Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0089390 | XP_013470044.1 | 98.280 | 407 | 5 | 2 | 1 | 407 | 1 | 405 | 0.0 | 822 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0089390 | sp|Q71DJ5|LIP1_ARATH | 63.271 | 373 | 126 | 1 | 34 | 406 | 31 | 392 | 0.0 | 511 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0089390 | A0A072VQK3 | 98.280 | 407 | 5 | 2 | 1 | 407 | 1 | 405 | 0.0 | 822 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0042110 | Msa0089390 | 0.942200 | 1.094956e-101 | -8.615850e-47 |
| Msa0046860 | Msa0089390 | 0.803180 | 3.942371e-49 | -8.615850e-47 |
| Msa0060720 | Msa0089390 | 0.810205 | 1.294181e-50 | -8.615850e-47 |
| Msa0082340 | Msa0089390 | 0.812089 | 5.052248e-51 | -8.615850e-47 |
| Msa0089390 | Msa0136500 | 0.869952 | 2.104571e-66 | -8.615850e-47 |
| Msa0089390 | Msa0151780 | 0.817574 | 3.073005e-52 | -8.615850e-47 |
| Msa0089390 | Msa0185550 | 0.801423 | 9.069244e-49 | -8.615850e-47 |
| Msa0089390 | Msa0187560 | 0.813537 | 2.434238e-51 | -8.615850e-47 |
| Msa0089390 | Msa0266010 | 0.820700 | 5.971991e-53 | -8.615850e-47 |
| Msa0089390 | Msa0290040 | 0.803623 | 3.191352e-49 | -8.615850e-47 |
| Msa0089390 | Msa0303950 | 0.801484 | 8.808995e-49 | -8.615850e-47 |
| Msa0089390 | Msa0440220 | 0.801933 | 7.125219e-49 | -8.615850e-47 |
| Msa0089390 | Msa0481620 | 0.811816 | 5.793131e-51 | -8.615850e-47 |
| Msa0089390 | Msa0486240 | 0.815642 | 8.326870e-52 | -8.615850e-47 |
| Msa0089390 | Msa0538100 | 0.803341 | 3.651368e-49 | -8.615850e-47 |
| Msa0089390 | Msa0558220 | 0.814549 | 1.456022e-51 | -8.615850e-47 |
| Msa0089390 | Msa0585770 | 0.803497 | 3.389175e-49 | -8.615850e-47 |
| Msa0089390 | Msa0749940 | 0.802731 | 4.880817e-49 | -8.615850e-47 |
| Msa0089390 | Msa0798500 | 0.801799 | 7.593333e-49 | -8.615850e-47 |
| Msa0089390 | Msa0816860 | 0.803062 | 4.170576e-49 | -8.615850e-47 |
| Msa0089390 | Msa0968010 | 0.810821 | 9.527269e-51 | -8.615850e-47 |
| Msa0089390 | Msa1129320 | 0.815331 | 9.764943e-52 | -8.615850e-47 |
| Msa0089390 | Msa1143910 | 0.833888 | 4.117536e-56 | -8.615850e-47 |
| Msa0089390 | Msa1206440 | 0.804413 | 2.186620e-49 | -8.615850e-47 |
| Msa0089390 | Msa1216820 | 0.812022 | 5.224393e-51 | -8.615850e-47 |
| Msa0089390 | Msa1217020 | 0.825401 | 4.781725e-54 | -8.615850e-47 |
| Msa0089390 | Msa1217170 | 0.829063 | 6.348390e-55 | -8.615850e-47 |
| Msa0089390 | Msa1224150 | 0.808162 | 3.546275e-50 | -8.615850e-47 |
| Msa0089390 | Msa1263460 | 0.811634 | 6.345748e-51 | -8.615850e-47 |
| Msa0089390 | Msa1348770 | 0.803267 | 3.783061e-49 | -8.615850e-47 |
| Msa0089390 | Msa1387650 | 0.812600 | 3.906822e-51 | -8.615850e-47 |
| Msa0089390 | Msa1397520 | 0.869826 | 2.313638e-66 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0089390 | MtrunA17_Chr1g0207891 | 98.280 | 407 | 5 | 2 | 1 | 407 | 1 | 405 | 0.0 | 822 |
| Msa0089390 | MtrunA17_Chr5g0438751 | 40.053 | 377 | 208 | 5 | 29 | 399 | 36 | 400 | 4.60e-105 | 316 |
| Msa0089390 | MtrunA17_Chr7g0250081 | 40.691 | 376 | 199 | 6 | 35 | 400 | 43 | 404 | 9.50e-102 | 308 |
| Msa0089390 | MtrunA17_Chr7g0225611 | 39.314 | 379 | 217 | 4 | 29 | 401 | 41 | 412 | 7.83e-101 | 305 |
| Msa0089390 | MtrunA17_Chr6g0462811 | 39.623 | 371 | 169 | 6 | 35 | 400 | 44 | 364 | 4.38e-89 | 274 |
| Msa0089390 | MtrunA17_Chr3g0120021 | 36.000 | 425 | 215 | 7 | 23 | 400 | 31 | 445 | 2.15e-86 | 270 |
| Msa0089390 | MtrunA17_Chr7g0250091 | 40.984 | 305 | 157 | 4 | 101 | 399 | 64 | 351 | 3.34e-78 | 245 |
| Msa0089390 | MtrunA17_Chr6g0462831 | 41.132 | 265 | 144 | 6 | 144 | 400 | 3 | 263 | 6.70e-59 | 192 |
| Msa0089390 | MtrunA17_Chr3g0120041 | 44.565 | 184 | 92 | 1 | 35 | 218 | 47 | 220 | 5.08e-51 | 172 |
| Msa0089390 | MtrunA17_Chr3g0119931 | 42.697 | 178 | 92 | 2 | 35 | 212 | 43 | 210 | 3.31e-48 | 164 |
| Msa0089390 | MtrunA17_Chr6g0459361 | 36.816 | 201 | 120 | 3 | 19 | 218 | 30 | 224 | 1.27e-44 | 155 |
| Msa0089390 | MtrunA17_Chr6g0459381 | 36.607 | 224 | 130 | 4 | 1 | 218 | 7 | 224 | 1.85e-44 | 155 |
| Msa0089390 | MtrunA17_Chr6g0459401 | 39.459 | 185 | 105 | 3 | 35 | 218 | 46 | 224 | 7.35e-44 | 153 |
| Msa0089390 | MtrunA17_Chr6g0459421 | 39.459 | 185 | 105 | 3 | 35 | 218 | 46 | 224 | 8.17e-44 | 153 |
| Msa0089390 | MtrunA17_Chr3g0120031 | 43.636 | 165 | 85 | 4 | 244 | 400 | 8 | 172 | 2.80e-39 | 138 |
| Msa0089390 | MtrunA17_Chr3g0119941 | 47.101 | 138 | 68 | 3 | 268 | 400 | 30 | 167 | 1.11e-36 | 131 |
| Msa0089390 | MtrunA17_Chr6g0459391 | 36.486 | 148 | 88 | 2 | 258 | 399 | 25 | 172 | 2.92e-31 | 117 |
| Msa0089390 | MtrunA17_Chr5g0394731 | 36.364 | 132 | 79 | 1 | 111 | 242 | 20 | 146 | 2.32e-28 | 108 |
| Msa0089390 | MtrunA17_Chr6g0459411 | 34.559 | 136 | 83 | 2 | 270 | 399 | 5 | 140 | 6.71e-24 | 96.7 |
| Msa0089390 | MtrunA17_Chr6g0459431 | 33.824 | 136 | 84 | 2 | 270 | 399 | 5 | 140 | 1.13e-22 | 93.2 |
| Msa0089390 | MtrunA17_Chr6g0459371 | 34.483 | 87 | 52 | 1 | 318 | 399 | 1 | 87 | 6.24e-16 | 72.8 |
| Msa0089390 | MtrunA17_Chr5g0421521 | 90.625 | 32 | 3 | 0 | 269 | 300 | 900 | 931 | 9.57e-13 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0089390 | AT2G15230.1 | 63.271 | 373 | 126 | 1 | 34 | 406 | 31 | 392 | 0.0 | 511 |
| Msa0089390 | AT5G14180.1 | 36.816 | 402 | 234 | 7 | 6 | 399 | 26 | 415 | 4.61e-95 | 291 |
| Msa0089390 | AT5G14180.4 | 40.065 | 307 | 178 | 3 | 99 | 399 | 9 | 315 | 3.03e-82 | 255 |
| Msa0089390 | AT5G14180.2 | 40.000 | 305 | 177 | 3 | 101 | 399 | 2 | 306 | 4.06e-82 | 254 |
| Msa0089390 | AT5G14180.3 | 36.913 | 298 | 173 | 5 | 6 | 300 | 26 | 311 | 8.28e-68 | 218 |
| Msa0089390 | AT5G14180.5 | 35.448 | 268 | 158 | 5 | 6 | 270 | 26 | 281 | 1.38e-54 | 183 |
Find 133 sgRNAs with CRISPR-Local
Find 366 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGGATTGGTGAAACAGAATT+TGG | 0.182173 | 1_2:+70862899 | Msa0089390:five_prime_UTR |
| CAGAGAGTTGGTTGTTGTTT+GGG | 0.186644 | 1_2:-70863009 | None:intergenic |
| TTGCCTTTGTTGATGGCTTA+TGG | 0.191042 | 1_2:+70868138 | Msa0089390:CDS |
| TTATATTACATTCATCTTAA+TGG | 0.199327 | 1_2:-70868364 | None:intergenic |
| CAGATCATTGCCTTTGTTGA+TGG | 0.268391 | 1_2:+70868131 | Msa0089390:CDS |
| ACCTTCTCCAAGTACGATTA+TGG | 0.280197 | 1_2:+70868042 | Msa0089390:CDS |
| ACAAAGGATGGTTTCTTGTT+AGG | 0.282718 | 1_2:+70863193 | Msa0089390:CDS |
| ACAGAGAGTTGGTTGTTGTT+TGG | 0.284882 | 1_2:-70863010 | None:intergenic |
| TGCCTTTGTTGATGGCTTAT+GGG | 0.286118 | 1_2:+70868139 | Msa0089390:CDS |
| ATATGATCCAAGTATGAAAT+TGG | 0.303318 | 1_2:-70865541 | None:intergenic |
| TTCACCAATCCTATTATTGA+TGG | 0.307707 | 1_2:-70862888 | None:intergenic |
| CCTCTTATCATTCAATGGTT+TGG | 0.307944 | 1_2:-70868542 | None:intergenic |
| GCTTCTCCATGGCCTATTCA+TGG | 0.309670 | 1_2:+70863303 | Msa0089390:CDS |
| CCATCATCACCATCAATAAT+AGG | 0.311385 | 1_2:+70862879 | Msa0089390:five_prime_UTR |
| ATGCGGCTAAGGTCAAATTT+TGG | 0.319645 | 1_2:-70868105 | None:intergenic |
| CCAAACCATTGAATGATAAG+AGG | 0.331508 | 1_2:+70868542 | Msa0089390:three_prime_UTR |
| TTGGTTTGCTACTAATTGAT+TGG | 0.341793 | 1_2:+70868485 | Msa0089390:three_prime_UTR |
| TCTGTCTCCAATTTCATACT+TGG | 0.350785 | 1_2:+70865534 | Msa0089390:CDS |
| TCCCTCCAACGCGCCTCAAT+TGG | 0.356861 | 1_2:-70862799 | None:intergenic |
| GGATTGGTGAAACAGAATTT+GGG | 0.356943 | 1_2:+70862900 | Msa0089390:five_prime_UTR |
| TTGAAGTTAAAACCATTGTT+TGG | 0.360541 | 1_2:+70868508 | Msa0089390:three_prime_UTR |
| ATCAGTTTCTTCAAGTCAAT+GGG | 0.364667 | 1_2:+70868309 | Msa0089390:CDS |
| CATCAGTTTCTTCAAGTCAA+TGG | 0.364835 | 1_2:+70868308 | Msa0089390:CDS |
| AACTCAAAGTTATTTGTAGT+TGG | 0.368834 | 1_2:+70865346 | Msa0089390:CDS |
| GGATCATATTAGTGCACCTT+TGG | 0.375065 | 1_2:+70865555 | Msa0089390:CDS |
| TGCACCTTTGGTACTAAGAA+TGG | 0.380394 | 1_2:+70865567 | Msa0089390:CDS |
| CACAGAAGTATTTACTGTCT+TGG | 0.380650 | 1_2:+70868466 | Msa0089390:three_prime_UTR |
| GCAAAGAAAATAGTATATAA+AGG | 0.402286 | 1_2:-70868641 | None:intergenic |
| ACTCAAAGTTATTTGTAGTT+GGG | 0.404963 | 1_2:+70865347 | Msa0089390:CDS |
| TGTAATCTAATTTATACTCT+CGG | 0.413411 | 1_2:-70862839 | None:intergenic |
| ATCTTTATCAGAGAAGAATA+AGG | 0.417364 | 1_2:+70864181 | Msa0089390:CDS |
| ACATAAGGAAATCAAGAGAT+TGG | 0.417842 | 1_2:-70865857 | None:intergenic |
| GACATGCTGTCATCCATTAC+AGG | 0.418206 | 1_2:+70865901 | Msa0089390:CDS |
| GTGGTTTATCTTGAAAACTA+TGG | 0.418535 | 1_2:+70868231 | Msa0089390:CDS |
| AGTAAGTAGTAACCATGAAT+AGG | 0.420033 | 1_2:-70863315 | None:intergenic |
| AAATACACCAGAACAATCAT+TGG | 0.421081 | 1_2:+70864082 | Msa0089390:CDS |
| ACCACCTAACAGTTAGTATA+GGG | 0.423146 | 1_2:+70862754 | Msa0089390:five_prime_UTR |
| AAGCTTTCCATAATCGTACT+TGG | 0.430219 | 1_2:-70868049 | None:intergenic |
| GTAATCTAATTTATACTCTC+GGG | 0.443767 | 1_2:-70862838 | None:intergenic |
| GGAAAAGATGCACATTGATC+AGG | 0.447013 | 1_2:+70865588 | Msa0089390:CDS |
| GGGTGCGCTGCCGCCGTCGA+AGG | 0.448632 | 1_2:-70862986 | None:intergenic |
| CATCAACAAAGGCAATGATC+TGG | 0.449214 | 1_2:-70868130 | None:intergenic |
| GGCTTCATCCTTGCGGATCA+AGG | 0.449610 | 1_2:+70864104 | Msa0089390:CDS |
| TTCATCAGCTGAATTTCAAA+AGG | 0.450695 | 1_2:+70865714 | Msa0089390:CDS |
| AGTGATATATACTCACAGTA+TGG | 0.454131 | 1_2:-70868669 | None:intergenic |
| GTTTCCGAAGGATAAGAGTA+TGG | 0.460626 | 1_2:-70862953 | None:intergenic |
| AACCACCTAACAGTTAGTAT+AGG | 0.469571 | 1_2:+70862753 | Msa0089390:five_prime_UTR |
| GACTTGAAGAAACTGATGAT+AGG | 0.472607 | 1_2:-70868303 | None:intergenic |
| AGAGAGTTGGTTGTTGTTTG+GGG | 0.478775 | 1_2:-70863008 | None:intergenic |
| ATGAAGCCCAATGATTGTTC+TGG | 0.479529 | 1_2:-70864089 | None:intergenic |
| AGGCCATGGAGAAGCAGAAC+CGG | 0.486022 | 1_2:-70863295 | None:intergenic |
| CGCCAATTGAGGCGCGTTGG+AGG | 0.487082 | 1_2:+70862797 | Msa0089390:five_prime_UTR |
| GCCTTTGTTGATGGCTTATG+GGG | 0.492263 | 1_2:+70868140 | Msa0089390:CDS |
| ATGATCTGGGTATGCGGCTA+AGG | 0.493826 | 1_2:-70868116 | None:intergenic |
| ACCACCCTATACTAACTGTT+AGG | 0.495556 | 1_2:-70862758 | None:intergenic |
| TCATTTCCGCAAGATCGTAC+AGG | 0.501400 | 1_2:-70865300 | None:intergenic |
| ATTTGTAGTTGGGCATTCAC+AGG | 0.502438 | 1_2:+70865357 | Msa0089390:CDS |
| ATCACCATCAATAATAGGAT+TGG | 0.503513 | 1_2:+70862884 | Msa0089390:five_prime_UTR |
| CATGGAACATACTCTGGAAA+AGG | 0.507066 | 1_2:-70866970 | None:intergenic |
| ATTGCCATACTCTTATCCTT+CGG | 0.509142 | 1_2:+70862949 | Msa0089390:CDS |
| CCTCCGGTTCTGCTTCTCCA+TGG | 0.509579 | 1_2:+70863292 | Msa0089390:CDS |
| ATTGAGGCGCGTTGGAGGGA+TGG | 0.511191 | 1_2:+70862802 | Msa0089390:five_prime_UTR |
| ATATACTCACAGTATGGTAA+TGG | 0.514581 | 1_2:-70868663 | None:intergenic |
| TTACTTTCAGATTGAAACAA+AGG | 0.517112 | 1_2:+70863177 | Msa0089390:intron |
| TCAACCGGATATAGTAGAAA+AGG | 0.520659 | 1_2:+70865495 | Msa0089390:CDS |
| TGTTCAGATGATTGCTACAA+TGG | 0.521008 | 1_2:+70865688 | Msa0089390:intron |
| TACAGAACACGCGCCAATTG+AGG | 0.522614 | 1_2:+70862786 | Msa0089390:five_prime_UTR |
| CCTATTATTGATGGTGATGA+TGG | 0.523869 | 1_2:-70862879 | None:intergenic |
| GTTCAGATGATTGCTACAAT+GGG | 0.525033 | 1_2:+70865689 | Msa0089390:intron |
| CTCTCAGTGAAGATGTAGAA+AGG | 0.527326 | 1_2:+70868579 | Msa0089390:three_prime_UTR |
| CAGTGAAGATGTAGAAAGGA+TGG | 0.528452 | 1_2:+70868583 | Msa0089390:three_prime_UTR |
| CTGATAAAGATTTATGTCCA+TGG | 0.529374 | 1_2:-70864169 | None:intergenic |
| TGAGAGACATGAACCTGTAA+TGG | 0.530576 | 1_2:-70865914 | None:intergenic |
| ACAACAACAACGAGGTCCTC+CGG | 0.531545 | 1_2:+70863276 | Msa0089390:CDS |
| TACTATATCCGGTTGAGTGA+AGG | 0.532690 | 1_2:-70865488 | None:intergenic |
| ATCAACAAAGGCAATGATCT+GGG | 0.532780 | 1_2:-70868129 | None:intergenic |
| AGAGTTGGTTGTTGTTTGGG+GGG | 0.532934 | 1_2:-70863006 | None:intergenic |
| ACTTGAAGAAACTGATGATA+GGG | 0.535072 | 1_2:-70868302 | None:intergenic |
| GCAGTTCCTTGAGTGTGTGC+TGG | 0.538191 | 1_2:-70868194 | None:intergenic |
| GCCAATTGAGGCGCGTTGGA+GGG | 0.538477 | 1_2:+70862798 | Msa0089390:five_prime_UTR |
| TCCATAATCGTACTTGGAGA+AGG | 0.540057 | 1_2:-70868043 | None:intergenic |
| AATACACCAGAACAATCATT+GGG | 0.543527 | 1_2:+70864083 | Msa0089390:CDS |
| TTACCCTTGCTCTGAATATG+TGG | 0.550867 | 1_2:+70863056 | Msa0089390:CDS |
| ATGAGTTCATCACAGAGAGT+TGG | 0.551768 | 1_2:-70863021 | None:intergenic |
| GAGAGTTGGTTGTTGTTTGG+GGG | 0.553474 | 1_2:-70863007 | None:intergenic |
| TTTCAGATTGAAACAAAGGA+TGG | 0.556157 | 1_2:+70863181 | Msa0089390:intron |
| ATTACATTCATCTTAATGGA+AGG | 0.556575 | 1_2:-70868360 | None:intergenic |
| CAAACCATTGAATGATAAGA+GGG | 0.556879 | 1_2:+70868543 | Msa0089390:three_prime_UTR |
| ACTTAGACGAGTATCACATA+AGG | 0.561077 | 1_2:-70865872 | None:intergenic |
| GGAGTGCACCACTGATATGA+AGG | 0.565592 | 1_2:+70868604 | Msa0089390:three_prime_UTR |
| CAAGACAGTAAATACTTCTG+TGG | 0.566209 | 1_2:-70868465 | None:intergenic |
| ACGCGCCAATTGAGGCGCGT+TGG | 0.567288 | 1_2:+70862794 | Msa0089390:five_prime_UTR |
| ATCATTGGGCTTCATCCTTG+CGG | 0.568286 | 1_2:+70864097 | Msa0089390:CDS |
| TAGATTCATTAAACATACAG+TGG | 0.569806 | 1_2:+70868394 | Msa0089390:three_prime_UTR |
| TAGTAACCATGAATAGGCCA+TGG | 0.571896 | 1_2:-70863309 | None:intergenic |
| TAAACCACCTCAGGTGTGGA+TGG | 0.574032 | 1_2:-70868216 | None:intergenic |
| CGTGGAACACGTTGGAGCCA+TGG | 0.574865 | 1_2:+70864152 | Msa0089390:CDS |
| CATTTCCGCAAGATCGTACA+GGG | 0.575973 | 1_2:-70865299 | None:intergenic |
| GATGAACTCATTCTTCCCGC+TGG | 0.577409 | 1_2:+70863033 | Msa0089390:CDS |
| AGTAATAACCTTCATATCAG+TGG | 0.583808 | 1_2:-70868612 | None:intergenic |
| ACTTGGAGAAGGTACCTTTG+CGG | 0.586271 | 1_2:-70868032 | None:intergenic |
| AATACCACATATTCAGAGCA+AGG | 0.587448 | 1_2:-70863060 | None:intergenic |
| AAGATAAACCACCTCAGGTG+TGG | 0.587694 | 1_2:-70868220 | None:intergenic |
| TCAGAGCAAGGGTAACCAGC+GGG | 0.589366 | 1_2:-70863048 | None:intergenic |
| ATTAGCCCTGTACGATCTTG+CGG | 0.594612 | 1_2:+70865294 | Msa0089390:CDS |
| GTATATATCACTAATTATTG+AGG | 0.599896 | 1_2:+70868680 | Msa0089390:three_prime_UTR |
| TTGCTTCAACGAGTCACGCG+TGG | 0.604439 | 1_2:+70866895 | Msa0089390:CDS |
| GATTGGTGAAACAGAATTTG+GGG | 0.607741 | 1_2:+70862901 | Msa0089390:five_prime_UTR |
| ACAATCAGGCAGGTGATGCA+TGG | 0.608662 | 1_2:+70864054 | Msa0089390:intron |
| AAGACAGTAAATACTTCTGT+GGG | 0.608764 | 1_2:-70868464 | None:intergenic |
| AACATCGCTCACTCCTTCGA+CGG | 0.610140 | 1_2:+70862973 | Msa0089390:CDS |
| ATCGCTCACTCCTTCGACGG+CGG | 0.610445 | 1_2:+70862976 | Msa0089390:CDS |
| TGATTTCCAGCACACACTCA+AGG | 0.617911 | 1_2:+70868188 | Msa0089390:CDS |
| ACCCTATACTAACTGTTAGG+TGG | 0.624266 | 1_2:-70862755 | None:intergenic |
| GGAACATACTCTGGAAAAGG+TGG | 0.634034 | 1_2:-70866967 | None:intergenic |
| ACTGCCATCCACACCTGAGG+TGG | 0.635259 | 1_2:+70868212 | Msa0089390:CDS |
| AAGGCAATGATCTGGGTATG+CGG | 0.641163 | 1_2:-70868122 | None:intergenic |
| CATCAAAACCTTGATCCGCA+AGG | 0.641366 | 1_2:-70864112 | None:intergenic |
| TTACAGACACAACATCAAAG+TGG | 0.645873 | 1_2:-70868424 | None:intergenic |
| AGACACAACATCAAAGTGGA+CGG | 0.649083 | 1_2:-70868420 | None:intergenic |
| TGTTCTCCAGTGATCCGCAA+AGG | 0.657082 | 1_2:+70868018 | Msa0089390:intron |
| ATACCACATATTCAGAGCAA+GGG | 0.659010 | 1_2:-70863059 | None:intergenic |
| ACCTAACAGTTAGTATAGGG+TGG | 0.661356 | 1_2:+70862757 | Msa0089390:five_prime_UTR |
| CCTTTGTTGATGGCTTATGG+GGG | 0.663104 | 1_2:+70868141 | Msa0089390:CDS |
| GGAGTGAGCGATGTTTCCGA+AGG | 0.667016 | 1_2:-70862965 | None:intergenic |
| GGAACTGCCATCCACACCTG+AGG | 0.674091 | 1_2:+70868209 | Msa0089390:CDS |
| ATTATTGATGGTGATGATGG+TGG | 0.675186 | 1_2:-70862876 | None:intergenic |
| TTCAGAGCAAGGGTAACCAG+CGG | 0.686767 | 1_2:-70863049 | None:intergenic |
| ATTGGTGAAACAGAATTTGG+GGG | 0.689686 | 1_2:+70862902 | Msa0089390:five_prime_UTR |
| CCATGGAGAAGCAGAACCGG+AGG | 0.690082 | 1_2:-70863292 | None:intergenic |
| TCAGTTTCTTCAAGTCAATG+GGG | 0.699933 | 1_2:+70868310 | Msa0089390:CDS |
| GAAATGTGCGTGGAACACGT+TGG | 0.739556 | 1_2:+70864144 | Msa0089390:CDS |
| GTTTGGGTAGGAAATGTGCG+TGG | 0.748523 | 1_2:+70864134 | Msa0089390:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTTTTTACATCAATAAT+GGG | - | chr1_2:70866220-70866239 | None:intergenic | 10.0% |
| !!! | TATATTTTTTACATCAATAA+TGG | - | chr1_2:70866221-70866240 | None:intergenic | 10.0% |
| !! | ATTATTGATGTAAAAAATAT+AGG | + | chr1_2:70866220-70866239 | Msa0089390:intron | 10.0% |
| !!! | AGAAAAAAACAATTTTATTT+AGG | + | chr1_2:70866607-70866626 | Msa0089390:intron | 10.0% |
| !! | AATGAAAAGTTATTTATGTT+TGG | - | chr1_2:70863764-70863783 | None:intergenic | 15.0% |
| !!! | AATTAGTTTCAAACTTTAAA+AGG | - | chr1_2:70863988-70864007 | None:intergenic | 15.0% |
| !!! | TTCTTTTCAATTGTAAAATA+TGG | + | chr1_2:70864278-70864297 | Msa0089390:intron | 15.0% |
| !!! | TCTTTTCAATTGTAAAATAT+GGG | + | chr1_2:70864279-70864298 | Msa0089390:intron | 15.0% |
| !!! | TTTTATTTTGGTAAAAATGA+GGG | - | chr1_2:70865209-70865228 | None:intergenic | 15.0% |
| !! | ATAAATTAATATATGTGTAG+CGG | - | chr1_2:70866255-70866274 | None:intergenic | 15.0% |
| !! | ATGACATTAAATTAAATTAC+AGG | + | chr1_2:70866863-70866882 | Msa0089390:intron | 15.0% |
| !! | TCTATTTATAAATTGCTAAA+AGG | + | chr1_2:70867857-70867876 | Msa0089390:intron | 15.0% |
| !! | TTATATTACATTCATCTTAA+TGG | - | chr1_2:70868367-70868386 | None:intergenic | 15.0% |
| !! | TGTAATCTAATTTATACTCT+CGG | - | chr1_2:70862842-70862861 | None:intergenic | 20.0% |
| !! | AAGATATGAATTAGAAAGAA+GGG | - | chr1_2:70863118-70863137 | None:intergenic | 20.0% |
| !! | AAAGATATGAATTAGAAAGA+AGG | - | chr1_2:70863119-70863138 | None:intergenic | 20.0% |
| !! | CATAGTGTATTAGTATAATA+AGG | + | chr1_2:70863488-70863507 | Msa0089390:intron | 20.0% |
| !!! | TCAATTTAGAATCATTTATG+AGG | - | chr1_2:70863663-70863682 | None:intergenic | 20.0% |
| !! | TTAAAAATTCACTTTGTATG+CGG | + | chr1_2:70863888-70863907 | Msa0089390:intron | 20.0% |
| !!! | ACTATATTCTGTCATTTTTT+AGG | + | chr1_2:70863919-70863938 | Msa0089390:intron | 20.0% |
| !!! | CTATATTCTGTCATTTTTTA+GGG | + | chr1_2:70863920-70863939 | Msa0089390:intron | 20.0% |
| !!! | TATATTCTGTCATTTTTTAG+GGG | + | chr1_2:70863921-70863940 | Msa0089390:intron | 20.0% |
| !!! | AAATTCATTTTGCAATTTTG+TGG | - | chr1_2:70864355-70864374 | None:intergenic | 20.0% |
| !!! | TAATATTTGTACAACCATTT+TGG | + | chr1_2:70864458-70864477 | Msa0089390:intron | 20.0% |
| !!! | AATATTTGTACAACCATTTT+GGG | + | chr1_2:70864459-70864478 | Msa0089390:intron | 20.0% |
| !!! | TACAAGTTCTAAATGTATTA+AGG | + | chr1_2:70864672-70864691 | Msa0089390:intron | 20.0% |
| !!! | ACAAGTTCTAAATGTATTAA+GGG | + | chr1_2:70864673-70864692 | Msa0089390:intron | 20.0% |
| !!! | TATATTTTTGAGTTTTGACA+CGG | + | chr1_2:70864759-70864778 | Msa0089390:intron | 20.0% |
| !!! | TTTTTAGCTGTATATTGATA+AGG | + | chr1_2:70865061-70865080 | Msa0089390:intron | 20.0% |
| !!! | TTTATTTTGGTAAAAATGAG+GGG | - | chr1_2:70865208-70865227 | None:intergenic | 20.0% |
| !!! | GTTTTATTTTGGTAAAAATG+AGG | - | chr1_2:70865210-70865229 | None:intergenic | 20.0% |
| !!! | ATTATGAGAAGAGTATTATT+TGG | - | chr1_2:70866050-70866069 | None:intergenic | 20.0% |
| !! | GATAGTAGAAGAATAAATAA+AGG | - | chr1_2:70866382-70866401 | None:intergenic | 20.0% |
| !!! | TTGAGAAATTTTGATCAATT+GGG | - | chr1_2:70866449-70866468 | None:intergenic | 20.0% |
| !!! | CTCATTTTAATCTATAACTT+AGG | + | chr1_2:70866758-70866777 | Msa0089390:intron | 20.0% |
| !! | ATTTAAAAGATATGCATTGT+CGG | - | chr1_2:70867502-70867521 | None:intergenic | 20.0% |
| !! | GCAAAGAAAATAGTATATAA+AGG | - | chr1_2:70868644-70868663 | None:intergenic | 20.0% |
| !! | GTATATATCACTAATTATTG+AGG | + | chr1_2:70868680-70868699 | Msa0089390:three_prime_UTR | 20.0% |
| ! | GTAATCTAATTTATACTCTC+GGG | - | chr1_2:70862841-70862860 | None:intergenic | 25.0% |
| ! | ATTAGAAAGAAGGGAAATAT+TGG | - | chr1_2:70863109-70863128 | None:intergenic | 25.0% |
| !!! | TTTCTGTTTTTCTTGCTAAT+TGG | + | chr1_2:70863136-70863155 | Msa0089390:intron | 25.0% |
| ! | TTACTTTCAGATTGAAACAA+AGG | + | chr1_2:70863177-70863196 | Msa0089390:intron | 25.0% |
| ! | GGGTTTAACAATAAATTCAA+TGG | - | chr1_2:70863724-70863743 | None:intergenic | 25.0% |
| ! | TGGATATATTCATGTAAACA+GGG | - | chr1_2:70863744-70863763 | None:intergenic | 25.0% |
| ! | TTGGATATATTCATGTAAAC+AGG | - | chr1_2:70863745-70863764 | None:intergenic | 25.0% |
| ! | ATCTTTATCAGAGAAGAATA+AGG | + | chr1_2:70864181-70864200 | Msa0089390:CDS | 25.0% |
| ! | ATGTTATAGAACTCATTGAA+TGG | + | chr1_2:70864226-70864245 | Msa0089390:intron | 25.0% |
| !!! | ACCTTTTTTTCTCTTCTTTT+GGG | - | chr1_2:70864597-70864616 | None:intergenic | 25.0% |
| !!! | AACCTTTTTTTCTCTTCTTT+TGG | - | chr1_2:70864598-70864617 | None:intergenic | 25.0% |
| ! | CAAATAAGAAATGCTTCATT+CGG | + | chr1_2:70864991-70865010 | Msa0089390:intron | 25.0% |
| !!! | CATACTCATCAGTTTTATTT+TGG | - | chr1_2:70865221-70865240 | None:intergenic | 25.0% |
| ! | AACTCAAAGTTATTTGTAGT+TGG | + | chr1_2:70865346-70865365 | Msa0089390:CDS | 25.0% |
| ! | ACTCAAAGTTATTTGTAGTT+GGG | + | chr1_2:70865347-70865366 | Msa0089390:CDS | 25.0% |
| !! | ATTTTCCATAGCTTACATTT+TGG | + | chr1_2:70865423-70865442 | Msa0089390:intron | 25.0% |
| ! | ATATGATCCAAGTATGAAAT+TGG | - | chr1_2:70865544-70865563 | None:intergenic | 25.0% |
| ! | ATCAACATATGCAAAAGAAA+AGG | - | chr1_2:70865769-70865788 | None:intergenic | 25.0% |
| ! | TAAATAAAGGTCAGATACTA+TGG | - | chr1_2:70866369-70866388 | None:intergenic | 25.0% |
| !!! | TGAGAAATTTTGATCAATTG+GGG | - | chr1_2:70866448-70866467 | None:intergenic | 25.0% |
| !!! | GTTGAGAAATTTTGATCAAT+TGG | - | chr1_2:70866450-70866469 | None:intergenic | 25.0% |
| ! | ATATGTAACTCTTGTATCTA+CGG | + | chr1_2:70866472-70866491 | Msa0089390:intron | 25.0% |
| !!! | AAACATTTTTTTCTCTCTCT+TGG | - | chr1_2:70866507-70866526 | None:intergenic | 25.0% |
| !!! | AACAATTTTATTTAGGACAC+TGG | + | chr1_2:70866614-70866633 | Msa0089390:intron | 25.0% |
| ! | GTTATAGATTAAAATGAGAG+AGG | - | chr1_2:70866756-70866775 | None:intergenic | 25.0% |
| ! | AAGAAACCAATTAAAGATGA+TGG | - | chr1_2:70866998-70867017 | None:intergenic | 25.0% |
| ! | ACATTATCAAACATGATCAA+AGG | - | chr1_2:70867161-70867180 | None:intergenic | 25.0% |
| ! | ACGATATAGAATAAACAAAC+TGG | - | chr1_2:70867321-70867340 | None:intergenic | 25.0% |
| ! | TGTAAAACTAATTACTAAGG+TGG | - | chr1_2:70867355-70867374 | None:intergenic | 25.0% |
| ! | CAGTGTAAAACTAATTACTA+AGG | - | chr1_2:70867358-70867377 | None:intergenic | 25.0% |
| ! | TCAAGATGCAGTTATTAAAA+TGG | + | chr1_2:70867423-70867442 | Msa0089390:intron | 25.0% |
| ! | CAAGATGCAGTTATTAAAAT+GGG | + | chr1_2:70867424-70867443 | Msa0089390:intron | 25.0% |
| ! | AAGATGCAGTTATTAAAATG+GGG | + | chr1_2:70867425-70867444 | Msa0089390:intron | 25.0% |
| ! | ATCCTTACAAATATGTCTTT+AGG | + | chr1_2:70867520-70867539 | Msa0089390:intron | 25.0% |
| ! | TTTCCTATAATGTCATTACT+AGG | + | chr1_2:70867564-70867583 | Msa0089390:intron | 25.0% |
| !!! | TTTTACTGTGTTATTTGCTT+TGG | + | chr1_2:70867903-70867922 | Msa0089390:intron | 25.0% |
| ! | CTTAAAAATCTGATAGAGTA+TGG | + | chr1_2:70868069-70868088 | Msa0089390:CDS | 25.0% |
| ! | ATTACATTCATCTTAATGGA+AGG | - | chr1_2:70868363-70868382 | None:intergenic | 25.0% |
| ! | TAGATTCATTAAACATACAG+TGG | + | chr1_2:70868394-70868413 | Msa0089390:three_prime_UTR | 25.0% |
| ! | TTGAAGTTAAAACCATTGTT+TGG | + | chr1_2:70868508-70868527 | Msa0089390:three_prime_UTR | 25.0% |
| !!! | GAATCTATTTTTCCAAACAA+TGG | - | chr1_2:70868523-70868542 | None:intergenic | 25.0% |
| ATCACCATCAATAATAGGAT+TGG | + | chr1_2:70862884-70862903 | Msa0089390:five_prime_UTR | 30.0% | |
| TTCACCAATCCTATTATTGA+TGG | - | chr1_2:70862891-70862910 | None:intergenic | 30.0% | |
| TTTCAGATTGAAACAAAGGA+TGG | + | chr1_2:70863181-70863200 | Msa0089390:intron | 30.0% | |
| AGTAAGTAGTAACCATGAAT+AGG | - | chr1_2:70863318-70863337 | None:intergenic | 30.0% | |
| ! | ATATCTTGCTACTTCAATGT+GGG | + | chr1_2:70863516-70863535 | Msa0089390:intron | 30.0% |
| TAGAACCAAACATACACTAA+AGG | - | chr1_2:70863568-70863587 | None:intergenic | 30.0% | |
| !!! | TGTATGTTTGGTTCTACTTT+TGG | + | chr1_2:70863572-70863591 | Msa0089390:intron | 30.0% |
| !! | GAATTTGTTATTGACCTGTT+TGG | + | chr1_2:70863623-70863642 | Msa0089390:intron | 30.0% |
| CAAAACTCTGCAAATATTAC+TGG | - | chr1_2:70863849-70863868 | None:intergenic | 30.0% | |
| ! | CAGTAATATTTGCAGAGTTT+TGG | + | chr1_2:70863847-70863866 | Msa0089390:intron | 30.0% |
| ! | TTATGCCATTTGATACAATC+AGG | + | chr1_2:70864040-70864059 | Msa0089390:intron | 30.0% |
| AAATACACCAGAACAATCAT+TGG | + | chr1_2:70864082-70864101 | Msa0089390:CDS | 30.0% | |
| AATACACCAGAACAATCATT+GGG | + | chr1_2:70864083-70864102 | Msa0089390:CDS | 30.0% | |
| CTGATAAAGATTTATGTCCA+TGG | - | chr1_2:70864172-70864191 | None:intergenic | 30.0% | |
| CAATGAGTTCTATAACATGA+AGG | - | chr1_2:70864224-70864243 | None:intergenic | 30.0% | |
| ! | TACTTTTCTATACATAGCCA+AGG | + | chr1_2:70864324-70864343 | Msa0089390:intron | 30.0% |
| ! | ACTTTTCTATACATAGCCAA+GGG | + | chr1_2:70864325-70864344 | Msa0089390:intron | 30.0% |
| TCAACAACTAAACTTTCATG+TGG | + | chr1_2:70864408-70864427 | Msa0089390:intron | 30.0% | |
| AAACAATAGAGAGAGAAAGA+GGG | - | chr1_2:70864570-70864589 | None:intergenic | 30.0% | |
| AAAACAATAGAGAGAGAAAG+AGG | - | chr1_2:70864571-70864590 | None:intergenic | 30.0% | |
| TCCCAAAAGAAGAGAAAAAA+AGG | + | chr1_2:70864593-70864612 | Msa0089390:intron | 30.0% | |
| !! | GCTATTTTGTGACAACTTTT+GGG | - | chr1_2:70864623-70864642 | None:intergenic | 30.0% |
| !! | AGCTATTTTGTGACAACTTT+TGG | - | chr1_2:70864624-70864643 | None:intergenic | 30.0% |
| ACCTCATTTCTATTAGCAAA+TGG | - | chr1_2:70864708-70864727 | None:intergenic | 30.0% | |
| !! | AACTTGTTGAAAACATTCAG+AGG | - | chr1_2:70864787-70864806 | None:intergenic | 30.0% |
| TTGAACAGAATGAACAAAGA+AGG | + | chr1_2:70864882-70864901 | Msa0089390:intron | 30.0% | |
| AGTACTTCTTATAAGATCAG+AGG | - | chr1_2:70864938-70864957 | None:intergenic | 30.0% | |
| TACTTATGATGATCTCGAAA+AGG | + | chr1_2:70864954-70864973 | Msa0089390:intron | 30.0% | |
| ACTTATGATGATCTCGAAAA+GGG | + | chr1_2:70864955-70864974 | Msa0089390:intron | 30.0% | |
| ATGTGAAAAGGATGATTTAC+AGG | - | chr1_2:70865394-70865413 | None:intergenic | 30.0% | |
| TGTTTCCAAAATGTAAGCTA+TGG | - | chr1_2:70865431-70865450 | None:intergenic | 30.0% | |
| ! | TCAACCTTTTCTACTATATC+CGG | - | chr1_2:70865502-70865521 | None:intergenic | 30.0% |
| ! | TTTTCCATTCTTAGTACCAA+AGG | - | chr1_2:70865574-70865593 | None:intergenic | 30.0% |
| TTCATCAGCTGAATTTCAAA+AGG | + | chr1_2:70865714-70865733 | Msa0089390:CDS | 30.0% | |
| CAAAAGAAAAGGAGAAAAAC+AGG | - | chr1_2:70865758-70865777 | None:intergenic | 30.0% | |
| ! | TTAACTCATTTTCAGCGATT+GGG | + | chr1_2:70865831-70865850 | Msa0089390:intron | 30.0% |
| ACATAAGGAAATCAAGAGAT+TGG | - | chr1_2:70865860-70865879 | None:intergenic | 30.0% | |
| TATGTATGTCTGTGTTTAGA+AGG | + | chr1_2:70865948-70865967 | Msa0089390:intron | 30.0% | |
| !! | GAGAAGAGTATTATTTGGAT+TGG | - | chr1_2:70866045-70866064 | None:intergenic | 30.0% |
| !! | AGAAATTTTGATCAATTGGG+GGG | - | chr1_2:70866446-70866465 | None:intergenic | 30.0% |
| !! | GAGAAATTTTGATCAATTGG+GGG | - | chr1_2:70866447-70866466 | None:intergenic | 30.0% |
| ! | AAGGTTTTTGAATCATGCTT+AGG | - | chr1_2:70866733-70866752 | None:intergenic | 30.0% |
| TAGATTAAAATGAGAGAGGA+AGG | - | chr1_2:70866752-70866771 | None:intergenic | 30.0% | |
| ! | CTATAACTTAGGAATCCTTT+TGG | + | chr1_2:70866769-70866788 | Msa0089390:intron | 30.0% |
| !! | CAATTAAAGATGATGGAACA+TGG | - | chr1_2:70866991-70867010 | None:intergenic | 30.0% |
| CATGTTCCATCATCTTTAAT+TGG | + | chr1_2:70866989-70867008 | Msa0089390:intron | 30.0% | |
| GATCAAAGGTAAATTTGTGA+TGG | - | chr1_2:70867147-70867166 | None:intergenic | 30.0% | |
| !! | GATATGAAGCAGCTTTAAAT+TGG | + | chr1_2:70867195-70867214 | Msa0089390:intron | 30.0% |
| !! | AGCTTTAAATTGGACTTTGT+AGG | + | chr1_2:70867205-70867224 | Msa0089390:intron | 30.0% |
| ! | GCTTTAAATTGGACTTTGTA+GGG | + | chr1_2:70867206-70867225 | Msa0089390:intron | 30.0% |
| TAACTGCATCTTGAAATTGA+CGG | - | chr1_2:70867417-70867436 | None:intergenic | 30.0% | |
| CTCCTAAAGACATATTTGTA+AGG | - | chr1_2:70867525-70867544 | None:intergenic | 30.0% | |
| ! | TACAAATATGTCTTTAGGAG+AGG | + | chr1_2:70867525-70867544 | Msa0089390:intron | 30.0% |
| GTACCTAGTAATGACATTAT+AGG | - | chr1_2:70867570-70867589 | None:intergenic | 30.0% | |
| AAGAGAAAAAGAAACTACAG+CGG | - | chr1_2:70867623-70867642 | None:intergenic | 30.0% | |
| CATCATCAACCAGTAATTAA+TGG | - | chr1_2:70867756-70867775 | None:intergenic | 30.0% | |
| !! | TTGATGATGAATCAGCATAT+GGG | + | chr1_2:70867767-70867786 | Msa0089390:intron | 30.0% |
| ATAGAGTTTAAAAGACAGTC+TGG | - | chr1_2:70867842-70867861 | None:intergenic | 30.0% | |
| ! | CTAAAAGGACATTTGAAGTT+TGG | + | chr1_2:70867872-70867891 | Msa0089390:intron | 30.0% |
| ATCATACACAAAATGAAAGC+TGG | - | chr1_2:70867933-70867952 | None:intergenic | 30.0% | |
| ! | AGCTTTCATTTTGTGTATGA+TGG | + | chr1_2:70867932-70867951 | Msa0089390:intron | 30.0% |
| !! | CTTGCTATTATTCTTGTCAA+TGG | + | chr1_2:70867973-70867992 | Msa0089390:intron | 30.0% |
| GTGGTTTATCTTGAAAACTA+TGG | + | chr1_2:70868231-70868250 | Msa0089390:CDS | 30.0% | |
| ACTTGAAGAAACTGATGATA+GGG | - | chr1_2:70868305-70868324 | None:intergenic | 30.0% | |
| ATCAGTTTCTTCAAGTCAAT+GGG | + | chr1_2:70868309-70868328 | Msa0089390:CDS | 30.0% | |
| AAGACAGTAAATACTTCTGT+GGG | - | chr1_2:70868467-70868486 | None:intergenic | 30.0% | |
| !! | TTGGTTTGCTACTAATTGAT+TGG | + | chr1_2:70868485-70868504 | Msa0089390:three_prime_UTR | 30.0% |
| CAAACCATTGAATGATAAGA+GGG | + | chr1_2:70868543-70868562 | Msa0089390:three_prime_UTR | 30.0% | |
| ! | TTTTCCCTCTTATCATTCAA+TGG | - | chr1_2:70868550-70868569 | None:intergenic | 30.0% |
| AGTAATAACCTTCATATCAG+TGG | - | chr1_2:70868615-70868634 | None:intergenic | 30.0% | |
| ATATACTCACAGTATGGTAA+TGG | - | chr1_2:70868666-70868685 | None:intergenic | 30.0% | |
| AGTGATATATACTCACAGTA+TGG | - | chr1_2:70868672-70868691 | None:intergenic | 30.0% | |
| AACCACCTAACAGTTAGTAT+AGG | + | chr1_2:70862753-70862772 | Msa0089390:five_prime_UTR | 35.0% | |
| ACCACCTAACAGTTAGTATA+GGG | + | chr1_2:70862754-70862773 | Msa0089390:five_prime_UTR | 35.0% | |
| !! | ATTATTGATGGTGATGATGG+TGG | - | chr1_2:70862879-70862898 | None:intergenic | 35.0% |
| !! | CCTATTATTGATGGTGATGA+TGG | - | chr1_2:70862882-70862901 | None:intergenic | 35.0% |
| CCATCATCACCATCAATAAT+AGG | + | chr1_2:70862879-70862898 | Msa0089390:five_prime_UTR | 35.0% | |
| ! | AGGATTGGTGAAACAGAATT+TGG | + | chr1_2:70862899-70862918 | Msa0089390:five_prime_UTR | 35.0% |
| ! | GGATTGGTGAAACAGAATTT+GGG | + | chr1_2:70862900-70862919 | Msa0089390:five_prime_UTR | 35.0% |
| GATTGGTGAAACAGAATTTG+GGG | + | chr1_2:70862901-70862920 | Msa0089390:five_prime_UTR | 35.0% | |
| ATTGGTGAAACAGAATTTGG+GGG | + | chr1_2:70862902-70862921 | Msa0089390:five_prime_UTR | 35.0% | |
| ATTGCCATACTCTTATCCTT+CGG | + | chr1_2:70862949-70862968 | Msa0089390:CDS | 35.0% | |
| ATACCACATATTCAGAGCAA+GGG | - | chr1_2:70863062-70863081 | None:intergenic | 35.0% | |
| AATACCACATATTCAGAGCA+AGG | - | chr1_2:70863063-70863082 | None:intergenic | 35.0% | |
| ACAAAGGATGGTTTCTTGTT+AGG | + | chr1_2:70863193-70863212 | Msa0089390:CDS | 35.0% | |
| ! | GATATCTTGCTACTTCAATG+TGG | + | chr1_2:70863515-70863534 | Msa0089390:intron | 35.0% |
| AGCTTCCTTTAGTGTATGTT+TGG | + | chr1_2:70863560-70863579 | Msa0089390:intron | 35.0% | |
| !!! | ATGTTTGGTTCTACTTTTGG+AGG | + | chr1_2:70863575-70863594 | Msa0089390:intron | 35.0% |
| !!! | TGTTTGGTTCTACTTTTGGA+GGG | + | chr1_2:70863576-70863595 | Msa0089390:intron | 35.0% |
| ! | TACATAATTGATTCTCGAGG+TGG | + | chr1_2:70863599-70863618 | Msa0089390:intron | 35.0% |
| ATTGACCTGTTTGGATGTAT+TGG | + | chr1_2:70863632-70863651 | Msa0089390:intron | 35.0% | |
| CAAAACCAATACATCCAAAC+AGG | - | chr1_2:70863640-70863659 | None:intergenic | 35.0% | |
| !! | GTTTTGGACAGTGTTTGAAT+TGG | + | chr1_2:70863863-70863882 | Msa0089390:intron | 35.0% |
| !! | GGATCAAGGTTTTGATGTTT+GGG | + | chr1_2:70864118-70864137 | Msa0089390:CDS | 35.0% |
| TCTCAAAAGTTGTCCCAAAA+TGG | - | chr1_2:70864475-70864494 | None:intergenic | 35.0% | |
| AACAATAGAGAGAGAAAGAG+GGG | - | chr1_2:70864569-70864588 | None:intergenic | 35.0% | |
| ! | GCCATTTGCTAATAGAAATG+AGG | + | chr1_2:70864704-70864723 | Msa0089390:intron | 35.0% |
| ! | TTTTCAGCACCAGTTTGAAA+AGG | + | chr1_2:70864859-70864878 | Msa0089390:intron | 35.0% |
| ! | TCTGTTCAACCTTTTCAAAC+TGG | - | chr1_2:70864871-70864890 | None:intergenic | 35.0% |
| ATTGTTTGATCTTGAGCAGT+TGG | + | chr1_2:70865026-70865045 | Msa0089390:intron | 35.0% | |
| TGACTAGAATTCTTCGACAA+TGG | - | chr1_2:70865116-70865135 | None:intergenic | 35.0% | |
| ! | TTGTCCTTTTGTAGCACTTT+TGG | + | chr1_2:70865254-70865273 | Msa0089390:intron | 35.0% |
| ! | TGTCCTTTTGTAGCACTTTT+GGG | + | chr1_2:70865255-70865274 | Msa0089390:intron | 35.0% |
| !! | AATCCCAAAAGTGCTACAAA+AGG | - | chr1_2:70865261-70865280 | None:intergenic | 35.0% |
| !!! | TTTTGTAGCACTTTTGGGAT+TGG | + | chr1_2:70865260-70865279 | Msa0089390:intron | 35.0% |
| AATGCTGGTAGAATGTGAAA+AGG | - | chr1_2:70865406-70865425 | None:intergenic | 35.0% | |
| ATGTAAGCTATGGAAAATGC+TGG | - | chr1_2:70865421-70865440 | None:intergenic | 35.0% | |
| GAAACATCTTATCCGTCTTA+GGG | + | chr1_2:70865445-70865464 | Msa0089390:intron | 35.0% | |
| AAACATCTTATCCGTCTTAG+GGG | + | chr1_2:70865446-70865465 | Msa0089390:intron | 35.0% | |
| GAAATAATTGTCCCCTAAGA+CGG | - | chr1_2:70865460-70865479 | None:intergenic | 35.0% | |
| TCAACCGGATATAGTAGAAA+AGG | + | chr1_2:70865495-70865514 | Msa0089390:CDS | 35.0% | |
| TCTGTCTCCAATTTCATACT+TGG | + | chr1_2:70865534-70865553 | Msa0089390:CDS | 35.0% | |
| TGTTCAGATGATTGCTACAA+TGG | + | chr1_2:70865688-70865707 | Msa0089390:intron | 35.0% | |
| GTTCAGATGATTGCTACAAT+GGG | + | chr1_2:70865689-70865708 | Msa0089390:intron | 35.0% | |
| TTTGCTAAGCTGGAAATACA+TGG | - | chr1_2:70865792-70865811 | None:intergenic | 35.0% | |
| ! | TCCAGCTTAGCAAATTTTCA+CGG | + | chr1_2:70865798-70865817 | Msa0089390:intron | 35.0% |
| ! | CTTAACTCATTTTCAGCGAT+TGG | + | chr1_2:70865830-70865849 | Msa0089390:intron | 35.0% |
| ACTTAGACGAGTATCACATA+AGG | - | chr1_2:70865875-70865894 | None:intergenic | 35.0% | |
| TGGCATTCATGAAAGACAAA+AGG | - | chr1_2:70866074-70866093 | None:intergenic | 35.0% | |
| TAATATATGTGTAGCGGTGA+TGG | - | chr1_2:70866249-70866268 | None:intergenic | 35.0% | |
| !! | TTCAAGTTTTTGGAGGATGA+TGG | - | chr1_2:70866947-70866966 | None:intergenic | 35.0% |
| !! | GAAAAGGTGGTTCAAGTTTT+TGG | - | chr1_2:70866957-70866976 | None:intergenic | 35.0% |
| ! | TGACTTTTCTGACTATTCAC+TGG | + | chr1_2:70867036-70867055 | Msa0089390:intron | 35.0% |
| TAAATTGGACTTTGTAGGGA+CGG | + | chr1_2:70867210-70867229 | Msa0089390:intron | 35.0% | |
| GGGAAGTAATAATGTTCAGT+GGG | + | chr1_2:70867240-70867259 | Msa0089390:intron | 35.0% | |
| GAATAAACAAACTGGTACCA+AGG | - | chr1_2:70867313-70867332 | None:intergenic | 35.0% | |
| GAAAAATAGAGACCTCTCAT+TGG | - | chr1_2:70867385-70867404 | None:intergenic | 35.0% | |
| TTGAAATTGACGGAATGACA+TGG | - | chr1_2:70867407-70867426 | None:intergenic | 35.0% | |
| ! | AAATATGTCTTTAGGAGAGG+AGG | + | chr1_2:70867528-70867547 | Msa0089390:intron | 35.0% |
| ! | GCTGTAGTTTCTTTTTCTCT+TGG | + | chr1_2:70867622-70867641 | Msa0089390:intron | 35.0% |
| !! | GTTGATGATGAATCAGCATA+TGG | + | chr1_2:70867766-70867785 | Msa0089390:intron | 35.0% |
| ACAGTCTGGTGGAAATAATT+AGG | - | chr1_2:70867828-70867847 | None:intergenic | 35.0% | |
| AAGCTTTCCATAATCGTACT+TGG | - | chr1_2:70868052-70868071 | None:intergenic | 35.0% | |
| ATCAACAAAGGCAATGATCT+GGG | - | chr1_2:70868132-70868151 | None:intergenic | 35.0% | |
| !! | TTTTCAAGATAAACCACCTC+AGG | - | chr1_2:70868228-70868247 | None:intergenic | 35.0% |
| GACTTGAAGAAACTGATGAT+AGG | - | chr1_2:70868306-70868325 | None:intergenic | 35.0% | |
| CATCAGTTTCTTCAAGTCAA+TGG | + | chr1_2:70868308-70868327 | Msa0089390:CDS | 35.0% | |
| TCAGTTTCTTCAAGTCAATG+GGG | + | chr1_2:70868310-70868329 | Msa0089390:CDS | 35.0% | |
| TTACAGACACAACATCAAAG+TGG | - | chr1_2:70868427-70868446 | None:intergenic | 35.0% | |
| CAAGACAGTAAATACTTCTG+TGG | - | chr1_2:70868468-70868487 | None:intergenic | 35.0% | |
| !! | CACAGAAGTATTTACTGTCT+TGG | + | chr1_2:70868466-70868485 | Msa0089390:three_prime_UTR | 35.0% |
| CCTCTTATCATTCAATGGTT+TGG | - | chr1_2:70868545-70868564 | None:intergenic | 35.0% | |
| CCAAACCATTGAATGATAAG+AGG | + | chr1_2:70868542-70868561 | Msa0089390:three_prime_UTR | 35.0% | |
| ACCCTATACTAACTGTTAGG+TGG | - | chr1_2:70862758-70862777 | None:intergenic | 40.0% | |
| ACCTAACAGTTAGTATAGGG+TGG | + | chr1_2:70862757-70862776 | Msa0089390:five_prime_UTR | 40.0% | |
| ACCACCCTATACTAACTGTT+AGG | - | chr1_2:70862761-70862780 | None:intergenic | 40.0% | |
| TGAAACAGAATTTGGGGGAT+GGG | + | chr1_2:70862907-70862926 | Msa0089390:exon | 40.0% | |
| GTTTCCGAAGGATAAGAGTA+TGG | - | chr1_2:70862956-70862975 | None:intergenic | 40.0% | |
| !! | AGAGAGTTGGTTGTTGTTTG+GGG | - | chr1_2:70863011-70863030 | None:intergenic | 40.0% |
| !! | CAGAGAGTTGGTTGTTGTTT+GGG | - | chr1_2:70863012-70863031 | None:intergenic | 40.0% |
| ! | ACAGAGAGTTGGTTGTTGTT+TGG | - | chr1_2:70863013-70863032 | None:intergenic | 40.0% |
| ATGAGTTCATCACAGAGAGT+TGG | - | chr1_2:70863024-70863043 | None:intergenic | 40.0% | |
| ! | TTACCCTTGCTCTGAATATG+TGG | + | chr1_2:70863056-70863075 | Msa0089390:CDS | 40.0% |
| GCTCAAAAACAACAACAACG+AGG | + | chr1_2:70863268-70863287 | Msa0089390:CDS | 40.0% | |
| TAGTAACCATGAATAGGCCA+TGG | - | chr1_2:70863312-70863331 | None:intergenic | 40.0% | |
| ! | ACGTCTTCTATCAGAAGTGT+CGG | - | chr1_2:70863397-70863416 | None:intergenic | 40.0% |
| ATGAAGCACATACACACACA+TGG | - | chr1_2:70863471-70863490 | None:intergenic | 40.0% | |
| ! | GGGTACATAATTGATTCTCG+AGG | + | chr1_2:70863596-70863615 | Msa0089390:intron | 40.0% |
| !!! | CTGTCATTTTTTAGGGGAAG+TGG | + | chr1_2:70863927-70863946 | Msa0089390:intron | 40.0% |
| ACCTGCCTGATTGTATCAAA+TGG | - | chr1_2:70864048-70864067 | None:intergenic | 40.0% | |
| ATGAAGCCCAATGATTGTTC+TGG | - | chr1_2:70864092-70864111 | None:intergenic | 40.0% | |
| !! | CGGATCAAGGTTTTGATGTT+TGG | + | chr1_2:70864117-70864136 | Msa0089390:CDS | 40.0% |
| !! | CAAGGTTTTGATGTTTGGGT+AGG | + | chr1_2:70864122-70864141 | Msa0089390:CDS | 40.0% |
| ! | ATACGATGTGACTTGTGCTT+TGG | + | chr1_2:70865182-70865201 | Msa0089390:intron | 40.0% |
| ATTTGTAGTTGGGCATTCAC+AGG | + | chr1_2:70865357-70865376 | Msa0089390:CDS | 40.0% | |
| GGAAACATCTTATCCGTCTT+AGG | + | chr1_2:70865444-70865463 | Msa0089390:intron | 40.0% | |
| TACTATATCCGGTTGAGTGA+AGG | - | chr1_2:70865491-70865510 | None:intergenic | 40.0% | |
| GGATCATATTAGTGCACCTT+TGG | + | chr1_2:70865555-70865574 | Msa0089390:CDS | 40.0% | |
| TGCACCTTTGGTACTAAGAA+TGG | + | chr1_2:70865567-70865586 | Msa0089390:CDS | 40.0% | |
| GGAAAAGATGCACATTGATC+AGG | + | chr1_2:70865588-70865607 | Msa0089390:CDS | 40.0% | |
| AAACAGGACAGAACGAAAAC+TGG | - | chr1_2:70865742-70865761 | None:intergenic | 40.0% | |
| ! | CCAGCTTAGCAAATTTTCAC+GGG | + | chr1_2:70865799-70865818 | Msa0089390:intron | 40.0% |
| ! | CAGCTTAGCAAATTTTCACG+GGG | + | chr1_2:70865800-70865819 | Msa0089390:intron | 40.0% |
| TGAGAGACATGAACCTGTAA+TGG | - | chr1_2:70865917-70865936 | None:intergenic | 40.0% | |
| TGCCATTGCAATTACTTTGC+TGG | + | chr1_2:70866089-70866108 | Msa0089390:intron | 40.0% | |
| AGCCAGCAAAGTAATTGCAA+TGG | - | chr1_2:70866094-70866113 | None:intergenic | 40.0% | |
| TTTGTCTGAGTTGTCTGACA+TGG | + | chr1_2:70866533-70866552 | Msa0089390:intron | 40.0% | |
| ATGGCTCGTATGAGTGTTAT+AGG | + | chr1_2:70866552-70866571 | Msa0089390:intron | 40.0% | |
| CGTATGAGTGTTATAGGTGT+CGG | + | chr1_2:70866558-70866577 | Msa0089390:intron | 40.0% | |
| CTTAGGCAAGTTATGAAGCA+CGG | - | chr1_2:70866716-70866735 | None:intergenic | 40.0% | |
| ATACACGCAGAATGACCAAA+AGG | - | chr1_2:70866787-70866806 | None:intergenic | 40.0% | |
| !!! | TTTTTGGAGGATGATGGATG+AGG | - | chr1_2:70866941-70866960 | None:intergenic | 40.0% |
| !! | AAGGTGGTTCAAGTTTTTGG+AGG | - | chr1_2:70866954-70866973 | None:intergenic | 40.0% |
| ! | CATGGAACATACTCTGGAAA+AGG | - | chr1_2:70866973-70866992 | None:intergenic | 40.0% |
| ATGGAACATGGAACATACTC+TGG | - | chr1_2:70866979-70866998 | None:intergenic | 40.0% | |
| AAATTGGACTTTGTAGGGAC+GGG | + | chr1_2:70867211-70867230 | Msa0089390:intron | 40.0% | |
| GGGGAAGTAATAATGTTCAG+TGG | + | chr1_2:70867239-70867258 | Msa0089390:intron | 40.0% | |
| TCTCTTCTACATGACAACCT+TGG | + | chr1_2:70867293-70867312 | Msa0089390:intron | 40.0% | |
| TTACACTGACATCCAATGAG+AGG | + | chr1_2:70867370-70867389 | Msa0089390:intron | 40.0% | |
| TGACATGCTTTATCTTGCCA+AGG | + | chr1_2:70867691-70867710 | Msa0089390:intron | 40.0% | |
| CTTCGTACAAATATGCTCCT+TGG | - | chr1_2:70867711-70867730 | None:intergenic | 40.0% | |
| ATGATGAATCAGCATATGGG+TGG | + | chr1_2:70867770-70867789 | Msa0089390:intron | 40.0% | |
| GAGTTTAAAAGACAGTCTGG+TGG | - | chr1_2:70867839-70867858 | None:intergenic | 40.0% | |
| ACCTTCTCCAAGTACGATTA+TGG | + | chr1_2:70868042-70868061 | Msa0089390:CDS | 40.0% | |
| TCCATAATCGTACTTGGAGA+AGG | - | chr1_2:70868046-70868065 | None:intergenic | 40.0% | |
| ! | ATGCGGCTAAGGTCAAATTT+TGG | - | chr1_2:70868108-70868127 | None:intergenic | 40.0% |
| CATCAACAAAGGCAATGATC+TGG | - | chr1_2:70868133-70868152 | None:intergenic | 40.0% | |
| CAGATCATTGCCTTTGTTGA+TGG | + | chr1_2:70868131-70868150 | Msa0089390:CDS | 40.0% | |
| !! | TTGCCTTTGTTGATGGCTTA+TGG | + | chr1_2:70868138-70868157 | Msa0089390:CDS | 40.0% |
| !! | TGCCTTTGTTGATGGCTTAT+GGG | + | chr1_2:70868139-70868158 | Msa0089390:CDS | 40.0% |
| AGACACAACATCAAAGTGGA+CGG | - | chr1_2:70868423-70868442 | None:intergenic | 40.0% | |
| CTCTCAGTGAAGATGTAGAA+AGG | + | chr1_2:70868579-70868598 | Msa0089390:three_prime_UTR | 40.0% | |
| CAGTGAAGATGTAGAAAGGA+TGG | + | chr1_2:70868583-70868602 | Msa0089390:three_prime_UTR | 40.0% | |
| GTGAAACAGAATTTGGGGGA+TGG | + | chr1_2:70862906-70862925 | Msa0089390:exon | 45.0% | |
| GAAACAGAATTTGGGGGATG+GGG | + | chr1_2:70862908-70862927 | Msa0089390:exon | 45.0% | |
| !! | AGAGTTGGTTGTTGTTTGGG+GGG | - | chr1_2:70863009-70863028 | None:intergenic | 45.0% |
| !! | GAGAGTTGGTTGTTGTTTGG+GGG | - | chr1_2:70863010-70863029 | None:intergenic | 45.0% |
| CTTCTGATAGAAGACGTGTC+TGG | + | chr1_2:70863400-70863419 | Msa0089390:intron | 45.0% | |
| GCCATTTGATACAATCAGGC+AGG | + | chr1_2:70864044-70864063 | Msa0089390:intron | 45.0% | |
| ATCATTGGGCTTCATCCTTG+CGG | + | chr1_2:70864097-70864116 | Msa0089390:CDS | 45.0% | |
| CATCAAAACCTTGATCCGCA+AGG | - | chr1_2:70864115-70864134 | None:intergenic | 45.0% | |
| ! | GCAATTTTGTGGAACACCCT+TGG | - | chr1_2:70864344-70864363 | None:intergenic | 45.0% |
| CTCGAAAAGGGAGAACAGAA+TGG | + | chr1_2:70864967-70864986 | Msa0089390:intron | 45.0% | |
| ATTAGCCCTGTACGATCTTG+CGG | + | chr1_2:70865294-70865313 | Msa0089390:CDS | 45.0% | |
| CATTTCCGCAAGATCGTACA+GGG | - | chr1_2:70865302-70865321 | None:intergenic | 45.0% | |
| TCATTTCCGCAAGATCGTAC+AGG | - | chr1_2:70865303-70865322 | None:intergenic | 45.0% | |
| ! | TTTTGCTGCCTTCACTCAAC+CGG | + | chr1_2:70865480-70865499 | Msa0089390:CDS | 45.0% |
| !! | CCCGTGAAAATTTGCTAAGC+TGG | - | chr1_2:70865802-70865821 | None:intergenic | 45.0% |
| GACATGCTGTCATCCATTAC+AGG | + | chr1_2:70865901-70865920 | Msa0089390:CDS | 45.0% | |
| CGCACAATTCAGATCAGAGA+GGG | - | chr1_2:70866191-70866210 | None:intergenic | 45.0% | |
| TTACTTCGACACTCCTAGAC+CGG | - | chr1_2:70866587-70866606 | None:intergenic | 45.0% | |
| ! | GGAACATACTCTGGAAAAGG+TGG | - | chr1_2:70866970-70866989 | None:intergenic | 45.0% |
| !! | GCGCTGTTTTCAATTAGCAG+TGG | + | chr1_2:70867058-70867077 | Msa0089390:intron | 45.0% |
| AATTGGACTTTGTAGGGACG+GGG | + | chr1_2:70867212-70867231 | Msa0089390:intron | 45.0% | |
| AATCAGCATATGGGTGGAAG+TGG | + | chr1_2:70867776-70867795 | Msa0089390:intron | 45.0% | |
| GGATCACTGGAGAACATATG+AGG | - | chr1_2:70868014-70868033 | None:intergenic | 45.0% | |
| !! | ACTTGGAGAAGGTACCTTTG+CGG | - | chr1_2:70868035-70868054 | None:intergenic | 45.0% |
| ! | CGGCTAAGGTCAAATTTTGG+TGG | - | chr1_2:70868105-70868124 | None:intergenic | 45.0% |
| AAGGCAATGATCTGGGTATG+CGG | - | chr1_2:70868125-70868144 | None:intergenic | 45.0% | |
| !! | GCCTTTGTTGATGGCTTATG+GGG | + | chr1_2:70868140-70868159 | Msa0089390:CDS | 45.0% |
| !! | CCTTTGTTGATGGCTTATGG+GGG | + | chr1_2:70868141-70868160 | Msa0089390:CDS | 45.0% |
| TGATTTCCAGCACACACTCA+AGG | + | chr1_2:70868188-70868207 | Msa0089390:CDS | 45.0% | |
| AAGATAAACCACCTCAGGTG+TGG | - | chr1_2:70868223-70868242 | None:intergenic | 45.0% | |
| !! | TATATTAATTTATTTATAGA+CGG | + | chr1_2:70866262-70866281 | Msa0089390:intron | 5.0% |
| TACAGAACACGCGCCAATTG+AGG | + | chr1_2:70862786-70862805 | Msa0089390:five_prime_UTR | 50.0% | |
| AACATCGCTCACTCCTTCGA+CGG | + | chr1_2:70862973-70862992 | Msa0089390:CDS | 50.0% | |
| GATGAACTCATTCTTCCCGC+TGG | + | chr1_2:70863033-70863052 | Msa0089390:CDS | 50.0% | |
| TTCAGAGCAAGGGTAACCAG+CGG | - | chr1_2:70863052-70863071 | None:intergenic | 50.0% | |
| ACAACAACAACGAGGTCCTC+CGG | + | chr1_2:70863276-70863295 | Msa0089390:CDS | 50.0% | |
| GCTTCTCCATGGCCTATTCA+TGG | + | chr1_2:70863303-70863322 | Msa0089390:CDS | 50.0% | |
| ACAATCAGGCAGGTGATGCA+TGG | + | chr1_2:70864054-70864073 | Msa0089390:intron | 50.0% | |
| GTTTGGGTAGGAAATGTGCG+TGG | + | chr1_2:70864134-70864153 | Msa0089390:CDS | 50.0% | |
| GAAATGTGCGTGGAACACGT+TGG | + | chr1_2:70864144-70864163 | Msa0089390:CDS | 50.0% | |
| !!! | AGCACTTTTGGGATTGGAGC+TGG | + | chr1_2:70865266-70865285 | Msa0089390:intron | 50.0% |
| TCAGATCAGAGAGGGTGAGT+AGG | - | chr1_2:70866183-70866202 | None:intergenic | 50.0% | |
| GCGCACAATTCAGATCAGAG+AGG | - | chr1_2:70866192-70866211 | None:intergenic | 50.0% | |
| !! | GTGTTATAGGTGTCGGACAC+CGG | + | chr1_2:70866565-70866584 | Msa0089390:intron | 50.0% |
| ACGTGTCGTACGAGTGTCAT+GGG | + | chr1_2:70866652-70866671 | Msa0089390:intron | 50.0% | |
| TATGAAGCACGGACACCTCT+AGG | - | chr1_2:70866705-70866724 | None:intergenic | 50.0% | |
| ATTGGACTTTGTAGGGACGG+GGG | + | chr1_2:70867213-70867232 | Msa0089390:intron | 50.0% | |
| TGTTCTCCAGTGATCCGCAA+AGG | + | chr1_2:70868018-70868037 | Msa0089390:intron | 50.0% | |
| ! | AAGGTACCTTTGCGGATCAC+TGG | - | chr1_2:70868027-70868046 | None:intergenic | 50.0% |
| ATGATCTGGGTATGCGGCTA+AGG | - | chr1_2:70868119-70868138 | None:intergenic | 50.0% | |
| CCCCCATAAGCCATCAACAA+AGG | - | chr1_2:70868144-70868163 | None:intergenic | 50.0% | |
| TAAACCACCTCAGGTGTGGA+TGG | - | chr1_2:70868219-70868238 | None:intergenic | 50.0% | |
| GGAGTGCACCACTGATATGA+AGG | + | chr1_2:70868604-70868623 | Msa0089390:three_prime_UTR | 50.0% | |
| !! | TTTGGGGGATGGGGAGTGTT+TGG | + | chr1_2:70862917-70862936 | Msa0089390:exon | 55.0% |
| GGAGTGAGCGATGTTTCCGA+AGG | - | chr1_2:70862968-70862987 | None:intergenic | 55.0% | |
| TCAGAGCAAGGGTAACCAGC+GGG | - | chr1_2:70863051-70863070 | None:intergenic | 55.0% | |
| AGGCCATGGAGAAGCAGAAC+CGG | - | chr1_2:70863298-70863317 | None:intergenic | 55.0% | |
| GGCTTCATCCTTGCGGATCA+AGG | + | chr1_2:70864104-70864123 | Msa0089390:CDS | 55.0% | |
| GACACTCGTACGACACGTGT+CGG | - | chr1_2:70866650-70866669 | None:intergenic | 55.0% | |
| CACGTGTCGTACGAGTGTCA+TGG | + | chr1_2:70866651-70866670 | Msa0089390:intron | 55.0% | |
| ! | TACGAGTGTCATGGGAGTGC+CGG | + | chr1_2:70866660-70866679 | Msa0089390:intron | 55.0% |
| TTGCTTCAACGAGTCACGCG+TGG | + | chr1_2:70866895-70866914 | Msa0089390:CDS | 55.0% | |
| ACTTTGTAGGGACGGGGGTT+GGG | + | chr1_2:70867218-70867237 | Msa0089390:intron | 55.0% | |
| GCAGTTCCTTGAGTGTGTGC+TGG | - | chr1_2:70868197-70868216 | None:intergenic | 55.0% | |
| GCCAATTGAGGCGCGTTGGA+GGG | + | chr1_2:70862798-70862817 | Msa0089390:five_prime_UTR | 60.0% | |
| TCCCTCCAACGCGCCTCAAT+TGG | - | chr1_2:70862802-70862821 | None:intergenic | 60.0% | |
| ATTGAGGCGCGTTGGAGGGA+TGG | + | chr1_2:70862802-70862821 | Msa0089390:five_prime_UTR | 60.0% | |
| ATCGCTCACTCCTTCGACGG+CGG | + | chr1_2:70862976-70862995 | Msa0089390:CDS | 60.0% | |
| CCATGGAGAAGCAGAACCGG+AGG | - | chr1_2:70863295-70863314 | None:intergenic | 60.0% | |
| CCTCCGGTTCTGCTTCTCCA+TGG | + | chr1_2:70863292-70863311 | Msa0089390:CDS | 60.0% | |
| CGTGGAACACGTTGGAGCCA+TGG | + | chr1_2:70864152-70864171 | Msa0089390:CDS | 60.0% | |
| !! | TAGGTGTCGGACACCGGTCT+AGG | + | chr1_2:70866571-70866590 | Msa0089390:intron | 60.0% |
| !! | CTCTAGGACTAGGCGTGTCG+CGG | - | chr1_2:70866689-70866708 | None:intergenic | 60.0% |
| !! | GCACGGACACCTCTAGGACT+AGG | - | chr1_2:70866699-70866718 | None:intergenic | 60.0% |
| GACTTTGTAGGGACGGGGGT+TGG | + | chr1_2:70867217-70867236 | Msa0089390:intron | 60.0% | |
| CTTTGTAGGGACGGGGGTTG+GGG | + | chr1_2:70867219-70867238 | Msa0089390:intron | 60.0% | |
| TTTGTAGGGACGGGGGTTGG+GGG | + | chr1_2:70867220-70867239 | Msa0089390:intron | 60.0% | |
| GGAACTGCCATCCACACCTG+AGG | + | chr1_2:70868209-70868228 | Msa0089390:CDS | 60.0% | |
| ACTGCCATCCACACCTGAGG+TGG | + | chr1_2:70868212-70868231 | Msa0089390:CDS | 60.0% | |
| ACGCGCCAATTGAGGCGCGT+TGG | + | chr1_2:70862794-70862813 | Msa0089390:five_prime_UTR | 65.0% | |
| CGCCAATTGAGGCGCGTTGG+AGG | + | chr1_2:70862797-70862816 | Msa0089390:five_prime_UTR | 65.0% | |
| ACTAGGCGTGTCGCGGTGTC+CGG | - | chr1_2:70866682-70866701 | None:intergenic | 65.0% | |
| CGCGACACGCCTAGTCCTAG+AGG | + | chr1_2:70866687-70866706 | Msa0089390:intron | 65.0% | |
| ! | GGGTGCGCTGCCGCCGTCGA+AGG | - | chr1_2:70862989-70863008 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 70862752 | 70868773 | 70862752 | ID=Msa0089390;Name=Msa0089390 |
| chr1_2 | mRNA | 70862752 | 70868773 | 70862752 | ID=Msa0089390-mRNA-1;Parent=Msa0089390;Name=Msa0089390-mRNA-1;_AED=0.25;_eAED=0.25;_QI=173|1|1|1|1|1|9|423|407 |
| chr1_2 | exon | 70862752 | 70863077 | 70862752 | ID=Msa0089390-mRNA-1:exon:24416;Parent=Msa0089390-mRNA-1 |
| chr1_2 | exon | 70863187 | 70863324 | 70863187 | ID=Msa0089390-mRNA-1:exon:24417;Parent=Msa0089390-mRNA-1 |
| chr1_2 | exon | 70864062 | 70864202 | 70864062 | ID=Msa0089390-mRNA-1:exon:24418;Parent=Msa0089390-mRNA-1 |
| chr1_2 | exon | 70865268 | 70865378 | 70865268 | ID=Msa0089390-mRNA-1:exon:24419;Parent=Msa0089390-mRNA-1 |
| chr1_2 | exon | 70865466 | 70865609 | 70865466 | ID=Msa0089390-mRNA-1:exon:24420;Parent=Msa0089390-mRNA-1 |
| chr1_2 | exon | 70865695 | 70865735 | 70865695 | ID=Msa0089390-mRNA-1:exon:24421;Parent=Msa0089390-mRNA-1 |
| chr1_2 | exon | 70865846 | 70865922 | 70865846 | ID=Msa0089390-mRNA-1:exon:24422;Parent=Msa0089390-mRNA-1 |
| chr1_2 | exon | 70866885 | 70866980 | 70866885 | ID=Msa0089390-mRNA-1:exon:24423;Parent=Msa0089390-mRNA-1 |
| chr1_2 | exon | 70868028 | 70868773 | 70868028 | ID=Msa0089390-mRNA-1:exon:24424;Parent=Msa0089390-mRNA-1 |
| chr1_2 | five_prime_UTR | 70862752 | 70862924 | 70862752 | ID=Msa0089390-mRNA-1:five_prime_utr;Parent=Msa0089390-mRNA-1 |
| chr1_2 | CDS | 70862925 | 70863077 | 70862925 | ID=Msa0089390-mRNA-1:cds;Parent=Msa0089390-mRNA-1 |
| chr1_2 | CDS | 70863187 | 70863324 | 70863187 | ID=Msa0089390-mRNA-1:cds;Parent=Msa0089390-mRNA-1 |
| chr1_2 | CDS | 70864062 | 70864202 | 70864062 | ID=Msa0089390-mRNA-1:cds;Parent=Msa0089390-mRNA-1 |
| chr1_2 | CDS | 70865268 | 70865378 | 70865268 | ID=Msa0089390-mRNA-1:cds;Parent=Msa0089390-mRNA-1 |
| chr1_2 | CDS | 70865466 | 70865609 | 70865466 | ID=Msa0089390-mRNA-1:cds;Parent=Msa0089390-mRNA-1 |
| chr1_2 | CDS | 70865695 | 70865735 | 70865695 | ID=Msa0089390-mRNA-1:cds;Parent=Msa0089390-mRNA-1 |
| chr1_2 | CDS | 70865846 | 70865922 | 70865846 | ID=Msa0089390-mRNA-1:cds;Parent=Msa0089390-mRNA-1 |
| chr1_2 | CDS | 70866885 | 70866980 | 70866885 | ID=Msa0089390-mRNA-1:cds;Parent=Msa0089390-mRNA-1 |
| chr1_2 | CDS | 70868028 | 70868350 | 70868028 | ID=Msa0089390-mRNA-1:cds;Parent=Msa0089390-mRNA-1 |
| chr1_2 | three_prime_UTR | 70868351 | 70868773 | 70868351 | ID=Msa0089390-mRNA-1:three_prime_utr;Parent=Msa0089390-mRNA-1 |
| Gene Sequence |
| Protein sequence |
