AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1435110

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1435110 MtrunA17_Chr3g0136511 95.552 562 9 1 1 546 1 562 0.0 1104
Msa1435110 MtrunA17_Chr4g0033711 41.132 530 281 8 9 521 16 531 4.84e-124 376
Msa1435110 MtrunA17_Chr1g0157471 33.159 383 205 12 10 356 15 382 6.02e-43 159
Msa1435110 MtrunA17_Chr3g0133771 27.011 348 203 14 10 336 5 322 1.85e-18 86.7
Msa1435110 MtrunA17_Chr8g0348131 33.333 177 96 5 352 519 65 228 2.29e-13 70.5
Msa1435110 MtrunA17_Chr2g0314601 28.571 245 134 10 1 215 1 234 2.02e-12 70.1
Msa1435110 MtrunA17_Chr4g0005701 30.319 188 115 4 362 542 18 196 2.07e-12 66.6
Msa1435110 MtrunA17_Chr8g0387631 30.851 188 103 5 362 540 69 238 2.94e-12 67.0
Msa1435110 MtrunA17_Chr8g0359401 28.163 245 135 10 1 215 1 234 1.12e-11 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1435110 AT2G26260.1 66.011 559 172 2 2 544 5 561 0.0 782
Msa1435110 AT2G26260.2 66.102 472 142 2 89 544 1 470 0.0 659
Msa1435110 AT1G47290.2 63.758 447 126 4 6 433 9 438 0.0 596
Msa1435110 AT1G47290.1 70.055 364 93 1 6 353 9 372 0.0 554
Msa1435110 AT2G43420.1 39.170 554 303 8 9 539 15 557 7.15e-129 388
Msa1435110 AT2G33630.1 30.971 381 214 10 10 356 15 380 3.01e-38 147
Msa1435110 AT4G33360.1 26.027 365 198 15 10 344 16 338 3.08e-16 80.9
Msa1435110 AT4G33360.3 25.556 360 199 14 10 339 4 324 4.27e-16 80.1
Msa1435110 AT4G11220.1 28.947 190 108 5 362 542 80 251 3.52e-12 67.4
Msa1435110 AT1G53500.1 28.390 236 128 10 10 215 12 236 1.21e-11 67.8
Msa1435110 AT4G33360.2 25.231 325 175 13 5 299 11 297 1.37e-11 66.2
Msa1435110 AT3G61560.1 30.622 209 119 7 351 536 38 243 2.00e-11 65.1
Msa1435110 AT3G61560.2 30.622 209 119 7 351 536 38 243 2.00e-11 65.1
Msa1435110 AT3G14790.1 27.755 245 136 10 1 215 1 234 2.73e-11 66.6
Msa1435110 AT3G14790.2 27.755 245 136 10 1 215 4 237 2.74e-11 66.6

Find 174 sgRNAs with CRISPR-Local

Find 417 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCTTGCAGAAGGGAATAAT+TGG 0.171596 tig0027613:+55189 Msa1435110:CDS
CTTTGAAGTAACAAACTTCT+TGG 0.203034 tig0027613:-55599 None:intergenic
CGTCCTACCTTCTCTACTTT+CGG 0.230913 tig0027613:+50115 Msa1435110:intron
GGCATATTTCATTACGAATA+TGG 0.231821 tig0027613:+52233 Msa1435110:intron
TCTGCTCGTTCTTAGCTTCC+TGG 0.240047 tig0027613:+55337 Msa1435110:CDS
CACCAATCACATCCCATATA+AGG 0.242796 tig0027613:-55965 None:intergenic
ATGAACTCCCAAAACTTTAT+AGG 0.247483 tig0027613:-52258 None:intergenic
GGTTTGCCGATGCCCTTATA+TGG 0.252412 tig0027613:+55952 Msa1435110:three_prime_UTR
GGAGTTCATGTCTCTAATTT+TGG 0.253874 tig0027613:+52272 Msa1435110:CDS
TTCCAGACTGCATTTGATTA+TGG 0.254715 tig0027613:+50169 Msa1435110:exon
AACAAACCTCAACTCTTAAA+AGG 0.261492 tig0027613:+50401 Msa1435110:CDS
TATGACCCATGTCATGTTAC+AGG 0.265492 tig0027613:-56112 None:intergenic
GTCCTACCTTCTCTACTTTC+GGG 0.300281 tig0027613:+50116 Msa1435110:intron
ATATGGAACCTATAAAGTTT+TGG 0.301633 tig0027613:+52250 Msa1435110:CDS
CTTTCTCAGTTGCCTCATCT+TGG 0.333806 tig0027613:+55141 Msa1435110:CDS
CTGTGTCCGCATCGCCGATT+TGG 0.334227 tig0027613:+50283 Msa1435110:CDS
GGATTGGTTATTAAGGCTAA+TGG 0.351234 tig0027613:+51030 Msa1435110:CDS
GGGTGAGGGATTGGTTATTA+AGG 0.352725 tig0027613:+51023 Msa1435110:CDS
ATGTGATTGGTGATTATCTT+TGG 0.355141 tig0027613:+55976 Msa1435110:three_prime_UTR
CTTGAACCCTCTGAGCAATT+AGG 0.355569 tig0027613:+50320 Msa1435110:CDS
TAGTTGTTTAAAGAAGAATT+TGG 0.361224 tig0027613:-50536 None:intergenic
TTCTCTTACCAGTTCATTGT+TGG 0.367722 tig0027613:+51444 Msa1435110:intron
TATCATGCCAATTGCACATT+TGG 0.370214 tig0027613:+53357 Msa1435110:CDS
ACCTGGGAAGCTATTTAGAT+TGG 0.370608 tig0027613:+55892 Msa1435110:three_prime_UTR
CTTAAGAACTTGTATACTAT+AGG 0.373557 tig0027613:+55371 Msa1435110:CDS
ACTCCTATCGGGAATTTAAT+CGG 0.378975 tig0027613:+55931 Msa1435110:three_prime_UTR
TTAATCTCTGCAGCATTTGA+AGG 0.382000 tig0027613:+50485 Msa1435110:intron
TCGATCGGTTTATTCATTCA+TGG 0.385542 tig0027613:+54711 Msa1435110:CDS
GGAATTCATGGAATTCATAA+TGG 0.386447 tig0027613:+50747 Msa1435110:CDS
TTACTTCAAAGATTGATTGA+TGG 0.390041 tig0027613:+55611 Msa1435110:CDS
TGCTTCACCTTCAACATTGA+CGG 0.391665 tig0027613:-50573 None:intergenic
TATAGGCTGCTTGGCCCATA+TGG 0.393052 tig0027613:+53391 Msa1435110:CDS
TCCAAAGCTTCTGTATATCT+TGG 0.393295 tig0027613:+53971 Msa1435110:CDS
TTAAAATTTGTCACTCCTAT+CGG 0.395432 tig0027613:+55919 Msa1435110:three_prime_UTR
CAATAATTGTACAATGATAC+AGG 0.395876 tig0027613:-55714 None:intergenic
TCCAAGATATACAGAAGCTT+TGG 0.397177 tig0027613:-53972 None:intergenic
CACTCCACCAAATGTGCAAT+TGG 0.401026 tig0027613:-53364 None:intergenic
TGAGGCACCTTCATTCCATA+TGG 0.412154 tig0027613:-53406 None:intergenic
GATGTGAGTCTTATTCTTGA+AGG 0.416433 tig0027613:-53436 None:intergenic
CATCATTCCGTCAATGTTGA+AGG 0.420093 tig0027613:+50566 Msa1435110:CDS
CATGCCAATTGCACATTTGG+TGG 0.425591 tig0027613:+53360 Msa1435110:CDS
TGTGTCCGCATCGCCGATTT+GGG 0.426692 tig0027613:+50284 Msa1435110:CDS
TCTGAGCAATTAGGTCTTCT+CGG 0.432974 tig0027613:+50329 Msa1435110:CDS
ACCAATCACATCCCATATAA+GGG 0.435378 tig0027613:-55964 None:intergenic
GATTGGTTATTAAGGCTAAT+GGG 0.435448 tig0027613:+51031 Msa1435110:CDS
AAGAATTTGGAGCAGCCATA+TGG 0.438027 tig0027613:-50523 None:intergenic
CTCAGAGGGTTCAAGTTCAA+TGG 0.441397 tig0027613:-50312 None:intergenic
ATCGTTGCCTTATCCACCTT+CGG 0.448632 tig0027613:+50776 Msa1435110:CDS
ATTTGGTGGAGTGGATATAT+AGG 0.449440 tig0027613:+53374 Msa1435110:CDS
CAGAACCTGTAGAGGTATGA+TGG 0.450369 tig0027613:-53512 None:intergenic
TAAAATTTGTCACTCCTATC+GGG 0.453788 tig0027613:+55920 Msa1435110:three_prime_UTR
AGCAGCAAAGCCTCGTCCTC+CGG 0.454833 tig0027613:-50222 None:intergenic
GTTTGCCGATGCCCTTATAT+GGG 0.455839 tig0027613:+55953 Msa1435110:three_prime_UTR
CTGCTCGTTCTTAGCTTCCT+GGG 0.460258 tig0027613:+55338 Msa1435110:CDS
ATACAAGTTCTTAAGTGAAA+AGG 0.460456 tig0027613:-55363 None:intergenic
CCTGGGAAGCTATTTAGATT+GGG 0.461171 tig0027613:+55893 Msa1435110:three_prime_UTR
TACCAGTTCATTGTTGGTGA+TGG 0.464034 tig0027613:+51450 Msa1435110:intron
TTCAATGGTGGATCCCAAAT+CGG 0.464651 tig0027613:-50297 None:intergenic
AAAGAGAGCTTAAAATGTTG+TGG 0.465718 tig0027613:+55850 Msa1435110:three_prime_UTR
GCGGACAACACGAAAGAGTA+AGG 0.466651 tig0027613:-49974 None:intergenic
TAAAGCCGAGGGTGAGGGAT+TGG 0.474854 tig0027613:+51014 Msa1435110:CDS
TTTGATTATGGCGGCGGCGG+AGG 0.475500 tig0027613:+50181 Msa1435110:exon
GTAGGTACCGAAGGTGGATA+AGG 0.477922 tig0027613:-50783 None:intergenic
CCCAATCTAAATAGCTTCCC+AGG 0.481548 tig0027613:-55893 None:intergenic
GTATATCTTGGAAGTGGAAG+AGG 0.485555 tig0027613:+53983 Msa1435110:CDS
CAGTTGCTGACACGTTGCTT+TGG 0.485790 tig0027613:+54574 Msa1435110:intron
CGCCATAATCAAATGCAGTC+TGG 0.486266 tig0027613:-50171 None:intergenic
AGCAACTAAAGCCGAGGGTG+AGG 0.494138 tig0027613:+51008 Msa1435110:CDS
CGACGGTTCCATCACCATTA+CGG 0.495331 tig0027613:+49996 Msa1435110:five_prime_UTR
CTCTTTCGTGTTGTCCGCGA+CGG 0.495534 tig0027613:+49979 Msa1435110:five_prime_UTR
GGCTTGCAGTTGGTGAATCT+CGG 0.500925 tig0027613:-50076 None:intergenic
CTTAAAATGTTGTGGGTTGG+AGG 0.501325 tig0027613:+55858 Msa1435110:three_prime_UTR
AGGTTTGTTGCGAAGATCGA+CGG 0.502657 tig0027613:-50387 None:intergenic
TTATAAAATAAGAAATGTCA+TGG 0.504092 tig0027613:-56228 None:intergenic
TGCACCCATCATACCTCTAC+AGG 0.507092 tig0027613:+53507 Msa1435110:CDS
GCATTTGATTATGGCGGCGG+CGG 0.508585 tig0027613:+50178 Msa1435110:exon
GAAAGGTGGTGTGTGGTCAC+CGG 0.510184 tig0027613:+50203 Msa1435110:CDS
AAGATATACAGAAGCTTTGG+AGG 0.510237 tig0027613:-53969 None:intergenic
TCGAATCATATCCACATTTG+AGG 0.511233 tig0027613:+53912 Msa1435110:CDS
GAGCTTAAAATGTTGTGGGT+TGG 0.511327 tig0027613:+55855 Msa1435110:three_prime_UTR
TGCTGACACGTTGCTTTGGA+AGG 0.511938 tig0027613:+54578 Msa1435110:CDS
TGTGTGGTCACCGGAGGACG+AGG 0.512379 tig0027613:+50212 Msa1435110:CDS
GCGATATCTCTCCTCACAAA+AGG 0.515045 tig0027613:+50021 Msa1435110:five_prime_UTR
AAGAGAGCTTAAAATGTTGT+GGG 0.515659 tig0027613:+55851 Msa1435110:three_prime_UTR
ATGTGAGTCTTATTCTTGAA+GGG 0.515692 tig0027613:-53435 None:intergenic
GCTTCTGTATATCTTGGAAG+TGG 0.518379 tig0027613:+53977 Msa1435110:CDS
TTGAGAAAATGCCCACATCA+TGG 0.518767 tig0027613:+55084 Msa1435110:CDS
GCAACTAAAGCCGAGGGTGA+GGG 0.520116 tig0027613:+51009 Msa1435110:CDS
TGCAGCATTTGAAGGAGTTG+AGG 0.521031 tig0027613:+50493 Msa1435110:intron
CCAATTATTCCCTTCTGCAA+GGG 0.522767 tig0027613:-55189 None:intergenic
CCCAATTATTCCCTTCTGCA+AGG 0.526936 tig0027613:-55190 None:intergenic
ACTGCATTTGATTATGGCGG+CGG 0.527486 tig0027613:+50175 Msa1435110:exon
GAGCTCGATCAGCACATATG+TGG 0.527742 tig0027613:-51518 None:intergenic
TGGAGGTTGATTGATAAACC+TGG 0.528757 tig0027613:+55875 Msa1435110:three_prime_UTR
TGGAAGGTCTTGGATATCAA+AGG 0.529691 tig0027613:+52292 Msa1435110:CDS
GAGAGATATCGCAGCCGTAA+TGG 0.536624 tig0027613:-50010 None:intergenic
TATCGCAGCCGTAATGGTGA+TGG 0.538048 tig0027613:-50004 None:intergenic
CCTTGCAGAAGGGAATAATT+GGG 0.540074 tig0027613:+55190 Msa1435110:CDS
TTATGGCGGCGGCGGAGGAA+AGG 0.542684 tig0027613:+50186 Msa1435110:exon
TGGCGGCGGCGGAGGAAAGG+TGG 0.543511 tig0027613:+50189 Msa1435110:CDS
CGAATCATATCCACATTTGA+GGG 0.546936 tig0027613:+53913 Msa1435110:CDS
CTTCTATTATACTCATCGAT+CGG 0.547051 tig0027613:+54696 Msa1435110:CDS
CAGACTGCATTTGATTATGG+CGG 0.547350 tig0027613:+50172 Msa1435110:exon
TTGAGCAAACATGACTCAAA+GGG 0.547821 tig0027613:-56002 None:intergenic
CATCTTCATTTAATCCACGT+TGG 0.548065 tig0027613:+55686 Msa1435110:three_prime_UTR
TGATTGGTGATTATCTTTGG+CGG 0.548486 tig0027613:+55979 Msa1435110:three_prime_UTR
TAGGGCGTATGCAACATGTC+AGG 0.552269 tig0027613:-51065 None:intergenic
ATTGGCATGATAACAAAGAC+AGG 0.553368 tig0027613:-53346 None:intergenic
GTAGAAAGCTGTAAATGCTA+AGG 0.553726 tig0027613:-55494 None:intergenic
GAGTGGATATATAGGCTGCT+TGG 0.554338 tig0027613:+53382 Msa1435110:CDS
GGACACAGTAGGTGTTCAAT+CGG 0.555516 tig0027613:-50268 None:intergenic
AAGACAGGGATCTTTATGCT+TGG 0.556912 tig0027613:-53331 None:intergenic
GCAGTCTGGAAGGTTAGTTA+TGG 0.557136 tig0027613:-50157 None:intergenic
TGTAAACTTGCTCGGAGTAG+AGG 0.558240 tig0027613:+55783 Msa1435110:three_prime_UTR
CTTTGTAAGAGCAGTAATGA+AGG 0.563257 tig0027613:-54673 None:intergenic
CACATCCCATATAAGGGCAT+CGG 0.564155 tig0027613:-55958 None:intergenic
TCTTAAGTGAAAAGGCTCCC+AGG 0.566172 tig0027613:-55355 None:intergenic
CAACTTAAGTCTAAAAGAGA+AGG 0.566200 tig0027613:+53944 Msa1435110:CDS
GCATTAAAATCCCTTGCAGA+AGG 0.567802 tig0027613:+55179 Msa1435110:CDS
GCGCCGCTGAGGCTTGCAGT+TGG 0.573654 tig0027613:-50086 None:intergenic
GCTTGGCCCATATGGAATGA+AGG 0.577124 tig0027613:+53399 Msa1435110:CDS
TTTCACATATGTTGAAAATG+TGG 0.577379 tig0027613:+51488 Msa1435110:CDS
TCAAAACCTGTAACATGACA+TGG 0.578204 tig0027613:+56106 Msa1435110:three_prime_UTR
GAGGCACCTTCATTCCATAT+GGG 0.580167 tig0027613:-53405 None:intergenic
TTTGAGCAAACATGACTCAA+AGG 0.583039 tig0027613:-56003 None:intergenic
AGAAGACCTAATTGCTCAGA+GGG 0.584128 tig0027613:-50326 None:intergenic
GCCCTTATATGGGATGTGAT+TGG 0.584219 tig0027613:+55963 Msa1435110:three_prime_UTR
GGCGGAGGAAAGGTGGTGTG+TGG 0.587912 tig0027613:+50196 Msa1435110:CDS
CACAGCAAAATTCCAAGATG+AGG 0.589243 tig0027613:-55153 None:intergenic
TGATCGAGCTCTAGCTTCAG+AGG 0.590757 tig0027613:+51530 Msa1435110:CDS
TGTGAGTCTTATTCTTGAAG+GGG 0.592528 tig0027613:-53434 None:intergenic
CATTAAAATCCCTTGCAGAA+GGG 0.592814 tig0027613:+55180 Msa1435110:CDS
AGAACCTGTAGAGGTATGAT+GGG 0.594321 tig0027613:-53511 None:intergenic
AGCTCGATCAGCACATATGT+GGG 0.596317 tig0027613:-51517 None:intergenic
GGAGGTTGATTGATAAACCT+GGG 0.598447 tig0027613:+55876 Msa1435110:three_prime_UTR
GTATGATGGGTGCATAGTCA+AGG 0.599231 tig0027613:-53498 None:intergenic
CATTGACGGAATGATGAAGC+TGG 0.600987 tig0027613:-50559 None:intergenic
TCACCAACTGCAAGCCTCAG+CGG 0.601878 tig0027613:+50083 Msa1435110:five_prime_UTR
GGACGTGGATCGCGCCGCTG+AGG 0.602311 tig0027613:-50097 None:intergenic
GGAGACATATTGAGCACGAC+CGG 0.604728 tig0027613:-50366 None:intergenic
AATAACCAATCCCTCACCCT+CGG 0.605731 tig0027613:-51019 None:intergenic
TTACTCAGCAACTAAAGCCG+AGG 0.607635 tig0027613:+51002 Msa1435110:CDS
ATTCTTGAAGGGGTCAGCTG+AGG 0.610389 tig0027613:-53424 None:intergenic
ATAATCAAATGCAGTCTGGA+AGG 0.612641 tig0027613:-50167 None:intergenic
AGGTGGTGTGTGGTCACCGG+AGG 0.612663 tig0027613:+50206 Msa1435110:CDS
CTCGGTCAAGCTTTACACTC+CGG 0.614278 tig0027613:+50347 Msa1435110:CDS
ATTAAGGCTAATGGGACTAG+TGG 0.621571 tig0027613:+51039 Msa1435110:CDS
GAGAAGACCTAATTGCTCAG+AGG 0.625054 tig0027613:-50327 None:intergenic
TGGCAAAGGCTCCTTTGAGT+CGG 0.625999 tig0027613:+56078 Msa1435110:three_prime_UTR
CAATTGCACATTTGGTGGAG+TGG 0.628998 tig0027613:+53365 Msa1435110:CDS
AGAGGGTTCAAGTTCAATGG+TGG 0.630912 tig0027613:-50309 None:intergenic
AAACCGATTAAATTCCCGAT+AGG 0.632453 tig0027613:-55934 None:intergenic
CGGACACCCGAAAGTAGAGA+AGG 0.635370 tig0027613:-50122 None:intergenic
TACTCAGCAACTAAAGCCGA+GGG 0.636180 tig0027613:+51003 Msa1435110:CDS
GATCGAGCTCTAGCTTCAGA+GGG 0.640107 tig0027613:+51531 Msa1435110:CDS
GGTAAAGTAGGTACCGAAGG+TGG 0.641463 tig0027613:-50789 None:intergenic
AAAGGCGACTGTCGTCGCAA+CGG 0.646567 tig0027613:+50039 Msa1435110:five_prime_UTR
AAACGTCACAGAACCTGTAG+AGG 0.648903 tig0027613:-53520 None:intergenic
TGATAAGTGAAACCATGATG+TGG 0.662199 tig0027613:-55096 None:intergenic
AGATATACAGAAGCTTTGGA+GGG 0.663079 tig0027613:-53968 None:intergenic
AAGGCACCAACAGTTTCACC+AGG 0.665001 tig0027613:-51102 None:intergenic
ATCGGCGATGCGGACACAGT+AGG 0.665728 tig0027613:-50279 None:intergenic
CGGACAACACGAAAGAGTAA+GGG 0.667224 tig0027613:-49973 None:intergenic
AGTTATGGATCACAGAGTCA+CGG 0.675946 tig0027613:-50142 None:intergenic
TGGATCCCAAATCGGCGATG+CGG 0.678949 tig0027613:-50289 None:intergenic
GATAAGTGAAACCATGATGT+GGG 0.683459 tig0027613:-55095 None:intergenic
CAAAACCTGTAACATGACAT+GGG 0.684151 tig0027613:+56107 Msa1435110:three_prime_UTR
AATAATTGTACAATGATACA+GGG 0.693390 tig0027613:-55713 None:intergenic
TCTTGCAGGAGGGCATACGG+AGG 0.702619 tig0027613:+53885 Msa1435110:intron
TAATGGTGATGGAACCGTCG+CGG 0.717470 tig0027613:-49993 None:intergenic
GCAGTTGGTGAATCTCGGTG+CGG 0.718655 tig0027613:-50071 None:intergenic
TTGGCATGATAACAAAGACA+GGG 0.735805 tig0027613:-53345 None:intergenic
TGATGGGTGCATAGTCAAGG+CGG 0.737283 tig0027613:-53495 None:intergenic
TGATACAGGGAATTCCAACG+TGG 0.825223 tig0027613:-55700 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TCTATTTTTTTAATGAAATA+AGG + tig0027613:53210-53229 Msa1435110:intron 10.0%
!!! TATGTTTATATTAGTTTATT+TGG - tig0027613:53257-53276 None:intergenic 10.0%
!! AACTAATATAAACATAATTA+TGG + tig0027613:53261-53280 Msa1435110:intron 10.0%
!! ATATTAAAAAAAAAAAACGT+TGG + tig0027613:54178-54197 Msa1435110:intron 10.0%
!! TATGTATATTATCTTTAAAT+AGG - tig0027613:54896-54915 None:intergenic 10.0%
!! ATATAATTTAATCTAGCTAT+TGG + tig0027613:50910-50929 Msa1435110:intron 15.0%
!! TATAATTTAATCTAGCTATT+GGG + tig0027613:50911-50930 Msa1435110:intron 15.0%
!! ATAAATCATCAATTAAAGAA+AGG - tig0027613:51420-51439 None:intergenic 15.0%
!! AAACAATGTTAATATGTTAA+AGG + tig0027613:51757-51776 Msa1435110:intron 15.0%
!!! TTTAATTTCATTTTTTGCTT+AGG - tig0027613:52511-52530 None:intergenic 15.0%
!!! TTTTTAAAATCACATACTTT+TGG + tig0027613:55553-55572 Msa1435110:CDS 15.0%
!! TTATAAAATAAGAAATGTCA+TGG - tig0027613:56231-56250 None:intergenic 15.0%
!! TAGTTGTTTAAAGAAGAATT+TGG - tig0027613:50539-50558 None:intergenic 20.0%
!!! TAACTTTCATTTTTTTGACT+TGG + tig0027613:50824-50843 Msa1435110:intron 20.0%
!! TTGTTAAACTTAGTTAGATT+CGG + tig0027613:52098-52117 Msa1435110:intron 20.0%
!!! ATGATAAATACTTGTTTTGT+AGG + tig0027613:52212-52231 Msa1435110:intron 20.0%
!!! GTTTTATTCCATAATATTGA+AGG + tig0027613:52700-52719 Msa1435110:intron 20.0%
!! AAAGATAATAATTAATAGCC+AGG - tig0027613:52805-52824 None:intergenic 20.0%
!! AATCCAAATAAGCTATAAAT+AGG - tig0027613:52849-52868 None:intergenic 20.0%
!! TAATTAAGCATATATTGAGT+AGG - tig0027613:53040-53059 None:intergenic 20.0%
!!! AATTAAGTTGTTTATCCAAA+TGG + tig0027613:53055-53074 Msa1435110:intron 20.0%
!! CATAAAAAAAAAACCGTTAA+GGG - tig0027613:53127-53146 None:intergenic 20.0%
!! TGAAATAAGGAATACATTTA+CGG + tig0027613:53223-53242 Msa1435110:intron 20.0%
!! TGTTCTTCATGTTTAATTAA+GGG + tig0027613:53851-53870 Msa1435110:intron 20.0%
!!! TTTAGACTTAAGTTGATTTT+CGG - tig0027613:53939-53958 None:intergenic 20.0%
!! CCAAAACAAAAATAACAAAA+AGG - tig0027613:54063-54082 None:intergenic 20.0%
!!! CCTTTTTGTTATTTTTGTTT+TGG + tig0027613:54060-54079 Msa1435110:intron 20.0%
!! AACTCTTAAAGTTCAAATTT+CGG + tig0027613:54371-54390 Msa1435110:intron 20.0%
!! TTTCTACGTTTATGAAAAAA+AGG + tig0027613:55510-55529 Msa1435110:CDS 20.0%
!! AATAATTGTACAATGATACA+GGG - tig0027613:55716-55735 None:intergenic 20.0%
!! TTTCTACCAAAAAATTGATA+TGG + tig0027613:56058-56077 Msa1435110:three_prime_UTR 20.0%
!!! GTTGTTTTGTTTTGGTATTA+AGG - tig0027613:50431-50450 None:intergenic 25.0%
!!! TGTAGAATGTTGTTTTGTTT+TGG - tig0027613:50439-50458 None:intergenic 25.0%
!!! AGTTAGGTGTTTATTTTTGA+AGG + tig0027613:50642-50661 Msa1435110:intron 25.0%
!! TAGGTTCAAAATGTTTGTTA+TGG + tig0027613:50941-50960 Msa1435110:intron 25.0%
! AATAAGTAATCCAATACTCA+CGG + tig0027613:51214-51233 Msa1435110:intron 25.0%
! TTTCACATATGTTGAAAATG+TGG + tig0027613:51488-51507 Msa1435110:CDS 25.0%
! GCATGACTAAAAAAGTTATA+TGG - tig0027613:51588-51607 None:intergenic 25.0%
! TTGTAAATGAAAGATAAGAG+AGG + tig0027613:51619-51638 Msa1435110:intron 25.0%
!!! TGATGGTGTATTTTAAGATT+TGG + tig0027613:51656-51675 Msa1435110:intron 25.0%
! TAAAGGTAGAAACATTTATC+TGG + tig0027613:51774-51793 Msa1435110:intron 25.0%
! AAAGGTAGAAACATTTATCT+GGG + tig0027613:51775-51794 Msa1435110:intron 25.0%
!!! ATTGAGTATTGCATTTTTTG+TGG + tig0027613:52122-52141 Msa1435110:intron 25.0%
!! ATATGGAACCTATAAAGTTT+TGG + tig0027613:52250-52269 Msa1435110:CDS 25.0%
!! TATGGAACCTATAAAGTTTT+GGG + tig0027613:52251-52270 Msa1435110:CDS 25.0%
!!! GTCTCTTTTGACTATAAATA+GGG - tig0027613:52629-52648 None:intergenic 25.0%
!!! TGTCTCTTTTGACTATAAAT+AGG - tig0027613:52630-52649 None:intergenic 25.0%
!!! TATCTTTTTTTTTGTGCGTT+TGG + tig0027613:52818-52837 Msa1435110:intron 25.0%
! GCTTATTTGGATTTATCTTA+TGG + tig0027613:52856-52875 Msa1435110:intron 25.0%
!! TAGCTTATGATATCTTTTAG+CGG + tig0027613:52915-52934 Msa1435110:intron 25.0%
! CTTATTTCAATAAGCTCTAT+AGG + tig0027613:52945-52964 Msa1435110:intron 25.0%
!! TACTTTTCATATAAGCACTT+AGG - tig0027613:53017-53036 None:intergenic 25.0%
! TATTAAATAAGGATGCCATT+TGG - tig0027613:53073-53092 None:intergenic 25.0%
! GATCAGGTGTTTATTAAATA+AGG - tig0027613:53084-53103 None:intergenic 25.0%
! GCATAAAAAAAAAACCGTTA+AGG - tig0027613:53128-53147 None:intergenic 25.0%
!! TATGAGATGTGATTCTAAAA+TGG + tig0027613:53756-53775 Msa1435110:intron 25.0%
! GTGTTCTTCATGTTTAATTA+AGG + tig0027613:53850-53869 Msa1435110:intron 25.0%
! AAAAATTGCAAAGATAATGC+AGG + tig0027613:54202-54221 Msa1435110:intron 25.0%
! TAGTAAAAAATTAGGAATGG+TGG - tig0027613:54421-54440 None:intergenic 25.0%
! CACTAGTAAAAAATTAGGAA+TGG - tig0027613:54424-54443 None:intergenic 25.0%
! GTGATCACTAGTAAAAAATT+AGG - tig0027613:54429-54448 None:intergenic 25.0%
! GAGAAATTATTTCCTGAATA+AGG - tig0027613:54952-54971 None:intergenic 25.0%
!! AGTCAATTTTATATATCCTG+AGG + tig0027613:55257-55276 Msa1435110:intron 25.0%
! ATACAAGTTCTTAAGTGAAA+AGG - tig0027613:55366-55385 None:intergenic 25.0%
! CTTAAGAACTTGTATACTAT+AGG + tig0027613:55371-55390 Msa1435110:CDS 25.0%
!!! TTTGTTATTGTCTTTGTTAC+AGG + tig0027613:55466-55485 Msa1435110:intron 25.0%
! TTACTTCAAAGATTGATTGA+TGG + tig0027613:55611-55630 Msa1435110:CDS 25.0%
! CAATAATTGTACAATGATAC+AGG - tig0027613:55717-55736 None:intergenic 25.0%
! AACTCAAAAAAAACATCTAC+TGG - tig0027613:55756-55775 None:intergenic 25.0%
!!! TTTTGTAATGTAAACTTGCT+CGG + tig0027613:55775-55794 Msa1435110:three_prime_UTR 25.0%
! TTAAAATTTGTCACTCCTAT+CGG + tig0027613:55919-55938 Msa1435110:three_prime_UTR 25.0%
! AGATACATCAGAAAAAACAA+TGG - tig0027613:56034-56053 None:intergenic 25.0%
AACAAACCTCAACTCTTAAA+AGG + tig0027613:50401-50420 Msa1435110:CDS 30.0%
TGTTTCTTTCGATCTAAGTT+AGG + tig0027613:50626-50645 Msa1435110:intron 30.0%
ATTCCATCAAAAACAACACT+GGG - tig0027613:50732-50751 None:intergenic 30.0%
AATTCCATCAAAAACAACAC+TGG - tig0027613:50733-50752 None:intergenic 30.0%
!!! GTTGTTTTTGATGGAATTCA+TGG + tig0027613:50735-50754 Msa1435110:CDS 30.0%
GGAATTCATGGAATTCATAA+TGG + tig0027613:50747-50766 Msa1435110:CDS 30.0%
TGAAAGTTAAAACGAAGTGT+TGG - tig0027613:50813-50832 None:intergenic 30.0%
!! TTGACTTGGATTGAAACTTT+AGG + tig0027613:50838-50857 Msa1435110:intron 30.0%
TATACATGATATGCATGGAT+AGG + tig0027613:50873-50892 Msa1435110:intron 30.0%
ATACATGATATGCATGGATA+GGG + tig0027613:50874-50893 Msa1435110:intron 30.0%
ATTTAATCTAGCTATTGGGA+TGG + tig0027613:50915-50934 Msa1435110:intron 30.0%
! GATTGGTTATTAAGGCTAAT+GGG + tig0027613:51031-51050 Msa1435110:CDS 30.0%
ATCAAACATTTACCAAAAGC+AGG - tig0027613:51179-51198 None:intergenic 30.0%
! TAAATCCAATTTTGTTCCTG+TGG - tig0027613:51281-51300 None:intergenic 30.0%
! TAAAATTAAGTGCCGTGATA+TGG + tig0027613:51332-51351 Msa1435110:intron 30.0%
AACATTTATCTGGGTAAATG+AGG + tig0027613:51784-51803 Msa1435110:intron 30.0%
AAGACATACTTGTGGATATT+AGG + tig0027613:51815-51834 Msa1435110:intron 30.0%
!!! TTGTAGACAAAGGTTTTGTT+AGG - tig0027613:51867-51886 None:intergenic 30.0%
! ATAAACCTTGTTGTAGACAA+AGG - tig0027613:51877-51896 None:intergenic 30.0%
AACAAGGTTTATCTATCTCA+GGG + tig0027613:51885-51904 Msa1435110:intron 30.0%
AAGTTCAGAAAAATTGAGAG+AGG - tig0027613:52021-52040 None:intergenic 30.0%
! ATTTTTCTGAACTTTCTCTC+TGG + tig0027613:52027-52046 Msa1435110:intron 30.0%
AACATCAGTTTCTAACAGTA+GGG + tig0027613:52065-52084 Msa1435110:intron 30.0%
ATGGATCTGTATATTAAGCT+TGG + tig0027613:52158-52177 Msa1435110:intron 30.0%
TGGATCTGTATATTAAGCTT+GGG + tig0027613:52159-52178 Msa1435110:intron 30.0%
GGCATATTTCATTACGAATA+TGG + tig0027613:52233-52252 Msa1435110:intron 30.0%
ATGAACTCCCAAAACTTTAT+AGG - tig0027613:52261-52280 None:intergenic 30.0%
! TTCATGTCTCTAATTTTGGA+AGG + tig0027613:52276-52295 Msa1435110:CDS 30.0%
! CTTTTGTACTGTTAACCATT+AGG + tig0027613:52321-52340 Msa1435110:intron 30.0%
ACTTTAATTCACGAGAGATT+TGG - tig0027613:52414-52433 None:intergenic 30.0%
!!! ATTTTGACTTGAAACACTTC+AGG + tig0027613:52442-52461 Msa1435110:intron 30.0%
!! TTTTGACTATAAATAGGGCA+GGG - tig0027613:52624-52643 None:intergenic 30.0%
TATTTGCGCCTTCAATATTA+TGG - tig0027613:52711-52730 None:intergenic 30.0%
!! CGCAAATATAAGTTGGATTT+TGG + tig0027613:52723-52742 Msa1435110:intron 30.0%
!! ATAAGTTGGATTTTGGCATT+AGG + tig0027613:52730-52749 Msa1435110:intron 30.0%
GAGCCTATTTATAGCTTATT+TGG + tig0027613:52843-52862 Msa1435110:intron 30.0%
ATGTAATCAAAGAGTGAATG+TGG - tig0027613:52983-53002 None:intergenic 30.0%
GTACATAACTCAGATAACAA+AGG - tig0027613:53303-53322 None:intergenic 30.0%
!! ATGTGAGTCTTATTCTTGAA+GGG - tig0027613:53438-53457 None:intergenic 30.0%
! TTTTGAGCAATCAAAAGATC+TGG - tig0027613:53467-53486 None:intergenic 30.0%
!! TTTTGATTGCTCAAAAGCAA+AGG + tig0027613:53471-53490 Msa1435110:CDS 30.0%
TGTCTTAACTCCAATATTCA+TGG + tig0027613:53562-53581 Msa1435110:intron 30.0%
!!! AGGATTTTTTTCAAAGCACA+TGG - tig0027613:53655-53674 None:intergenic 30.0%
TGAAAAAAATCCTGAGAAGT+TGG + tig0027613:53662-53681 Msa1435110:intron 30.0%
! CACAGTATCAGTAATTTTGT+AGG - tig0027613:53700-53719 None:intergenic 30.0%
CTACAAAATTACTGATACTG+TGG + tig0027613:53698-53717 Msa1435110:intron 30.0%
TGTTAATCCTACTTCTTGTA+CGG + tig0027613:53826-53845 Msa1435110:intron 30.0%
CAACTTAAGTCTAAAAGAGA+AGG + tig0027613:53944-53963 Msa1435110:CDS 30.0%
CACAAACAAAGAAGTTAGAT+GGG - tig0027613:54027-54046 None:intergenic 30.0%
TCACAAACAAAGAAGTTAGA+TGG - tig0027613:54028-54047 None:intergenic 30.0%
! ACTTCTTTGTTTGTGATATC+TGG + tig0027613:54032-54051 Msa1435110:intron 30.0%
TCTAAACGCCATTTAAAAGT+AGG + tig0027613:54111-54130 Msa1435110:intron 30.0%
!! TGAATGTGCCTACTTTTAAA+TGG - tig0027613:54122-54141 None:intergenic 30.0%
GGATATGACATGAACAAATT+GGG - tig0027613:54248-54267 None:intergenic 30.0%
AGGATATGACATGAACAAAT+TGG - tig0027613:54249-54268 None:intergenic 30.0%
TAAAAAATTAGGAATGGTGG+TGG - tig0027613:54418-54437 None:intergenic 30.0%
CTTCTATTATACTCATCGAT+CGG + tig0027613:54696-54715 Msa1435110:CDS 30.0%
TACAGTGTTAATTGACAATC+TGG - tig0027613:54811-54830 None:intergenic 30.0%
ATTGTATGCTTGTTCAGATT+GGG + tig0027613:55053-55072 Msa1435110:intron 30.0%
! TAATTGGGTGATGTTTTTCA+AGG + tig0027613:55205-55224 Msa1435110:CDS 30.0%
AAACAACCTATTGATCACAA+AGG - tig0027613:55313-55332 None:intergenic 30.0%
CTACGTTTATGAAAAAAAGG+AGG + tig0027613:55513-55532 Msa1435110:CDS 30.0%
!! CTTTGAAGTAACAAACTTCT+TGG - tig0027613:55602-55621 None:intergenic 30.0%
!!! TTGATGGTTTTTTCTTCTTC+TGG + tig0027613:55627-55646 Msa1435110:exon 30.0%
! CTAGATTTTTCTTAGATGAG+CGG + tig0027613:55656-55675 Msa1435110:three_prime_UTR 30.0%
! TAGATTTTTCTTAGATGAGC+GGG + tig0027613:55657-55676 Msa1435110:three_prime_UTR 30.0%
AAAGAGAGCTTAAAATGTTG+TGG + tig0027613:55850-55869 Msa1435110:three_prime_UTR 30.0%
AAGAGAGCTTAAAATGTTGT+GGG + tig0027613:55851-55870 Msa1435110:three_prime_UTR 30.0%
TAAAATTTGTCACTCCTATC+GGG + tig0027613:55920-55939 Msa1435110:three_prime_UTR 30.0%
! ATGTGATTGGTGATTATCTT+TGG + tig0027613:55976-55995 Msa1435110:three_prime_UTR 30.0%
!!! CCTTTGCCATATCAATTTTT+TGG - tig0027613:56067-56086 None:intergenic 30.0%
CCAAAAAATTGATATGGCAA+AGG + tig0027613:56064-56083 Msa1435110:three_prime_UTR 30.0%
ATAATCAAATGCAGTCTGGA+AGG - tig0027613:50170-50189 None:intergenic 35.0%
TTCCAGACTGCATTTGATTA+TGG + tig0027613:50169-50188 Msa1435110:exon 35.0%
!! GGTTAACCTTTTAAGAGTTG+AGG - tig0027613:50410-50429 None:intergenic 35.0%
TTAATCTCTGCAGCATTTGA+AGG + tig0027613:50485-50504 Msa1435110:intron 35.0%
!! AGTTGAGGTTGTTTTCCATA+TGG + tig0027613:50508-50527 Msa1435110:CDS 35.0%
!! AAACGAAGTGTTGGTAAAGT+AGG - tig0027613:50804-50823 None:intergenic 35.0%
CTGCATATACATGATATGCA+TGG + tig0027613:50868-50887 Msa1435110:intron 35.0%
TACATGATATGCATGGATAG+GGG + tig0027613:50875-50894 Msa1435110:intron 35.0%
ATCATTATGCTGGAAACAGT+AGG - tig0027613:50980-50999 None:intergenic 35.0%
CTGAGTAATGATCATTATGC+TGG - tig0027613:50990-51009 None:intergenic 35.0%
!! GGATTGGTTATTAAGGCTAA+TGG + tig0027613:51030-51049 Msa1435110:CDS 35.0%
! ATGTTGTTCTTACCTGCTTT+TGG + tig0027613:51164-51183 Msa1435110:intron 35.0%
! TTGAATCTGAAGTTTACCAC+AGG + tig0027613:51262-51281 Msa1435110:intron 35.0%
GTTTACCACAGGAACAAAAT+TGG + tig0027613:51273-51292 Msa1435110:intron 35.0%
! CAACCAGTTTTTCCATATCA+CGG - tig0027613:51347-51366 None:intergenic 35.0%
GTGATATGGAAAAACTGGTT+GGG + tig0027613:51346-51365 Msa1435110:intron 35.0%
TGATATGGAAAAACTGGTTG+GGG + tig0027613:51347-51366 Msa1435110:intron 35.0%
AAGTAGTCACACATGCATAT+TGG - tig0027613:51374-51393 None:intergenic 35.0%
TTCTCTTACCAGTTCATTGT+TGG + tig0027613:51444-51463 Msa1435110:intron 35.0%
!! AGGCATAAGAGAAGTTTTGA+TGG + tig0027613:51639-51658 Msa1435110:intron 35.0%
AAGTCTGAAAGACATACTTG+TGG + tig0027613:51807-51826 Msa1435110:intron 35.0%
TTAGGAATAGAAAAGTCCAG+TGG + tig0027613:51833-51852 Msa1435110:intron 35.0%
TAGGAATAGAAAAGTCCAGT+GGG + tig0027613:51834-51853 Msa1435110:intron 35.0%
CAAAACCTTTGTCTACAACA+AGG + tig0027613:51869-51888 Msa1435110:intron 35.0%
CAACAAGGTTTATCTATCTC+AGG + tig0027613:51884-51903 Msa1435110:intron 35.0%
GAACATCAGTTTCTAACAGT+AGG + tig0027613:52064-52083 Msa1435110:intron 35.0%
TTGTGGAGAAAAACGAAAGA+TGG + tig0027613:52139-52158 Msa1435110:intron 35.0%
! GGAGTTCATGTCTCTAATTT+TGG + tig0027613:52272-52291 Msa1435110:CDS 35.0%
!! TCTCTAATTTTGGAAGGTCT+TGG + tig0027613:52282-52301 Msa1435110:CDS 35.0%
TAAGAGCAAGAAAGACCTAA+TGG - tig0027613:52339-52358 None:intergenic 35.0%
TTCACTCTTGATGCAAAACA+AGG + tig0027613:52386-52405 Msa1435110:intron 35.0%
TTTGACTATAAATAGGGCAG+GGG - tig0027613:52623-52642 None:intergenic 35.0%
!! CTTTTGACTATAAATAGGGC+AGG - tig0027613:52625-52644 None:intergenic 35.0%
TATAGTCAAAAGAGACATGC+TGG + tig0027613:52633-52652 Msa1435110:intron 35.0%
! TTGAAGGCGCAAATATAAGT+TGG + tig0027613:52716-52735 Msa1435110:intron 35.0%
!! TGGATTTTGGCATTAGGATT+AGG + tig0027613:52736-52755 Msa1435110:intron 35.0%
AGTTTCTGTCAAATCATCTC+TGG + tig0027613:52763-52782 Msa1435110:intron 35.0%
GTTTCTGTCAAATCATCTCT+GGG + tig0027613:52764-52783 Msa1435110:intron 35.0%
!!! GGGTTAAGAATTTTTTGTCC+TGG + tig0027613:52784-52803 Msa1435110:intron 35.0%
TTAGGTTACGAAACTTGATC+AGG - tig0027613:53100-53119 None:intergenic 35.0%
TTGGCATGATAACAAAGACA+GGG - tig0027613:53348-53367 None:intergenic 35.0%
ATTGGCATGATAACAAAGAC+AGG - tig0027613:53349-53368 None:intergenic 35.0%
TATCATGCCAATTGCACATT+TGG + tig0027613:53357-53376 Msa1435110:CDS 35.0%
! ATTTGGTGGAGTGGATATAT+AGG + tig0027613:53374-53393 Msa1435110:CDS 35.0%
!! TGTGAGTCTTATTCTTGAAG+GGG - tig0027613:53437-53456 None:intergenic 35.0%
!! GATGTGAGTCTTATTCTTGA+AGG - tig0027613:53439-53458 None:intergenic 35.0%
!! TTTTTCAAAGCACATGGTTC+AGG - tig0027613:53649-53668 None:intergenic 35.0%
TTAGAATTAGCCAACTTCTC+AGG - tig0027613:53675-53694 None:intergenic 35.0%
GTTAATCCTACTTCTTGTAC+GGG + tig0027613:53827-53846 Msa1435110:intron 35.0%
TTAATCCTACTTCTTGTACG+GGG + tig0027613:53828-53847 Msa1435110:intron 35.0%
! ACTGTAATTTTTCTTGCAGG+AGG + tig0027613:53874-53893 Msa1435110:intron 35.0%
! CTGTAATTTTTCTTGCAGGA+GGG + tig0027613:53875-53894 Msa1435110:intron 35.0%
!! AGATATACAGAAGCTTTGGA+GGG - tig0027613:53971-53990 None:intergenic 35.0%
! AAGATATACAGAAGCTTTGG+AGG - tig0027613:53972-53991 None:intergenic 35.0%
TCCAAAGCTTCTGTATATCT+TGG + tig0027613:53971-53990 Msa1435110:CDS 35.0%
TCCAAGATATACAGAAGCTT+TGG - tig0027613:53975-53994 None:intergenic 35.0%
CACATTCACATAATTGTAGC+AGG + tig0027613:54134-54153 Msa1435110:intron 35.0%
ATGAGATATGTGGAGTAGAA+AGG - tig0027613:54269-54288 None:intergenic 35.0%
TCGTATCAAGATGAGATATG+TGG - tig0027613:54279-54298 None:intergenic 35.0%
TAAAGTTCAAATTTCGGAGC+TGG + tig0027613:54377-54396 Msa1435110:intron 35.0%
CTTTGTAAGAGCAGTAATGA+AGG - tig0027613:54676-54695 None:intergenic 35.0%
! TCGATCGGTTTATTCATTCA+TGG + tig0027613:54711-54730 Msa1435110:CDS 35.0%
ACCAGATTGTCAATTAACAC+TGG + tig0027613:54779-54798 Msa1435110:intron 35.0%
TCCAGTGTTAATTGACAATC+TGG - tig0027613:54783-54802 None:intergenic 35.0%
!! GTCGTTAACTTGTCTAATGA+TGG + tig0027613:54835-54854 Msa1435110:intron 35.0%
TGTTGTGTAGTTCCTTATTC+AGG + tig0027613:54937-54956 Msa1435110:intron 35.0%
CATCATTGTAGTTCTTGAGA+TGG - tig0027613:54974-54993 None:intergenic 35.0%
TACAATGATGATCCAGCTAT+TGG + tig0027613:54984-55003 Msa1435110:intron 35.0%
CATTGCACTTTCTAATGTGA+AGG + tig0027613:55010-55029 Msa1435110:intron 35.0%
CATTGTATGCTTGTTCAGAT+TGG + tig0027613:55052-55071 Msa1435110:intron 35.0%
TTGTATGCTTGTTCAGATTG+GGG + tig0027613:55054-55073 Msa1435110:intron 35.0%
GATAAGTGAAACCATGATGT+GGG - tig0027613:55098-55117 None:intergenic 35.0%
TGATAAGTGAAACCATGATG+TGG - tig0027613:55099-55118 None:intergenic 35.0%
CATTAAAATCCCTTGCAGAA+GGG + tig0027613:55180-55199 Msa1435110:CDS 35.0%
! TTTTATATATCCTGAGGTCG+TGG + tig0027613:55263-55282 Msa1435110:intron 35.0%
!! TTGAATCCATTGATAGTGCT+TGG + tig0027613:55427-55446 Msa1435110:intron 35.0%
GTAGAAAGCTGTAAATGCTA+AGG - tig0027613:55497-55516 None:intergenic 35.0%
AAAAAGGAGGAAGACATTGA+CGG + tig0027613:55526-55545 Msa1435110:CDS 35.0%
!!! TGGTTTTTTCTTCTTCTGGT+TGG + tig0027613:55631-55650 Msa1435110:three_prime_UTR 35.0%
CATCTTCATTTAATCCACGT+TGG + tig0027613:55686-55705 Msa1435110:three_prime_UTR 35.0%
!!! GTAGAGGTATTTTTTTGCAG+TGG + tig0027613:55799-55818 Msa1435110:three_prime_UTR 35.0%
ACTCCTATCGGGAATTTAAT+CGG + tig0027613:55931-55950 Msa1435110:three_prime_UTR 35.0%
AAACCGATTAAATTCCCGAT+AGG - tig0027613:55937-55956 None:intergenic 35.0%
ACCAATCACATCCCATATAA+GGG - tig0027613:55967-55986 None:intergenic 35.0%
! TGATTGGTGATTATCTTTGG+CGG + tig0027613:55979-55998 Msa1435110:three_prime_UTR 35.0%
TTGAGCAAACATGACTCAAA+GGG - tig0027613:56005-56024 None:intergenic 35.0%
TTTGAGCAAACATGACTCAA+AGG - tig0027613:56006-56025 None:intergenic 35.0%
TCAAAACCTGTAACATGACA+TGG + tig0027613:56106-56125 Msa1435110:three_prime_UTR 35.0%
CAAAACCTGTAACATGACAT+GGG + tig0027613:56107-56126 Msa1435110:three_prime_UTR 35.0%
AGTTATGGATCACAGAGTCA+CGG - tig0027613:50145-50164 None:intergenic 40.0%
CAGACTGCATTTGATTATGG+CGG + tig0027613:50172-50191 Msa1435110:exon 40.0%
!! TTCAATGGTGGATCCCAAAT+CGG - tig0027613:50300-50319 None:intergenic 40.0%
AGAAGACCTAATTGCTCAGA+GGG - tig0027613:50329-50348 None:intergenic 40.0%
TCTGAGCAATTAGGTCTTCT+CGG + tig0027613:50329-50348 Msa1435110:CDS 40.0%
! AAGAATTTGGAGCAGCCATA+TGG - tig0027613:50526-50545 None:intergenic 40.0%
CATCATTCCGTCAATGTTGA+AGG + tig0027613:50566-50585 Msa1435110:CDS 40.0%
TGCTTCACCTTCAACATTGA+CGG - tig0027613:50576-50595 None:intergenic 40.0%
!!! TCTCCCAGTGTTGTTTTTGA+TGG + tig0027613:50726-50745 Msa1435110:CDS 40.0%
CTAGCTATTGGGATGGAAAT+AGG + tig0027613:50922-50941 Msa1435110:intron 40.0%
ATTAAGGCTAATGGGACTAG+TGG + tig0027613:51039-51058 Msa1435110:CDS 40.0%
TTTGCAGCATCAACCAATGA+AGG - tig0027613:51124-51143 None:intergenic 40.0%
! TTCATTGGTTGATGCTGCAA+AGG + tig0027613:51123-51142 Msa1435110:intron 40.0%
GGTAAGAACAACATCTACCT+TGG - tig0027613:51158-51177 None:intergenic 40.0%
GATGAAATTGCCGTGAGTAT+TGG - tig0027613:51227-51246 None:intergenic 40.0%
CGTGATATGGAAAAACTGGT+TGG + tig0027613:51345-51364 Msa1435110:intron 40.0%
! TACCAGTTCATTGTTGGTGA+TGG + tig0027613:51450-51469 Msa1435110:intron 40.0%
!! TCCTGCAGCTTTTTCTGAAA+CGG - tig0027613:51559-51578 None:intergenic 40.0%
ATTGTCTGTTCTTTCTTCCC+TGG + tig0027613:51702-51721 Msa1435110:intron 40.0%
! TGTTAAAAGTGTGCACACCA+GGG - tig0027613:51722-51741 None:intergenic 40.0%
! TTGTTAAAAGTGTGCACACC+AGG - tig0027613:51723-51742 None:intergenic 40.0%
! TGGTGTGCACACTTTTAACA+AGG + tig0027613:51722-51741 Msa1435110:intron 40.0%
TCAATCACCCTCAGTTTGAA+CGG + tig0027613:51942-51961 Msa1435110:intron 40.0%
TGGAAGGTCTTGGATATCAA+AGG + tig0027613:52292-52311 Msa1435110:CDS 40.0%
GTAACCTAATGCACCCTTAA+CGG + tig0027613:53111-53130 Msa1435110:intron 40.0%
! AAAACCGTTAAGGGTGCATT+AGG - tig0027613:53118-53137 None:intergenic 40.0%
! TTTTATGCCCACGAGAATAC+TGG + tig0027613:53140-53159 Msa1435110:intron 40.0%
AGACAAACCAGTATTCTCGT+GGG - tig0027613:53150-53169 None:intergenic 40.0%
TAGACAAACCAGTATTCTCG+TGG - tig0027613:53151-53170 None:intergenic 40.0%
ATCTGAGTTATGTACCTTGC+AGG + tig0027613:53308-53327 Msa1435110:intron 40.0%
AAGACAGGGATCTTTATGCT+TGG - tig0027613:53334-53353 None:intergenic 40.0%
! AGAACCTGTAGAGGTATGAT+GGG - tig0027613:53514-53533 None:intergenic 40.0%
CAGTTCAGAGCCATGAATAT+TGG - tig0027613:53575-53594 None:intergenic 40.0%
GGATGATGTTTCTTGCTCAA+AGG + tig0027613:53777-53796 Msa1435110:intron 40.0%
! GGGACTGTAATTTTTCTTGC+AGG + tig0027613:53871-53890 Msa1435110:intron 40.0%
GCTTCTGTATATCTTGGAAG+TGG + tig0027613:53977-53996 Msa1435110:CDS 40.0%
GTATATCTTGGAAGTGGAAG+AGG + tig0027613:53983-54002 Msa1435110:CDS 40.0%
! CAGTGTGCTTACATTTTTGC+AGG - tig0027613:54744-54763 None:intergenic 40.0%
TTGAGAAAATGCCCACATCA+TGG + tig0027613:55084-55103 Msa1435110:CDS 40.0%
CACAGCAAAATTCCAAGATG+AGG - tig0027613:55156-55175 None:intergenic 40.0%
GCATTAAAATCCCTTGCAGA+AGG + tig0027613:55179-55198 Msa1435110:CDS 40.0%
CCAATTATTCCCTTCTGCAA+GGG - tig0027613:55192-55211 None:intergenic 40.0%
CCTTGCAGAAGGGAATAATT+GGG + tig0027613:55190-55209 Msa1435110:CDS 40.0%
CTATTGATCACAAAGGAGAG+AGG - tig0027613:55306-55325 None:intergenic 40.0%
CTCTCTCCTTTGTGATCAAT+AGG + tig0027613:55304-55323 Msa1435110:intron 40.0%
TCTCATCCAAGCACTATCAA+TGG - tig0027613:55436-55455 None:intergenic 40.0%
!!! TTTTGTTGACTCTGAAGCAG+TGG + tig0027613:55826-55845 Msa1435110:three_prime_UTR 40.0%
GAGCTTAAAATGTTGTGGGT+TGG + tig0027613:55855-55874 Msa1435110:three_prime_UTR 40.0%
!! CTTAAAATGTTGTGGGTTGG+AGG + tig0027613:55858-55877 Msa1435110:three_prime_UTR 40.0%
! TGGAGGTTGATTGATAAACC+TGG + tig0027613:55875-55894 Msa1435110:three_prime_UTR 40.0%
! GGAGGTTGATTGATAAACCT+GGG + tig0027613:55876-55895 Msa1435110:three_prime_UTR 40.0%
ACCTGGGAAGCTATTTAGAT+TGG + tig0027613:55892-55911 Msa1435110:three_prime_UTR 40.0%
CCTGGGAAGCTATTTAGATT+GGG + tig0027613:55893-55912 Msa1435110:three_prime_UTR 40.0%
CACCAATCACATCCCATATA+AGG - tig0027613:55968-55987 None:intergenic 40.0%
! TTTTGATGCATCCGACTCAA+AGG - tig0027613:56092-56111 None:intergenic 40.0%
TATGACCCATGTCATGTTAC+AGG - tig0027613:56115-56134 None:intergenic 40.0%
CGGACAACACGAAAGAGTAA+GGG - tig0027613:49976-49995 None:intergenic 45.0%
GCGATATCTCTCCTCACAAA+AGG + tig0027613:50021-50040 Msa1435110:five_prime_UTR 45.0%
AAAGTAGAGAAGGTAGGACG+TGG - tig0027613:50115-50134 None:intergenic 45.0%
CGTCCTACCTTCTCTACTTT+CGG + tig0027613:50115-50134 Msa1435110:intron 45.0%
GTCCTACCTTCTCTACTTTC+GGG + tig0027613:50116-50135 Msa1435110:intron 45.0%
! GCAGTCTGGAAGGTTAGTTA+TGG - tig0027613:50160-50179 None:intergenic 45.0%
CGCCATAATCAAATGCAGTC+TGG - tig0027613:50174-50193 None:intergenic 45.0%
ACTGCATTTGATTATGGCGG+CGG + tig0027613:50175-50194 Msa1435110:exon 45.0%
GGACACAGTAGGTGTTCAAT+CGG - tig0027613:50271-50290 None:intergenic 45.0%
! AGAGGGTTCAAGTTCAATGG+TGG - tig0027613:50312-50331 None:intergenic 45.0%
! CTCAGAGGGTTCAAGTTCAA+TGG - tig0027613:50315-50334 None:intergenic 45.0%
CTTGAACCCTCTGAGCAATT+AGG + tig0027613:50320-50339 Msa1435110:CDS 45.0%
GAGAAGACCTAATTGCTCAG+AGG - tig0027613:50330-50349 None:intergenic 45.0%
!! AGGTTTGTTGCGAAGATCGA+CGG - tig0027613:50390-50409 None:intergenic 45.0%
TGCAGCATTTGAAGGAGTTG+AGG + tig0027613:50493-50512 Msa1435110:intron 45.0%
CATTGACGGAATGATGAAGC+TGG - tig0027613:50562-50581 None:intergenic 45.0%
ATCGTTGCCTTATCCACCTT+CGG + tig0027613:50776-50795 Msa1435110:CDS 45.0%
!! GTTGGTAAAGTAGGTACCGA+AGG - tig0027613:50795-50814 None:intergenic 45.0%
TTACTCAGCAACTAAAGCCG+AGG + tig0027613:51002-51021 Msa1435110:CDS 45.0%
TACTCAGCAACTAAAGCCGA+GGG + tig0027613:51003-51022 Msa1435110:CDS 45.0%
AATAACCAATCCCTCACCCT+CGG - tig0027613:51022-51041 None:intergenic 45.0%
!! GGGTGAGGGATTGGTTATTA+AGG + tig0027613:51023-51042 Msa1435110:CDS 45.0%
! ATACGCCCTAGCAGCATTTT+TGG + tig0027613:51078-51097 Msa1435110:CDS 45.0%
CAGGTCCAAAAATGCTGCTA+GGG - tig0027613:51086-51105 None:intergenic 45.0%
TTTGGACCTGGTGAAACTGT+TGG + tig0027613:51096-51115 Msa1435110:intron 45.0%
! GAAACTGTTGGTGCCTTCAT+TGG + tig0027613:51108-51127 Msa1435110:intron 45.0%
GTGCCGTGATATGGAAAAAC+TGG + tig0027613:51341-51360 Msa1435110:intron 45.0%
TGCCATCACCAACAATGAAC+TGG - tig0027613:51455-51474 None:intergenic 45.0%
AGCTCGATCAGCACATATGT+GGG - tig0027613:51520-51539 None:intergenic 45.0%
ACCGTTTCAGAAAAAGCTGC+AGG + tig0027613:51555-51574 Msa1435110:CDS 45.0%
TTCAGAAAAAGCTGCAGGAG+AGG + tig0027613:51560-51579 Msa1435110:CDS 45.0%
TCTATCTCAGGGACAAACTC+AGG + tig0027613:51896-51915 Msa1435110:intron 45.0%
CTATCTCAGGGACAAACTCA+GGG + tig0027613:51897-51916 Msa1435110:intron 45.0%
CAATCACCCTCAGTTTGAAC+GGG + tig0027613:51943-51962 Msa1435110:intron 45.0%
AATCACCCTCAGTTTGAACG+GGG + tig0027613:51944-51963 Msa1435110:intron 45.0%
ATCTTTATGCTTGGCCTGCA+AGG - tig0027613:53325-53344 None:intergenic 45.0%
CATGCCAATTGCACATTTGG+TGG + tig0027613:53360-53379 Msa1435110:CDS 45.0%
CACTCCACCAAATGTGCAAT+TGG - tig0027613:53367-53386 None:intergenic 45.0%
! CAATTGCACATTTGGTGGAG+TGG + tig0027613:53365-53384 Msa1435110:CDS 45.0%
GAGTGGATATATAGGCTGCT+TGG + tig0027613:53382-53401 Msa1435110:CDS 45.0%
! GAGGCACCTTCATTCCATAT+GGG - tig0027613:53408-53427 None:intergenic 45.0%
! TGAGGCACCTTCATTCCATA+TGG - tig0027613:53409-53428 None:intergenic 45.0%
!! GTATGATGGGTGCATAGTCA+AGG - tig0027613:53501-53520 None:intergenic 45.0%
! CAGAACCTGTAGAGGTATGA+TGG - tig0027613:53515-53534 None:intergenic 45.0%
AAACGTCACAGAACCTGTAG+AGG - tig0027613:53523-53542 None:intergenic 45.0%
!! TTTTCTTGCAGGAGGGCATA+CGG + tig0027613:53882-53901 Msa1435110:intron 45.0%
GCAGGAAGTTGCAGTAGTTT+AGG + tig0027613:54220-54239 Msa1435110:intron 45.0%
TCAGTGTAACCTGCTAATGC+TGG + tig0027613:54493-54512 Msa1435110:intron 45.0%
CAGTGTAACCTGCTAATGCT+GGG + tig0027613:54494-54513 Msa1435110:intron 45.0%
ATACAACTCCCAGCATTAGC+AGG - tig0027613:54505-54524 None:intergenic 45.0%
AGTGCAATGTGTCCAATAGC+TGG - tig0027613:54999-55018 None:intergenic 45.0%
CTTTCTCAGTTGCCTCATCT+TGG + tig0027613:55141-55160 Msa1435110:CDS 45.0%
CCCTTGCAGAAGGGAATAAT+TGG + tig0027613:55189-55208 Msa1435110:CDS 45.0%
CCCAATTATTCCCTTCTGCA+AGG - tig0027613:55193-55212 None:intergenic 45.0%
AAGTTTGAATCCACGACCTC+AGG - tig0027613:55276-55295 None:intergenic 45.0%
TCTTAAGTGAAAAGGCTCCC+AGG - tig0027613:55358-55377 None:intergenic 45.0%
TCGCTTTCTCTCATGTTGTG+TGG + tig0027613:55399-55418 Msa1435110:intron 45.0%
TGATACAGGGAATTCCAACG+TGG - tig0027613:55703-55722 None:intergenic 45.0%
! TGTAAACTTGCTCGGAGTAG+AGG + tig0027613:55783-55802 Msa1435110:three_prime_UTR 45.0%
CCCAATCTAAATAGCTTCCC+AGG - tig0027613:55896-55915 None:intergenic 45.0%
GTTTGCCGATGCCCTTATAT+GGG + tig0027613:55953-55972 Msa1435110:three_prime_UTR 45.0%
! CACATCCCATATAAGGGCAT+CGG - tig0027613:55961-55980 None:intergenic 45.0%
GCCCTTATATGGGATGTGAT+TGG + tig0027613:55963-55982 Msa1435110:three_prime_UTR 45.0%
GCGGACAACACGAAAGAGTA+AGG - tig0027613:49977-49996 None:intergenic 50.0%
!! TAATGGTGATGGAACCGTCG+CGG - tig0027613:49996-50015 None:intergenic 50.0%
CGACGGTTCCATCACCATTA+CGG + tig0027613:49996-50015 Msa1435110:five_prime_UTR 50.0%
TATCGCAGCCGTAATGGTGA+TGG - tig0027613:50007-50026 None:intergenic 50.0%
GAGAGATATCGCAGCCGTAA+TGG - tig0027613:50013-50032 None:intergenic 50.0%
!! GGCTTGCAGTTGGTGAATCT+CGG - tig0027613:50079-50098 None:intergenic 50.0%
CACCCGAAAGTAGAGAAGGT+AGG - tig0027613:50121-50140 None:intergenic 50.0%
CTCGGTCAAGCTTTACACTC+CGG + tig0027613:50347-50366 Msa1435110:CDS 50.0%
GGAGACATATTGAGCACGAC+CGG - tig0027613:50369-50388 None:intergenic 50.0%
!! GTAGGTACCGAAGGTGGATA+AGG - tig0027613:50786-50805 None:intergenic 50.0%
!! GGTAAAGTAGGTACCGAAGG+TGG - tig0027613:50792-50811 None:intergenic 50.0%
TAGGGCGTATGCAACATGTC+AGG - tig0027613:51068-51087 None:intergenic 50.0%
CCAGGTCCAAAAATGCTGCT+AGG - tig0027613:51087-51106 None:intergenic 50.0%
!! CCTAGCAGCATTTTTGGACC+TGG + tig0027613:51084-51103 Msa1435110:CDS 50.0%
! AAGGCACCAACAGTTTCACC+AGG - tig0027613:51105-51124 None:intergenic 50.0%
! TTGGTTGATGCTGCAAAGGC+AGG + tig0027613:51127-51146 Msa1435110:intron 50.0%
! TGGTTGATGCTGCAAAGGCA+GGG + tig0027613:51128-51147 Msa1435110:intron 50.0%
TGCAAAGGCAGGGAAATCCA+AGG + tig0027613:51138-51157 Msa1435110:intron 50.0%
GAGCTCGATCAGCACATATG+TGG - tig0027613:51521-51540 None:intergenic 50.0%
! TGATCGAGCTCTAGCTTCAG+AGG + tig0027613:51530-51549 Msa1435110:CDS 50.0%
! GATCGAGCTCTAGCTTCAGA+GGG + tig0027613:51531-51550 Msa1435110:CDS 50.0%
TTGTTAGGATGTCAGCCCAC+TGG - tig0027613:51852-51871 None:intergenic 50.0%
! GTGTCTGACAAGCTTGCTCT+TGG + tig0027613:51919-51938 Msa1435110:intron 50.0%
ATCACCCTCAGTTTGAACGG+GGG + tig0027613:51945-51964 Msa1435110:intron 50.0%
ATAGCCCCCGTTCAAACTGA+GGG - tig0027613:51952-51971 None:intergenic 50.0%
AATAGCCCCCGTTCAAACTG+AGG - tig0027613:51953-51972 None:intergenic 50.0%
GCTGGCATGTGACTATACTG+AGG + tig0027613:52651-52670 Msa1435110:intron 50.0%
TATAGGCTGCTTGGCCCATA+TGG + tig0027613:53391-53410 Msa1435110:CDS 50.0%
GCTTGGCCCATATGGAATGA+AGG + tig0027613:53399-53418 Msa1435110:CDS 50.0%
ATTCTTGAAGGGGTCAGCTG+AGG - tig0027613:53427-53446 None:intergenic 50.0%
! TGATGGGTGCATAGTCAAGG+CGG - tig0027613:53498-53517 None:intergenic 50.0%
TGCACCCATCATACCTCTAC+AGG + tig0027613:53507-53526 Msa1435110:CDS 50.0%
GAACACCCCGTACAAGAAGT+AGG - tig0027613:53836-53855 None:intergenic 50.0%
ACGTGTCAGCAACTGCAATG+TGG - tig0027613:54569-54588 None:intergenic 50.0%
CAGTTGCTGACACGTTGCTT+TGG + tig0027613:54574-54593 Msa1435110:intron 50.0%
! TGCTGACACGTTGCTTTGGA+AGG + tig0027613:54578-54597 Msa1435110:CDS 50.0%
TCTGCTCGTTCTTAGCTTCC+TGG + tig0027613:55337-55356 Msa1435110:CDS 50.0%
CTGCTCGTTCTTAGCTTCCT+GGG + tig0027613:55338-55357 Msa1435110:CDS 50.0%
GGTTTGCCGATGCCCTTATA+TGG + tig0027613:55952-55971 Msa1435110:three_prime_UTR 50.0%
TGGCAAAGGCTCCTTTGAGT+CGG + tig0027613:56078-56097 Msa1435110:three_prime_UTR 50.0%
CTCTTTCGTGTTGTCCGCGA+CGG + tig0027613:49979-49998 Msa1435110:five_prime_UTR 55.0%
! GACGACAGTCGCCTTTTGTG+AGG - tig0027613:50035-50054 None:intergenic 55.0%
AAAGGCGACTGTCGTCGCAA+CGG + tig0027613:50039-50058 Msa1435110:five_prime_UTR 55.0%
!! GCAGTTGGTGAATCTCGGTG+CGG - tig0027613:50074-50093 None:intergenic 55.0%
TCACCAACTGCAAGCCTCAG+CGG + tig0027613:50083-50102 Msa1435110:five_prime_UTR 55.0%
CGGACACCCGAAAGTAGAGA+AGG - tig0027613:50125-50144 None:intergenic 55.0%
GCATTTGATTATGGCGGCGG+CGG + tig0027613:50178-50197 Msa1435110:exon 55.0%
GAAAGGTGGTGTGTGGTCAC+CGG + tig0027613:50203-50222 Msa1435110:CDS 55.0%
!! TGTGTCCGCATCGCCGATTT+GGG + tig0027613:50284-50303 Msa1435110:CDS 55.0%
TGGATCCCAAATCGGCGATG+CGG - tig0027613:50292-50311 None:intergenic 55.0%
AGCAACTAAAGCCGAGGGTG+AGG + tig0027613:51008-51027 Msa1435110:CDS 55.0%
GCAACTAAAGCCGAGGGTGA+GGG + tig0027613:51009-51028 Msa1435110:CDS 55.0%
TAAAGCCGAGGGTGAGGGAT+TGG + tig0027613:51014-51033 Msa1435110:CDS 55.0%
TTTGATTATGGCGGCGGCGG+AGG + tig0027613:50181-50200 Msa1435110:exon 60.0%
AGCAGCAAAGCCTCGTCCTC+CGG - tig0027613:50225-50244 None:intergenic 60.0%
ATCGGCGATGCGGACACAGT+AGG - tig0027613:50282-50301 None:intergenic 60.0%
! CTGTGTCCGCATCGCCGATT+TGG + tig0027613:50283-50302 Msa1435110:CDS 60.0%
! TCTTGCAGGAGGGCATACGG+AGG + tig0027613:53885-53904 Msa1435110:intron 60.0%
TTATGGCGGCGGCGGAGGAA+AGG + tig0027613:50186-50205 Msa1435110:exon 65.0%
GGCGGAGGAAAGGTGGTGTG+TGG + tig0027613:50196-50215 Msa1435110:CDS 65.0%
AGGTGGTGTGTGGTCACCGG+AGG + tig0027613:50206-50225 Msa1435110:CDS 65.0%
TGTGTGGTCACCGGAGGACG+AGG + tig0027613:50212-50231 Msa1435110:CDS 65.0%
GCGCCGCTGAGGCTTGCAGT+TGG - tig0027613:50089-50108 None:intergenic 70.0%
GGACGTGGATCGCGCCGCTG+AGG - tig0027613:50100-50119 None:intergenic 75.0%
TGGCGGCGGCGGAGGAAAGG+TGG + tig0027613:50189-50208 Msa1435110:CDS 75.0%
Chromosome Type Strat End Strand Name
tig0027613 gene 49924 56255 49924 ID=Msa1435110;Name=Msa1435110
tig0027613 mRNA 49924 56255 49924 ID=Msa1435110-mRNA-1;Parent=Msa1435110;Name=Msa1435110-mRNA-1;_AED=0.08;_eAED=0.08;_QI=244|0.91|0.92|1|0.91|0.84|13|625|546
tig0027613 exon 49924 50104 49924 ID=Msa1435110-mRNA-1:exon:9471;Parent=Msa1435110-mRNA-1
tig0027613 exon 50125 50422 50125 ID=Msa1435110-mRNA-1:exon:9472;Parent=Msa1435110-mRNA-1
tig0027613 exon 50498 50587 50498 ID=Msa1435110-mRNA-1:exon:9473;Parent=Msa1435110-mRNA-1
tig0027613 exon 50664 50797 50664 ID=Msa1435110-mRNA-1:exon:9474;Parent=Msa1435110-mRNA-1
tig0027613 exon 50991 51113 50991 ID=Msa1435110-mRNA-1:exon:9475;Parent=Msa1435110-mRNA-1
tig0027613 exon 51456 51581 51456 ID=Msa1435110-mRNA-1:exon:9476;Parent=Msa1435110-mRNA-1
tig0027613 exon 52234 52313 52234 ID=Msa1435110-mRNA-1:exon:9477;Parent=Msa1435110-mRNA-1
tig0027613 exon 53330 53528 53330 ID=Msa1435110-mRNA-1:exon:9478;Parent=Msa1435110-mRNA-1
tig0027613 exon 53893 54004 53893 ID=Msa1435110-mRNA-1:exon:9479;Parent=Msa1435110-mRNA-1
tig0027613 exon 54577 54751 54577 ID=Msa1435110-mRNA-1:exon:9480;Parent=Msa1435110-mRNA-1
tig0027613 exon 55070 55226 55070 ID=Msa1435110-mRNA-1:exon:9481;Parent=Msa1435110-mRNA-1
tig0027613 exon 55326 55392 55326 ID=Msa1435110-mRNA-1:exon:9482;Parent=Msa1435110-mRNA-1
tig0027613 exon 55488 56255 55488 ID=Msa1435110-mRNA-1:exon:9483;Parent=Msa1435110-mRNA-1
tig0027613 five_prime_UTR 49924 50104 49924 ID=Msa1435110-mRNA-1:five_prime_utr;Parent=Msa1435110-mRNA-1
tig0027613 five_prime_UTR 50125 50187 50125 ID=Msa1435110-mRNA-1:five_prime_utr;Parent=Msa1435110-mRNA-1
tig0027613 CDS 50188 50422 50188 ID=Msa1435110-mRNA-1:cds;Parent=Msa1435110-mRNA-1
tig0027613 CDS 50498 50587 50498 ID=Msa1435110-mRNA-1:cds;Parent=Msa1435110-mRNA-1
tig0027613 CDS 50664 50797 50664 ID=Msa1435110-mRNA-1:cds;Parent=Msa1435110-mRNA-1
tig0027613 CDS 50991 51113 50991 ID=Msa1435110-mRNA-1:cds;Parent=Msa1435110-mRNA-1
tig0027613 CDS 51456 51581 51456 ID=Msa1435110-mRNA-1:cds;Parent=Msa1435110-mRNA-1
tig0027613 CDS 52234 52313 52234 ID=Msa1435110-mRNA-1:cds;Parent=Msa1435110-mRNA-1
tig0027613 CDS 53330 53528 53330 ID=Msa1435110-mRNA-1:cds;Parent=Msa1435110-mRNA-1
tig0027613 CDS 53893 54004 53893 ID=Msa1435110-mRNA-1:cds;Parent=Msa1435110-mRNA-1
tig0027613 CDS 54577 54751 54577 ID=Msa1435110-mRNA-1:cds;Parent=Msa1435110-mRNA-1
tig0027613 CDS 55070 55226 55070 ID=Msa1435110-mRNA-1:cds;Parent=Msa1435110-mRNA-1
tig0027613 CDS 55326 55392 55326 ID=Msa1435110-mRNA-1:cds;Parent=Msa1435110-mRNA-1
tig0027613 CDS 55488 55630 55488 ID=Msa1435110-mRNA-1:cds;Parent=Msa1435110-mRNA-1
tig0027613 three_prime_UTR 55631 56255 55631 ID=Msa1435110-mRNA-1:three_prime_utr;Parent=Msa1435110-mRNA-1
Gene Sequence

>Msa1435110

ATGGCGGCGGCGGAGGAAAGGTGGTGTGTGGTCACCGGAGGACGAGGCTTTGCTGCTCGTCATTTAGTCGAAATGCTAATCCGATTGAACACCTACTGTGTCCGCATCGCCGATTTGGGATCCACCATTGAACTTGAACCCTCTGAGCAATTAGGTCTTCTCGGTCAAGCTTTACACTCCGGTCGTGCTCAATATGTCTCCGTCGATCTTCGCAACAAACCTCAACTCTTAAAAGCATTTGAAGGAGTTGAGGTTGTTTTCCATATGGCTGCTCCAAATTCTTCTTTAAACAACTACCAGCTTCATCATTCCGTCAATGTTGAAGGAACAAAGAATGTTATTGATGCTTGTGTTGAGTTAAAAGTGAAGAGACTCGTTTATACTAGTTCTCCCAGTGTTGTTTTTGATGGAATTCATGGAATTCATAATGGAAGTGAATCGTTGCCTTATCCACCTTCGCATAATGATCATTACTCAGCAACTAAAGCCGAGGGTGAGGGATTGGTTATTAAGGCTAATGGGACTAGTGGACTCCTGACATGTTGCATACGCCCTAGCAGCATTTTTGGACCTGGTGAAACTTTCATTGTTGGTGATGGCAATAACGTATACGATTTCACATATGTTGAAAATGTGGCTCATGCCCACATATGTGCTGATCGAGCTCTAGCTTCAGAGGGAACCGTTTCAGAAAAAGCTGCAGGAGAGGCATATTTCATTACGAATATGGAACCTATAAAGTTTTGGGAGTTCATGTCTCTAATTTTGGAAGGTCTTGGATATCAAAGGCCAAGCATAAAGATCCCTGTCTTTGTTATCATGCCAATTGCACATTTGGTGGAGTGGATATATAGGCTGCTTGGCCCATATGGAATGAAGGTGCCTCAGCTGACCCCTTCAAGAATAAGACTCACATCTTGCACCAGATCTTTTGATTGCTCAAAAGCAAAGGACCGCCTTGACTATGCACCCATCATACCTCTACAGGAGGGCATACGGAGGACAATCGAATCATATCCACATTTGAGGGCCGAAAATCAACTTAAGTCTAAAAGAGAAGGTCCCTCCAAAGCTTCTGTATATCTTGGAAGTGGAAGAGTTGCTGACACGTTGCTTTGGAAGGATAAAAAGCAAACTTTCACTACATTGTTAGTCTTCATAGCAATATATGTGAACTTCATTGCATCTGAGAATACCTTCATTACTGCTCTTACAAAGCTTCTATTATACTCATCGATCGGTTTATTCATTCATGGCATTCTTCCTGCAAAAATATTGGGGTACACTGTTGAGAAAATGCCCACATCATGGTTTCACTTATCAGAAGATATTTCAAATCAAATTGCTTTCTCAGTTGCCTCATCTTGGAATTTTGCTGTGAATGCATTAAAATCCCTTGCAGAAGGGAATAATTGGGTGATGTTTTTCAAGGTTGTTTTCACTCTGCTCGTTCTTAGCTTCCTGGGAGCCTTTTCACTTAAGAACTTGTATACTATAGGACTCACCTTAGCATTTACAGCTTTCTACGTTTATGAAAAAAAGGAGGAAGACATTGACGGCATATTTTTAAAATCACATACTTTTGGATGCAAATTGATATCTGATCTTACCAAGAAGTTTGTTACTTCAAAGATTGATTGA
Protein sequence

>Msa1435110

MAAAEERWCVVTGGRGFAARHLVEMLIRLNTYCVRIADLGSTIELEPSEQLGLLGQALHSGRAQYVSVDLRNKPQLLKAFEGVEVVFHMAAPNSSLNNYQLHHSVNVEGTKNVIDACVELKVKRLVYTSSPSVVFDGIHGIHNGSESLPYPPSHNDHYSATKAEGEGLVIKANGTSGLLTCCIRPSSIFGPGETFIVGDGNNVYDFTYVENVAHAHICADRALASEGTVSEKAAGEAYFITNMEPIKFWEFMSLILEGLGYQRPSIKIPVFVIMPIAHLVEWIYRLLGPYGMKVPQLTPSRIRLTSCTRSFDCSKAKDRLDYAPIIPLQEGIRRTIESYPHLRAENQLKSKREGPSKASVYLGSGRVADTLLWKDKKQTFTTLLVFIAIYVNFIASENTFITALTKLLLYSSIGLFIHGILPAKILGYTVEKMPTSWFHLSEDISNQIAFSVASSWNFAVNALKSLAEGNNWVMFFKVVFTLLVLSFLGAFSLKNLYTIGLTLAFTAFYVYEKKEEDIDGIFLKSHTFGCKLISDLTKKFVTSKID*