTAT+TGG | - | chr1_3:59829146-59829165 | Msa0129760:intron | 45.0% | |
| AGCTTCACTGAGCTATGATC+AGG | - | chr1_3:59829306-59829325 | Msa0129760:intron | 45.0% | |
| GCTTCACTGAGCTATGATCA+GGG | - | chr1_3:59829307-59829326 | Msa0129760:intron | 45.0% | |
| CTTCACTGAGCTATGATCAG+GGG | - | chr1_3:59829308-59829327 | Msa0129760:intron | 45.0% | |
| TCAACGGACATGAGAGTCAA+TGG | - | chr1_3:59829339-59829358 | Msa0129760:intron | 45.0% | |
| GACATGAGAGTCAATGGACA+GGG | - | chr1_3:59829345-59829364 | Msa0129760:intron | 45.0% | |
| ACATGAGAGTCAATGGACAG+GGG | - | chr1_3:59829346-59829365 | Msa0129760:intron | 45.0% | |
| TTGAAAAGACACCTTCCGTC+TGG | + | chr1_3:59829620-59829639 | None:intergenic | 45.0% | |
| TACCATGTCCCTGAAATTGC+AGG | - | chr1_3:59829881-59829900 | Msa0129760:CDS | 45.0% | |
| TTCCTGCAATTTCAGGGACA+TGG | + | chr1_3:59829886-59829905 | None:intergenic | 45.0% | |
| CATCCACTTCCTGCAATTTC+AGG | + | chr1_3:59829893-59829912 | None:intergenic | 45.0% | |
| ! | CTTACTCTAAAGGGTCGTTC+TGG | + | chr1_3:59830185-59830204 | None:intergenic | 45.0% |
| !! | CAGAACGACCCTTTAGAGTA+AGG | - | chr1_3:59830183-59830202 | Msa0129760:CDS | 45.0% |
| GAGAAACCTAACCCCAAACA+AGG | - | chr1_3:59830257-59830276 | Msa0129760:intron | 45.0% | |
| CCTAACCCCAAACAAGGAAT+CGG | - | chr1_3:59830263-59830282 | Msa0129760:intron | 45.0% | |
| !! | GCTTACCGATTCCTTGTTTG+GGG | + | chr1_3:59830271-59830290 | None:intergenic | 45.0% |
| !! | CAGCTTACCGATTCCTTGTT+TGG | + | chr1_3:59830273-59830292 | None:intergenic | 45.0% |
| AGCATGAGATAGAGCAGATC+TGG | - | chr1_3:59830464-59830483 | Msa0129760:intron | 45.0% | |
| CTGAATCATTTGGTTGCCTC+TGG | - | chr1_3:59830800-59830819 | Msa0129760:intron | 45.0% | |
| !! | TTCCATACCCAGAGTACTGT+AGG | + | chr1_3:59830958-59830977 | None:intergenic | 45.0% |
| AAAACAAGGCGAGTGGATGT+CGG | + | chr1_3:59831048-59831067 | None:intergenic | 45.0% | |
| TTATACATGTGGACCCCATC+TGG | - | chr1_3:59831087-59831106 | Msa0129760:intron | 45.0% | |
| !! | AACACAAAAGGCACCAGATG+GGG | + | chr1_3:59831103-59831122 | None:intergenic | 45.0% |
| !! | GAACACAAAAGGCACCAGAT+GGG | + | chr1_3:59831104-59831123 | None:intergenic | 45.0% |
| !! | TGAACACAAAAGGCACCAGA+TGG | + | chr1_3:59831105-59831124 | None:intergenic | 45.0% |
| GACCTGAAGTGGAATTCTGA+TGG | - | chr1_3:59831153-59831172 | Msa0129760:intron | 45.0% | |
| TGCCATCAGAATTCCACTTC+AGG | + | chr1_3:59831158-59831177 | None:intergenic | 45.0% | |
| TGGCAGTTGTCTGCTTCTTA+AGG | - | chr1_3:59831173-59831192 | Msa0129760:intron | 45.0% | |
| TTTATCTTTGTGCACCGGGT+AGG | - | chr1_3:59831315-59831334 | Msa0129760:intron | 45.0% | |
| CTTAGCTACACTTACCTACC+CGG | + | chr1_3:59831332-59831351 | None:intergenic | 45.0% | |
| AAACAGGAGAGACACTCTCA+TGG | + | chr1_3:59831396-59831415 | None:intergenic | 45.0% | |
| ! | AGAGTGTCTCTCCTGTTTGT+TGG | - | chr1_3:59831398-59831417 | Msa0129760:CDS | 45.0% |
| GAGTGTCTCTCCTGTTTGTT+GGG | - | chr1_3:59831399-59831418 | Msa0129760:CDS | 45.0% | |
| GCATATCCTACCCAACAAAC+AGG | + | chr1_3:59831412-59831431 | None:intergenic | 45.0% | |
| GACGGCTAAGAAACGAGCAT+TGG | + | chr1_3:59826352-59826371 | None:intergenic | 50.0% | |
| GAGGCGATAATCAACTGCGA+CGG | + | chr1_3:59826370-59826389 | None:intergenic | 50.0% | |
| TCACGCAGTCAGCATATCTG+TGG | - | chr1_3:59826933-59826952 | Msa0129760:intron | 50.0% | |
| GTGGCCGTTGGATTGAAGAT+CGG | - | chr1_3:59826952-59826971 | Msa0129760:intron | 50.0% | |
| CCGTCCGATCTTCAATCCAA+CGG | + | chr1_3:59826959-59826978 | None:intergenic | 50.0% | |
| CCGTTGGATTGAAGATCGGA+CGG | - | chr1_3:59826956-59826975 | Msa0129760:intron | 50.0% | |
| CTGCAGGCAATCTTGGTTCA+TGG | - | chr1_3:59827105-59827124 | Msa0129760:intron | 50.0% | |
| !! | GGTCAGCAGTTCTGAATACC+GGG | - | chr1_3:59827126-59827145 | Msa0129760:intron | 50.0% |
| AAGATAGACGAAGGTCCTGC+TGG | - | chr1_3:59827672-59827691 | Msa0129760:intron | 50.0% | |
| AAGCATGCTTTGGCAACTGC+AGG | + | chr1_3:59827803-59827822 | None:intergenic | 50.0% | |
| ! | GCCAAAGCATGCTTCTAAGG+GGG | - | chr1_3:59827809-59827828 | Msa0129760:CDS | 50.0% |
| ! | ACCCCCTTAGAAGCATGCTT+TGG | + | chr1_3:59827813-59827832 | None:intergenic | 50.0% |
| CTTTCCTAGCCCTCTTAACC+TGG | - | chr1_3:59828056-59828075 | Msa0129760:CDS | 50.0% | |
| CCAAGTCTCCCAGGTTAAGA+GGG | + | chr1_3:59828068-59828087 | None:intergenic | 50.0% | |
| ACCAAGTCTCCCAGGTTAAG+AGG | + | chr1_3:59828069-59828088 | None:intergenic | 50.0% | |
| ATTGGCCGGTCCAATCTTGT+AGG | + | chr1_3:59828555-59828574 | None:intergenic | 50.0% | |
| TACAAGATTGGACCGGCCAA+TGG | - | chr1_3:59828554-59828573 | Msa0129760:intron | 50.0% | |
| CATGGTAAGTTGCCATTGGC+CGG | + | chr1_3:59828569-59828588 | None:intergenic | 50.0% | |
| GTATGGTGTACACCTTTGGG+AGG | - | chr1_3:59828750-59828769 | Msa0129760:intron | 50.0% | |
| ACTGAGCTATGATCAGGGGA+AGG | - | chr1_3:59829312-59829331 | Msa0129760:intron | 50.0% | |
| ATCAGGGGAAGGAGAGTCAA+CGG | - | chr1_3:59829323-59829342 | Msa0129760:intron | 50.0% | |
| GGACATGAGAGTCAATGGAC+AGG | - | chr1_3:59829344-59829363 | Msa0129760:intron | 50.0% | |
| ACTGCCAGAAACTGACCACA+GGG | + | chr1_3:59829692-59829711 | None:intergenic | 50.0% | |
| !! | TGTGGTCAGTTTCTGGCAGT+GGG | - | chr1_3:59829692-59829711 | Msa0129760:intron | 50.0% |
| GTCCCTGAAATTGCAGGAAG+TGG | - | chr1_3:59829887-59829906 | Msa0129760:CDS | 50.0% | |
| !! | CTGTTTTGAACGACCCGTCT+TGG | - | chr1_3:59830017-59830036 | Msa0129760:CDS | 50.0% |
| !! | AAGGGTCGTTCTGGAGAATC+TGG | + | chr1_3:59830176-59830195 | None:intergenic | 50.0% |
| ! | TCAGCAGGAGGCTTCTGAAA+TGG | + | chr1_3:59830239-59830258 | None:intergenic | 50.0% |
| TTGGGGTTAGGTTTCTCAGC+AGG | + | chr1_3:59830254-59830273 | None:intergenic | 50.0% | |
| ! | CCGATTCCTTGTTTGGGGTT+AGG | + | chr1_3:59830266-59830285 | None:intergenic | 50.0% |
| CGTGCAAAGCTAGTGACAGA+AGG | + | chr1_3:59830838-59830857 | None:intergenic | 50.0% | |
| !! | CTGTCACTAGCTTTGCACGA+TGG | - | chr1_3:59830839-59830858 | Msa0129760:intron | 50.0% |
| ! | TAGCTTTGCACGATGGCTCT+TGG | - | chr1_3:59830846-59830865 | Msa0129760:intron | 50.0% |
| TGCCTACAGTACTCTGGGTA+TGG | - | chr1_3:59830953-59830972 | Msa0129760:intron | 50.0% | |
| CGGGTAGGTAAGTGTAGCTA+AGG | - | chr1_3:59831330-59831349 | Msa0129760:intron | 50.0% | |
| ! | GTCTCTCCTGTTTGTTGGGT+AGG | - | chr1_3:59831403-59831422 | Msa0129760:CDS | 50.0% |
| ! | AGTCTCGGGTACGAGCCTTT+TGG | - | chr1_3:59826514-59826533 | Msa0129760:CDS | 55.0% |
| ! | TCGGGTACGAGCCTTTTGGA+TGG | - | chr1_3:59826518-59826537 | Msa0129760:CDS | 55.0% |
| GTCAGCATATCTGTGGCCGT+TGG | - | chr1_3:59826940-59826959 | Msa0129760:intron | 55.0% | |
| CTTGCATGTCCACTCTGGCT+GGG | + | chr1_3:59827655-59827674 | None:intergenic | 55.0% | |
| TCTTGCATGTCCACTCTGGC+TGG | + | chr1_3:59827656-59827675 | None:intergenic | 55.0% | |
| TCTCCCAGGTTAAGAGGGCT+AGG | + | chr1_3:59828063-59828082 | None:intergenic | 55.0% | |
| CCCTCTTAACCTGGGAGACT+TGG | - | chr1_3:59828065-59828084 | Msa0129760:CDS | 55.0% | |
| GCCGGTCCAATCTTGTAGGA+AGG | + | chr1_3:59828551-59828570 | None:intergenic | 55.0% | |
| GAGAGTCAATGGACAGGGGA+AGG | - | chr1_3:59829350-59829369 | Msa0129760:intron | 55.0% | |
| GTCAATGGACAGGGGAAGGA+AGG | - | chr1_3:59829354-59829373 | Msa0129760:intron | 55.0% | |
| GTCTCCCTGTGGTCAGTTTC+TGG | - | chr1_3:59829685-59829704 | Msa0129760:intron | 55.0% | |
| CACTGCCAGAAACTGACCAC+AGG | + | chr1_3:59829693-59829712 | None:intergenic | 55.0% | |
| !! | CTGTGGTCAGTTTCTGGCAG+TGG | - | chr1_3:59829691-59829710 | Msa0129760:intron | 55.0% |
| GATTCAGGACTCGCAGCATC+TGG | + | chr1_3:59829727-59829746 | None:intergenic | 55.0% | |
| CTGCATCCATATGCAGTCCG+TGG | - | chr1_3:59829776-59829795 | Msa0129760:CDS | 55.0% | |
| CAGCAGCATAACAAGGGCCA+CGG | + | chr1_3:59829796-59829815 | None:intergenic | 55.0% | |
| TTTGAACGACCCGTCTTGGC+AGG | - | chr1_3:59830021-59830040 | Msa0129760:CDS | 55.0% | |
| GGGTTAGGTTTCTCAGCAGG+AGG | + | chr1_3:59830251-59830270 | None:intergenic | 55.0% | |
| GCAGAAGGACCCTATCAGAG+TGG | - | chr1_3:59831011-59831030 | Msa0129760:intron | 55.0% | |
| ACCCTATCAGAGTGGCAGCT+TGG | - | chr1_3:59831019-59831038 | Msa0129760:intron | 55.0% | |
| CCCAAGCTGCCACTCTGATA+GGG | + | chr1_3:59831023-59831042 | None:intergenic | 55.0% | |
| CCCTATCAGAGTGGCAGCTT+GGG | - | chr1_3:59831020-59831039 | Msa0129760:intron | 55.0% | |
| TCCCAAGCTGCCACTCTGAT+AGG | + | chr1_3:59831024-59831043 | None:intergenic | 55.0% | |
| AGTGTGTCGTGGTCTCCCTG+TGG | - | chr1_3:59829674-59829693 | Msa0129760:intron | 60.0% | |
| ! | CAAGGGCCACGGACTGCATA+TGG | + | chr1_3:59829785-59829804 | None:intergenic | 60.0% |
| GGTCACTGACCCAGCCAGAG+TGG | - | chr1_3:59827643-59827662 | Msa0129760:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 59826068 | 59831706 | 59826068 | ID=Msa0129760;Name=Msa0129760 |
| chr1_3 | mRNA | 59826068 | 59831706 | 59826068 | ID=Msa0129760-mRNA-1;Parent=Msa0129760;Name=Msa0129760-mRNA-1;_AED=0.01;_eAED=0.01;_QI=232|1|1|1|1|1|6|440|458 |
| chr1_3 | exon | 59826068 | 59826875 | 59826068 | ID=Msa0129760-mRNA-1:exon:19587;Parent=Msa0129760-mRNA-1 |
| chr1_3 | exon | 59827490 | 59827597 | 59827490 | ID=Msa0129760-mRNA-1:exon:19586;Parent=Msa0129760-mRNA-1 |
| chr1_3 | exon | 59827799 | 59827871 | 59827799 | ID=Msa0129760-mRNA-1:exon:19585;Parent=Msa0129760-mRNA-1 |
| chr1_3 | exon | 59827951 | 59828172 | 59827951 | ID=Msa0129760-mRNA-1:exon:19584;Parent=Msa0129760-mRNA-1 |
| chr1_3 | exon | 59829749 | 59830237 | 59829749 | ID=Msa0129760-mRNA-1:exon:19583;Parent=Msa0129760-mRNA-1 |
| chr1_3 | exon | 59831358 | 59831706 | 59831358 | ID=Msa0129760-mRNA-1:exon:19582;Parent=Msa0129760-mRNA-1 |
| chr1_3 | five_prime_UTR | 59831475 | 59831706 | 59831475 | ID=Msa0129760-mRNA-1:five_prime_utr;Parent=Msa0129760-mRNA-1 |
| chr1_3 | CDS | 59831358 | 59831474 | 59831358 | ID=Msa0129760-mRNA-1:cds;Parent=Msa0129760-mRNA-1 |
| chr1_3 | CDS | 59829749 | 59830237 | 59829749 | ID=Msa0129760-mRNA-1:cds;Parent=Msa0129760-mRNA-1 |
| chr1_3 | CDS | 59827951 | 59828172 | 59827951 | ID=Msa0129760-mRNA-1:cds;Parent=Msa0129760-mRNA-1 |
| chr1_3 | CDS | 59827799 | 59827871 | 59827799 | ID=Msa0129760-mRNA-1:cds;Parent=Msa0129760-mRNA-1 |
| chr1_3 | CDS | 59827490 | 59827597 | 59827490 | ID=Msa0129760-mRNA-1:cds;Parent=Msa0129760-mRNA-1 |
| chr1_3 | CDS | 59826508 | 59826875 | 59826508 | ID=Msa0129760-mRNA-1:cds;Parent=Msa0129760-mRNA-1 |
| chr1_3 | three_prime_UTR | 59826068 | 59826507 | 59826068 | ID=Msa0129760-mRNA-1:three_prime_utr;Parent=Msa0129760-mRNA-1 |
| Gene Sequence |
| Protein sequence |
