Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0136500 | XP_013470044.1 | 98.039 | 408 | 5 | 2 | 1 | 408 | 1 | 405 | 0.0 | 822 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0136500 | sp|Q71DJ5|LIP1_ARATH | 63.102 | 374 | 126 | 1 | 34 | 407 | 31 | 392 | 1.43e-180 | 511 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0136500 | A0A072VQK3 | 98.039 | 408 | 5 | 2 | 1 | 408 | 1 | 405 | 0.0 | 822 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0089390 | Msa0136500 | 0.869952 | 2.104571e-66 | -8.615850e-47 |
| Msa0123900 | Msa0136500 | 0.810387 | 1.182349e-50 | -8.615850e-47 |
| Msa0130120 | Msa0136500 | 0.802415 | 5.671279e-49 | -8.615850e-47 |
| Msa0136500 | Msa0489620 | 0.805685 | 1.184836e-49 | -8.615850e-47 |
| Msa0136500 | Msa0641400 | 0.814488 | 1.501997e-51 | -8.615850e-47 |
| Msa0136500 | Msa0651490 | 0.817197 | 3.735489e-52 | -8.615850e-47 |
| Msa0136500 | Msa0930160 | 0.810556 | 1.086816e-50 | -8.615850e-47 |
| Msa0136500 | Msa1183850 | 0.800581 | 1.347439e-48 | -8.615850e-47 |
| Msa0136500 | Msa1341170 | 0.802608 | 5.175576e-49 | -8.615850e-47 |
| Msa0136500 | Msa1397520 | 0.999411 | 1.699571e-309 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0136500 | MtrunA17_Chr1g0207891 | 98.039 | 408 | 5 | 2 | 1 | 408 | 1 | 405 | 0.0 | 822 |
| Msa0136500 | MtrunA17_Chr5g0438751 | 39.947 | 378 | 208 | 5 | 29 | 400 | 36 | 400 | 8.18e-105 | 315 |
| Msa0136500 | MtrunA17_Chr7g0250081 | 40.584 | 377 | 199 | 6 | 35 | 401 | 43 | 404 | 1.65e-101 | 307 |
| Msa0136500 | MtrunA17_Chr7g0225611 | 39.211 | 380 | 217 | 4 | 29 | 402 | 41 | 412 | 1.17e-100 | 305 |
| Msa0136500 | MtrunA17_Chr6g0462811 | 39.516 | 372 | 169 | 6 | 35 | 401 | 44 | 364 | 6.11e-89 | 273 |
| Msa0136500 | MtrunA17_Chr3g0120021 | 36.473 | 414 | 205 | 7 | 35 | 401 | 43 | 445 | 2.61e-86 | 269 |
| Msa0136500 | MtrunA17_Chr7g0250091 | 40.984 | 305 | 157 | 4 | 102 | 400 | 64 | 351 | 3.30e-78 | 245 |
| Msa0136500 | MtrunA17_Chr6g0462831 | 41.132 | 265 | 144 | 6 | 145 | 401 | 3 | 263 | 6.88e-59 | 192 |
| Msa0136500 | MtrunA17_Chr3g0120041 | 44.324 | 185 | 92 | 1 | 35 | 219 | 47 | 220 | 6.38e-51 | 172 |
| Msa0136500 | MtrunA17_Chr3g0119931 | 42.458 | 179 | 92 | 2 | 35 | 213 | 43 | 210 | 4.56e-48 | 164 |
| Msa0136500 | MtrunA17_Chr6g0459361 | 36.634 | 202 | 120 | 3 | 19 | 219 | 30 | 224 | 1.88e-44 | 154 |
| Msa0136500 | MtrunA17_Chr6g0459381 | 36.444 | 225 | 130 | 4 | 1 | 219 | 7 | 224 | 2.65e-44 | 154 |
| Msa0136500 | MtrunA17_Chr6g0459401 | 38.172 | 186 | 107 | 2 | 35 | 219 | 46 | 224 | 4.58e-44 | 154 |
| Msa0136500 | MtrunA17_Chr6g0459421 | 38.172 | 186 | 107 | 2 | 35 | 219 | 46 | 224 | 6.91e-44 | 153 |
| Msa0136500 | MtrunA17_Chr3g0120031 | 43.636 | 165 | 85 | 4 | 245 | 401 | 8 | 172 | 2.95e-39 | 138 |
| Msa0136500 | MtrunA17_Chr3g0119941 | 47.101 | 138 | 68 | 3 | 269 | 401 | 30 | 167 | 1.10e-36 | 131 |
| Msa0136500 | MtrunA17_Chr6g0459391 | 36.486 | 148 | 88 | 2 | 259 | 400 | 25 | 172 | 3.00e-31 | 117 |
| Msa0136500 | MtrunA17_Chr5g0394731 | 36.364 | 132 | 79 | 1 | 112 | 243 | 20 | 146 | 2.37e-28 | 108 |
| Msa0136500 | MtrunA17_Chr6g0459411 | 34.559 | 136 | 83 | 2 | 271 | 400 | 5 | 140 | 6.19e-24 | 96.7 |
| Msa0136500 | MtrunA17_Chr6g0459431 | 33.824 | 136 | 84 | 2 | 271 | 400 | 5 | 140 | 1.17e-22 | 93.2 |
| Msa0136500 | MtrunA17_Chr6g0459371 | 34.483 | 87 | 52 | 1 | 319 | 400 | 1 | 87 | 6.27e-16 | 72.8 |
| Msa0136500 | MtrunA17_Chr5g0421521 | 90.625 | 32 | 3 | 0 | 270 | 301 | 900 | 931 | 1.01e-12 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0136500 | AT2G15230.1 | 63.102 | 374 | 126 | 1 | 34 | 407 | 31 | 392 | 0.0 | 511 |
| Msa0136500 | AT5G14180.1 | 36.973 | 403 | 233 | 7 | 6 | 400 | 26 | 415 | 1.17e-95 | 293 |
| Msa0136500 | AT5G14180.4 | 40.065 | 307 | 178 | 3 | 100 | 400 | 9 | 315 | 2.31e-82 | 255 |
| Msa0136500 | AT5G14180.2 | 40.000 | 305 | 177 | 3 | 102 | 400 | 2 | 306 | 4.56e-82 | 254 |
| Msa0136500 | AT5G14180.3 | 37.124 | 299 | 172 | 5 | 6 | 301 | 26 | 311 | 2.79e-68 | 219 |
| Msa0136500 | AT5G14180.5 | 35.688 | 269 | 157 | 5 | 6 | 271 | 26 | 281 | 4.18e-55 | 184 |
Find 132 sgRNAs with CRISPR-Local
Find 361 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGGATTGGTGAAACAGAATT+TGG | 0.182173 | 1_3:+68379188 | Msa0136500:five_prime_UTR |
| CAGAGAGTTGGTTGTTGTTT+GGG | 0.186644 | 1_3:-68379298 | None:intergenic |
| TTGCCTTTGTTGATGGCTTA+TGG | 0.191042 | 1_3:+68384428 | Msa0136500:CDS |
| TTATATTACATTCATCTTAA+TGG | 0.199327 | 1_3:-68384654 | None:intergenic |
| CAGATCATTGCCTTTGTTGA+TGG | 0.268391 | 1_3:+68384421 | Msa0136500:CDS |
| ACCTTCTCCAAGTACGATTA+TGG | 0.280197 | 1_3:+68384332 | Msa0136500:CDS |
| ACAAAGGATGGTTTCTTGTT+AGG | 0.282718 | 1_3:+68379482 | Msa0136500:CDS |
| GCTTCTCCATGGCCTATTCA+TGG | 0.284435 | 1_3:+68379595 | Msa0136500:CDS |
| ACAGAGAGTTGGTTGTTGTT+TGG | 0.284882 | 1_3:-68379299 | None:intergenic |
| TGCCTTTGTTGATGGCTTAT+GGG | 0.286118 | 1_3:+68384429 | Msa0136500:CDS |
| ATATGATCCAAGTATGAAAT+TGG | 0.303318 | 1_3:-68381831 | None:intergenic |
| TTCACCAATCCTATTATTGA+TGG | 0.307707 | 1_3:-68379177 | None:intergenic |
| CCTCTTATCATTCAATGGTT+TGG | 0.307944 | 1_3:-68384832 | None:intergenic |
| CCATCATCACCATCAATAAT+AGG | 0.311385 | 1_3:+68379168 | Msa0136500:five_prime_UTR |
| ATGCGGCTAAGGTCAAATTT+TGG | 0.319645 | 1_3:-68384395 | None:intergenic |
| CCAAACCATTGAATGATAAG+AGG | 0.331508 | 1_3:+68384832 | Msa0136500:three_prime_UTR |
| TTGGTTTGCTACTAATTGAT+TGG | 0.341793 | 1_3:+68384775 | Msa0136500:three_prime_UTR |
| TCTGTCTCCAATTTCATACT+TGG | 0.350785 | 1_3:+68381824 | Msa0136500:CDS |
| GGATTGGTGAAACAGAATTT+GGG | 0.356943 | 1_3:+68379189 | Msa0136500:five_prime_UTR |
| TTGAAGTTAAAACCATTGTT+TGG | 0.360541 | 1_3:+68384798 | Msa0136500:three_prime_UTR |
| ATCAGTTTCTTCAAGTCAAT+GGG | 0.364667 | 1_3:+68384599 | Msa0136500:CDS |
| CATCAGTTTCTTCAAGTCAA+TGG | 0.364835 | 1_3:+68384598 | Msa0136500:CDS |
| AACTCAAAGTTATTTGTAGT+TGG | 0.368834 | 1_3:+68381636 | Msa0136500:CDS |
| GGATCATATTAGTGCACCTT+TGG | 0.375065 | 1_3:+68381845 | Msa0136500:CDS |
| TGCACCTTTGGTACTAAGAA+TGG | 0.380394 | 1_3:+68381857 | Msa0136500:CDS |
| CACAGAAGTATTTACTGTCT+TGG | 0.380650 | 1_3:+68384756 | Msa0136500:three_prime_UTR |
| GCAAAGAAAATAGTATATAA+AGG | 0.402286 | 1_3:-68384931 | None:intergenic |
| TCACTCCAACGCGCCTCAAT+TGG | 0.403574 | 1_3:-68379088 | None:intergenic |
| ACTCAAAGTTATTTGTAGTT+GGG | 0.404963 | 1_3:+68381637 | Msa0136500:CDS |
| TGTAATTTAATTTATACTCT+CGG | 0.415583 | 1_3:-68379128 | None:intergenic |
| ATCTTTATCAGAGAAGAATA+AGG | 0.417364 | 1_3:+68380473 | Msa0136500:CDS |
| ACATAAGGAAATCAAGAGAT+TGG | 0.417842 | 1_3:-68382147 | None:intergenic |
| GACATGCTGTCATCCATTAC+AGG | 0.418206 | 1_3:+68382191 | Msa0136500:CDS |
| GTGGTTTATCTTGAAAACTA+TGG | 0.418535 | 1_3:+68384521 | Msa0136500:CDS |
| AAATACACCAGAACAATCAT+TGG | 0.421081 | 1_3:+68380374 | Msa0136500:CDS |
| AAGCTTTCCATAATCGTACT+TGG | 0.430219 | 1_3:-68384339 | None:intergenic |
| AGTAAGTAGCAACCATGAAT+AGG | 0.437845 | 1_3:-68379607 | None:intergenic |
| GGCTTCATCCTCGCGGATCA+AGG | 0.441928 | 1_3:+68380396 | Msa0136500:CDS |
| GTAATTTAATTTATACTCTC+GGG | 0.445940 | 1_3:-68379127 | None:intergenic |
| GGAAAAGATGCACATTGATC+AGG | 0.447013 | 1_3:+68381878 | Msa0136500:CDS |
| GGGTGCGCTGCCGCCGTCGA+AGG | 0.448632 | 1_3:-68379275 | None:intergenic |
| CATCAACAAAGGCAATGATC+TGG | 0.449214 | 1_3:-68384420 | None:intergenic |
| TTCATCAGCTGAATTTCAAA+AGG | 0.450695 | 1_3:+68382004 | Msa0136500:CDS |
| AGTGATATATACTCACAGTA+TGG | 0.454131 | 1_3:-68384959 | None:intergenic |
| GTTTCCGAAGGATAAGAGTA+TGG | 0.460626 | 1_3:-68379242 | None:intergenic |
| ATGAAGCCCAATGATTGTTC+TGG | 0.466690 | 1_3:-68380381 | None:intergenic |
| GACTTGAAGAAACTGATGAT+AGG | 0.472607 | 1_3:-68384593 | None:intergenic |
| AGAGAGTTGGTTGTTGTTTG+GGG | 0.478775 | 1_3:-68379297 | None:intergenic |
| AGGCCATGGAGAAGCAGAAC+CGG | 0.486022 | 1_3:-68379587 | None:intergenic |
| ACCACCCTGTACTAACTGTT+AGG | 0.489126 | 1_3:-68379047 | None:intergenic |
| GCCTTTGTTGATGGCTTATG+GGG | 0.492263 | 1_3:+68384430 | Msa0136500:CDS |
| ATGATCTGGGTATGCGGCTA+AGG | 0.493826 | 1_3:-68384406 | None:intergenic |
| ATTGAGGCGCGTTGGAGTGA+TGG | 0.499879 | 1_3:+68379091 | Msa0136500:five_prime_UTR |
| TCATTTCCGCAAGATCGTAC+AGG | 0.501400 | 1_3:-68381590 | None:intergenic |
| ATTTGTAGTTGGGCATTCAC+AGG | 0.502438 | 1_3:+68381647 | Msa0136500:CDS |
| ATCACCATCAATAATAGGAT+TGG | 0.503513 | 1_3:+68379173 | Msa0136500:five_prime_UTR |
| CATGGAACATACTCTGGAAA+AGG | 0.507066 | 1_3:-68383260 | None:intergenic |
| ATTGCCATACTCTTATCCTT+CGG | 0.509142 | 1_3:+68379238 | Msa0136500:CDS |
| CCTCCGGTTCTGCTTCTCCA+TGG | 0.509579 | 1_3:+68379584 | Msa0136500:CDS |
| AACCACCTAACAGTTAGTAC+AGG | 0.512063 | 1_3:+68379042 | Msa0136500:five_prime_UTR |
| ATTTATACTCTCGGGTTCGA+TGG | 0.514197 | 1_3:-68379119 | None:intergenic |
| ATATACTCACAGTATGGTAA+TGG | 0.514581 | 1_3:-68384953 | None:intergenic |
| TTACTTTCAGATTGAAACAA+AGG | 0.517112 | 1_3:+68379466 | Msa0136500:intron |
| TCAACCGGATATAGTAGAAA+AGG | 0.520659 | 1_3:+68381785 | Msa0136500:CDS |
| TGTTCAGATGATTGCTACAA+TGG | 0.521008 | 1_3:+68381978 | Msa0136500:intron |
| TACAGAACACGCGCCAATTG+AGG | 0.522614 | 1_3:+68379075 | Msa0136500:five_prime_UTR |
| CCTATTATTGATGGTGATGA+TGG | 0.523869 | 1_3:-68379168 | None:intergenic |
| GTTCAGATGATTGCTACAAT+GGG | 0.525033 | 1_3:+68381979 | Msa0136500:intron |
| CTCTCAGTGAAGATGTAGAA+AGG | 0.527326 | 1_3:+68384869 | Msa0136500:three_prime_UTR |
| CAGTGAAGATGTAGAAAGGA+TGG | 0.528452 | 1_3:+68384873 | Msa0136500:three_prime_UTR |
| CTGATAAAGATTTATGTCCA+TGG | 0.529374 | 1_3:-68380461 | None:intergenic |
| TGAGAGACATGAACCTGTAA+TGG | 0.530576 | 1_3:-68382204 | None:intergenic |
| ACAACAACAACGAGGTCCTC+CGG | 0.531545 | 1_3:+68379568 | Msa0136500:CDS |
| TACTATATCCGGTTGAGTGA+AGG | 0.532690 | 1_3:-68381778 | None:intergenic |
| ATCAACAAAGGCAATGATCT+GGG | 0.532780 | 1_3:-68384419 | None:intergenic |
| AGAGTTGGTTGTTGTTTGGG+GGG | 0.532934 | 1_3:-68379295 | None:intergenic |
| ACTTGAAGAAACTGATGATA+GGG | 0.535072 | 1_3:-68384592 | None:intergenic |
| GCAGTTCCTTGAGTGTGTGC+TGG | 0.538191 | 1_3:-68384484 | None:intergenic |
| TCCATAATCGTACTTGGAGA+AGG | 0.540057 | 1_3:-68384333 | None:intergenic |
| AATACACCAGAACAATCATT+GGG | 0.543527 | 1_3:+68380375 | Msa0136500:CDS |
| TTACCCTTGCTCTGAATATG+TGG | 0.550867 | 1_3:+68379345 | Msa0136500:CDS |
| ATGAGTTCATCACAGAGAGT+TGG | 0.551768 | 1_3:-68379310 | None:intergenic |
| GAGAGTTGGTTGTTGTTTGG+GGG | 0.553474 | 1_3:-68379296 | None:intergenic |
| TTTCAGATTGAAACAAAGGA+TGG | 0.556157 | 1_3:+68379470 | Msa0136500:intron |
| ATTACATTCATCTTAATGGA+AGG | 0.556575 | 1_3:-68384650 | None:intergenic |
| CAAACCATTGAATGATAAGA+GGG | 0.556879 | 1_3:+68384833 | Msa0136500:three_prime_UTR |
| ACTTAGACGAGTATCACATA+AGG | 0.561077 | 1_3:-68382162 | None:intergenic |
| GGAGTGCACCACTGATATGA+AGG | 0.565592 | 1_3:+68384894 | Msa0136500:three_prime_UTR |
| CAAGACAGTAAATACTTCTG+TGG | 0.566209 | 1_3:-68384755 | None:intergenic |
| ACGCGCCAATTGAGGCGCGT+TGG | 0.567288 | 1_3:+68379083 | Msa0136500:five_prime_UTR |
| TAGATTCATTAAACATACAG+TGG | 0.569806 | 1_3:+68384684 | Msa0136500:three_prime_UTR |
| TAAACCACCTCAGGTGTGGA+TGG | 0.574032 | 1_3:-68384506 | None:intergenic |
| CGTGGAACACGTTGGAGCCA+TGG | 0.574865 | 1_3:+68380444 | Msa0136500:CDS |
| CATTTCCGCAAGATCGTACA+GGG | 0.575973 | 1_3:-68381589 | None:intergenic |
| GATGAACTCATTCTTCCCGC+TGG | 0.577409 | 1_3:+68379322 | Msa0136500:CDS |
| AGTAATAACCTTCATATCAG+TGG | 0.583808 | 1_3:-68384902 | None:intergenic |
| ACTTGGAGAAGGTACCTTTG+CGG | 0.586271 | 1_3:-68384322 | None:intergenic |
| AATACCACATATTCAGAGCA+AGG | 0.587448 | 1_3:-68379349 | None:intergenic |
| AAGATAAACCACCTCAGGTG+TGG | 0.587694 | 1_3:-68384510 | None:intergenic |
| TAGCAACCATGAATAGGCCA+TGG | 0.587715 | 1_3:-68379601 | None:intergenic |
| TCAGAGCAAGGGTAACCAGC+GGG | 0.589366 | 1_3:-68379337 | None:intergenic |
| ATTAGCCCTGTACGATCTTG+CGG | 0.594612 | 1_3:+68381584 | Msa0136500:CDS |
| GTATATATCACTAATTATTG+AGG | 0.599896 | 1_3:+68384970 | Msa0136500:three_prime_UTR |
| TTGCTTCAACGAGTCACGCG+TGG | 0.604439 | 1_3:+68383185 | Msa0136500:CDS |
| GATTGGTGAAACAGAATTTG+GGG | 0.607741 | 1_3:+68379190 | Msa0136500:five_prime_UTR |
| ACAATCAGGCAGGTGATGCA+TGG | 0.608662 | 1_3:+68380346 | Msa0136500:intron |
| AAGACAGTAAATACTTCTGT+GGG | 0.608764 | 1_3:-68384754 | None:intergenic |
| AACATCGCTCACTCCTTCGA+CGG | 0.610140 | 1_3:+68379262 | Msa0136500:CDS |
| ATCGCTCACTCCTTCGACGG+CGG | 0.610445 | 1_3:+68379265 | Msa0136500:CDS |
| TGATTTCCAGCACACACTCA+AGG | 0.617911 | 1_3:+68384478 | Msa0136500:CDS |
| GGAACATACTCTGGAAAAGG+TGG | 0.634034 | 1_3:-68383257 | None:intergenic |
| ACTGCCATCCACACCTGAGG+TGG | 0.635259 | 1_3:+68384502 | Msa0136500:CDS |
| AAGGCAATGATCTGGGTATG+CGG | 0.641163 | 1_3:-68384412 | None:intergenic |
| ATCATTGGGCTTCATCCTCG+CGG | 0.642517 | 1_3:+68380389 | Msa0136500:CDS |
| ACCCTGTACTAACTGTTAGG+TGG | 0.645671 | 1_3:-68379044 | None:intergenic |
| TTACAGACACAACATCAAAG+TGG | 0.645873 | 1_3:-68384714 | None:intergenic |
| AGACACAACATCAAAGTGGA+CGG | 0.649083 | 1_3:-68384710 | None:intergenic |
| TGTTCTCCAGTGATCCGCAA+AGG | 0.657082 | 1_3:+68384308 | Msa0136500:intron |
| ATACCACATATTCAGAGCAA+GGG | 0.659010 | 1_3:-68379348 | None:intergenic |
| CCTTTGTTGATGGCTTATGG+GGG | 0.663104 | 1_3:+68384431 | Msa0136500:CDS |
| GGAGTGAGCGATGTTTCCGA+AGG | 0.667016 | 1_3:-68379254 | None:intergenic |
| GGAACTGCCATCCACACCTG+AGG | 0.674091 | 1_3:+68384499 | Msa0136500:CDS |
| ATTATTGATGGTGATGATGG+TGG | 0.675186 | 1_3:-68379165 | None:intergenic |
| TTCAGAGCAAGGGTAACCAG+CGG | 0.686767 | 1_3:-68379338 | None:intergenic |
| ATTGGTGAAACAGAATTTGG+GGG | 0.689686 | 1_3:+68379191 | Msa0136500:five_prime_UTR |
| CCATGGAGAAGCAGAACCGG+AGG | 0.690082 | 1_3:-68379584 | None:intergenic |
| ACCACCTAACAGTTAGTACA+GGG | 0.691692 | 1_3:+68379043 | Msa0136500:five_prime_UTR |
| TCAGTTTCTTCAAGTCAATG+GGG | 0.699933 | 1_3:+68384600 | Msa0136500:CDS |
| CATCAAAACCTTGATCCGCG+AGG | 0.738834 | 1_3:-68380404 | None:intergenic |
| ACCTAACAGTTAGTACAGGG+TGG | 0.739258 | 1_3:+68379046 | Msa0136500:five_prime_UTR |
| GAAATGTGCGTGGAACACGT+TGG | 0.739556 | 1_3:+68380436 | Msa0136500:CDS |
| GTTTGGGTAGGAAATGTGCG+TGG | 0.748523 | 1_3:+68380426 | Msa0136500:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTTTTTACATCAATAAT+GGG | - | chr1_3:68382510-68382529 | None:intergenic | 10.0% |
| !!! | TATATTTTTTACATCAATAA+TGG | - | chr1_3:68382511-68382530 | None:intergenic | 10.0% |
| !! | ATTATTGATGTAAAAAATAT+AGG | + | chr1_3:68382510-68382529 | Msa0136500:intron | 10.0% |
| !!! | AGAAAAAAACAATTTTATTT+AGG | + | chr1_3:68382897-68382916 | Msa0136500:intron | 10.0% |
| !!! | TGTAATTTAATTTATACTCT+CGG | - | chr1_3:68379131-68379150 | None:intergenic | 15.0% |
| !! | AATGAAAAGTTATTTATGTT+TGG | - | chr1_3:68380056-68380075 | None:intergenic | 15.0% |
| !!! | AATTAGTTTCAAACTTTAAA+AGG | - | chr1_3:68380280-68380299 | None:intergenic | 15.0% |
| !!! | TTCTTTTCAATTGTAAAATA+TGG | + | chr1_3:68380570-68380589 | Msa0136500:intron | 15.0% |
| !!! | TCTTTTCAATTGTAAAATAT+GGG | + | chr1_3:68380571-68380590 | Msa0136500:intron | 15.0% |
| !!! | TTTTATTTTGGTAAAAATGA+GGG | - | chr1_3:68381499-68381518 | None:intergenic | 15.0% |
| !! | ATAAATTAATATATGTGTAG+CGG | - | chr1_3:68382545-68382564 | None:intergenic | 15.0% |
| !! | ATGACATTAAATTAAATTAC+AGG | + | chr1_3:68383153-68383172 | Msa0136500:intron | 15.0% |
| !! | TCTATTTATAAATTGCTAAA+AGG | + | chr1_3:68384147-68384166 | Msa0136500:intron | 15.0% |
| !! | TTATATTACATTCATCTTAA+TGG | - | chr1_3:68384657-68384676 | None:intergenic | 15.0% |
| !!! | GTAATTTAATTTATACTCTC+GGG | - | chr1_3:68379130-68379149 | None:intergenic | 20.0% |
| !! | AAGATATGAATTAGAAAGAA+GGG | - | chr1_3:68379407-68379426 | None:intergenic | 20.0% |
| !! | AAAGATATGAATTAGAAAGA+AGG | - | chr1_3:68379408-68379427 | None:intergenic | 20.0% |
| !! | CATAGTGTATTAGTATAATA+AGG | + | chr1_3:68379780-68379799 | Msa0136500:intron | 20.0% |
| !!! | TCAATTTAGAATCATTTATG+AGG | - | chr1_3:68379955-68379974 | None:intergenic | 20.0% |
| !! | TTAAAAATTCACTTTGTATG+CGG | + | chr1_3:68380180-68380199 | Msa0136500:intron | 20.0% |
| !!! | ACTATATTCTGTCATTTTTT+AGG | + | chr1_3:68380211-68380230 | Msa0136500:intron | 20.0% |
| !!! | CTATATTCTGTCATTTTTTA+GGG | + | chr1_3:68380212-68380231 | Msa0136500:intron | 20.0% |
| !!! | TATATTCTGTCATTTTTTAG+GGG | + | chr1_3:68380213-68380232 | Msa0136500:intron | 20.0% |
| !!! | AAATTCATTTTGCAATTTTG+TGG | - | chr1_3:68380647-68380666 | None:intergenic | 20.0% |
| !!! | TAATATTTGTACAACCATTT+TGG | + | chr1_3:68380750-68380769 | Msa0136500:intron | 20.0% |
| !!! | AATATTTGTACAACCATTTT+GGG | + | chr1_3:68380751-68380770 | Msa0136500:intron | 20.0% |
| !!! | TACAAGTTCTAAATGTATTA+AGG | + | chr1_3:68380962-68380981 | Msa0136500:intron | 20.0% |
| !!! | ACAAGTTCTAAATGTATTAA+GGG | + | chr1_3:68380963-68380982 | Msa0136500:intron | 20.0% |
| !!! | TATATTTTTGAGTTTTGACA+CGG | + | chr1_3:68381049-68381068 | Msa0136500:intron | 20.0% |
| !!! | TTTTTAGCTGTATATTGATA+AGG | + | chr1_3:68381351-68381370 | Msa0136500:intron | 20.0% |
| !!! | TTTATTTTGGTAAAAATGAG+GGG | - | chr1_3:68381498-68381517 | None:intergenic | 20.0% |
| !!! | GTTTTATTTTGGTAAAAATG+AGG | - | chr1_3:68381500-68381519 | None:intergenic | 20.0% |
| !!! | ATTATGAGAAGAGTATTATT+TGG | - | chr1_3:68382340-68382359 | None:intergenic | 20.0% |
| !! | GATAGTAGAAGAATAAATAA+AGG | - | chr1_3:68382672-68382691 | None:intergenic | 20.0% |
| !!! | TGAGAAATTTTGATCAATTA+GGG | - | chr1_3:68382738-68382757 | None:intergenic | 20.0% |
| !!! | TTGAGAAATTTTGATCAATT+AGG | - | chr1_3:68382739-68382758 | None:intergenic | 20.0% |
| !!! | CTCATTTTAATCTATAACTT+AGG | + | chr1_3:68383048-68383067 | Msa0136500:intron | 20.0% |
| !! | ATTTAAAAGATATGCATTGT+CGG | - | chr1_3:68383792-68383811 | None:intergenic | 20.0% |
| !! | GCAAAGAAAATAGTATATAA+AGG | - | chr1_3:68384934-68384953 | None:intergenic | 20.0% |
| !! | GTATATATCACTAATTATTG+AGG | + | chr1_3:68384970-68384989 | Msa0136500:three_prime_UTR | 20.0% |
| ! | ATTAGAAAGAAGGGAAATAT+TGG | - | chr1_3:68379398-68379417 | None:intergenic | 25.0% |
| !!! | TTTCTGTTTTTCTTGCTAAT+TGG | + | chr1_3:68379425-68379444 | Msa0136500:intron | 25.0% |
| ! | TTACTTTCAGATTGAAACAA+AGG | + | chr1_3:68379466-68379485 | Msa0136500:intron | 25.0% |
| ! | GGGTTTAACAATAAATTCAA+TGG | - | chr1_3:68380016-68380035 | None:intergenic | 25.0% |
| ! | TGGATATATTCATGTAAACA+GGG | - | chr1_3:68380036-68380055 | None:intergenic | 25.0% |
| ! | TTGGATATATTCATGTAAAC+AGG | - | chr1_3:68380037-68380056 | None:intergenic | 25.0% |
| ! | ATCTTTATCAGAGAAGAATA+AGG | + | chr1_3:68380473-68380492 | Msa0136500:CDS | 25.0% |
| !!! | ACCTTTTTTTCTCTTCTTTT+GGG | - | chr1_3:68380887-68380906 | None:intergenic | 25.0% |
| !!! | AACCTTTTTTTCTCTTCTTT+TGG | - | chr1_3:68380888-68380907 | None:intergenic | 25.0% |
| ! | CAAATAAGAAATGCTTCATT+CGG | + | chr1_3:68381281-68381300 | Msa0136500:intron | 25.0% |
| !!! | CATACTCATCAGTTTTATTT+TGG | - | chr1_3:68381511-68381530 | None:intergenic | 25.0% |
| ! | AACTCAAAGTTATTTGTAGT+TGG | + | chr1_3:68381636-68381655 | Msa0136500:CDS | 25.0% |
| ! | ACTCAAAGTTATTTGTAGTT+GGG | + | chr1_3:68381637-68381656 | Msa0136500:CDS | 25.0% |
| !!! | TGTTTCTAAAATGTAAGCTA+TGG | - | chr1_3:68381721-68381740 | None:intergenic | 25.0% |
| ! | ATATGATCCAAGTATGAAAT+TGG | - | chr1_3:68381834-68381853 | None:intergenic | 25.0% |
| ! | ATCAACATATGCAAAAGAAA+AGG | - | chr1_3:68382059-68382078 | None:intergenic | 25.0% |
| ! | TAAATAAAGGTCAGATACTA+TGG | - | chr1_3:68382659-68382678 | None:intergenic | 25.0% |
| !!! | AGAAATTTTGATCAATTAGG+GGG | - | chr1_3:68382736-68382755 | None:intergenic | 25.0% |
| !!! | GAGAAATTTTGATCAATTAG+GGG | - | chr1_3:68382737-68382756 | None:intergenic | 25.0% |
| ! | ATATGTAACTCTTGTATCTA+CGG | + | chr1_3:68382762-68382781 | Msa0136500:intron | 25.0% |
| !!! | AAACATTTTTTTCTCTCTCT+TGG | - | chr1_3:68382797-68382816 | None:intergenic | 25.0% |
| !!! | AACAATTTTATTTAGGACAC+TGG | + | chr1_3:68382904-68382923 | Msa0136500:intron | 25.0% |
| ! | GTTATAGATTAAAATGAGAG+AGG | - | chr1_3:68383046-68383065 | None:intergenic | 25.0% |
| ! | AAGAAACCAATTAAAGATGA+TGG | - | chr1_3:68383288-68383307 | None:intergenic | 25.0% |
| ! | ACATTATCAAACATGATCAA+AGG | - | chr1_3:68383451-68383470 | None:intergenic | 25.0% |
| ! | ACGATATAGAATAAACAAAC+TGG | - | chr1_3:68383611-68383630 | None:intergenic | 25.0% |
| ! | TGTAAAACTAATTACTAAGG+TGG | - | chr1_3:68383645-68383664 | None:intergenic | 25.0% |
| ! | CAGTGTAAAACTAATTACTA+AGG | - | chr1_3:68383648-68383667 | None:intergenic | 25.0% |
| ! | TCAAGATGCAGTTATTAAAA+TGG | + | chr1_3:68383713-68383732 | Msa0136500:intron | 25.0% |
| ! | CAAGATGCAGTTATTAAAAT+GGG | + | chr1_3:68383714-68383733 | Msa0136500:intron | 25.0% |
| ! | AAGATGCAGTTATTAAAATG+GGG | + | chr1_3:68383715-68383734 | Msa0136500:intron | 25.0% |
| ! | ATCCTTACAAATATGTCTTT+AGG | + | chr1_3:68383810-68383829 | Msa0136500:intron | 25.0% |
| ! | TTTCCTATAATGTCATTACT+AGG | + | chr1_3:68383854-68383873 | Msa0136500:intron | 25.0% |
| !!! | TTTTACTGTGTTATTTGCTT+TGG | + | chr1_3:68384193-68384212 | Msa0136500:intron | 25.0% |
| ! | CTTAAAAATCTGATAGAGTA+TGG | + | chr1_3:68384359-68384378 | Msa0136500:CDS | 25.0% |
| ! | ATTACATTCATCTTAATGGA+AGG | - | chr1_3:68384653-68384672 | None:intergenic | 25.0% |
| ! | TAGATTCATTAAACATACAG+TGG | + | chr1_3:68384684-68384703 | Msa0136500:three_prime_UTR | 25.0% |
| ! | TTGAAGTTAAAACCATTGTT+TGG | + | chr1_3:68384798-68384817 | Msa0136500:three_prime_UTR | 25.0% |
| !!! | GAATCTATTTTTCCAAACAA+TGG | - | chr1_3:68384813-68384832 | None:intergenic | 25.0% |
| ATCACCATCAATAATAGGAT+TGG | + | chr1_3:68379173-68379192 | Msa0136500:five_prime_UTR | 30.0% | |
| TTCACCAATCCTATTATTGA+TGG | - | chr1_3:68379180-68379199 | None:intergenic | 30.0% | |
| TTTCAGATTGAAACAAAGGA+TGG | + | chr1_3:68379470-68379489 | Msa0136500:intron | 30.0% | |
| ! | ATATCTTGCTACTTCAATGT+GGG | + | chr1_3:68379808-68379827 | Msa0136500:intron | 30.0% |
| TAGAACCAAACATACACTAA+AGG | - | chr1_3:68379860-68379879 | None:intergenic | 30.0% | |
| !!! | TGTATGTTTGGTTCTACTTT+TGG | + | chr1_3:68379864-68379883 | Msa0136500:intron | 30.0% |
| !! | GAATTTGTTATTGACCTGTT+TGG | + | chr1_3:68379915-68379934 | Msa0136500:intron | 30.0% |
| CAAAACTCTGCAAATATTAC+TGG | - | chr1_3:68380141-68380160 | None:intergenic | 30.0% | |
| ! | CAGTAATATTTGCAGAGTTT+TGG | + | chr1_3:68380139-68380158 | Msa0136500:intron | 30.0% |
| ! | TTATGCCATTTGATACAATC+AGG | + | chr1_3:68380332-68380351 | Msa0136500:intron | 30.0% |
| AAATACACCAGAACAATCAT+TGG | + | chr1_3:68380374-68380393 | Msa0136500:CDS | 30.0% | |
| AATACACCAGAACAATCATT+GGG | + | chr1_3:68380375-68380394 | Msa0136500:CDS | 30.0% | |
| CTGATAAAGATTTATGTCCA+TGG | - | chr1_3:68380464-68380483 | None:intergenic | 30.0% | |
| CAATGAGTTCTATAACATGA+AGG | - | chr1_3:68380516-68380535 | None:intergenic | 30.0% | |
| ! | TACTTTTCTATACATAGCCA+AGG | + | chr1_3:68380616-68380635 | Msa0136500:intron | 30.0% |
| ! | ACTTTTCTATACATAGCCAA+GGG | + | chr1_3:68380617-68380636 | Msa0136500:intron | 30.0% |
| TCAACAACTAAACTTTCATG+TGG | + | chr1_3:68380700-68380719 | Msa0136500:intron | 30.0% | |
| AAACAATAGAGAGAGAAAGA+GGG | - | chr1_3:68380860-68380879 | None:intergenic | 30.0% | |
| AAAACAATAGAGAGAGAAAG+AGG | - | chr1_3:68380861-68380880 | None:intergenic | 30.0% | |
| TCCCAAAAGAAGAGAAAAAA+AGG | + | chr1_3:68380883-68380902 | Msa0136500:intron | 30.0% | |
| !! | GCTATTTTGTGACAACTTTT+GGG | - | chr1_3:68380913-68380932 | None:intergenic | 30.0% |
| !! | AGCTATTTTGTGACAACTTT+TGG | - | chr1_3:68380914-68380933 | None:intergenic | 30.0% |
| ACCTCATTTCTATTAGCAAA+TGG | - | chr1_3:68380998-68381017 | None:intergenic | 30.0% | |
| !! | AACTTGTTGAAAACATTCAG+AGG | - | chr1_3:68381077-68381096 | None:intergenic | 30.0% |
| !! | TTTTCAGCACTAGTTTGAAA+AGG | + | chr1_3:68381149-68381168 | Msa0136500:intron | 30.0% |
| TTGAACAGAATGAACAAAGA+AGG | + | chr1_3:68381172-68381191 | Msa0136500:intron | 30.0% | |
| AGTACTTCTTATAAGATCAG+AGG | - | chr1_3:68381228-68381247 | None:intergenic | 30.0% | |
| TACTTATGATGATCTCGAAA+AGG | + | chr1_3:68381244-68381263 | Msa0136500:intron | 30.0% | |
| ACTTATGATGATCTCGAAAA+GGG | + | chr1_3:68381245-68381264 | Msa0136500:intron | 30.0% | |
| ATGTGAAAAGGATGATTTAC+AGG | - | chr1_3:68381684-68381703 | None:intergenic | 30.0% | |
| AGAAACATCTTATCCATCTT+AGG | + | chr1_3:68381734-68381753 | Msa0136500:intron | 30.0% | |
| GAAACATCTTATCCATCTTA+GGG | + | chr1_3:68381735-68381754 | Msa0136500:intron | 30.0% | |
| AAACATCTTATCCATCTTAG+GGG | + | chr1_3:68381736-68381755 | Msa0136500:intron | 30.0% | |
| ! | TCAACCTTTTCTACTATATC+CGG | - | chr1_3:68381792-68381811 | None:intergenic | 30.0% |
| ! | TTTTCCATTCTTAGTACCAA+AGG | - | chr1_3:68381864-68381883 | None:intergenic | 30.0% |
| TTCATCAGCTGAATTTCAAA+AGG | + | chr1_3:68382004-68382023 | Msa0136500:CDS | 30.0% | |
| CAAAAGAAAAGGAGAAAAAC+AGG | - | chr1_3:68382048-68382067 | None:intergenic | 30.0% | |
| ! | TTAACTCATTTTCAGCGATT+GGG | + | chr1_3:68382121-68382140 | Msa0136500:intron | 30.0% |
| ACATAAGGAAATCAAGAGAT+TGG | - | chr1_3:68382150-68382169 | None:intergenic | 30.0% | |
| TATGTATGTCTGTGTTTAGA+AGG | + | chr1_3:68382238-68382257 | Msa0136500:intron | 30.0% | |
| !! | GAGAAGAGTATTATTTGGAT+TGG | - | chr1_3:68382335-68382354 | None:intergenic | 30.0% |
| ! | AAGGTTTTTGAATCATGCTT+AGG | - | chr1_3:68383023-68383042 | None:intergenic | 30.0% |
| TAGATTAAAATGAGAGAGGA+AGG | - | chr1_3:68383042-68383061 | None:intergenic | 30.0% | |
| ! | CTATAACTTAGGAATCCTTT+TGG | + | chr1_3:68383059-68383078 | Msa0136500:intron | 30.0% |
| !! | CAATTAAAGATGATGGAACA+TGG | - | chr1_3:68383281-68383300 | None:intergenic | 30.0% |
| CATGTTCCATCATCTTTAAT+TGG | + | chr1_3:68383279-68383298 | Msa0136500:intron | 30.0% | |
| GATCAAAGGTAAATTTGTGA+TGG | - | chr1_3:68383437-68383456 | None:intergenic | 30.0% | |
| !! | GATATGAAGCAGCTTTAAAT+TGG | + | chr1_3:68383485-68383504 | Msa0136500:intron | 30.0% |
| !! | AGCTTTAAATTGGACTTTGT+AGG | + | chr1_3:68383495-68383514 | Msa0136500:intron | 30.0% |
| ! | GCTTTAAATTGGACTTTGTA+GGG | + | chr1_3:68383496-68383515 | Msa0136500:intron | 30.0% |
| TAACTGCATCTTGAAATTGA+CGG | - | chr1_3:68383707-68383726 | None:intergenic | 30.0% | |
| CTCCTAAAGACATATTTGTA+AGG | - | chr1_3:68383815-68383834 | None:intergenic | 30.0% | |
| ! | TACAAATATGTCTTTAGGAG+AGG | + | chr1_3:68383815-68383834 | Msa0136500:intron | 30.0% |
| GTACCTAGTAATGACATTAT+AGG | - | chr1_3:68383860-68383879 | None:intergenic | 30.0% | |
| AAGAGAAAAAGAAACTACAG+CGG | - | chr1_3:68383913-68383932 | None:intergenic | 30.0% | |
| CATCATCAACCAGTAATTAA+TGG | - | chr1_3:68384046-68384065 | None:intergenic | 30.0% | |
| !! | TTGATGATGAATCAGCATAT+GGG | + | chr1_3:68384057-68384076 | Msa0136500:intron | 30.0% |
| ATAGAGTTTAAAAGACAGTC+TGG | - | chr1_3:68384132-68384151 | None:intergenic | 30.0% | |
| ! | CTAAAAGGACATTTGAAGTT+TGG | + | chr1_3:68384162-68384181 | Msa0136500:intron | 30.0% |
| ATCATACACAAAATGAAAGC+TGG | - | chr1_3:68384223-68384242 | None:intergenic | 30.0% | |
| ! | AGCTTTCATTTTGTGTATGA+TGG | + | chr1_3:68384222-68384241 | Msa0136500:intron | 30.0% |
| !! | CTTGCTATTATTCTTGTCAA+TGG | + | chr1_3:68384263-68384282 | Msa0136500:intron | 30.0% |
| GTGGTTTATCTTGAAAACTA+TGG | + | chr1_3:68384521-68384540 | Msa0136500:CDS | 30.0% | |
| ACTTGAAGAAACTGATGATA+GGG | - | chr1_3:68384595-68384614 | None:intergenic | 30.0% | |
| ATCAGTTTCTTCAAGTCAAT+GGG | + | chr1_3:68384599-68384618 | Msa0136500:CDS | 30.0% | |
| AAGACAGTAAATACTTCTGT+GGG | - | chr1_3:68384757-68384776 | None:intergenic | 30.0% | |
| !! | TTGGTTTGCTACTAATTGAT+TGG | + | chr1_3:68384775-68384794 | Msa0136500:three_prime_UTR | 30.0% |
| CAAACCATTGAATGATAAGA+GGG | + | chr1_3:68384833-68384852 | Msa0136500:three_prime_UTR | 30.0% | |
| ! | TTTTCCCTCTTATCATTCAA+TGG | - | chr1_3:68384840-68384859 | None:intergenic | 30.0% |
| AGTAATAACCTTCATATCAG+TGG | - | chr1_3:68384905-68384924 | None:intergenic | 30.0% | |
| ATATACTCACAGTATGGTAA+TGG | - | chr1_3:68384956-68384975 | None:intergenic | 30.0% | |
| AGTGATATATACTCACAGTA+TGG | - | chr1_3:68384962-68384981 | None:intergenic | 30.0% | |
| !! | ATTATTGATGGTGATGATGG+TGG | - | chr1_3:68379168-68379187 | None:intergenic | 35.0% |
| !! | CCTATTATTGATGGTGATGA+TGG | - | chr1_3:68379171-68379190 | None:intergenic | 35.0% |
| CCATCATCACCATCAATAAT+AGG | + | chr1_3:68379168-68379187 | Msa0136500:five_prime_UTR | 35.0% | |
| ! | AGGATTGGTGAAACAGAATT+TGG | + | chr1_3:68379188-68379207 | Msa0136500:five_prime_UTR | 35.0% |
| ! | GGATTGGTGAAACAGAATTT+GGG | + | chr1_3:68379189-68379208 | Msa0136500:five_prime_UTR | 35.0% |
| GATTGGTGAAACAGAATTTG+GGG | + | chr1_3:68379190-68379209 | Msa0136500:five_prime_UTR | 35.0% | |
| ATTGGTGAAACAGAATTTGG+GGG | + | chr1_3:68379191-68379210 | Msa0136500:five_prime_UTR | 35.0% | |
| ATTGCCATACTCTTATCCTT+CGG | + | chr1_3:68379238-68379257 | Msa0136500:CDS | 35.0% | |
| ATACCACATATTCAGAGCAA+GGG | - | chr1_3:68379351-68379370 | None:intergenic | 35.0% | |
| AATACCACATATTCAGAGCA+AGG | - | chr1_3:68379352-68379371 | None:intergenic | 35.0% | |
| ACAAAGGATGGTTTCTTGTT+AGG | + | chr1_3:68379482-68379501 | Msa0136500:CDS | 35.0% | |
| AGTAAGTAGCAACCATGAAT+AGG | - | chr1_3:68379610-68379629 | None:intergenic | 35.0% | |
| ! | GATATCTTGCTACTTCAATG+TGG | + | chr1_3:68379807-68379826 | Msa0136500:intron | 35.0% |
| AGCTTCCTTTAGTGTATGTT+TGG | + | chr1_3:68379852-68379871 | Msa0136500:intron | 35.0% | |
| !!! | ATGTTTGGTTCTACTTTTGG+AGG | + | chr1_3:68379867-68379886 | Msa0136500:intron | 35.0% |
| !!! | TGTTTGGTTCTACTTTTGGA+GGG | + | chr1_3:68379868-68379887 | Msa0136500:intron | 35.0% |
| ! | TACATAATTGATTCTCGAGG+TGG | + | chr1_3:68379891-68379910 | Msa0136500:intron | 35.0% |
| ATTGACCTGTTTGGATGTAT+TGG | + | chr1_3:68379924-68379943 | Msa0136500:intron | 35.0% | |
| CAAAACCAATACATCCAAAC+AGG | - | chr1_3:68379932-68379951 | None:intergenic | 35.0% | |
| !! | GTTTTGGACAGTGTTTGAAT+TGG | + | chr1_3:68380155-68380174 | Msa0136500:intron | 35.0% |
| !! | GGATCAAGGTTTTGATGTTT+GGG | + | chr1_3:68380410-68380429 | Msa0136500:CDS | 35.0% |
| TCTCAAAAGTTGTCCCAAAA+TGG | - | chr1_3:68380767-68380786 | None:intergenic | 35.0% | |
| AACAATAGAGAGAGAAAGAG+GGG | - | chr1_3:68380859-68380878 | None:intergenic | 35.0% | |
| ! | GCCATTTGCTAATAGAAATG+AGG | + | chr1_3:68380994-68381013 | Msa0136500:intron | 35.0% |
| ATTGTTTGATCTTGAGCAGT+TGG | + | chr1_3:68381316-68381335 | Msa0136500:intron | 35.0% | |
| TGACTAGAATTCTTCGACAA+TGG | - | chr1_3:68381406-68381425 | None:intergenic | 35.0% | |
| ! | TTGTCCTTTTGTAGCACTTT+TGG | + | chr1_3:68381544-68381563 | Msa0136500:intron | 35.0% |
| ! | TGTCCTTTTGTAGCACTTTT+GGG | + | chr1_3:68381545-68381564 | Msa0136500:intron | 35.0% |
| !! | AATCCCAAAAGTGCTACAAA+AGG | - | chr1_3:68381551-68381570 | None:intergenic | 35.0% |
| !!! | TTTTGTAGCACTTTTGGGAT+TGG | + | chr1_3:68381550-68381569 | Msa0136500:intron | 35.0% |
| AATGCTGGTAGAATGTGAAA+AGG | - | chr1_3:68381696-68381715 | None:intergenic | 35.0% | |
| ATGTAAGCTATGGAAAATGC+TGG | - | chr1_3:68381711-68381730 | None:intergenic | 35.0% | |
| GAAATAATTGTCCCCTAAGA+TGG | - | chr1_3:68381750-68381769 | None:intergenic | 35.0% | |
| TCAACCGGATATAGTAGAAA+AGG | + | chr1_3:68381785-68381804 | Msa0136500:CDS | 35.0% | |
| TCTGTCTCCAATTTCATACT+TGG | + | chr1_3:68381824-68381843 | Msa0136500:CDS | 35.0% | |
| TGTTCAGATGATTGCTACAA+TGG | + | chr1_3:68381978-68381997 | Msa0136500:intron | 35.0% | |
| GTTCAGATGATTGCTACAAT+GGG | + | chr1_3:68381979-68381998 | Msa0136500:intron | 35.0% | |
| TTTGCTAAGCTGGAAATACA+TGG | - | chr1_3:68382082-68382101 | None:intergenic | 35.0% | |
| ! | TCCAGCTTAGCAAATTTTCA+CGG | + | chr1_3:68382088-68382107 | Msa0136500:intron | 35.0% |
| ! | CTTAACTCATTTTCAGCGAT+TGG | + | chr1_3:68382120-68382139 | Msa0136500:intron | 35.0% |
| ACTTAGACGAGTATCACATA+AGG | - | chr1_3:68382165-68382184 | None:intergenic | 35.0% | |
| TGGCATTCATGAAAGACAAA+AGG | - | chr1_3:68382364-68382383 | None:intergenic | 35.0% | |
| TAATATATGTGTAGCGGTGA+TGG | - | chr1_3:68382539-68382558 | None:intergenic | 35.0% | |
| !! | TTCAAGTTTTTGGAGGATGA+TGG | - | chr1_3:68383237-68383256 | None:intergenic | 35.0% |
| !! | GAAAAGGTGGTTCAAGTTTT+TGG | - | chr1_3:68383247-68383266 | None:intergenic | 35.0% |
| ! | TGACTTTTCTGACTATTCAC+TGG | + | chr1_3:68383326-68383345 | Msa0136500:intron | 35.0% |
| TAAATTGGACTTTGTAGGGA+CGG | + | chr1_3:68383500-68383519 | Msa0136500:intron | 35.0% | |
| GGGAAGTAATAATGTTCAGT+GGG | + | chr1_3:68383530-68383549 | Msa0136500:intron | 35.0% | |
| GAATAAACAAACTGGTACCA+AGG | - | chr1_3:68383603-68383622 | None:intergenic | 35.0% | |
| GAAAAATAGAGACCTCTCAT+TGG | - | chr1_3:68383675-68383694 | None:intergenic | 35.0% | |
| TTGAAATTGACGGAATGACA+TGG | - | chr1_3:68383697-68383716 | None:intergenic | 35.0% | |
| ! | AAATATGTCTTTAGGAGAGG+AGG | + | chr1_3:68383818-68383837 | Msa0136500:intron | 35.0% |
| ! | GCTGTAGTTTCTTTTTCTCT+TGG | + | chr1_3:68383912-68383931 | Msa0136500:intron | 35.0% |
| !! | GTTGATGATGAATCAGCATA+TGG | + | chr1_3:68384056-68384075 | Msa0136500:intron | 35.0% |
| ACAGTCTGGTGGAAATAATT+AGG | - | chr1_3:68384118-68384137 | None:intergenic | 35.0% | |
| AAGCTTTCCATAATCGTACT+TGG | - | chr1_3:68384342-68384361 | None:intergenic | 35.0% | |
| ATCAACAAAGGCAATGATCT+GGG | - | chr1_3:68384422-68384441 | None:intergenic | 35.0% | |
| !! | TTTTCAAGATAAACCACCTC+AGG | - | chr1_3:68384518-68384537 | None:intergenic | 35.0% |
| GACTTGAAGAAACTGATGAT+AGG | - | chr1_3:68384596-68384615 | None:intergenic | 35.0% | |
| CATCAGTTTCTTCAAGTCAA+TGG | + | chr1_3:68384598-68384617 | Msa0136500:CDS | 35.0% | |
| TCAGTTTCTTCAAGTCAATG+GGG | + | chr1_3:68384600-68384619 | Msa0136500:CDS | 35.0% | |
| TTACAGACACAACATCAAAG+TGG | - | chr1_3:68384717-68384736 | None:intergenic | 35.0% | |
| CAAGACAGTAAATACTTCTG+TGG | - | chr1_3:68384758-68384777 | None:intergenic | 35.0% | |
| !! | CACAGAAGTATTTACTGTCT+TGG | + | chr1_3:68384756-68384775 | Msa0136500:three_prime_UTR | 35.0% |
| CCTCTTATCATTCAATGGTT+TGG | - | chr1_3:68384835-68384854 | None:intergenic | 35.0% | |
| CCAAACCATTGAATGATAAG+AGG | + | chr1_3:68384832-68384851 | Msa0136500:three_prime_UTR | 35.0% | |
| AACCACCTAACAGTTAGTAC+AGG | + | chr1_3:68379042-68379061 | Msa0136500:five_prime_UTR | 40.0% | |
| ACCACCTAACAGTTAGTACA+GGG | + | chr1_3:68379043-68379062 | Msa0136500:five_prime_UTR | 40.0% | |
| ATTTATACTCTCGGGTTCGA+TGG | - | chr1_3:68379122-68379141 | None:intergenic | 40.0% | |
| TGAAACAGAATTTGGGGGAT+GGG | + | chr1_3:68379196-68379215 | Msa0136500:exon | 40.0% | |
| GTTTCCGAAGGATAAGAGTA+TGG | - | chr1_3:68379245-68379264 | None:intergenic | 40.0% | |
| !! | AGAGAGTTGGTTGTTGTTTG+GGG | - | chr1_3:68379300-68379319 | None:intergenic | 40.0% |
| !! | CAGAGAGTTGGTTGTTGTTT+GGG | - | chr1_3:68379301-68379320 | None:intergenic | 40.0% |
| ! | ACAGAGAGTTGGTTGTTGTT+TGG | - | chr1_3:68379302-68379321 | None:intergenic | 40.0% |
| ATGAGTTCATCACAGAGAGT+TGG | - | chr1_3:68379313-68379332 | None:intergenic | 40.0% | |
| ! | TTACCCTTGCTCTGAATATG+TGG | + | chr1_3:68379345-68379364 | Msa0136500:CDS | 40.0% |
| GCTCAAAAACAACAACAACG+AGG | + | chr1_3:68379560-68379579 | Msa0136500:CDS | 40.0% | |
| ! | ACGTCTTCTATCAGAAGTGT+CGG | - | chr1_3:68379689-68379708 | None:intergenic | 40.0% |
| ATGAAGCACATACACACACA+TGG | - | chr1_3:68379763-68379782 | None:intergenic | 40.0% | |
| ! | GGGTACATAATTGATTCTCG+AGG | + | chr1_3:68379888-68379907 | Msa0136500:intron | 40.0% |
| !!! | CTGTCATTTTTTAGGGGAAG+TGG | + | chr1_3:68380219-68380238 | Msa0136500:intron | 40.0% |
| ACCTGCCTGATTGTATCAAA+TGG | - | chr1_3:68380340-68380359 | None:intergenic | 40.0% | |
| ATGAAGCCCAATGATTGTTC+TGG | - | chr1_3:68380384-68380403 | None:intergenic | 40.0% | |
| !! | CGGATCAAGGTTTTGATGTT+TGG | + | chr1_3:68380409-68380428 | Msa0136500:CDS | 40.0% |
| !! | CAAGGTTTTGATGTTTGGGT+AGG | + | chr1_3:68380414-68380433 | Msa0136500:CDS | 40.0% |
| ! | ATACGATGTGACTTGTGCTT+TGG | + | chr1_3:68381472-68381491 | Msa0136500:intron | 40.0% |
| ATTTGTAGTTGGGCATTCAC+AGG | + | chr1_3:68381647-68381666 | Msa0136500:CDS | 40.0% | |
| TACTATATCCGGTTGAGTGA+AGG | - | chr1_3:68381781-68381800 | None:intergenic | 40.0% | |
| GGATCATATTAGTGCACCTT+TGG | + | chr1_3:68381845-68381864 | Msa0136500:CDS | 40.0% | |
| TGCACCTTTGGTACTAAGAA+TGG | + | chr1_3:68381857-68381876 | Msa0136500:CDS | 40.0% | |
| GGAAAAGATGCACATTGATC+AGG | + | chr1_3:68381878-68381897 | Msa0136500:CDS | 40.0% | |
| AAACAGGACAGAACGAAAAC+TGG | - | chr1_3:68382032-68382051 | None:intergenic | 40.0% | |
| ! | CCAGCTTAGCAAATTTTCAC+GGG | + | chr1_3:68382089-68382108 | Msa0136500:intron | 40.0% |
| ! | CAGCTTAGCAAATTTTCACG+GGG | + | chr1_3:68382090-68382109 | Msa0136500:intron | 40.0% |
| TGAGAGACATGAACCTGTAA+TGG | - | chr1_3:68382207-68382226 | None:intergenic | 40.0% | |
| TGCCATTGCAATTACTTTGC+TGG | + | chr1_3:68382379-68382398 | Msa0136500:intron | 40.0% | |
| AGCCAGCAAAGTAATTGCAA+TGG | - | chr1_3:68382384-68382403 | None:intergenic | 40.0% | |
| TTTGTCTGAGTTGTCTGACA+TGG | + | chr1_3:68382823-68382842 | Msa0136500:intron | 40.0% | |
| ATGGCTCGTATGAGTGTTAT+AGG | + | chr1_3:68382842-68382861 | Msa0136500:intron | 40.0% | |
| CGTATGAGTGTTATAGGTGT+CGG | + | chr1_3:68382848-68382867 | Msa0136500:intron | 40.0% | |
| CTTAGGCAAGTTATGAAGCA+CGG | - | chr1_3:68383006-68383025 | None:intergenic | 40.0% | |
| ATACACGCAGAATGACCAAA+AGG | - | chr1_3:68383077-68383096 | None:intergenic | 40.0% | |
| !!! | TTTTTGGAGGATGATGGATG+AGG | - | chr1_3:68383231-68383250 | None:intergenic | 40.0% |
| !! | AAGGTGGTTCAAGTTTTTGG+AGG | - | chr1_3:68383244-68383263 | None:intergenic | 40.0% |
| ! | CATGGAACATACTCTGGAAA+AGG | - | chr1_3:68383263-68383282 | None:intergenic | 40.0% |
| ATGGAACATGGAACATACTC+TGG | - | chr1_3:68383269-68383288 | None:intergenic | 40.0% | |
| AAATTGGACTTTGTAGGGAC+GGG | + | chr1_3:68383501-68383520 | Msa0136500:intron | 40.0% | |
| GGGGAAGTAATAATGTTCAG+TGG | + | chr1_3:68383529-68383548 | Msa0136500:intron | 40.0% | |
| TCTCTTCTACATGACAACCT+TGG | + | chr1_3:68383583-68383602 | Msa0136500:intron | 40.0% | |
| TTACACTGACATCCAATGAG+AGG | + | chr1_3:68383660-68383679 | Msa0136500:intron | 40.0% | |
| TGACATGCTTTATCTTGCCA+AGG | + | chr1_3:68383981-68384000 | Msa0136500:intron | 40.0% | |
| CTTCGTACAAATATGCTCCT+TGG | - | chr1_3:68384001-68384020 | None:intergenic | 40.0% | |
| ATGATGAATCAGCATATGGG+TGG | + | chr1_3:68384060-68384079 | Msa0136500:intron | 40.0% | |
| GAGTTTAAAAGACAGTCTGG+TGG | - | chr1_3:68384129-68384148 | None:intergenic | 40.0% | |
| ACCTTCTCCAAGTACGATTA+TGG | + | chr1_3:68384332-68384351 | Msa0136500:CDS | 40.0% | |
| TCCATAATCGTACTTGGAGA+AGG | - | chr1_3:68384336-68384355 | None:intergenic | 40.0% | |
| ! | ATGCGGCTAAGGTCAAATTT+TGG | - | chr1_3:68384398-68384417 | None:intergenic | 40.0% |
| CATCAACAAAGGCAATGATC+TGG | - | chr1_3:68384423-68384442 | None:intergenic | 40.0% | |
| CAGATCATTGCCTTTGTTGA+TGG | + | chr1_3:68384421-68384440 | Msa0136500:CDS | 40.0% | |
| !! | TTGCCTTTGTTGATGGCTTA+TGG | + | chr1_3:68384428-68384447 | Msa0136500:CDS | 40.0% |
| !! | TGCCTTTGTTGATGGCTTAT+GGG | + | chr1_3:68384429-68384448 | Msa0136500:CDS | 40.0% |
| AGACACAACATCAAAGTGGA+CGG | - | chr1_3:68384713-68384732 | None:intergenic | 40.0% | |
| CTCTCAGTGAAGATGTAGAA+AGG | + | chr1_3:68384869-68384888 | Msa0136500:three_prime_UTR | 40.0% | |
| CAGTGAAGATGTAGAAAGGA+TGG | + | chr1_3:68384873-68384892 | Msa0136500:three_prime_UTR | 40.0% | |
| ACCCTGTACTAACTGTTAGG+TGG | - | chr1_3:68379047-68379066 | None:intergenic | 45.0% | |
| ACCTAACAGTTAGTACAGGG+TGG | + | chr1_3:68379046-68379065 | Msa0136500:five_prime_UTR | 45.0% | |
| ACCACCCTGTACTAACTGTT+AGG | - | chr1_3:68379050-68379069 | None:intergenic | 45.0% | |
| GTGAAACAGAATTTGGGGGA+TGG | + | chr1_3:68379195-68379214 | Msa0136500:exon | 45.0% | |
| GAAACAGAATTTGGGGGATG+GGG | + | chr1_3:68379197-68379216 | Msa0136500:exon | 45.0% | |
| !! | AGAGTTGGTTGTTGTTTGGG+GGG | - | chr1_3:68379298-68379317 | None:intergenic | 45.0% |
| !! | GAGAGTTGGTTGTTGTTTGG+GGG | - | chr1_3:68379299-68379318 | None:intergenic | 45.0% |
| TAGCAACCATGAATAGGCCA+TGG | - | chr1_3:68379604-68379623 | None:intergenic | 45.0% | |
| CTTCTGATAGAAGACGTGTC+TGG | + | chr1_3:68379692-68379711 | Msa0136500:intron | 45.0% | |
| GCCATTTGATACAATCAGGC+AGG | + | chr1_3:68380336-68380355 | Msa0136500:intron | 45.0% | |
| ! | GCAATTTTGTGGAACACCCT+TGG | - | chr1_3:68380636-68380655 | None:intergenic | 45.0% |
| CTCGAAAAGGGAGAACAGAA+TGG | + | chr1_3:68381257-68381276 | Msa0136500:intron | 45.0% | |
| ATTAGCCCTGTACGATCTTG+CGG | + | chr1_3:68381584-68381603 | Msa0136500:CDS | 45.0% | |
| CATTTCCGCAAGATCGTACA+GGG | - | chr1_3:68381592-68381611 | None:intergenic | 45.0% | |
| TCATTTCCGCAAGATCGTAC+AGG | - | chr1_3:68381593-68381612 | None:intergenic | 45.0% | |
| ! | TTTTGCTGCCTTCACTCAAC+CGG | + | chr1_3:68381770-68381789 | Msa0136500:CDS | 45.0% |
| !! | CCCGTGAAAATTTGCTAAGC+TGG | - | chr1_3:68382092-68382111 | None:intergenic | 45.0% |
| GACATGCTGTCATCCATTAC+AGG | + | chr1_3:68382191-68382210 | Msa0136500:CDS | 45.0% | |
| CGCACAATTCAGATCAGAGA+GGG | - | chr1_3:68382481-68382500 | None:intergenic | 45.0% | |
| TTACTTCGACACTCCTAGAC+CGG | - | chr1_3:68382877-68382896 | None:intergenic | 45.0% | |
| ! | GGAACATACTCTGGAAAAGG+TGG | - | chr1_3:68383260-68383279 | None:intergenic | 45.0% |
| !! | GCGCTGTTTTCAATTAGCAG+TGG | + | chr1_3:68383348-68383367 | Msa0136500:intron | 45.0% |
| AATTGGACTTTGTAGGGACG+GGG | + | chr1_3:68383502-68383521 | Msa0136500:intron | 45.0% | |
| AATCAGCATATGGGTGGAAG+TGG | + | chr1_3:68384066-68384085 | Msa0136500:intron | 45.0% | |
| GGATCACTGGAGAACATATG+AGG | - | chr1_3:68384304-68384323 | None:intergenic | 45.0% | |
| !! | ACTTGGAGAAGGTACCTTTG+CGG | - | chr1_3:68384325-68384344 | None:intergenic | 45.0% |
| ! | CGGCTAAGGTCAAATTTTGG+TGG | - | chr1_3:68384395-68384414 | None:intergenic | 45.0% |
| AAGGCAATGATCTGGGTATG+CGG | - | chr1_3:68384415-68384434 | None:intergenic | 45.0% | |
| !! | GCCTTTGTTGATGGCTTATG+GGG | + | chr1_3:68384430-68384449 | Msa0136500:CDS | 45.0% |
| !! | CCTTTGTTGATGGCTTATGG+GGG | + | chr1_3:68384431-68384450 | Msa0136500:CDS | 45.0% |
| TGATTTCCAGCACACACTCA+AGG | + | chr1_3:68384478-68384497 | Msa0136500:CDS | 45.0% | |
| AAGATAAACCACCTCAGGTG+TGG | - | chr1_3:68384513-68384532 | None:intergenic | 45.0% | |
| !! | TATATTAATTTATTTATAGA+CGG | + | chr1_3:68382552-68382571 | Msa0136500:intron | 5.0% |
| TACAGAACACGCGCCAATTG+AGG | + | chr1_3:68379075-68379094 | Msa0136500:five_prime_UTR | 50.0% | |
| AACATCGCTCACTCCTTCGA+CGG | + | chr1_3:68379262-68379281 | Msa0136500:CDS | 50.0% | |
| GATGAACTCATTCTTCCCGC+TGG | + | chr1_3:68379322-68379341 | Msa0136500:CDS | 50.0% | |
| TTCAGAGCAAGGGTAACCAG+CGG | - | chr1_3:68379341-68379360 | None:intergenic | 50.0% | |
| ACAACAACAACGAGGTCCTC+CGG | + | chr1_3:68379568-68379587 | Msa0136500:CDS | 50.0% | |
| GCTTCTCCATGGCCTATTCA+TGG | + | chr1_3:68379595-68379614 | Msa0136500:CDS | 50.0% | |
| ACAATCAGGCAGGTGATGCA+TGG | + | chr1_3:68380346-68380365 | Msa0136500:intron | 50.0% | |
| ATCATTGGGCTTCATCCTCG+CGG | + | chr1_3:68380389-68380408 | Msa0136500:CDS | 50.0% | |
| CATCAAAACCTTGATCCGCG+AGG | - | chr1_3:68380407-68380426 | None:intergenic | 50.0% | |
| GTTTGGGTAGGAAATGTGCG+TGG | + | chr1_3:68380426-68380445 | Msa0136500:CDS | 50.0% | |
| GAAATGTGCGTGGAACACGT+TGG | + | chr1_3:68380436-68380455 | Msa0136500:CDS | 50.0% | |
| !!! | AGCACTTTTGGGATTGGAGC+TGG | + | chr1_3:68381556-68381575 | Msa0136500:intron | 50.0% |
| TCAGATCAGAGAGGGTGAGT+AGG | - | chr1_3:68382473-68382492 | None:intergenic | 50.0% | |
| GCGCACAATTCAGATCAGAG+AGG | - | chr1_3:68382482-68382501 | None:intergenic | 50.0% | |
| !! | GTGTTATAGGTGTCGGACAC+CGG | + | chr1_3:68382855-68382874 | Msa0136500:intron | 50.0% |
| ACGTGTCGTACGAGTGTCAT+GGG | + | chr1_3:68382942-68382961 | Msa0136500:intron | 50.0% | |
| TATGAAGCACGGACACCTCT+AGG | - | chr1_3:68382995-68383014 | None:intergenic | 50.0% | |
| ATTGGACTTTGTAGGGACGG+GGG | + | chr1_3:68383503-68383522 | Msa0136500:intron | 50.0% | |
| TGTTCTCCAGTGATCCGCAA+AGG | + | chr1_3:68384308-68384327 | Msa0136500:intron | 50.0% | |
| ! | AAGGTACCTTTGCGGATCAC+TGG | - | chr1_3:68384317-68384336 | None:intergenic | 50.0% |
| ATGATCTGGGTATGCGGCTA+AGG | - | chr1_3:68384409-68384428 | None:intergenic | 50.0% | |
| CCCCCATAAGCCATCAACAA+AGG | - | chr1_3:68384434-68384453 | None:intergenic | 50.0% | |
| TAAACCACCTCAGGTGTGGA+TGG | - | chr1_3:68384509-68384528 | None:intergenic | 50.0% | |
| GGAGTGCACCACTGATATGA+AGG | + | chr1_3:68384894-68384913 | Msa0136500:three_prime_UTR | 50.0% | |
| TCACTCCAACGCGCCTCAAT+TGG | - | chr1_3:68379091-68379110 | None:intergenic | 55.0% | |
| ATTGAGGCGCGTTGGAGTGA+TGG | + | chr1_3:68379091-68379110 | Msa0136500:five_prime_UTR | 55.0% | |
| !! | TTTGGGGGATGGGGAGTGTT+TGG | + | chr1_3:68379206-68379225 | Msa0136500:exon | 55.0% |
| GGAGTGAGCGATGTTTCCGA+AGG | - | chr1_3:68379257-68379276 | None:intergenic | 55.0% | |
| TCAGAGCAAGGGTAACCAGC+GGG | - | chr1_3:68379340-68379359 | None:intergenic | 55.0% | |
| AGGCCATGGAGAAGCAGAAC+CGG | - | chr1_3:68379590-68379609 | None:intergenic | 55.0% | |
| GACACTCGTACGACACGTGT+CGG | - | chr1_3:68382940-68382959 | None:intergenic | 55.0% | |
| CACGTGTCGTACGAGTGTCA+TGG | + | chr1_3:68382941-68382960 | Msa0136500:intron | 55.0% | |
| ! | TACGAGTGTCATGGGAGTGC+CGG | + | chr1_3:68382950-68382969 | Msa0136500:intron | 55.0% |
| TTGCTTCAACGAGTCACGCG+TGG | + | chr1_3:68383185-68383204 | Msa0136500:CDS | 55.0% | |
| ACTTTGTAGGGACGGGGGTT+GGG | + | chr1_3:68383508-68383527 | Msa0136500:intron | 55.0% | |
| GCAGTTCCTTGAGTGTGTGC+TGG | - | chr1_3:68384487-68384506 | None:intergenic | 55.0% | |
| ATCGCTCACTCCTTCGACGG+CGG | + | chr1_3:68379265-68379284 | Msa0136500:CDS | 60.0% | |
| CCATGGAGAAGCAGAACCGG+AGG | - | chr1_3:68379587-68379606 | None:intergenic | 60.0% | |
| CCTCCGGTTCTGCTTCTCCA+TGG | + | chr1_3:68379584-68379603 | Msa0136500:CDS | 60.0% | |
| GGCTTCATCCTCGCGGATCA+AGG | + | chr1_3:68380396-68380415 | Msa0136500:CDS | 60.0% | |
| CGTGGAACACGTTGGAGCCA+TGG | + | chr1_3:68380444-68380463 | Msa0136500:CDS | 60.0% | |
| !! | TAGGTGTCGGACACCGGTCT+AGG | + | chr1_3:68382861-68382880 | Msa0136500:intron | 60.0% |
| !! | CTCTAGGACTAGGCGTGTCG+CGG | - | chr1_3:68382979-68382998 | None:intergenic | 60.0% |
| !! | GCACGGACACCTCTAGGACT+AGG | - | chr1_3:68382989-68383008 | None:intergenic | 60.0% |
| GACTTTGTAGGGACGGGGGT+TGG | + | chr1_3:68383507-68383526 | Msa0136500:intron | 60.0% | |
| CTTTGTAGGGACGGGGGTTG+GGG | + | chr1_3:68383509-68383528 | Msa0136500:intron | 60.0% | |
| TTTGTAGGGACGGGGGTTGG+GGG | + | chr1_3:68383510-68383529 | Msa0136500:intron | 60.0% | |
| GGAACTGCCATCCACACCTG+AGG | + | chr1_3:68384499-68384518 | Msa0136500:CDS | 60.0% | |
| ACTGCCATCCACACCTGAGG+TGG | + | chr1_3:68384502-68384521 | Msa0136500:CDS | 60.0% | |
| ACGCGCCAATTGAGGCGCGT+TGG | + | chr1_3:68379083-68379102 | Msa0136500:five_prime_UTR | 65.0% | |
| ACTAGGCGTGTCGCGGTGTC+CGG | - | chr1_3:68382972-68382991 | None:intergenic | 65.0% | |
| CGCGACACGCCTAGTCCTAG+AGG | + | chr1_3:68382977-68382996 | Msa0136500:intron | 65.0% | |
| ! | GGGTGCGCTGCCGCCGTCGA+AGG | - | chr1_3:68379278-68379297 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 68379041 | 68385063 | 68379041 | ID=Msa0136500;Name=Msa0136500 |
| chr1_3 | mRNA | 68379041 | 68385063 | 68379041 | ID=Msa0136500-mRNA-1;Parent=Msa0136500;Name=Msa0136500-mRNA-1;_AED=0.25;_eAED=0.25;_QI=173|1|1|1|1|1|9|423|408 |
| chr1_3 | exon | 68379041 | 68379366 | 68379041 | ID=Msa0136500-mRNA-1:exon:23618;Parent=Msa0136500-mRNA-1 |
| chr1_3 | exon | 68379476 | 68379616 | 68379476 | ID=Msa0136500-mRNA-1:exon:23619;Parent=Msa0136500-mRNA-1 |
| chr1_3 | exon | 68380354 | 68380494 | 68380354 | ID=Msa0136500-mRNA-1:exon:23620;Parent=Msa0136500-mRNA-1 |
| chr1_3 | exon | 68381558 | 68381668 | 68381558 | ID=Msa0136500-mRNA-1:exon:23621;Parent=Msa0136500-mRNA-1 |
| chr1_3 | exon | 68381756 | 68381899 | 68381756 | ID=Msa0136500-mRNA-1:exon:23622;Parent=Msa0136500-mRNA-1 |
| chr1_3 | exon | 68381985 | 68382025 | 68381985 | ID=Msa0136500-mRNA-1:exon:23623;Parent=Msa0136500-mRNA-1 |
| chr1_3 | exon | 68382136 | 68382212 | 68382136 | ID=Msa0136500-mRNA-1:exon:23624;Parent=Msa0136500-mRNA-1 |
| chr1_3 | exon | 68383175 | 68383270 | 68383175 | ID=Msa0136500-mRNA-1:exon:23625;Parent=Msa0136500-mRNA-1 |
| chr1_3 | exon | 68384318 | 68385063 | 68384318 | ID=Msa0136500-mRNA-1:exon:23626;Parent=Msa0136500-mRNA-1 |
| chr1_3 | five_prime_UTR | 68379041 | 68379213 | 68379041 | ID=Msa0136500-mRNA-1:five_prime_utr;Parent=Msa0136500-mRNA-1 |
| chr1_3 | CDS | 68379214 | 68379366 | 68379214 | ID=Msa0136500-mRNA-1:cds;Parent=Msa0136500-mRNA-1 |
| chr1_3 | CDS | 68379476 | 68379616 | 68379476 | ID=Msa0136500-mRNA-1:cds;Parent=Msa0136500-mRNA-1 |
| chr1_3 | CDS | 68380354 | 68380494 | 68380354 | ID=Msa0136500-mRNA-1:cds;Parent=Msa0136500-mRNA-1 |
| chr1_3 | CDS | 68381558 | 68381668 | 68381558 | ID=Msa0136500-mRNA-1:cds;Parent=Msa0136500-mRNA-1 |
| chr1_3 | CDS | 68381756 | 68381899 | 68381756 | ID=Msa0136500-mRNA-1:cds;Parent=Msa0136500-mRNA-1 |
| chr1_3 | CDS | 68381985 | 68382025 | 68381985 | ID=Msa0136500-mRNA-1:cds;Parent=Msa0136500-mRNA-1 |
| chr1_3 | CDS | 68382136 | 68382212 | 68382136 | ID=Msa0136500-mRNA-1:cds;Parent=Msa0136500-mRNA-1 |
| chr1_3 | CDS | 68383175 | 68383270 | 68383175 | ID=Msa0136500-mRNA-1:cds;Parent=Msa0136500-mRNA-1 |
| chr1_3 | CDS | 68384318 | 68384640 | 68384318 | ID=Msa0136500-mRNA-1:cds;Parent=Msa0136500-mRNA-1 |
| chr1_3 | three_prime_UTR | 68384641 | 68385063 | 68384641 | ID=Msa0136500-mRNA-1:three_prime_utr;Parent=Msa0136500-mRNA-1 |
| Gene Sequence |
| Protein sequence |
