Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0034530 | XP_003591659.2 | 99.345 | 458 | 3 | 0 | 1 | 458 | 1 | 458 | 0.0 | 941 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0034530 | sp|Q9P2S5|WRP73_HUMAN | 45.598 | 443 | 235 | 5 | 1 | 441 | 1 | 439 | 1.15e-146 | 429 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0034530 | Msa0046840 | 0.810405 | 1.171640e-50 | -8.615850e-47 |
| Msa0034530 | Msa0129760 | 0.977417 | 9.731304e-144 | -8.615850e-47 |
| Msa0034530 | Msa0260040 | 0.995872 | 8.207343e-221 | -8.615850e-47 |
| Msa0034530 | Msa0278840 | 0.800282 | 1.550850e-48 | -8.615850e-47 |
| Msa0034530 | Msa0603290 | 0.802473 | 5.517508e-49 | -8.615850e-47 |
| Msa0034530 | Msa1240940 | 0.813843 | 2.084971e-51 | -8.615850e-47 |
| Msa0034530 | Msa1395260 | 0.979310 | 1.093681e-147 | -8.615850e-47 |
| Msa0034530 | Msa1435110 | 0.814696 | 1.350750e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0034530 | MtrunA17_Chr1g0196901 | 99.345 | 458 | 3 | 0 | 1 | 458 | 1 | 458 | 0.0 | 941 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0034530 | AT5G07590.2 | 82.096 | 458 | 82 | 0 | 1 | 458 | 1 | 458 | 0.0 | 798 |
| Msa0034530 | AT5G07590.1 | 82.096 | 458 | 82 | 0 | 1 | 458 | 1 | 458 | 0.0 | 798 |
| Msa0034530 | AT5G07590.3 | 82.096 | 458 | 82 | 0 | 1 | 458 | 1 | 458 | 0.0 | 798 |
| Msa0034530 | AT5G07590.4 | 81.186 | 388 | 73 | 0 | 71 | 458 | 1 | 388 | 0.0 | 674 |
Find 151 sgRNAs with CRISPR-Local
Find 403 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCTCCCTGTGGTCAGTTTC+TGG | 0.169179 | 1_1:-62575248 | Msa0034530:CDS |
| ACGATAGTTCTATAGTAATA+TGG | 0.234418 | 1_1:-62576951 | Msa0034530:CDS |
| CAGCTTACCGATTCCTTGTT+TGG | 0.246089 | 1_1:+62574663 | None:intergenic |
| AGCTTACCGATTCCTTGTTT+GGG | 0.251983 | 1_1:+62574664 | None:intergenic |
| GTTGCCAAAGCATGCTTCTA+AGG | 0.256616 | 1_1:-62577127 | Msa0034530:CDS |
| TTGTCATTCATGGGAAATAA+TGG | 0.260909 | 1_1:-62577025 | Msa0034530:CDS |
| TTCACTAGATTCTGGCAATA+AGG | 0.264051 | 1_1:+62573707 | None:intergenic |
| ACCGAATCATTGTTAGAGTT+TGG | 0.271747 | 1_1:+62573256 | None:intergenic |
| TCTTCCAAGTTAAATGATTC+AGG | 0.272275 | 1_1:+62575194 | None:intergenic |
| GTAAGTATGTGACGACTATC+TGG | 0.283995 | 1_1:+62577216 | None:intergenic |
| ATCTGTTATCTTGTCATTCA+TGG | 0.293790 | 1_1:-62577035 | Msa0034530:CDS |
| TCTTGCATGTCCACTCTGGC+TGG | 0.314236 | 1_1:+62577280 | None:intergenic |
| TTGTGATGACATTAATTCTA+AGG | 0.319324 | 1_1:-62573315 | Msa0034530:three_prime_UTR |
| CCGATTCCTTGTTTGGGGTT+AGG | 0.323650 | 1_1:+62574670 | None:intergenic |
| TTGAATTTGCGGTGTGATAA+TGG | 0.326728 | 1_1:-62578652 | Msa0034530:exon |
| TTCAGTTGCGTTTAACAGTT+TGG | 0.338480 | 1_1:-62577182 | Msa0034530:CDS |
| GAAAAGTATATGAAACAAAA+AGG | 0.351916 | 1_1:-62578849 | Msa0034530:five_prime_UTR |
| CCCTATCAGAGTGGCAGCTT+GGG | 0.363366 | 1_1:-62573913 | Msa0034530:CDS |
| CAAGCATATGAAAGTGGATT+AGG | 0.363542 | 1_1:-62575289 | Msa0034530:CDS |
| TCGTGACACTCTTTCTTTCA+AGG | 0.366996 | 1_1:-62578538 | Msa0034530:intron |
| TTCTGAAATGGTAAATTGAT+TGG | 0.374213 | 1_1:+62574709 | None:intergenic |
| TTACATTCTTATTTCTGATA+AGG | 0.378563 | 1_1:+62573344 | None:intergenic |
| GAGCTATATTCACTAGATTC+TGG | 0.387589 | 1_1:+62573699 | None:intergenic |
| TGGCAGTTGTCTGCTTCTTA+AGG | 0.388500 | 1_1:-62573760 | Msa0034530:CDS |
| GACAGACATTAGATCTGAAA+TGG | 0.390143 | 1_1:+62578816 | None:intergenic |
| ACAAAATTAGCTATATTGAA+TGG | 0.394275 | 1_1:-62577371 | Msa0034530:CDS |
| AAGTGAGTAAAACAAAATTA+TGG | 0.397073 | 1_1:-62573659 | Msa0034530:three_prime_UTR |
| ACCTCATACCTTACTCTAAA+GGG | 0.407625 | 1_1:+62574742 | None:intergenic |
| AGAGTGTCTCTCCTGTTTGT+TGG | 0.409836 | 1_1:-62573535 | Msa0034530:three_prime_UTR |
| GGGGTTTCCTTTACAAGAGA+TGG | 0.414516 | 1_1:-62577105 | Msa0034530:CDS |
| TTGTCTGCTTCTTAAGGATA+AGG | 0.414943 | 1_1:-62573754 | Msa0034530:CDS |
| TGCCATCAGAATTCCACTTC+AGG | 0.415273 | 1_1:+62573778 | None:intergenic |
| CAAGGGCCACGGACTGCATA+TGG | 0.415280 | 1_1:+62575151 | None:intergenic |
| CACTGAATGTTACAAACAAA+CGG | 0.417653 | 1_1:-62578625 | Msa0034530:CDS |
| TCACTAGATTCTGGCAATAA+GGG | 0.418573 | 1_1:+62573708 | None:intergenic |
| CTTACTCTAAAGGGTCGTTC+TGG | 0.420663 | 1_1:+62574751 | None:intergenic |
| AAACGAAACCCTTGAATTTG+CGG | 0.422643 | 1_1:-62578663 | Msa0034530:five_prime_UTR |
| TCCCAAGCTGCCACTCTGAT+AGG | 0.424058 | 1_1:+62573912 | None:intergenic |
| GATTCAGGACTCGCAGCATC+TGG | 0.433237 | 1_1:+62575209 | None:intergenic |
| TGCATTTGGGAAAATTCAAA+AGG | 0.433598 | 1_1:-62573426 | Msa0034530:three_prime_UTR |
| CTGTGGTCAGTTTCTGGCAG+TGG | 0.439090 | 1_1:-62575242 | Msa0034530:CDS |
| CGATAGTTCTATAGTAATAT+GGG | 0.442798 | 1_1:-62576950 | Msa0034530:CDS |
| TCAGCAGGAGGCTTCTGAAA+TGG | 0.444822 | 1_1:+62574697 | None:intergenic |
| TGTCATTCATGGGAAATAAT+GGG | 0.445106 | 1_1:-62577024 | Msa0034530:CDS |
| GAGTGTCTCTCCTGTTTGTT+GGG | 0.453736 | 1_1:-62573534 | Msa0034530:three_prime_UTR |
| AGTGACCAAGCCTGTATCAT+TGG | 0.453814 | 1_1:+62577306 | None:intergenic |
| GTCTCTCCTGTTTGTTGGGT+AGG | 0.457436 | 1_1:-62573530 | Msa0034530:three_prime_UTR |
| CATGTATAAATGTGTGCTTC+CGG | 0.459983 | 1_1:+62573860 | None:intergenic |
| TTATACATGTGGACCCCATC+TGG | 0.460008 | 1_1:-62573846 | Msa0034530:CDS |
| GACAAGATAACAGATTTATA+TGG | 0.464301 | 1_1:+62577043 | None:intergenic |
| CAAAATTAGCTATATTGAAT+GGG | 0.469114 | 1_1:-62577370 | Msa0034530:CDS |
| GCGTTTAACAGTTTGGTCAC+TGG | 0.470789 | 1_1:-62577175 | Msa0034530:CDS |
| TGCTGTTGACACTCTAGACT+TGG | 0.470800 | 1_1:-62576995 | Msa0034530:CDS |
| ACCCTATCAGAGTGGCAGCT+TGG | 0.472760 | 1_1:-62573914 | Msa0034530:CDS |
| ATTATCACACCGCAAATTCA+AGG | 0.473274 | 1_1:+62578654 | None:intergenic |
| AAGCATGCTTTGGCAACTGC+AGG | 0.473367 | 1_1:+62577133 | None:intergenic |
| TTGGGGTTAGGTTTCTCAGC+AGG | 0.473409 | 1_1:+62574682 | None:intergenic |
| TTTCGATAACAGACCTGAAG+TGG | 0.477463 | 1_1:-62573791 | Msa0034530:CDS |
| CTATCTTTATCTTTGTGCAC+CGG | 0.480844 | 1_1:-62573623 | Msa0034530:three_prime_UTR |
| CATTGCGAGTACATATGTAT+TGG | 0.480916 | 1_1:+62574009 | None:intergenic |
| CAGAACGACCCTTTAGAGTA+AGG | 0.481336 | 1_1:-62574750 | Msa0034530:CDS |
| TCCAAACTCTAACAATGATT+CGG | 0.485791 | 1_1:-62573257 | Msa0034530:three_prime_UTR |
| TTGAAAAGACACCTTCCGTC+TGG | 0.486492 | 1_1:+62575316 | None:intergenic |
| TGCAAAACGAAAGGTTTCAC+TGG | 0.486922 | 1_1:+62573445 | None:intergenic |
| GCATATCCTACCCAACAAAC+AGG | 0.490821 | 1_1:+62573524 | None:intergenic |
| ACGGCTAAGAAACGAGCATT+GGG | 0.492449 | 1_1:+62578585 | None:intergenic |
| TGCCTACAGTACTCTGGGTA+TGG | 0.492486 | 1_1:-62573980 | Msa0034530:CDS |
| GGATTCACCACTTGATTACA+AGG | 0.493726 | 1_1:-62576929 | Msa0034530:intron |
| ATAGTATGCCTACAGTACTC+TGG | 0.496387 | 1_1:-62573986 | Msa0034530:CDS |
| TCTGTTATCTTGTCATTCAT+GGG | 0.498192 | 1_1:-62577034 | Msa0034530:CDS |
| TAATGTGAGTGAGTGCAGTT+TGG | 0.500015 | 1_1:+62578755 | None:intergenic |
| GTTATCGAAAATTGTGGTAG+AGG | 0.501423 | 1_1:+62573804 | None:intergenic |
| TGTGGTCAGTTTCTGGCAGT+GGG | 0.509705 | 1_1:-62575241 | Msa0034530:CDS |
| AAGTATCAAGCATATGAAAG+TGG | 0.510080 | 1_1:-62575295 | Msa0034530:CDS |
| TTAATCATGATTAGTGAAAA+CGG | 0.511539 | 1_1:-62578735 | Msa0034530:five_prime_UTR |
| AGAGGATGTACTCAGAATCA+AGG | 0.514760 | 1_1:+62577346 | None:intergenic |
| CTTGCATGTCCACTCTGGCT+GGG | 0.514966 | 1_1:+62577281 | None:intergenic |
| ATCTAATGTCTGTCTTCACT+TGG | 0.521957 | 1_1:-62578807 | Msa0034530:five_prime_UTR |
| GGGTTAGGTTTCTCAGCAGG+AGG | 0.523289 | 1_1:+62574685 | None:intergenic |
| ACTGAATGTTACAAACAAAC+GGG | 0.523630 | 1_1:-62578624 | Msa0034530:CDS |
| GACCTCATACCTTACTCTAA+AGG | 0.524033 | 1_1:+62574741 | None:intergenic |
| GAATTTGAATTTACAACTGA+AGG | 0.526054 | 1_1:+62573562 | None:intergenic |
| TCTATCTTGCATGTCCACTC+TGG | 0.528453 | 1_1:+62577276 | None:intergenic |
| TAGAGGAACATGAACACAAA+AGG | 0.535149 | 1_1:+62573821 | None:intergenic |
| CCCAAGCTGCCACTCTGATA+GGG | 0.538485 | 1_1:+62573913 | None:intergenic |
| TTGCCAAAGCATGCTTCTAA+GGG | 0.541007 | 1_1:-62577126 | Msa0034530:CDS |
| CCTAACCCCAAACAAGGAAT+CGG | 0.541197 | 1_1:-62574670 | Msa0034530:intron |
| TTTCCCAAATGCAAAACGAA+AGG | 0.546608 | 1_1:+62573436 | None:intergenic |
| AAGATAGACGAAGGTCCTGC+TGG | 0.548383 | 1_1:-62577261 | Msa0034530:CDS |
| CGGGTAGGTAAGTGTAGCTA+AGG | 0.549370 | 1_1:-62573603 | Msa0034530:three_prime_UTR |
| AAAAGCCAATGATACAGGCT+TGG | 0.553037 | 1_1:-62577311 | Msa0034530:CDS |
| TACAGCAATCTTAGTGCAGA+AGG | 0.553737 | 1_1:-62573937 | Msa0034530:CDS |
| TAGAGTAAGGTATGAGGTCA+TGG | 0.554199 | 1_1:-62574737 | Msa0034530:CDS |
| GACGGCTAAGAAACGAGCAT+TGG | 0.557333 | 1_1:+62578584 | None:intergenic |
| TGCTTCCGGTGCAGAAAACA+AGG | 0.559234 | 1_1:+62573874 | None:intergenic |
| GAGTCCTGAATCATTTAACT+TGG | 0.564823 | 1_1:-62575198 | Msa0034530:CDS |
| CTGCTGGTATTGCATATGCT+AGG | 0.566820 | 1_1:-62577245 | Msa0034530:CDS |
| GCTTACCGATTCCTTGTTTG+GGG | 0.567226 | 1_1:+62574665 | None:intergenic |
| TGAACACAAAAGGCACCAGA+TGG | 0.567725 | 1_1:+62573831 | None:intergenic |
| TAGTATGCCTACAGTACTCT+GGG | 0.568899 | 1_1:-62573985 | Msa0034530:CDS |
| ATTACTATAGAACTATCGTC+AGG | 0.569340 | 1_1:+62576955 | None:intergenic |
| TTGAAAACAGCAGCATAACA+AGG | 0.569520 | 1_1:+62575133 | None:intergenic |
| TTTATCTTTGTGCACCGGGT+AGG | 0.573724 | 1_1:-62573618 | Msa0034530:three_prime_UTR |
| TTATCACACCGCAAATTCAA+GGG | 0.573877 | 1_1:+62578655 | None:intergenic |
| AGGTCTGTTATCGAAAATTG+TGG | 0.577251 | 1_1:+62573798 | None:intergenic |
| GCATTGGGAGAGAAAGAAGA+AGG | 0.581405 | 1_1:+62578600 | None:intergenic |
| CTGGTATTGCATATGCTAGG+TGG | 0.587823 | 1_1:-62577242 | Msa0034530:CDS |
| GAACACAAAAGGCACCAGAT+GGG | 0.589683 | 1_1:+62573832 | None:intergenic |
| AAAATTATGGTAAATATGAA+CGG | 0.591977 | 1_1:-62573646 | Msa0034530:three_prime_UTR |
| ACCCTTTAGAGTAAGGTATG+AGG | 0.592074 | 1_1:-62574743 | Msa0034530:CDS |
| TAAGTATGTGACGACTATCT+GGG | 0.592440 | 1_1:+62577217 | None:intergenic |
| TATCTTTATCTTTGTGCACC+GGG | 0.593107 | 1_1:-62573622 | Msa0034530:three_prime_UTR |
| CTTAGCTACACTTACCTACC+CGG | 0.593162 | 1_1:+62573604 | None:intergenic |
| GTTCTAATCTATTCTCCAGA+CGG | 0.593469 | 1_1:-62575331 | Msa0034530:CDS |
| AAAACAAGGCGAGTGGATGT+CGG | 0.593540 | 1_1:+62573888 | None:intergenic |
| GTAGCTACCTTGTAATCAAG+TGG | 0.593883 | 1_1:+62576922 | None:intergenic |
| TAATGCATGAAAAGAGAATG+TGG | 0.597472 | 1_1:+62573367 | None:intergenic |
| AAACAGGAGAGACACTCTCA+TGG | 0.600151 | 1_1:+62573540 | None:intergenic |
| GACCTGAAGTGGAATTCTGA+TGG | 0.603890 | 1_1:-62573780 | Msa0034530:CDS |
| TAGACTTGGCTGATGTCGAA+TGG | 0.607385 | 1_1:-62576981 | Msa0034530:CDS |
| TTCCATACCCAGAGTACTGT+AGG | 0.607984 | 1_1:+62573978 | None:intergenic |
| TAATACATGCTCTTACAACA+AGG | 0.608608 | 1_1:+62573393 | None:intergenic |
| AATTTGCAGCGATTTGCACA+AGG | 0.609411 | 1_1:-62577080 | Msa0034530:CDS |
| CACTGCCAGAAACTGACCAC+AGG | 0.612466 | 1_1:+62575243 | None:intergenic |
| GCCAAAGCATGCTTCTAAGG+GGG | 0.613203 | 1_1:-62577124 | Msa0034530:CDS |
| GAGGATGTACTCAGAATCAA+GGG | 0.613958 | 1_1:+62577347 | None:intergenic |
| TAATCTATTCTCCAGACGGA+AGG | 0.615741 | 1_1:-62575327 | Msa0034530:CDS |
| AACACAAAAGGCACCAGATG+GGG | 0.616647 | 1_1:+62573833 | None:intergenic |
| CTAGCATATGCAATACCAGC+AGG | 0.619246 | 1_1:+62577246 | None:intergenic |
| GAGAAACCTAACCCCAAACA+AGG | 0.622655 | 1_1:-62574676 | Msa0034530:CDS |
| AGTTTGGTCACTGGTAAACA+CGG | 0.625331 | 1_1:-62577166 | Msa0034530:CDS |
| CAGCAGCATAACAAGGGCCA+CGG | 0.626787 | 1_1:+62575140 | None:intergenic |
| CTGCATCCATATGCAGTCCG+TGG | 0.627146 | 1_1:-62575157 | Msa0034530:CDS |
| AAACTCTAACAATGATTCGG+TGG | 0.638248 | 1_1:-62573254 | Msa0034530:three_prime_UTR |
| TGCCAAAGCATGCTTCTAAG+GGG | 0.639649 | 1_1:-62577125 | Msa0034530:CDS |
| AATACATGCTCTTACAACAA+GGG | 0.646132 | 1_1:+62573394 | None:intergenic |
| GAAGCACACATTTATACATG+TGG | 0.647516 | 1_1:-62573857 | Msa0034530:CDS |
| GGTGCAGAAAACAAGGCGAG+TGG | 0.648222 | 1_1:+62573881 | None:intergenic |
| ACATTAGATCTGAAATGGAA+CGG | 0.662707 | 1_1:+62578821 | None:intergenic |
| TGAAAACAGCAGCATAACAA+GGG | 0.667308 | 1_1:+62575134 | None:intergenic |
| TCTGACATATCAAGTTGCAG+AGG | 0.678074 | 1_1:+62575018 | None:intergenic |
| GGTCACTGACCCAGCCAGAG+TGG | 0.681334 | 1_1:-62577290 | Msa0034530:CDS |
| TAGGAGTTAAAAGTGTGTCG+TGG | 0.691808 | 1_1:-62575270 | Msa0034530:CDS |
| ACTGCCAGAAACTGACCACA+GGG | 0.692627 | 1_1:+62575244 | None:intergenic |
| AAAGAGTGTCACGAATGACG+AGG | 0.694631 | 1_1:+62578547 | None:intergenic |
| GAGGCGATAATCAACTGCGA+CGG | 0.694862 | 1_1:+62578566 | None:intergenic |
| TGGACATGCAAGATAGACGA+AGG | 0.697728 | 1_1:-62577270 | Msa0034530:CDS |
| GCAGAAGGACCCTATCAGAG+TGG | 0.712844 | 1_1:-62573922 | Msa0034530:CDS |
| GATTCTGAGTACATCCTCTG+CGG | 0.720327 | 1_1:-62577342 | Msa0034530:CDS |
| TTAGATCTGAAATGGAACGG+TGG | 0.734103 | 1_1:+62578824 | None:intergenic |
| AGTGTGTCGTGGTCTCCCTG+TGG | 0.759227 | 1_1:-62575259 | Msa0034530:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGTATAATAATGTTGTAAAT+AGG | - | chr1_1:62573916-62573935 | Msa0034530:CDS | 15.0% |
| !! | ACAAATACAATAATATATGT+TGG | + | chr1_1:62574502-62574521 | None:intergenic | 15.0% |
| !! | ATATTTGAATTGCTTAAAAT+AGG | + | chr1_1:62575539-62575558 | None:intergenic | 15.0% |
| !!! | ATTTTAAGCAATTCAAATAT+TGG | - | chr1_1:62575539-62575558 | Msa0034530:intron | 15.0% |
| !!! | ATAATTGTTGTGTTTATTTT+AGG | + | chr1_1:62575622-62575641 | None:intergenic | 15.0% |
| !! | TTGAAACTATGTTTAAAAAT+TGG | - | chr1_1:62576208-62576227 | Msa0034530:intron | 15.0% |
| !!! | TTTATTTGATTTAAGCTTTT+TGG | - | chr1_1:62577279-62577298 | Msa0034530:CDS | 15.0% |
| !!! | TTTCTAATTTTACATTTTTC+TGG | - | chr1_1:62577769-62577788 | Msa0034530:intron | 15.0% |
| !! | AAAATTATGGTAAATATGAA+CGG | - | chr1_1:62578468-62578487 | Msa0034530:intron | 15.0% |
| !!! | GAAAAGTATATGAAACAAAA+AGG | - | chr1_1:62573265-62573284 | Msa0034530:three_prime_UTR | 20.0% |
| !! | TTAATCATGATTAGTGAAAA+CGG | - | chr1_1:62573379-62573398 | Msa0034530:three_prime_UTR | 20.0% |
| !! | AAAGAATACAAGAATGTATT+TGG | - | chr1_1:62574564-62574583 | Msa0034530:intron | 20.0% |
| !! | ACAAAATTAGCTATATTGAA+TGG | - | chr1_1:62574743-62574762 | Msa0034530:CDS | 20.0% |
| !! | CAAAATTAGCTATATTGAAT+GGG | - | chr1_1:62574744-62574763 | Msa0034530:CDS | 20.0% |
| !!! | TTTTTTTTCCATTCCATTAA+CGG | + | chr1_1:62575365-62575384 | None:intergenic | 20.0% |
| !! | AGTTAAATCTTATATTCCAT+AGG | - | chr1_1:62575477-62575496 | Msa0034530:intron | 20.0% |
| !! | TTTGTTTGGATTATTAGAAA+GGG | + | chr1_1:62575598-62575617 | None:intergenic | 20.0% |
| !!! | TTTTGTTTGGATTATTAGAA+AGG | + | chr1_1:62575599-62575618 | None:intergenic | 20.0% |
| !!! | TGTTTATTTTAGGTTTTGTT+TGG | + | chr1_1:62575612-62575631 | None:intergenic | 20.0% |
| !!! | TTTTAAACATAGTTTCAAAG+TGG | + | chr1_1:62576206-62576225 | None:intergenic | 20.0% |
| !! | AAAGAAAAATATGAAAACGA+AGG | + | chr1_1:62577328-62577347 | None:intergenic | 20.0% |
| !! | TTAGTTAAAAGAAACTGATA+TGG | + | chr1_1:62577945-62577964 | None:intergenic | 20.0% |
| !! | AAGTGAGTAAAACAAAATTA+TGG | - | chr1_1:62578455-62578474 | Msa0034530:intron | 20.0% |
| !!! | TTACATTCTTATTTCTGATA+AGG | + | chr1_1:62578773-62578792 | None:intergenic | 20.0% |
| ! | GAATTTGATAAAATTCTGTG+TGG | - | chr1_1:62573617-62573636 | Msa0034530:three_prime_UTR | 25.0% |
| ! | AAAAATTGAATCCCATTAGT+GGG | + | chr1_1:62573754-62573773 | None:intergenic | 25.0% |
| ! | ATTATACAACTAACTTCATG+TGG | + | chr1_1:62573904-62573923 | None:intergenic | 25.0% |
| ! | CTAAAATCATTGGAAATAGA+TGG | - | chr1_1:62573990-62574009 | Msa0034530:CDS | 25.0% |
| ! | TTATATCCCAAAAATTTACC+CGG | + | chr1_1:62574328-62574347 | None:intergenic | 25.0% |
| !! | TTCTTTTATGTGAACTTATC+AGG | + | chr1_1:62574550-62574569 | None:intergenic | 25.0% |
| !! | AAATTTTCCATCTCTTGTAA+AGG | + | chr1_1:62575019-62575038 | None:intergenic | 25.0% |
| ! | GACAAGATAACAGATTTATA+TGG | + | chr1_1:62575074-62575093 | None:intergenic | 25.0% |
| !! | ACGATAGTTCTATAGTAATA+TGG | - | chr1_1:62575163-62575182 | Msa0034530:CDS | 25.0% |
| !! | CGATAGTTCTATAGTAATAT+GGG | - | chr1_1:62575164-62575183 | Msa0034530:CDS | 25.0% |
| ! | AGGAAAGAAAAATAGGAATT+AGG | + | chr1_1:62575224-62575243 | None:intergenic | 25.0% |
| !! | TTAACTAGTCTGTGAATTTA+AGG | - | chr1_1:62575304-62575323 | Msa0034530:CDS | 25.0% |
| ! | AAAAATAGCATACAGTTGTT+TGG | - | chr1_1:62575381-62575400 | Msa0034530:intron | 25.0% |
| ! | TTGCTTAAAATAGGATAGAA+TGG | + | chr1_1:62575530-62575549 | None:intergenic | 25.0% |
| ! | GTAGTAAGTGTTTGTTTAAT+AGG | + | chr1_1:62575657-62575676 | None:intergenic | 25.0% |
| ! | TCACACAATTGAAAACAATT+AGG | - | chr1_1:62575770-62575789 | Msa0034530:intron | 25.0% |
| !!! | CATAGACTTTGATTTTGATT+TGG | + | chr1_1:62575813-62575832 | None:intergenic | 25.0% |
| ! | GGCTTAAAAAAAAGGATATT+TGG | + | chr1_1:62575957-62575976 | None:intergenic | 25.0% |
| ! | ATATCAATGTACAATAGACA+TGG | - | chr1_1:62576079-62576098 | Msa0034530:intron | 25.0% |
| ! | AATTGGAGATGAAAAATAGT+TGG | - | chr1_1:62576225-62576244 | Msa0034530:intron | 25.0% |
| ! | ATAGGAATGTCATAATAAGT+TGG | - | chr1_1:62576278-62576297 | Msa0034530:intron | 25.0% |
| ! | AAGCTTTACATGATTGTTAA+GGG | + | chr1_1:62576466-62576485 | None:intergenic | 25.0% |
| ! | TAAGCTTTACATGATTGTTA+AGG | + | chr1_1:62576467-62576486 | None:intergenic | 25.0% |
| ! | TATAGAGAATGTTTCATGAA+TGG | - | chr1_1:62576605-62576624 | Msa0034530:intron | 25.0% |
| ! | GTATAAAACAAAAACGACTA+AGG | + | chr1_1:62576759-62576778 | None:intergenic | 25.0% |
| !!! | GTCGTTTTTGTTTTATACTT+AGG | - | chr1_1:62576761-62576780 | Msa0034530:intron | 25.0% |
| !! | TTTGACACTTTTATTGTTGA+TGG | - | chr1_1:62577014-62577033 | Msa0034530:CDS | 25.0% |
| ! | AAAAGTTTCACATGTATTGT+TGG | - | chr1_1:62577226-62577245 | Msa0034530:CDS | 25.0% |
| !!! | TTCTGAAATGGTAAATTGAT+TGG | + | chr1_1:62577408-62577427 | None:intergenic | 25.0% |
| ! | TCTTAATTCCATTATTTGCA+TGG | - | chr1_1:62577546-62577565 | Msa0034530:intron | 25.0% |
| ! | AGAAACTGAATTATTTCATG+TGG | - | chr1_1:62577578-62577597 | Msa0034530:intron | 25.0% |
| !!! | TTCATGTGGATATTTTTTTC+TGG | - | chr1_1:62577592-62577611 | Msa0034530:intron | 25.0% |
| !!! | TTTCTGGTCAATTTGATTTT+TGG | - | chr1_1:62577608-62577627 | Msa0034530:intron | 25.0% |
| ! | AAAGGATATATCGGTATTAA+GGG | + | chr1_1:62577695-62577714 | None:intergenic | 25.0% |
| ! | CTAAACATGAAAGGATATAT+CGG | + | chr1_1:62577704-62577723 | None:intergenic | 25.0% |
| ! | TAACAATATCATTGGAGATA+AGG | + | chr1_1:62577733-62577752 | None:intergenic | 25.0% |
| ! | GAATCACATAACAATATCAT+TGG | + | chr1_1:62577741-62577760 | None:intergenic | 25.0% |
| ! | TGCAACAAAGAAAGAATATA+TGG | + | chr1_1:62577818-62577837 | None:intergenic | 25.0% |
| !! | ATTCTTTATTGATGATACCT+TGG | - | chr1_1:62577883-62577902 | Msa0034530:intron | 25.0% |
| !!! | CAAGAAAAATCAGTTTTGTT+AGG | + | chr1_1:62578057-62578076 | None:intergenic | 25.0% |
| ! | GAATTTGAATTTACAACTGA+AGG | + | chr1_1:62578555-62578574 | None:intergenic | 25.0% |
| ! | CCTATTAAAAATGAACTCAT+AGG | + | chr1_1:62578615-62578634 | None:intergenic | 25.0% |
| !!! | CCTATGAGTTCATTTTTAAT+AGG | - | chr1_1:62578612-62578631 | Msa0034530:CDS | 25.0% |
| ! | TTGTGATGACATTAATTCTA+AGG | - | chr1_1:62578799-62578818 | Msa0034530:five_prime_UTR | 25.0% |
| ! | ACATTAGATCTGAAATGGAA+CGG | + | chr1_1:62573296-62573315 | None:intergenic | 30.0% |
| CACTGAATGTTACAAACAAA+CGG | - | chr1_1:62573489-62573508 | Msa0034530:three_prime_UTR | 30.0% | |
| ACTGAATGTTACAAACAAAC+GGG | - | chr1_1:62573490-62573509 | Msa0034530:three_prime_UTR | 30.0% | |
| TTTGATAAAATTCTGTGTGG+TGG | - | chr1_1:62573620-62573639 | Msa0034530:three_prime_UTR | 30.0% | |
| ! | TTTTTCCATTTCCATCCAAA+AGG | + | chr1_1:62573713-62573732 | None:intergenic | 30.0% |
| AAAATTGAATCCCATTAGTG+GGG | + | chr1_1:62573753-62573772 | None:intergenic | 30.0% | |
| CAAAAATTGAATCCCATTAG+TGG | + | chr1_1:62573755-62573774 | None:intergenic | 30.0% | |
| ! | AAACATGAAGCTGATGTTTT+AGG | - | chr1_1:62573840-62573859 | Msa0034530:CDS | 30.0% |
| AATGGAGACACTAAAATCAT+TGG | - | chr1_1:62573980-62573999 | Msa0034530:CDS | 30.0% | |
| ! | ATTGGAAATAGATGGATTTG+CGG | - | chr1_1:62573998-62574017 | Msa0034530:CDS | 30.0% |
| AACTTCTTATTGTAGCATGT+TGG | + | chr1_1:62574086-62574105 | None:intergenic | 30.0% | |
| AAAATACCGAGCTTGAAATA+TGG | - | chr1_1:62574200-62574219 | Msa0034530:intron | 30.0% | |
| ! | TGAATACCGGGTAAATTTTT+GGG | - | chr1_1:62574319-62574338 | Msa0034530:intron | 30.0% |
| AGTGCCTGTTGAAATTTAAA+TGG | - | chr1_1:62574368-62574387 | Msa0034530:intron | 30.0% | |
| ! | GTTGCCATTTAAATTTCAAC+AGG | + | chr1_1:62574375-62574394 | None:intergenic | 30.0% |
| AATCGAAAAATGAGCTGAAA+AGG | + | chr1_1:62574424-62574443 | None:intergenic | 30.0% | |
| ! | TATTTGGAACTTTAGTGTCT+AGG | - | chr1_1:62574580-62574599 | Msa0034530:intron | 30.0% |
| CCAAGTATATAATTCACCTA+TGG | + | chr1_1:62574615-62574634 | None:intergenic | 30.0% | |
| CCATAGGTGAATTATATACT+TGG | - | chr1_1:62574612-62574631 | Msa0034530:intron | 30.0% | |
| ! | AATATTTGGAATCTCTCAGA+TGG | + | chr1_1:62574653-62574672 | None:intergenic | 30.0% |
| AGATTCCAAATATTTGCTTC+TGG | - | chr1_1:62574659-62574678 | Msa0034530:intron | 30.0% | |
| ACAAACCAGAAGCAAATATT+TGG | + | chr1_1:62574667-62574686 | None:intergenic | 30.0% | |
| !! | AAATATTTGCTTCTGGTTTG+TGG | - | chr1_1:62574666-62574685 | Msa0034530:intron | 30.0% |
| CTATAAAAAGCCAATGATAC+AGG | - | chr1_1:62574798-62574817 | Msa0034530:intron | 30.0% | |
| ATCTGTTATCTTGTCATTCA+TGG | - | chr1_1:62575079-62575098 | Msa0034530:intron | 30.0% | |
| TCTGTTATCTTGTCATTCAT+GGG | - | chr1_1:62575080-62575099 | Msa0034530:intron | 30.0% | |
| TTGTCATTCATGGGAAATAA+TGG | - | chr1_1:62575089-62575108 | Msa0034530:intron | 30.0% | |
| TGTCATTCATGGGAAATAAT+GGG | - | chr1_1:62575090-62575109 | Msa0034530:intron | 30.0% | |
| ATTACTATAGAACTATCGTC+AGG | + | chr1_1:62575162-62575181 | None:intergenic | 30.0% | |
| GGTTTGAATTGAGATAGAAT+GGG | + | chr1_1:62575344-62575363 | None:intergenic | 30.0% | |
| ATCTCAATTCAAACCGTTAA+TGG | - | chr1_1:62575349-62575368 | Msa0034530:intron | 30.0% | |
| AATTCAAACCGTTAATGGAA+TGG | - | chr1_1:62575354-62575373 | Msa0034530:intron | 30.0% | |
| ACAGTTGTTTGGACAATTTA+TGG | - | chr1_1:62575392-62575411 | Msa0034530:intron | 30.0% | |
| GGGAATATATTCTATACCTA+TGG | + | chr1_1:62575496-62575515 | None:intergenic | 30.0% | |
| AACAACAATGTATACACACT+AGG | + | chr1_1:62575708-62575727 | None:intergenic | 30.0% | |
| ! | TTGTTTTCAATTGTGTGACA+TGG | + | chr1_1:62575768-62575787 | None:intergenic | 30.0% |
| CACAATTGAAAACAATTAGG+CGG | - | chr1_1:62575773-62575792 | Msa0034530:intron | 30.0% | |
| !!! | AGACTTTGATTTTGATTTGG+TGG | + | chr1_1:62575810-62575829 | None:intergenic | 30.0% |
| TCAAATTCAAACACCTCTAA+AGG | - | chr1_1:62575834-62575853 | Msa0034530:intron | 30.0% | |
| ! | TTGTTATTGTTCTTGCATCT+AGG | + | chr1_1:62575877-62575896 | None:intergenic | 30.0% |
| TATCAAATAGCTGACATTGT+AGG | + | chr1_1:62576062-62576081 | None:intergenic | 30.0% | |
| GTATATCACCCATAATGTTT+GGG | - | chr1_1:62576413-62576432 | Msa0034530:intron | 30.0% | |
| AAGGGTCTAGAAAACTAATA+AGG | + | chr1_1:62576448-62576467 | None:intergenic | 30.0% | |
| !!! | TCCTGTTTTTTTTAGACTGA+TGG | - | chr1_1:62576695-62576714 | Msa0034530:intron | 30.0% |
| ACCATCAGTCTAAAAAAAAC+AGG | + | chr1_1:62576699-62576718 | None:intergenic | 30.0% | |
| AAGTATCAAGCATATGAAAG+TGG | - | chr1_1:62576819-62576838 | Msa0034530:intron | 30.0% | |
| TCTTCCAAGTTAAATGATTC+AGG | + | chr1_1:62576923-62576942 | None:intergenic | 30.0% | |
| ! | GATTTTTCTCAAGGAAACAA+TGG | - | chr1_1:62577135-62577154 | Msa0034530:CDS | 30.0% |
| ! | ATTTAAGCTTTTTGGACAGT+TGG | - | chr1_1:62577287-62577306 | Msa0034530:CDS | 30.0% |
| ! | TTGAAGCATTCAAAAGTTAG+AGG | + | chr1_1:62577482-62577501 | None:intergenic | 30.0% |
| ! | AATAATGGAATTAAGAACCC+TGG | + | chr1_1:62577542-62577561 | None:intergenic | 30.0% |
| CCTATTTACCATGCAAATAA+TGG | + | chr1_1:62577557-62577576 | None:intergenic | 30.0% | |
| CCATTATTTGCATGGTAAAT+AGG | - | chr1_1:62577554-62577573 | Msa0034530:intron | 30.0% | |
| GAAAGGATATATCGGTATTA+AGG | + | chr1_1:62577696-62577715 | None:intergenic | 30.0% | |
| GATATTGTTATGTGATTCAC+TGG | - | chr1_1:62577743-62577762 | Msa0034530:intron | 30.0% | |
| TTCCAAGTTATTATGTCCTT+TGG | - | chr1_1:62577839-62577858 | Msa0034530:intron | 30.0% | |
| ATCCAAAGGACATAATAACT+TGG | + | chr1_1:62577844-62577863 | None:intergenic | 30.0% | |
| GAACTAAAGAATCAATCCAA+AGG | + | chr1_1:62577858-62577877 | None:intergenic | 30.0% | |
| !!! | AAAAATCAGTTTTGTTAGGC+GGG | + | chr1_1:62578053-62578072 | None:intergenic | 30.0% |
| !!! | GAAAAATCAGTTTTGTTAGG+CGG | + | chr1_1:62578054-62578073 | None:intergenic | 30.0% |
| !! | ACAAAACTGATTTTTCTTGC+AGG | - | chr1_1:62578058-62578077 | Msa0034530:intron | 30.0% |
| ! | AAACCTTTCGTTTTGCATTT+GGG | - | chr1_1:62578675-62578694 | Msa0034530:five_prime_UTR | 30.0% |
| TGCATTTGGGAAAATTCAAA+AGG | - | chr1_1:62578688-62578707 | Msa0034530:five_prime_UTR | 30.0% | |
| AATACATGCTCTTACAACAA+GGG | + | chr1_1:62578723-62578742 | None:intergenic | 30.0% | |
| TAATACATGCTCTTACAACA+AGG | + | chr1_1:62578724-62578743 | None:intergenic | 30.0% | |
| TAATGCATGAAAAGAGAATG+TGG | + | chr1_1:62578750-62578769 | None:intergenic | 30.0% | |
| TCCAAACTCTAACAATGATT+CGG | - | chr1_1:62578857-62578876 | Msa0034530:five_prime_UTR | 30.0% | |
| GACAGACATTAGATCTGAAA+TGG | + | chr1_1:62573301-62573320 | None:intergenic | 35.0% | |
| ATCTAATGTCTGTCTTCACT+TGG | - | chr1_1:62573307-62573326 | Msa0034530:three_prime_UTR | 35.0% | |
| AAACGAAACCCTTGAATTTG+CGG | - | chr1_1:62573451-62573470 | Msa0034530:three_prime_UTR | 35.0% | |
| TTATCACACCGCAAATTCAA+GGG | + | chr1_1:62573462-62573481 | None:intergenic | 35.0% | |
| ATTATCACACCGCAAATTCA+AGG | + | chr1_1:62573463-62573482 | None:intergenic | 35.0% | |
| TTGAATTTGCGGTGTGATAA+TGG | - | chr1_1:62573462-62573481 | Msa0034530:three_prime_UTR | 35.0% | |
| GGATCCCTTAAATAAAGTCT+CGG | - | chr1_1:62573680-62573699 | Msa0034530:exon | 35.0% | |
| GATCCCTTAAATAAAGTCTC+GGG | - | chr1_1:62573681-62573700 | Msa0034530:exon | 35.0% | |
| ! | GTACCCGAGACTTTATTTAA+GGG | + | chr1_1:62573687-62573706 | None:intergenic | 35.0% |
| TGGATGGAAATGGAAAAATG+TGG | - | chr1_1:62573715-62573734 | Msa0034530:CDS | 35.0% | |
| TCAGTTCTTGTAAGATGTGA+TGG | - | chr1_1:62573867-62573886 | Msa0034530:CDS | 35.0% | |
| TAAGCGAGTCTTCCAAAATT+TGG | - | chr1_1:62573950-62573969 | Msa0034530:CDS | 35.0% | |
| AAGCGAGTCTTCCAAAATTT+GGG | - | chr1_1:62573951-62573970 | Msa0034530:CDS | 35.0% | |
| ! | GTCTTCCAAAATTTGGGTTT+AGG | - | chr1_1:62573957-62573976 | Msa0034530:CDS | 35.0% |
| ! | CCATTCCTAAACCCAAATTT+TGG | + | chr1_1:62573965-62573984 | None:intergenic | 35.0% |
| ! | CCAAAATTTGGGTTTAGGAA+TGG | - | chr1_1:62573962-62573981 | Msa0034530:CDS | 35.0% |
| CATGTTGGATTTCAGATTTG+AGG | + | chr1_1:62574071-62574090 | None:intergenic | 35.0% | |
| ! | TGTGTTTGTTGGATCAAGAT+TGG | + | chr1_1:62574231-62574250 | None:intergenic | 35.0% |
| ! | CTGAATACCGGGTAAATTTT+TGG | - | chr1_1:62574318-62574337 | Msa0034530:intron | 35.0% |
| ! | TGTGCAATTGTTTTCATGCT+TGG | - | chr1_1:62574720-62574739 | Msa0034530:CDS | 35.0% |
| TAAGTATGTGACGACTATCT+GGG | + | chr1_1:62574900-62574919 | None:intergenic | 35.0% | |
| TTCAGTTGCGTTTAACAGTT+TGG | - | chr1_1:62574932-62574951 | Msa0034530:intron | 35.0% | |
| ! | CACAGACTAGTTAAATTCAG+TGG | + | chr1_1:62575298-62575317 | None:intergenic | 35.0% |
| CGGTTTGAATTGAGATAGAA+TGG | + | chr1_1:62575345-62575364 | None:intergenic | 35.0% | |
| TCATACCATTGTTTGAGAAG+TGG | - | chr1_1:62575433-62575452 | Msa0034530:intron | 35.0% | |
| TTCAACCACTTCTCAAACAA+TGG | + | chr1_1:62575441-62575460 | None:intergenic | 35.0% | |
| TGTTTGAGAAGTGGTTGAAA+TGG | - | chr1_1:62575442-62575461 | Msa0034530:intron | 35.0% | |
| AGAATATATTCCCTTACCTC+AGG | - | chr1_1:62575503-62575522 | Msa0034530:intron | 35.0% | |
| TTGTTTCCTTCCTACAAGAT+TGG | - | chr1_1:62575723-62575742 | Msa0034530:intron | 35.0% | |
| ! | ACACCTCTAAAGGAAATGTT+AGG | - | chr1_1:62575844-62575863 | Msa0034530:intron | 35.0% |
| ! | CACCTCTAAAGGAAATGTTA+GGG | - | chr1_1:62575845-62575864 | Msa0034530:intron | 35.0% |
| ! | ATTGTTCTTGCATCTAGGAT+TGG | + | chr1_1:62575872-62575891 | None:intergenic | 35.0% |
| TGTACACCATACGTAATTGA+TGG | + | chr1_1:62575923-62575942 | None:intergenic | 35.0% | |
| GAAATGGGGGCTTAAAAAAA+AGG | + | chr1_1:62575965-62575984 | None:intergenic | 35.0% | |
| TAGAGTCTTACAAGGGAAAT+GGG | + | chr1_1:62575980-62575999 | None:intergenic | 35.0% | |
| ATAGAGTCTTACAAGGGAAA+TGG | + | chr1_1:62575981-62576000 | None:intergenic | 35.0% | |
| ATTTCCCTTGTAAGACTCTA+TGG | - | chr1_1:62575980-62575999 | Msa0034530:intron | 35.0% | |
| GAAGAGCAAAATAGAGAGAT+GGG | - | chr1_1:62576247-62576266 | Msa0034530:intron | 35.0% | |
| AAGAGCAAAATAGAGAGATG+GGG | - | chr1_1:62576248-62576267 | Msa0034530:intron | 35.0% | |
| !! | CCAGTAATTTCGAGTTTGAT+TGG | + | chr1_1:62576365-62576384 | None:intergenic | 35.0% |
| CCAATCAAACTCGAAATTAC+TGG | - | chr1_1:62576362-62576381 | Msa0034530:intron | 35.0% | |
| GTGATATACCAGTAAGTAAC+TGG | + | chr1_1:62576402-62576421 | None:intergenic | 35.0% | |
| GGTATATCACCCATAATGTT+TGG | - | chr1_1:62576412-62576431 | Msa0034530:intron | 35.0% | |
| TCTGTTGACCCAAACATTAT+GGG | + | chr1_1:62576424-62576443 | None:intergenic | 35.0% | |
| ATCTGTTGACCCAAACATTA+TGG | + | chr1_1:62576425-62576444 | None:intergenic | 35.0% | |
| GTTCTAATCTATTCTCCAGA+CGG | - | chr1_1:62576783-62576802 | Msa0034530:intron | 35.0% | |
| ! | CAAGCATATGAAAGTGGATT+AGG | - | chr1_1:62576825-62576844 | Msa0034530:intron | 35.0% |
| GAGTCCTGAATCATTTAACT+TGG | - | chr1_1:62576916-62576935 | Msa0034530:intron | 35.0% | |
| TGAAAACAGCAGCATAACAA+GGG | + | chr1_1:62576983-62577002 | None:intergenic | 35.0% | |
| TTGAAAACAGCAGCATAACA+AGG | + | chr1_1:62576984-62577003 | None:intergenic | 35.0% | |
| ! | TTGAGCGATGATTTTTCTCA+AGG | - | chr1_1:62577126-62577145 | Msa0034530:CDS | 35.0% |
| AAACGAAGGAATGTGTTTCA+TGG | + | chr1_1:62577314-62577333 | None:intergenic | 35.0% | |
| ACCTCATACCTTACTCTAAA+GGG | + | chr1_1:62577375-62577394 | None:intergenic | 35.0% | |
| TTGCATTATGTAGCAAGGAA+GGG | + | chr1_1:62577511-62577530 | None:intergenic | 35.0% | |
| ATTGCATTATGTAGCAAGGA+AGG | + | chr1_1:62577512-62577531 | None:intergenic | 35.0% | |
| GATCATTGCATTATGTAGCA+AGG | + | chr1_1:62577516-62577535 | None:intergenic | 35.0% | |
| ATAATGCAATGATCACTCCA+GGG | - | chr1_1:62577522-62577541 | Msa0034530:intron | 35.0% | |
| AGGTTTACGCTAAACATGAA+AGG | + | chr1_1:62577713-62577732 | None:intergenic | 35.0% | |
| AAAGTGTATTGCAGAAACCA+AGG | + | chr1_1:62577903-62577922 | None:intergenic | 35.0% | |
| GTTTCTGCAATACACTTTGA+TGG | - | chr1_1:62577905-62577924 | Msa0034530:intron | 35.0% | |
| CCAAATGATTCAGTTTGTCT+AGG | + | chr1_1:62577974-62577993 | None:intergenic | 35.0% | |
| CCTAGACAAACTGAATCATT+TGG | - | chr1_1:62577971-62577990 | Msa0034530:intron | 35.0% | |
| !!! | TTCTTGCAGGTTTTTTGTCA+TGG | - | chr1_1:62578071-62578090 | Msa0034530:intron | 35.0% |
| CATTGCGAGTACATATGTAT+TGG | + | chr1_1:62578108-62578127 | None:intergenic | 35.0% | |
| CATGTATAAATGTGTGCTTC+CGG | + | chr1_1:62578257-62578276 | None:intergenic | 35.0% | |
| GAAGCACACATTTATACATG+TGG | - | chr1_1:62578257-62578276 | Msa0034530:intron | 35.0% | |
| TAGAGGAACATGAACACAAA+AGG | + | chr1_1:62578296-62578315 | None:intergenic | 35.0% | |
| GTTATCGAAAATTGTGGTAG+AGG | + | chr1_1:62578313-62578332 | None:intergenic | 35.0% | |
| AGGTCTGTTATCGAAAATTG+TGG | + | chr1_1:62578319-62578338 | None:intergenic | 35.0% | |
| TTGTCTGCTTCTTAAGGATA+AGG | - | chr1_1:62578360-62578379 | Msa0034530:intron | 35.0% | |
| TCACTAGATTCTGGCAATAA+GGG | + | chr1_1:62578409-62578428 | None:intergenic | 35.0% | |
| TTCACTAGATTCTGGCAATA+AGG | + | chr1_1:62578410-62578429 | None:intergenic | 35.0% | |
| GAGCTATATTCACTAGATTC+TGG | + | chr1_1:62578418-62578437 | None:intergenic | 35.0% | |
| CTATCTTTATCTTTGTGCAC+CGG | - | chr1_1:62578491-62578510 | Msa0034530:intron | 35.0% | |
| TATCTTTATCTTTGTGCACC+GGG | - | chr1_1:62578492-62578511 | Msa0034530:intron | 35.0% | |
| ! | GAAACCTTTCGTTTTGCATT+TGG | - | chr1_1:62578674-62578693 | Msa0034530:five_prime_UTR | 35.0% |
| TTTCCCAAATGCAAAACGAA+AGG | + | chr1_1:62578681-62578700 | None:intergenic | 35.0% | |
| ACCGAATCATTGTTAGAGTT+TGG | + | chr1_1:62578861-62578880 | None:intergenic | 35.0% | |
| ! | AAACTCTAACAATGATTCGG+TGG | - | chr1_1:62578860-62578879 | Msa0034530:five_prime_UTR | 35.0% |
| ! | TTAGATCTGAAATGGAACGG+TGG | + | chr1_1:62573293-62573312 | None:intergenic | 40.0% |
| TAATGTGAGTGAGTGCAGTT+TGG | + | chr1_1:62573362-62573381 | None:intergenic | 40.0% | |
| TCGTGACACTCTTTCTTTCA+AGG | - | chr1_1:62573576-62573595 | Msa0034530:three_prime_UTR | 40.0% | |
| ! | CGTACCCGAGACTTTATTTA+AGG | + | chr1_1:62573688-62573707 | None:intergenic | 40.0% |
| TACCGAGCTTGAAATATGGA+TGG | - | chr1_1:62574204-62574223 | Msa0034530:intron | 40.0% | |
| GACCATCCATATTTCAAGCT+CGG | + | chr1_1:62574209-62574228 | None:intergenic | 40.0% | |
| TGTGTCAAATTGTCAACTGC+AGG | - | chr1_1:62574270-62574289 | Msa0034530:intron | 40.0% | |
| GTCTAGGTTTAATGTGCCAT+AGG | - | chr1_1:62574596-62574615 | Msa0034530:intron | 40.0% | |
| AACAATTGCACAACCTGCAT+AGG | + | chr1_1:62574712-62574731 | None:intergenic | 40.0% | |
| GAGGATGTACTCAGAATCAA+GGG | + | chr1_1:62574770-62574789 | None:intergenic | 40.0% | |
| AGAGGATGTACTCAGAATCA+AGG | + | chr1_1:62574771-62574790 | None:intergenic | 40.0% | |
| AAAAGCCAATGATACAGGCT+TGG | - | chr1_1:62574803-62574822 | Msa0034530:intron | 40.0% | |
| GTAAGTATGTGACGACTATC+TGG | + | chr1_1:62574901-62574920 | None:intergenic | 40.0% | |
| AGTTTGGTCACTGGTAAACA+CGG | - | chr1_1:62574948-62574967 | Msa0034530:intron | 40.0% | |
| TTGCCAAAGCATGCTTCTAA+GGG | - | chr1_1:62574988-62575007 | Msa0034530:CDS | 40.0% | |
| AATTTGCAGCGATTTGCACA+AGG | - | chr1_1:62575034-62575053 | Msa0034530:intron | 40.0% | |
| GGATTCACCACTTGATTACA+AGG | - | chr1_1:62575185-62575204 | Msa0034530:CDS | 40.0% | |
| GTAGCTACCTTGTAATCAAG+TGG | + | chr1_1:62575195-62575214 | None:intergenic | 40.0% | |
| GAGGGCTAGGAAAGAAAAAT+AGG | + | chr1_1:62575231-62575250 | None:intergenic | 40.0% | |
| TTATGTTTACCAAGTCTCCC+AGG | + | chr1_1:62575258-62575277 | None:intergenic | 40.0% | |
| ATAGAATGGACCTGAGGTAA+GGG | + | chr1_1:62575516-62575535 | None:intergenic | 40.0% | |
| AATAGGATAGAATGGACCTG+AGG | + | chr1_1:62575522-62575541 | None:intergenic | 40.0% | |
| GACCCTAACATTTCCTTTAG+AGG | + | chr1_1:62575850-62575869 | None:intergenic | 40.0% | |
| TTACGTATGGTGTACACCTT+TGG | - | chr1_1:62575927-62575946 | Msa0034530:intron | 40.0% | |
| TACGTATGGTGTACACCTTT+GGG | - | chr1_1:62575928-62575947 | Msa0034530:intron | 40.0% | |
| AGAGTCTTACAAGGGAAATG+GGG | + | chr1_1:62575979-62575998 | None:intergenic | 40.0% | |
| TGAGCCATAGAGTCTTACAA+GGG | + | chr1_1:62575987-62576006 | None:intergenic | 40.0% | |
| TTGAGCCATAGAGTCTTACA+AGG | + | chr1_1:62575988-62576007 | None:intergenic | 40.0% | |
| ! | CCTTGATGGCAAATATGTGA+AGG | + | chr1_1:62576015-62576034 | None:intergenic | 40.0% |
| CCTTCACATATTTGCCATCA+AGG | - | chr1_1:62576012-62576031 | Msa0034530:intron | 40.0% | |
| CACATATTTGCCATCAAGGT+TGG | - | chr1_1:62576016-62576035 | Msa0034530:intron | 40.0% | |
| !!! | GGATTTTTTGCCAACCTTGA+TGG | + | chr1_1:62576029-62576048 | None:intergenic | 40.0% |
| ! | TCCTCTCTTTCGAGTAACAA+CGG | + | chr1_1:62576132-62576151 | None:intergenic | 40.0% |
| AGAGGATACAATCAACTCAG+TGG | - | chr1_1:62576146-62576165 | Msa0034530:intron | 40.0% | |
| GGAAGAGCAAAATAGAGAGA+TGG | - | chr1_1:62576246-62576265 | Msa0034530:intron | 40.0% | |
| ATGAATGACCAATAGAGGAG+AGG | + | chr1_1:62576338-62576357 | None:intergenic | 40.0% | |
| GAGAGATGAATGACCAATAG+AGG | + | chr1_1:62576343-62576362 | None:intergenic | 40.0% | |
| ACGTTGAACCAGTTACTTAC+TGG | - | chr1_1:62576391-62576410 | Msa0034530:intron | 40.0% | |
| TAATCTATTCTCCAGACGGA+AGG | - | chr1_1:62576787-62576806 | Msa0034530:intron | 40.0% | |
| ! | TAGGAGTTAAAAGTGTGTCG+TGG | - | chr1_1:62576844-62576863 | Msa0034530:intron | 40.0% |
| ATCCACTTCCTGCAATTTCA+GGG | + | chr1_1:62577073-62577092 | None:intergenic | 40.0% | |
| ! | TCTGACATATCAAGTTGCAG+AGG | + | chr1_1:62577099-62577118 | None:intergenic | 40.0% |
| !! | AAACTTTTTCCTGCCAAGAC+GGG | + | chr1_1:62577214-62577233 | None:intergenic | 40.0% |
| !! | GAAACTTTTTCCTGCCAAGA+CGG | + | chr1_1:62577215-62577234 | None:intergenic | 40.0% |
| !! | ACCCTTTAGAGTAAGGTATG+AGG | - | chr1_1:62577371-62577390 | Msa0034530:CDS | 40.0% |
| GACCTCATACCTTACTCTAA+AGG | + | chr1_1:62577376-62577395 | None:intergenic | 40.0% | |
| TAGAGTAAGGTATGAGGTCA+TGG | - | chr1_1:62577377-62577396 | Msa0034530:CDS | 40.0% | |
| !! | AGCTTACCGATTCCTTGTTT+GGG | + | chr1_1:62577453-62577472 | None:intergenic | 40.0% |
| CATAATGCAATGATCACTCC+AGG | - | chr1_1:62577521-62577540 | Msa0034530:intron | 40.0% | |
| ! | AAGGCTTTGATTAAGTCCAG+AGG | + | chr1_1:62578000-62578019 | None:intergenic | 40.0% |
| ATAGTATGCCTACAGTACTC+TGG | - | chr1_1:62578128-62578147 | Msa0034530:intron | 40.0% | |
| TAGTATGCCTACAGTACTCT+GGG | - | chr1_1:62578129-62578148 | Msa0034530:intron | 40.0% | |
| TACAGCAATCTTAGTGCAGA+AGG | - | chr1_1:62578177-62578196 | Msa0034530:intron | 40.0% | |
| TTTCGATAACAGACCTGAAG+TGG | - | chr1_1:62578323-62578342 | Msa0034530:intron | 40.0% | |
| TGCAAAACGAAAGGTTTCAC+TGG | + | chr1_1:62578672-62578691 | None:intergenic | 40.0% | |
| GCATTGGGAGAGAAAGAAGA+AGG | + | chr1_1:62573517-62573536 | None:intergenic | 45.0% | |
| ACGGCTAAGAAACGAGCATT+GGG | + | chr1_1:62573532-62573551 | None:intergenic | 45.0% | |
| !! | AAAGAGTGTCACGAATGACG+AGG | + | chr1_1:62573570-62573589 | None:intergenic | 45.0% |
| GATCTGAGTGAAACTTGACG+CGG | - | chr1_1:62573659-62573678 | Msa0034530:three_prime_UTR | 45.0% | |
| ! | ACGAGCCTTTTGGATGGAAA+TGG | - | chr1_1:62573705-62573724 | Msa0034530:CDS | 45.0% |
| TGAAAGAGCAACCCCACTAA+TGG | - | chr1_1:62573739-62573758 | Msa0034530:CDS | 45.0% | |
| GAAAGAGCAACCCCACTAAT+GGG | - | chr1_1:62573740-62573759 | Msa0034530:CDS | 45.0% | |
| TGGATTTGCGGCAATACTTG+TGG | - | chr1_1:62574010-62574029 | Msa0034530:CDS | 45.0% | |
| GTCAGCACATCTGTGTTTGT+TGG | + | chr1_1:62574242-62574261 | None:intergenic | 45.0% | |
| TTGTCAACTGCAGGCAATCT+TGG | - | chr1_1:62574279-62574298 | Msa0034530:intron | 45.0% | |
| !! | TGGTCAGCAGTTCTGAATAC+CGG | - | chr1_1:62574306-62574325 | Msa0034530:intron | 45.0% |
| TCATTCTTTCCGTCCTATGC+AGG | - | chr1_1:62574696-62574715 | Msa0034530:CDS | 45.0% | |
| ATTGCACAACCTGCATAGGA+CGG | + | chr1_1:62574708-62574727 | None:intergenic | 45.0% | |
| GATTCTGAGTACATCCTCTG+CGG | - | chr1_1:62574772-62574791 | Msa0034530:intron | 45.0% | |
| ! | GCTTTTTATAGAGACCGCAG+AGG | + | chr1_1:62574789-62574808 | None:intergenic | 45.0% |
| AGTGACCAAGCCTGTATCAT+TGG | + | chr1_1:62574811-62574830 | None:intergenic | 45.0% | |
| TCTATCTTGCATGTCCACTC+TGG | + | chr1_1:62574841-62574860 | None:intergenic | 45.0% | |
| TGGACATGCAAGATAGACGA+AGG | - | chr1_1:62574844-62574863 | Msa0034530:intron | 45.0% | |
| CTAGCATATGCAATACCAGC+AGG | + | chr1_1:62574871-62574890 | None:intergenic | 45.0% | |
| CTGCTGGTATTGCATATGCT+AGG | - | chr1_1:62574869-62574888 | Msa0034530:intron | 45.0% | |
| CTGGTATTGCATATGCTAGG+TGG | - | chr1_1:62574872-62574891 | Msa0034530:intron | 45.0% | |
| GCGTTTAACAGTTTGGTCAC+TGG | - | chr1_1:62574939-62574958 | Msa0034530:intron | 45.0% | |
| GTTGCCAAAGCATGCTTCTA+AGG | - | chr1_1:62574987-62575006 | Msa0034530:CDS | 45.0% | |
| TGCCAAAGCATGCTTCTAAG+GGG | - | chr1_1:62574989-62575008 | Msa0034530:CDS | 45.0% | |
| GGGGTTTCCTTTACAAGAGA+TGG | - | chr1_1:62575009-62575028 | Msa0034530:CDS | 45.0% | |
| TGCTGTTGACACTCTAGACT+TGG | - | chr1_1:62575119-62575138 | Msa0034530:intron | 45.0% | |
| TAGACTTGGCTGATGTCGAA+TGG | - | chr1_1:62575133-62575152 | Msa0034530:CDS | 45.0% | |
| TTTCCTAGCCCTCTTAACCT+GGG | - | chr1_1:62575238-62575257 | Msa0034530:CDS | 45.0% | |
| GATAGAATGGACCTGAGGTA+AGG | + | chr1_1:62575517-62575536 | None:intergenic | 45.0% | |
| ! | GCAGATACGAGCTTTTAGTG+AGG | + | chr1_1:62575686-62575705 | None:intergenic | 45.0% |
| TCCTTCCTACAAGATTGGAC+CGG | - | chr1_1:62575728-62575747 | Msa0034530:intron | 45.0% | |
| GTGACATGGTAAGTTGCCAT+TGG | + | chr1_1:62575754-62575773 | None:intergenic | 45.0% | |
| GCAGTGCCATCAATTACGTA+TGG | - | chr1_1:62575914-62575933 | Msa0034530:intron | 45.0% | |
| AAGGATATTTGGCCTCCCAA+AGG | + | chr1_1:62575946-62575965 | None:intergenic | 45.0% | |
| GAGTCTTACAAGGGAAATGG+GGG | + | chr1_1:62575978-62575997 | None:intergenic | 45.0% | |
| GACATTGTAGGTTGCAGTGA+CGG | + | chr1_1:62576050-62576069 | None:intergenic | 45.0% | |
| ACCGTTGTTACTCGAAAGAG+AGG | - | chr1_1:62576128-62576147 | Msa0034530:intron | 45.0% | |
| GAGAGATGGGGAGATAGTAT+AGG | - | chr1_1:62576260-62576279 | Msa0034530:intron | 45.0% | |
| CTCATAGTCCTCTCCTCTAT+TGG | - | chr1_1:62576327-62576346 | Msa0034530:intron | 45.0% | |
| AGCTTCACTGAGCTATGATC+AGG | - | chr1_1:62576487-62576506 | Msa0034530:intron | 45.0% | |
| GCTTCACTGAGCTATGATCA+GGG | - | chr1_1:62576488-62576507 | Msa0034530:intron | 45.0% | |
| CTTCACTGAGCTATGATCAG+GGG | - | chr1_1:62576489-62576508 | Msa0034530:intron | 45.0% | |
| TCAACGGACATGAGAGTCAA+TGG | - | chr1_1:62576520-62576539 | Msa0034530:intron | 45.0% | |
| GACATGAGAGTCAATGGACA+GGG | - | chr1_1:62576526-62576545 | Msa0034530:intron | 45.0% | |
| ACATGAGAGTCAATGGACAG+GGG | - | chr1_1:62576527-62576546 | Msa0034530:intron | 45.0% | |
| TTGAAAAGACACCTTCCGTC+TGG | + | chr1_1:62576801-62576820 | None:intergenic | 45.0% | |
| TACCATGTCCCTGAAATTGC+AGG | - | chr1_1:62577062-62577081 | Msa0034530:CDS | 45.0% | |
| TTCCTGCAATTTCAGGGACA+TGG | + | chr1_1:62577067-62577086 | None:intergenic | 45.0% | |
| CATCCACTTCCTGCAATTTC+AGG | + | chr1_1:62577074-62577093 | None:intergenic | 45.0% | |
| ! | CTTACTCTAAAGGGTCGTTC+TGG | + | chr1_1:62577366-62577385 | None:intergenic | 45.0% |
| !! | CAGAACGACCCTTTAGAGTA+AGG | - | chr1_1:62577364-62577383 | Msa0034530:CDS | 45.0% |
| GAGAAACCTAACCCCAAACA+AGG | - | chr1_1:62577438-62577457 | Msa0034530:intron | 45.0% | |
| CCTAACCCCAAACAAGGAAT+CGG | - | chr1_1:62577444-62577463 | Msa0034530:intron | 45.0% | |
| !! | GCTTACCGATTCCTTGTTTG+GGG | + | chr1_1:62577452-62577471 | None:intergenic | 45.0% |
| !! | CAGCTTACCGATTCCTTGTT+TGG | + | chr1_1:62577454-62577473 | None:intergenic | 45.0% |
| AGCATGAGATAGAGCAGATC+TGG | - | chr1_1:62577645-62577664 | Msa0034530:intron | 45.0% | |
| CTGAATCATTTGGTTGCCTC+TGG | - | chr1_1:62577981-62578000 | Msa0034530:intron | 45.0% | |
| !! | TTCCATACCCAGAGTACTGT+AGG | + | chr1_1:62578139-62578158 | None:intergenic | 45.0% |
| AAAACAAGGCGAGTGGATGT+CGG | + | chr1_1:62578229-62578248 | None:intergenic | 45.0% | |
| TTATACATGTGGACCCCATC+TGG | - | chr1_1:62578268-62578287 | Msa0034530:intron | 45.0% | |
| !! | AACACAAAAGGCACCAGATG+GGG | + | chr1_1:62578284-62578303 | None:intergenic | 45.0% |
| !! | GAACACAAAAGGCACCAGAT+GGG | + | chr1_1:62578285-62578304 | None:intergenic | 45.0% |
| !! | TGAACACAAAAGGCACCAGA+TGG | + | chr1_1:62578286-62578305 | None:intergenic | 45.0% |
| GACCTGAAGTGGAATTCTGA+TGG | - | chr1_1:62578334-62578353 | Msa0034530:intron | 45.0% | |
| TGCCATCAGAATTCCACTTC+AGG | + | chr1_1:62578339-62578358 | None:intergenic | 45.0% | |
| TGGCAGTTGTCTGCTTCTTA+AGG | - | chr1_1:62578354-62578373 | Msa0034530:intron | 45.0% | |
| TTTATCTTTGTGCACCGGGT+AGG | - | chr1_1:62578496-62578515 | Msa0034530:intron | 45.0% | |
| CTTAGCTACACTTACCTACC+CGG | + | chr1_1:62578513-62578532 | None:intergenic | 45.0% | |
| AAACAGGAGAGACACTCTCA+TGG | + | chr1_1:62578577-62578596 | None:intergenic | 45.0% | |
| ! | AGAGTGTCTCTCCTGTTTGT+TGG | - | chr1_1:62578579-62578598 | Msa0034530:CDS | 45.0% |
| GAGTGTCTCTCCTGTTTGTT+GGG | - | chr1_1:62578580-62578599 | Msa0034530:CDS | 45.0% | |
| GCATATCCTACCCAACAAAC+AGG | + | chr1_1:62578593-62578612 | None:intergenic | 45.0% | |
| GACGGCTAAGAAACGAGCAT+TGG | + | chr1_1:62573533-62573552 | None:intergenic | 50.0% | |
| GAGGCGATAATCAACTGCGA+CGG | + | chr1_1:62573551-62573570 | None:intergenic | 50.0% | |
| TCACGCAGTCAGCATATCTG+TGG | - | chr1_1:62574114-62574133 | Msa0034530:intron | 50.0% | |
| GTGGCCGTTGGATTGAAGAT+CGG | - | chr1_1:62574133-62574152 | Msa0034530:intron | 50.0% | |
| CCGTCCGATCTTCAATCCAA+CGG | + | chr1_1:62574140-62574159 | None:intergenic | 50.0% | |
| CCGTTGGATTGAAGATCGGA+CGG | - | chr1_1:62574137-62574156 | Msa0034530:intron | 50.0% | |
| CTGCAGGCAATCTTGGTTCA+TGG | - | chr1_1:62574286-62574305 | Msa0034530:intron | 50.0% | |
| !! | GGTCAGCAGTTCTGAATACC+GGG | - | chr1_1:62574307-62574326 | Msa0034530:intron | 50.0% |
| AAGATAGACGAAGGTCCTGC+TGG | - | chr1_1:62574853-62574872 | Msa0034530:intron | 50.0% | |
| AAGCATGCTTTGGCAACTGC+AGG | + | chr1_1:62574984-62575003 | None:intergenic | 50.0% | |
| ! | GCCAAAGCATGCTTCTAAGG+GGG | - | chr1_1:62574990-62575009 | Msa0034530:CDS | 50.0% |
| ! | ACCCCCTTAGAAGCATGCTT+TGG | + | chr1_1:62574994-62575013 | None:intergenic | 50.0% |
| CTTTCCTAGCCCTCTTAACC+TGG | - | chr1_1:62575237-62575256 | Msa0034530:CDS | 50.0% | |
| CCAAGTCTCCCAGGTTAAGA+GGG | + | chr1_1:62575249-62575268 | None:intergenic | 50.0% | |
| ACCAAGTCTCCCAGGTTAAG+AGG | + | chr1_1:62575250-62575269 | None:intergenic | 50.0% | |
| ATTGGCCGGTCCAATCTTGT+AGG | + | chr1_1:62575736-62575755 | None:intergenic | 50.0% | |
| TACAAGATTGGACCGGCCAA+TGG | - | chr1_1:62575735-62575754 | Msa0034530:intron | 50.0% | |
| CATGGTAAGTTGCCATTGGC+CGG | + | chr1_1:62575750-62575769 | None:intergenic | 50.0% | |
| GTATGGTGTACACCTTTGGG+AGG | - | chr1_1:62575931-62575950 | Msa0034530:intron | 50.0% | |
| ACTGAGCTATGATCAGGGGA+AGG | - | chr1_1:62576493-62576512 | Msa0034530:intron | 50.0% | |
| ATCAGGGGAAGGAGAGTCAA+CGG | - | chr1_1:62576504-62576523 | Msa0034530:intron | 50.0% | |
| GGACATGAGAGTCAATGGAC+AGG | - | chr1_1:62576525-62576544 | Msa0034530:intron | 50.0% | |
| ACTGCCAGAAACTGACCACA+GGG | + | chr1_1:62576873-62576892 | None:intergenic | 50.0% | |
| !! | TGTGGTCAGTTTCTGGCAGT+GGG | - | chr1_1:62576873-62576892 | Msa0034530:intron | 50.0% |
| GTCCCTGAAATTGCAGGAAG+TGG | - | chr1_1:62577068-62577087 | Msa0034530:CDS | 50.0% | |
| !! | CTGTTTTGAACGACCCGTCT+TGG | - | chr1_1:62577198-62577217 | Msa0034530:CDS | 50.0% |
| !! | AAGGGTCGTTCTGGAGAATC+TGG | + | chr1_1:62577357-62577376 | None:intergenic | 50.0% |
| ! | TCAGCAGGAGGCTTCTGAAA+TGG | + | chr1_1:62577420-62577439 | None:intergenic | 50.0% |
| TTGGGGTTAGGTTTCTCAGC+AGG | + | chr1_1:62577435-62577454 | None:intergenic | 50.0% | |
| ! | CCGATTCCTTGTTTGGGGTT+AGG | + | chr1_1:62577447-62577466 | None:intergenic | 50.0% |
| CGTGCAAAGCTAGTGACAGA+AGG | + | chr1_1:62578019-62578038 | None:intergenic | 50.0% | |
| !! | CTGTCACTAGCTTTGCACGA+TGG | - | chr1_1:62578020-62578039 | Msa0034530:intron | 50.0% |
| ! | TAGCTTTGCACGATGGCTCT+TGG | - | chr1_1:62578027-62578046 | Msa0034530:intron | 50.0% |
| TGCCTACAGTACTCTGGGTA+TGG | - | chr1_1:62578134-62578153 | Msa0034530:intron | 50.0% | |
| CGGGTAGGTAAGTGTAGCTA+AGG | - | chr1_1:62578511-62578530 | Msa0034530:intron | 50.0% | |
| ! | GTCTCTCCTGTTTGTTGGGT+AGG | - | chr1_1:62578584-62578603 | Msa0034530:CDS | 50.0% |
| ! | AGTCTCGGGTACGAGCCTTT+TGG | - | chr1_1:62573695-62573714 | Msa0034530:CDS | 55.0% |
| ! | TCGGGTACGAGCCTTTTGGA+TGG | - | chr1_1:62573699-62573718 | Msa0034530:CDS | 55.0% |
| GTCAGCATATCTGTGGCCGT+TGG | - | chr1_1:62574121-62574140 | Msa0034530:intron | 55.0% | |
| CTTGCATGTCCACTCTGGCT+GGG | + | chr1_1:62574836-62574855 | None:intergenic | 55.0% | |
| TCTTGCATGTCCACTCTGGC+TGG | + | chr1_1:62574837-62574856 | None:intergenic | 55.0% | |
| TCTCCCAGGTTAAGAGGGCT+AGG | + | chr1_1:62575244-62575263 | None:intergenic | 55.0% | |
| CCCTCTTAACCTGGGAGACT+TGG | - | chr1_1:62575246-62575265 | Msa0034530:CDS | 55.0% | |
| GCCGGTCCAATCTTGTAGGA+AGG | + | chr1_1:62575732-62575751 | None:intergenic | 55.0% | |
| GAGAGTCAATGGACAGGGGA+AGG | - | chr1_1:62576531-62576550 | Msa0034530:intron | 55.0% | |
| GTCAATGGACAGGGGAAGGA+AGG | - | chr1_1:62576535-62576554 | Msa0034530:intron | 55.0% | |
| GTCTCCCTGTGGTCAGTTTC+TGG | - | chr1_1:62576866-62576885 | Msa0034530:intron | 55.0% | |
| CACTGCCAGAAACTGACCAC+AGG | + | chr1_1:62576874-62576893 | None:intergenic | 55.0% | |
| !! | CTGTGGTCAGTTTCTGGCAG+TGG | - | chr1_1:62576872-62576891 | Msa0034530:intron | 55.0% |
| GATTCAGGACTCGCAGCATC+TGG | + | chr1_1:62576908-62576927 | None:intergenic | 55.0% | |
| CTGCATCCATATGCAGTCCG+TGG | - | chr1_1:62576957-62576976 | Msa0034530:CDS | 55.0% | |
| CAGCAGCATAACAAGGGCCA+CGG | + | chr1_1:62576977-62576996 | None:intergenic | 55.0% | |
| TTTGAACGACCCGTCTTGGC+AGG | - | chr1_1:62577202-62577221 | Msa0034530:CDS | 55.0% | |
| GGGTTAGGTTTCTCAGCAGG+AGG | + | chr1_1:62577432-62577451 | None:intergenic | 55.0% | |
| GCAGAAGGACCCTATCAGAG+TGG | - | chr1_1:62578192-62578211 | Msa0034530:intron | 55.0% | |
| ACCCTATCAGAGTGGCAGCT+TGG | - | chr1_1:62578200-62578219 | Msa0034530:intron | 55.0% | |
| CCCAAGCTGCCACTCTGATA+GGG | + | chr1_1:62578204-62578223 | None:intergenic | 55.0% | |
| CCCTATCAGAGTGGCAGCTT+GGG | - | chr1_1:62578201-62578220 | Msa0034530:intron | 55.0% | |
| TCCCAAGCTGCCACTCTGAT+AGG | + | chr1_1:62578205-62578224 | None:intergenic | 55.0% | |
| AGTGTGTCGTGGTCTCCCTG+TGG | - | chr1_1:62576855-62576874 | Msa0034530:intron | 60.0% | |
| ! | CAAGGGCCACGGACTGCATA+TGG | + | chr1_1:62576966-62576985 | None:intergenic | 60.0% |
| GGTCACTGACCCAGCCAGAG+TGG | - | chr1_1:62574824-62574843 | Msa0034530:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 62573249 | 62578887 | 62573249 | ID=Msa0034530;Name=Msa0034530 |
| chr1_1 | mRNA | 62573249 | 62578887 | 62573249 | ID=Msa0034530-mRNA-1;Parent=Msa0034530;Name=Msa0034530-mRNA-1;_AED=0.01;_eAED=0.01;_QI=232|1|1|1|1|1|6|440|458 |
| chr1_1 | exon | 62573249 | 62574056 | 62573249 | ID=Msa0034530-mRNA-1:exon:19751;Parent=Msa0034530-mRNA-1 |
| chr1_1 | exon | 62574671 | 62574778 | 62574671 | ID=Msa0034530-mRNA-1:exon:19750;Parent=Msa0034530-mRNA-1 |
| chr1_1 | exon | 62574980 | 62575052 | 62574980 | ID=Msa0034530-mRNA-1:exon:19749;Parent=Msa0034530-mRNA-1 |
| chr1_1 | exon | 62575132 | 62575353 | 62575132 | ID=Msa0034530-mRNA-1:exon:19748;Parent=Msa0034530-mRNA-1 |
| chr1_1 | exon | 62576930 | 62577418 | 62576930 | ID=Msa0034530-mRNA-1:exon:19747;Parent=Msa0034530-mRNA-1 |
| chr1_1 | exon | 62578539 | 62578887 | 62578539 | ID=Msa0034530-mRNA-1:exon:19746;Parent=Msa0034530-mRNA-1 |
| chr1_1 | five_prime_UTR | 62578656 | 62578887 | 62578656 | ID=Msa0034530-mRNA-1:five_prime_utr;Parent=Msa0034530-mRNA-1 |
| chr1_1 | CDS | 62578539 | 62578655 | 62578539 | ID=Msa0034530-mRNA-1:cds;Parent=Msa0034530-mRNA-1 |
| chr1_1 | CDS | 62576930 | 62577418 | 62576930 | ID=Msa0034530-mRNA-1:cds;Parent=Msa0034530-mRNA-1 |
| chr1_1 | CDS | 62575132 | 62575353 | 62575132 | ID=Msa0034530-mRNA-1:cds;Parent=Msa0034530-mRNA-1 |
| chr1_1 | CDS | 62574980 | 62575052 | 62574980 | ID=Msa0034530-mRNA-1:cds;Parent=Msa0034530-mRNA-1 |
| chr1_1 | CDS | 62574671 | 62574778 | 62574671 | ID=Msa0034530-mRNA-1:cds;Parent=Msa0034530-mRNA-1 |
| chr1_1 | CDS | 62573689 | 62574056 | 62573689 | ID=Msa0034530-mRNA-1:cds;Parent=Msa0034530-mRNA-1 |
| chr1_1 | three_prime_UTR | 62573249 | 62573688 | 62573249 | ID=Msa0034530-mRNA-1:three_prime_utr;Parent=Msa0034530-mRNA-1 |
| Gene Sequence |
| Protein sequence |
