Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0398670 | XP_013459093.2 | 98.188 | 607 | 10 | 1 | 1 | 606 | 1 | 607 | 0.0 | 1195 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0398670 | sp|Q9FNQ0|VIP4_ARATH | 54.016 | 635 | 243 | 18 | 5 | 605 | 5 | 624 | 1.06e-152 | 456 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0398670 | A0A396IKI1 | 98.188 | 607 | 10 | 1 | 1 | 606 | 1 | 607 | 0.0 | 1195 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0001710 | Msa0398670 | -0.816399 | 5.642592e-52 | -8.615850e-47 |
Msa0007440 | Msa0398670 | 0.824749 | 6.818610e-54 | -8.615850e-47 |
Msa0009430 | Msa0398670 | 0.820587 | 6.339644e-53 | -8.615850e-47 |
Msa0015610 | Msa0398670 | 0.818275 | 2.133521e-52 | -8.615850e-47 |
Msa0032470 | Msa0398670 | 0.842939 | 1.902843e-58 | -8.615850e-47 |
Msa0033110 | Msa0398670 | 0.828146 | 1.057344e-54 | -8.615850e-47 |
Msa0033260 | Msa0398670 | 0.833313 | 5.728451e-56 | -8.615850e-47 |
Msa0037250 | Msa0398670 | 0.807604 | 4.660565e-50 | -8.615850e-47 |
Msa0037570 | Msa0398670 | -0.805034 | 1.622322e-49 | -8.615850e-47 |
Msa0043980 | Msa0398670 | 0.842225 | 2.944139e-58 | -8.615850e-47 |
Msa0044000 | Msa0398670 | 0.823520 | 1.325191e-53 | -8.615850e-47 |
Msa0044260 | Msa0398670 | 0.806488 | 8.027649e-50 | -8.615850e-47 |
Msa0044330 | Msa0398670 | 0.816035 | 6.805244e-52 | -8.615850e-47 |
Msa0059110 | Msa0398670 | 0.802365 | 5.808429e-49 | -8.615850e-47 |
Msa0071250 | Msa0398670 | 0.807840 | 4.153354e-50 | -8.615850e-47 |
Msa0072420 | Msa0398670 | 0.880032 | 7.665683e-70 | -8.615850e-47 |
Msa0075360 | Msa0398670 | 0.832276 | 1.037008e-55 | -8.615850e-47 |
Msa0076320 | Msa0398670 | 0.832748 | 7.917953e-56 | -8.615850e-47 |
Msa0079070 | Msa0398670 | 0.843573 | 1.289583e-58 | -8.615850e-47 |
Msa0083280 | Msa0398670 | 0.855272 | 7.051301e-62 | -8.615850e-47 |
Msa0086420 | Msa0398670 | 0.808224 | 3.440607e-50 | -8.615850e-47 |
Msa0090360 | Msa0398670 | 0.832778 | 7.783896e-56 | -8.615850e-47 |
Msa0091410 | Msa0398670 | 0.832817 | 7.612024e-56 | -8.615850e-47 |
Msa0101500 | Msa0398670 | -0.822922 | 1.828129e-53 | -8.615850e-47 |
Msa0104230 | Msa0398670 | 0.803620 | 3.195194e-49 | -8.615850e-47 |
Msa0104240 | Msa0398670 | 0.818735 | 1.678677e-52 | -8.615850e-47 |
Msa0106850 | Msa0398670 | 0.822588 | 2.186242e-53 | -8.615850e-47 |
Msa0108140 | Msa0398670 | 0.801468 | 8.878360e-49 | -8.615850e-47 |
Msa0114060 | Msa0398670 | 0.833624 | 4.791045e-56 | -8.615850e-47 |
Msa0115790 | Msa0398670 | 0.830409 | 2.984918e-55 | -8.615850e-47 |
Msa0123560 | Msa0398670 | 0.834385 | 3.090129e-56 | -8.615850e-47 |
Msa0127650 | Msa0398670 | 0.854775 | 9.834865e-62 | -8.615850e-47 |
Msa0127800 | Msa0398670 | 0.817286 | 3.568272e-52 | -8.615850e-47 |
Msa0137730 | Msa0398670 | 0.833038 | 6.709848e-56 | -8.615850e-47 |
Msa0137840 | Msa0398670 | 0.817564 | 3.089116e-52 | -8.615850e-47 |
Msa0138020 | Msa0398670 | 0.808065 | 3.719078e-50 | -8.615850e-47 |
Msa0140650 | Msa0398670 | 0.808841 | 2.540295e-50 | -8.615850e-47 |
Msa0148080 | Msa0398670 | 0.842179 | 3.028971e-58 | -8.615850e-47 |
Msa0150300 | Msa0398670 | 0.872180 | 3.875797e-67 | -8.615850e-47 |
Msa0159930 | Msa0398670 | 0.808943 | 2.416265e-50 | -8.615850e-47 |
Msa0167980 | Msa0398670 | 0.801565 | 8.480161e-49 | -8.615850e-47 |
Msa0168580 | Msa0398670 | 0.807848 | 4.135467e-50 | -8.615850e-47 |
Msa0175540 | Msa0398670 | 0.806000 | 1.017342e-49 | -8.615850e-47 |
Msa0184040 | Msa0398670 | 0.830158 | 3.436841e-55 | -8.615850e-47 |
Msa0189320 | Msa0398670 | 0.884726 | 1.499380e-71 | -8.615850e-47 |
Msa0194950 | Msa0398670 | -0.835813 | 1.348270e-56 | -8.615850e-47 |
Msa0204960 | Msa0398670 | 0.826833 | 2.183005e-54 | -8.615850e-47 |
Msa0205130 | Msa0398670 | 0.815329 | 9.773493e-52 | -8.615850e-47 |
Msa0209350 | Msa0398670 | 0.827439 | 1.563335e-54 | -8.615850e-47 |
Msa0211150 | Msa0398670 | 0.814506 | 1.488168e-51 | -8.615850e-47 |
Msa0217680 | Msa0398670 | 0.806385 | 8.440467e-50 | -8.615850e-47 |
Msa0219590 | Msa0398670 | 0.822361 | 2.468180e-53 | -8.615850e-47 |
Msa0232790 | Msa0398670 | 0.802818 | 4.683294e-49 | -8.615850e-47 |
Msa0233630 | Msa0398670 | -0.819176 | 1.332519e-52 | -8.615850e-47 |
Msa0236960 | Msa0398670 | -0.814128 | 1.803704e-51 | -8.615850e-47 |
Msa0376910 | Msa0398670 | 0.808024 | 3.794606e-50 | -8.615850e-47 |
Msa0383800 | Msa0398670 | 0.833812 | 4.301976e-56 | -8.615850e-47 |
Msa0385500 | Msa0398670 | 0.824799 | 6.634652e-54 | -8.615850e-47 |
Msa0387820 | Msa0398670 | 0.801152 | 1.030387e-48 | -8.615850e-47 |
Msa0388700 | Msa0398670 | 0.800854 | 1.185495e-48 | -8.615850e-47 |
Msa0392440 | Msa0398670 | 0.803416 | 3.522090e-49 | -8.615850e-47 |
Msa0398670 | Msa0404630 | 0.836816 | 7.496607e-57 | -8.615850e-47 |
Msa0398670 | Msa0440990 | 0.826622 | 2.451655e-54 | -8.615850e-47 |
Msa0398670 | Msa0442610 | 0.814403 | 1.568601e-51 | -8.615850e-47 |
Msa0398670 | Msa0454360 | 0.841422 | 4.798720e-58 | -8.615850e-47 |
Msa0398670 | Msa0457960 | 0.833395 | 5.465500e-56 | -8.615850e-47 |
Msa0398670 | Msa0463010 | 0.830778 | 2.424383e-55 | -8.615850e-47 |
Msa0398670 | Msa0477080 | 0.856782 | 2.548682e-62 | -8.615850e-47 |
Msa0398670 | Msa0481530 | 0.804415 | 2.183979e-49 | -8.615850e-47 |
Msa0398670 | Msa0484720 | 0.832822 | 7.590122e-56 | -8.615850e-47 |
Msa0398670 | Msa0493630 | 0.810226 | 1.280497e-50 | -8.615850e-47 |
Msa0398670 | Msa0493740 | 0.878888 | 1.949800e-69 | -8.615850e-47 |
Msa0398670 | Msa0501100 | 0.810478 | 1.129855e-50 | -8.615850e-47 |
Msa0398670 | Msa0512340 | 0.809692 | 1.668569e-50 | -8.615850e-47 |
Msa0398670 | Msa0520850 | 0.806404 | 8.363415e-50 | -8.615850e-47 |
Msa0398670 | Msa0521270 | 0.812040 | 5.178366e-51 | -8.615850e-47 |
Msa0398670 | Msa0521430 | 0.800103 | 1.686364e-48 | -8.615850e-47 |
Msa0398670 | Msa0527540 | 0.828728 | 7.651880e-55 | -8.615850e-47 |
Msa0398670 | Msa0530560 | 0.815977 | 7.010966e-52 | -8.615850e-47 |
Msa0398670 | Msa0531530 | 0.830459 | 2.901439e-55 | -8.615850e-47 |
Msa0398670 | Msa0531690 | 0.814100 | 1.829282e-51 | -8.615850e-47 |
Msa0398670 | Msa0539410 | 0.844632 | 6.701911e-59 | -8.615850e-47 |
Msa0398670 | Msa0542260 | 0.822013 | 2.972547e-53 | -8.615850e-47 |
Msa0398670 | Msa0542290 | 0.822347 | 2.486929e-53 | -8.615850e-47 |
Msa0398670 | Msa0542560 | 0.807950 | 3.933933e-50 | -8.615850e-47 |
Msa0398670 | Msa0544840 | 0.817830 | 2.690846e-52 | -8.615850e-47 |
Msa0398670 | Msa0547160 | 0.808626 | 2.824360e-50 | -8.615850e-47 |
Msa0398670 | Msa0548240 | 0.879195 | 1.518601e-69 | -8.615850e-47 |
Msa0398670 | Msa0549450 | 0.823711 | 1.195457e-53 | -8.615850e-47 |
Msa0398670 | Msa0556060 | 0.801565 | 8.480161e-49 | -8.615850e-47 |
Msa0398670 | Msa0567350 | 0.841159 | 5.628224e-58 | -8.615850e-47 |
Msa0398670 | Msa0572840 | 0.800159 | 1.642393e-48 | -8.615850e-47 |
Msa0398670 | Msa0587910 | 0.812928 | 3.312008e-51 | -8.615850e-47 |
Msa0398670 | Msa0588260 | 0.812996 | 3.200590e-51 | -8.615850e-47 |
Msa0398670 | Msa0595170 | 0.815014 | 1.148659e-51 | -8.615850e-47 |
Msa0398670 | Msa0604290 | 0.816770 | 4.658411e-52 | -8.615850e-47 |
Msa0398670 | Msa0606720 | 0.821546 | 3.811619e-53 | -8.615850e-47 |
Msa0398670 | Msa0607050 | 0.807618 | 4.628612e-50 | -8.615850e-47 |
Msa0398670 | Msa0623790 | 0.826471 | 2.663692e-54 | -8.615850e-47 |
Msa0398670 | Msa0624060 | 0.800590 | 1.341874e-48 | -8.615850e-47 |
Msa0398670 | Msa0634890 | 0.829821 | 4.153917e-55 | -8.615850e-47 |
Msa0398670 | Msa0643560 | 0.818993 | 1.466198e-52 | -8.615850e-47 |
Msa0398670 | Msa0647500 | 0.814530 | 1.470105e-51 | -8.615850e-47 |
Msa0398670 | Msa0649490 | 0.819348 | 1.217598e-52 | -8.615850e-47 |
Msa0398670 | Msa0658890 | 0.808950 | 2.406840e-50 | -8.615850e-47 |
Msa0398670 | Msa0663390 | 0.811360 | 7.280071e-51 | -8.615850e-47 |
Msa0398670 | Msa0665860 | 0.845191 | 4.737836e-59 | -8.615850e-47 |
Msa0398670 | Msa0666270 | 0.847521 | 1.097015e-59 | -8.615850e-47 |
Msa0398670 | Msa0673160 | 0.809018 | 2.327499e-50 | -8.615850e-47 |
Msa0398670 | Msa0673630 | 0.841098 | 5.836866e-58 | -8.615850e-47 |
Msa0398670 | Msa0676130 | 0.806549 | 7.795323e-50 | -8.615850e-47 |
Msa0398670 | Msa0676180 | 0.807969 | 3.897692e-50 | -8.615850e-47 |
Msa0398670 | Msa0690860 | 0.811741 | 6.014468e-51 | -8.615850e-47 |
Msa0398670 | Msa0692980 | 0.807836 | 4.161044e-50 | -8.615850e-47 |
Msa0398670 | Msa0698540 | 0.816697 | 4.837475e-52 | -8.615850e-47 |
Msa0398670 | Msa0707250 | 0.835340 | 1.776332e-56 | -8.615850e-47 |
Msa0398670 | Msa0709400 | 0.867545 | 1.264308e-65 | -8.615850e-47 |
Msa0398670 | Msa0711100 | 0.805550 | 1.264637e-49 | -8.615850e-47 |
Msa0398670 | Msa0711450 | 0.858974 | 5.699684e-63 | -8.615850e-47 |
Msa0398670 | Msa0727550 | 0.823259 | 1.524999e-53 | -8.615850e-47 |
Msa0398670 | Msa0737600 | 0.817398 | 3.367332e-52 | -8.615850e-47 |
Msa0398670 | Msa0740510 | 0.821139 | 4.732605e-53 | -8.615850e-47 |
Msa0398670 | Msa0741440 | 0.877369 | 6.640383e-69 | -8.615850e-47 |
Msa0398670 | Msa0742750 | 0.810735 | 9.942513e-51 | -8.615850e-47 |
Msa0398670 | Msa0747060 | 0.809783 | 1.595318e-50 | -8.615850e-47 |
Msa0398670 | Msa0786750 | 0.804833 | 1.786478e-49 | -8.615850e-47 |
Msa0398670 | Msa0788850 | 0.828283 | 9.798511e-55 | -8.615850e-47 |
Msa0398670 | Msa0794670 | 0.803057 | 4.180036e-49 | -8.615850e-47 |
Msa0398670 | Msa0802010 | 0.831549 | 1.567534e-55 | -8.615850e-47 |
Msa0398670 | Msa0806790 | 0.803848 | 2.865324e-49 | -8.615850e-47 |
Msa0398670 | Msa0820650 | 0.818953 | 1.497562e-52 | -8.615850e-47 |
Msa0398670 | Msa0820770 | 0.820056 | 8.391711e-53 | -8.615850e-47 |
Msa0398670 | Msa0822500 | 0.843791 | 1.127629e-58 | -8.615850e-47 |
Msa0398670 | Msa0831110 | 0.813534 | 2.438614e-51 | -8.615850e-47 |
Msa0398670 | Msa0832150 | 0.830154 | 3.444723e-55 | -8.615850e-47 |
Msa0398670 | Msa0832340 | 0.820950 | 5.232369e-53 | -8.615850e-47 |
Msa0398670 | Msa0847770 | 0.815927 | 7.191888e-52 | -8.615850e-47 |
Msa0398670 | Msa0849040 | 0.824344 | 8.495191e-54 | -8.615850e-47 |
Msa0398670 | Msa0858390 | 0.805066 | 1.597124e-49 | -8.615850e-47 |
Msa0398670 | Msa0861090 | 0.817083 | 3.962406e-52 | -8.615850e-47 |
Msa0398670 | Msa0866950 | 0.813409 | 2.597500e-51 | -8.615850e-47 |
Msa0398670 | Msa0867520 | -0.802379 | 5.770390e-49 | -8.615850e-47 |
Msa0398670 | Msa0878220 | 0.817852 | 2.659242e-52 | -8.615850e-47 |
Msa0398670 | Msa0880020 | 0.813998 | 1.926582e-51 | -8.615850e-47 |
Msa0398670 | Msa0934850 | 0.839228 | 1.796341e-57 | -8.615850e-47 |
Msa0398670 | Msa0944020 | 0.802826 | 4.666496e-49 | -8.615850e-47 |
Msa0398670 | Msa0945970 | 0.813340 | 2.689946e-51 | -8.615850e-47 |
Msa0398670 | Msa0963270 | 0.857528 | 1.535050e-62 | -8.615850e-47 |
Msa0398670 | Msa0969810 | 0.802078 | 6.654301e-49 | -8.615850e-47 |
Msa0398670 | Msa0980880 | 0.813016 | 3.168698e-51 | -8.615850e-47 |
Msa0398670 | Msa1017630 | 0.800940 | 1.138493e-48 | -8.615850e-47 |
Msa0398670 | Msa1024700 | 0.818031 | 2.423078e-52 | -8.615850e-47 |
Msa0398670 | Msa1029050 | 0.814054 | 1.873110e-51 | -8.615850e-47 |
Msa0398670 | Msa1031660 | 0.849247 | 3.655484e-60 | -8.615850e-47 |
Msa0398670 | Msa1033400 | 0.836373 | 9.721740e-57 | -8.615850e-47 |
Msa0398670 | Msa1034150 | 0.826915 | 2.086857e-54 | -8.615850e-47 |
Msa0398670 | Msa1041850 | 0.806950 | 6.411462e-50 | -8.615850e-47 |
Msa0398670 | Msa1058170 | 0.815233 | 1.026949e-51 | -8.615850e-47 |
Msa0398670 | Msa1058750 | 0.808745 | 2.662897e-50 | -8.615850e-47 |
Msa0398670 | Msa1059470 | 0.819108 | 1.380868e-52 | -8.615850e-47 |
Msa0398670 | Msa1070720 | 0.861048 | 1.348827e-63 | -8.615850e-47 |
Msa0398670 | Msa1073080 | 0.817697 | 2.882594e-52 | -8.615850e-47 |
Msa0398670 | Msa1077130 | 0.812277 | 4.597750e-51 | -8.615850e-47 |
Msa0398670 | Msa1077200 | 0.803937 | 2.746978e-49 | -8.615850e-47 |
Msa0398670 | Msa1081930 | 0.800316 | 1.526328e-48 | -8.615850e-47 |
Msa0398670 | Msa1081980 | 0.839796 | 1.278948e-57 | -8.615850e-47 |
Msa0398670 | Msa1089460 | 0.809495 | 1.839417e-50 | -8.615850e-47 |
Msa0398670 | Msa1109680 | 0.819872 | 9.244862e-53 | -8.615850e-47 |
Msa0398670 | Msa1117240 | 0.858848 | 6.216278e-63 | -8.615850e-47 |
Msa0398670 | Msa1122150 | 0.804731 | 1.876308e-49 | -8.615850e-47 |
Msa0398670 | Msa1124960 | 0.852986 | 3.219689e-61 | -8.615850e-47 |
Msa0398670 | Msa1128060 | 0.830443 | 2.928313e-55 | -8.615850e-47 |
Msa0398670 | Msa1130980 | 0.802447 | 5.586520e-49 | -8.615850e-47 |
Msa0398670 | Msa1158640 | -0.860399 | 2.122027e-63 | -8.615850e-47 |
Msa0398670 | Msa1159840 | 0.836070 | 1.160411e-56 | -8.615850e-47 |
Msa0398670 | Msa1160590 | 0.812007 | 5.264793e-51 | -8.615850e-47 |
Msa0398670 | Msa1165940 | 0.802595 | 5.206624e-49 | -8.615850e-47 |
Msa0398670 | Msa1167340 | 0.824614 | 7.335844e-54 | -8.615850e-47 |
Msa0398670 | Msa1176720 | 0.835684 | 1.454169e-56 | -8.615850e-47 |
Msa0398670 | Msa1178580 | 0.804850 | 1.772462e-49 | -8.615850e-47 |
Msa0398670 | Msa1181250 | 0.827732 | 1.329827e-54 | -8.615850e-47 |
Msa0398670 | Msa1181330 | 0.815687 | 8.138479e-52 | -8.615850e-47 |
Msa0398670 | Msa1181910 | 0.843917 | 1.043365e-58 | -8.615850e-47 |
Msa0398670 | Msa1183950 | 0.838392 | 2.956177e-57 | -8.615850e-47 |
Msa0398670 | Msa1184910 | 0.812428 | 4.261752e-51 | -8.615850e-47 |
Msa0398670 | Msa1204530 | 0.826466 | 2.671815e-54 | -8.615850e-47 |
Msa0398670 | Msa1204630 | 0.800431 | 1.445614e-48 | -8.615850e-47 |
Msa0398670 | Msa1207310 | 0.822014 | 2.971701e-53 | -8.615850e-47 |
Msa0398670 | Msa1208380 | 0.807267 | 5.495822e-50 | -8.615850e-47 |
Msa0398670 | Msa1213890 | 0.809743 | 1.627268e-50 | -8.615850e-47 |
Msa0398670 | Msa1213980 | 0.831710 | 1.430493e-55 | -8.615850e-47 |
Msa0398670 | Msa1225130 | 0.806918 | 6.514520e-50 | -8.615850e-47 |
Msa0398670 | Msa1228520 | 0.826285 | 2.949804e-54 | -8.615850e-47 |
Msa0398670 | Msa1228590 | 0.822543 | 2.239594e-53 | -8.615850e-47 |
Msa0398670 | Msa1231840 | 0.823810 | 1.133759e-53 | -8.615850e-47 |
Msa0398670 | Msa1238840 | 0.842396 | 2.652289e-58 | -8.615850e-47 |
Msa0398670 | Msa1244600 | 0.867383 | 1.424978e-65 | -8.615850e-47 |
Msa0398670 | Msa1244720 | -0.806200 | 9.233680e-50 | -8.615850e-47 |
Msa0398670 | Msa1250510 | 0.809138 | 2.194141e-50 | -8.615850e-47 |
Msa0398670 | Msa1253020 | 0.816502 | 5.349303e-52 | -8.615850e-47 |
Msa0398670 | Msa1254730 | 0.819736 | 9.930108e-53 | -8.615850e-47 |
Msa0398670 | Msa1256700 | 0.800442 | 1.438798e-48 | -8.615850e-47 |
Msa0398670 | Msa1257750 | 0.811363 | 7.269266e-51 | -8.615850e-47 |
Msa0398670 | Msa1271130 | 0.808681 | 2.748409e-50 | -8.615850e-47 |
Msa0398670 | Msa1275050 | 0.807450 | 5.023975e-50 | -8.615850e-47 |
Msa0398670 | Msa1276150 | 0.808270 | 3.362819e-50 | -8.615850e-47 |
Msa0398670 | Msa1279400 | 0.841076 | 5.914930e-58 | -8.615850e-47 |
Msa0398670 | Msa1280320 | 0.811304 | 7.485406e-51 | -8.615850e-47 |
Msa0398670 | Msa1280340 | 0.819008 | 1.454913e-52 | -8.615850e-47 |
Msa0398670 | Msa1294120 | 0.804863 | 1.761436e-49 | -8.615850e-47 |
Msa0398670 | Msa1294820 | 0.812003 | 5.274784e-51 | -8.615850e-47 |
Msa0398670 | Msa1297510 | 0.806937 | 6.454866e-50 | -8.615850e-47 |
Msa0398670 | Msa1305660 | 0.867933 | 9.492638e-66 | -8.615850e-47 |
Msa0398670 | Msa1305810 | 0.835395 | 1.720241e-56 | -8.615850e-47 |
Msa0398670 | Msa1329200 | 0.811205 | 7.864160e-51 | -8.615850e-47 |
Msa0398670 | Msa1331000 | 0.806521 | 7.900970e-50 | -8.615850e-47 |
Msa0398670 | Msa1331320 | 0.860348 | 2.199760e-63 | -8.615850e-47 |
Msa0398670 | Msa1331350 | 0.802954 | 4.389871e-49 | -8.615850e-47 |
Msa0398670 | Msa1335540 | 0.813087 | 3.057350e-51 | -8.615850e-47 |
Msa0398670 | Msa1336290 | 0.840468 | 8.541015e-58 | -8.615850e-47 |
Msa0398670 | Msa1341060 | 0.864375 | 1.271949e-64 | -8.615850e-47 |
Msa0398670 | Msa1346840 | 0.866472 | 2.780443e-65 | -8.615850e-47 |
Msa0398670 | Msa1347760 | 0.839249 | 1.773517e-57 | -8.615850e-47 |
Msa0398670 | Msa1351890 | 0.828601 | 8.213295e-55 | -8.615850e-47 |
Msa0398670 | Msa1353980 | 0.807046 | 6.119363e-50 | -8.615850e-47 |
Msa0398670 | Msa1357620 | 0.846970 | 1.554364e-59 | -8.615850e-47 |
Msa0398670 | Msa1358500 | 0.835954 | 1.241692e-56 | -8.615850e-47 |
Msa0398670 | Msa1360440 | 0.806107 | 9.660235e-50 | -8.615850e-47 |
Msa0398670 | Msa1370070 | -0.807646 | 4.566811e-50 | -8.615850e-47 |
Msa0398670 | Msa1374470 | 0.811615 | 6.406053e-51 | -8.615850e-47 |
Msa0398670 | Msa1385770 | 0.804895 | 1.734213e-49 | -8.615850e-47 |
Msa0398670 | Msa1391410 | 0.836106 | 1.136733e-56 | -8.615850e-47 |
Msa0398670 | Msa1392980 | 0.810269 | 1.253556e-50 | -8.615850e-47 |
Msa0398670 | Msa1393570 | 0.839341 | 1.678989e-57 | -8.615850e-47 |
Msa0398670 | Msa1395970 | 0.810337 | 1.211914e-50 | -8.615850e-47 |
Msa0398670 | Msa1401990 | 0.866092 | 3.670448e-65 | -8.615850e-47 |
Msa0398670 | Msa1405310 | 0.836841 | 7.386482e-57 | -8.615850e-47 |
Msa0398670 | Msa1409240 | 0.806437 | 8.231501e-50 | -8.615850e-47 |
Msa0398670 | Msa1412890 | 0.804908 | 1.723733e-49 | -8.615850e-47 |
Msa0398670 | Msa1419690 | 0.881942 | 1.577107e-70 | -8.615850e-47 |
Msa0398670 | Msa1426890 | 0.812151 | 4.898087e-51 | -8.615850e-47 |
Msa0398670 | Msa1428880 | 0.812943 | 3.287120e-51 | -8.615850e-47 |
Msa0398670 | Msa1432420 | 0.851104 | 1.102746e-60 | -8.615850e-47 |
Msa0398670 | Msa1433390 | 0.828148 | 1.055868e-54 | -8.615850e-47 |
Msa0398670 | Msa1434420 | -0.855953 | 4.461493e-62 | -8.615850e-47 |
Msa0398670 | Msa1435240 | 0.807452 | 5.020885e-50 | -8.615850e-47 |
Msa0398670 | Msa1436650 | 0.811161 | 8.040984e-51 | -8.615850e-47 |
Msa0398670 | Msa1439550 | 0.803520 | 3.352694e-49 | -8.615850e-47 |
Msa0398670 | Msa1440200 | 0.837942 | 3.859228e-57 | -8.615850e-47 |
Msa0398670 | Msa1440950 | 0.853404 | 2.443481e-61 | -8.615850e-47 |
Msa0398670 | Msa1451560 | 0.833033 | 6.726840e-56 | -8.615850e-47 |
Msa0398670 | Msa1452240 | 0.803390 | 3.567456e-49 | -8.615850e-47 |
Msa0398670 | Msa1453610 | 0.808693 | 2.732128e-50 | -8.615850e-47 |
Msa0398670 | Msa1453880 | 0.815204 | 1.042282e-51 | -8.615850e-47 |
Msa0398670 | Msa1457620 | 0.879916 | 8.429827e-70 | -8.615850e-47 |
Msa0398670 | Msa1458290 | 0.806850 | 6.733822e-50 | -8.615850e-47 |
Msa0398670 | Msa1463900 | 0.803117 | 4.063118e-49 | -8.615850e-47 |
Msa0240920 | Msa0398670 | 0.885331 | 8.913526e-72 | -8.615850e-47 |
Msa0241390 | Msa0398670 | 0.842321 | 2.776398e-58 | -8.615850e-47 |
Msa0243090 | Msa0398670 | 0.830908 | 2.253174e-55 | -8.615850e-47 |
Msa0257330 | Msa0398670 | -0.802108 | 6.560521e-49 | -8.615850e-47 |
Msa0261090 | Msa0398670 | 0.838742 | 2.400672e-57 | -8.615850e-47 |
Msa0271510 | Msa0398670 | 0.899362 | 2.136932e-77 | -8.615850e-47 |
Msa0272300 | Msa0398670 | 0.875758 | 2.392980e-68 | -8.615850e-47 |
Msa0278580 | Msa0398670 | 0.808476 | 3.039838e-50 | -8.615850e-47 |
Msa0279240 | Msa0398670 | 0.805632 | 1.215453e-49 | -8.615850e-47 |
Msa0280090 | Msa0398670 | 0.813231 | 2.841739e-51 | -8.615850e-47 |
Msa0281530 | Msa0398670 | 0.807032 | 6.160812e-50 | -8.615850e-47 |
Msa0285330 | Msa0398670 | 0.808321 | 3.280679e-50 | -8.615850e-47 |
Msa0287410 | Msa0398670 | 0.810489 | 1.124066e-50 | -8.615850e-47 |
Msa0305410 | Msa0398670 | 0.866985 | 1.909801e-65 | -8.615850e-47 |
Msa0309770 | Msa0398670 | 0.840786 | 7.050609e-58 | -8.615850e-47 |
Msa0315440 | Msa0398670 | -0.832570 | 8.765310e-56 | -8.615850e-47 |
Msa0316390 | Msa0398670 | 0.814729 | 1.328378e-51 | -8.615850e-47 |
Msa0317940 | Msa0398670 | 0.848514 | 5.840139e-60 | -8.615850e-47 |
Msa0318680 | Msa0398670 | 0.868491 | 6.275850e-66 | -8.615850e-47 |
Msa0318980 | Msa0398670 | 0.813819 | 2.110049e-51 | -8.615850e-47 |
Msa0334550 | Msa0398670 | 0.833743 | 4.475623e-56 | -8.615850e-47 |
Msa0340380 | Msa0398670 | 0.812670 | 3.772375e-51 | -8.615850e-47 |
Msa0341780 | Msa0398670 | -0.804478 | 2.118955e-49 | -8.615850e-47 |
Msa0342410 | Msa0398670 | 0.806984 | 6.308624e-50 | -8.615850e-47 |
Msa0351470 | Msa0398670 | 0.815296 | 9.939312e-52 | -8.615850e-47 |
Msa0357900 | Msa0398670 | 0.802624 | 5.135486e-49 | -8.615850e-47 |
Msa0361490 | Msa0398670 | 0.806146 | 9.479327e-50 | -8.615850e-47 |
Msa0363790 | Msa0398670 | 0.808165 | 3.541985e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0398670 | MtrunA17_Chr3g0086581 | 98.188 | 607 | 10 | 1 | 1 | 606 | 1 | 607 | 0.0 | 1195 |
Msa0398670 | MtrunA17_Chr3g0086571 | 97.858 | 607 | 12 | 1 | 1 | 606 | 1 | 607 | 0.0 | 1192 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0398670 | AT5G61150.2 | 54.186 | 633 | 243 | 18 | 5 | 605 | 5 | 622 | 5.12e-154 | 457 |
Msa0398670 | AT5G61150.1 | 54.016 | 635 | 243 | 18 | 5 | 605 | 5 | 624 | 1.08e-153 | 456 |
Find 177 sgRNAs with CRISPR-Local
Find 612 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTGTTGATCACTGTATTTCT+TGG | 0.161112 | 3_2:+20619049 | Msa0398670:three_prime_UTR |
ACCTTTGTAACTGATGAATT+TGG | 0.177630 | 3_2:+20615405 | Msa0398670:CDS |
CGATGGGTTGTTGGTTTCTT+AGG | 0.186028 | 3_2:-20618506 | None:intergenic |
TGATGATGAAGAGGAGGATA+TGG | 0.211401 | 3_2:+20614614 | Msa0398670:CDS |
GACTCTTCTCTCTCATCATC+TGG | 0.245899 | 3_2:-20617216 | None:intergenic |
CAAAAGAGTAAGAATTTAAA+AGG | 0.255676 | 3_2:+20618437 | Msa0398670:CDS |
AACGACATCCCTACGCTTAC+TGG | 0.260769 | 3_2:-20611736 | None:intergenic |
AATTCACCTTTCCATGTCTA+AGG | 0.291409 | 3_2:-20616335 | None:intergenic |
AACACAAGGCAGACCTTTCC+TGG | 0.291986 | 3_2:-20614947 | None:intergenic |
AGTCTGATCTTTGTCATCTC+TGG | 0.293086 | 3_2:-20614544 | None:intergenic |
CCGGAAATTCGTGATGTATT+TGG | 0.297525 | 3_2:+20614585 | Msa0398670:CDS |
CCAAATACATCACGAATTTC+CGG | 0.297709 | 3_2:-20614585 | None:intergenic |
AGGCTGAAAGTCAGACTATC+AGG | 0.307554 | 3_2:+20616685 | Msa0398670:intron |
CAAAGATCAGACTCATGATT+TGG | 0.308044 | 3_2:+20614554 | Msa0398670:CDS |
TGGATCAACTCCCATGATAT+TGG | 0.314016 | 3_2:-20615346 | None:intergenic |
CCTCTGTATTCCCTGCTTGT+TGG | 0.322148 | 3_2:+20619009 | Msa0398670:three_prime_UTR |
AGAATCAAACCCCTTCCTTT+TGG | 0.325587 | 3_2:-20618465 | None:intergenic |
TTTCTACGCTCTCTCTGTTT+GGG | 0.341598 | 3_2:-20611231 | None:intergenic |
GGAAGCATTCAGTTATTGAT+TGG | 0.350831 | 3_2:+20616255 | Msa0398670:CDS |
AGGAGGCGTCAACTTTCTCC+TGG | 0.360444 | 3_2:+20616768 | Msa0398670:CDS |
GATGATGAAGAGGAGGATAT+GGG | 0.386378 | 3_2:+20614615 | Msa0398670:CDS |
CGTCCACCACCAGCTCTTCC+AGG | 0.388905 | 3_2:+20614929 | Msa0398670:CDS |
GTCATTCGGCGATGGGTTGT+TGG | 0.403588 | 3_2:-20618515 | None:intergenic |
GACCTACGAGGGATGCTCTT+TGG | 0.404064 | 3_2:-20617147 | None:intergenic |
GTTTAAAGTTTCCAATATCA+TGG | 0.404176 | 3_2:+20615335 | Msa0398670:CDS |
AGTGAAGGTGAGAGAGAGGT+TGG | 0.405162 | 3_2:+20611630 | Msa0398670:CDS |
CTTACAGATGTTGTGCCATC+AGG | 0.408963 | 3_2:-20615486 | None:intergenic |
GCAGGATGAAGGAGAGGGAG+GGG | 0.417436 | 3_2:+20611539 | Msa0398670:intron |
TCATAATTCGTTTCTCTGCT+CGG | 0.419109 | 3_2:-20617022 | None:intergenic |
CAAATACATCACGAATTTCC+GGG | 0.420870 | 3_2:-20614584 | None:intergenic |
TTGAGGATTGGATTCATGTT+CGG | 0.429047 | 3_2:-20611337 | None:intergenic |
GAAGCATTCAGTTATTGATT+GGG | 0.436645 | 3_2:+20616256 | Msa0398670:CDS |
TACAGAATTGAGTTGAGGAT+TGG | 0.437265 | 3_2:-20611349 | None:intergenic |
AAAGGCCTCGCTCTCGTATG+AGG | 0.438637 | 3_2:+20617271 | Msa0398670:CDS |
GATGAAGGAGAGGGAGGGGT+AGG | 0.441542 | 3_2:+20611543 | Msa0398670:CDS |
GGAAGAAGAGAGTGAAGGTA+GGG | 0.445901 | 3_2:+20611665 | Msa0398670:CDS |
TGGATCTGATGATGATGAAC+AGG | 0.450572 | 3_2:+20611764 | Msa0398670:CDS |
TGGAAGAAGAGAGTGAAGGT+AGG | 0.450961 | 3_2:+20611664 | Msa0398670:CDS |
AAAGCAATGCTCGCTTTGTA+AGG | 0.456005 | 3_2:+20616223 | Msa0398670:CDS |
CTGGGTAACCCACTTGGTGC+CGG | 0.457697 | 3_2:-20617197 | None:intergenic |
ACGAATTATGAATGCTAAGA+AGG | 0.462052 | 3_2:+20617034 | Msa0398670:CDS |
GAGGGTGAAGGAGAAGTTGA+GGG | 0.462675 | 3_2:+20611579 | Msa0398670:CDS |
AGAAGAGAGTGAAGGTAGGG+GGG | 0.466996 | 3_2:+20611668 | Msa0398670:CDS |
AGAGAGTGAAGGTGAGAGAG+AGG | 0.471012 | 3_2:+20611626 | Msa0398670:CDS |
AAGTTCATCTTCTTCCTCCT+CGG | 0.471897 | 3_2:-20611310 | None:intergenic |
AGAACAAGAAAATGATGCTT+CGG | 0.474694 | 3_2:+20617344 | Msa0398670:CDS |
GAGTAAGAATTTAAAAGGTA+AGG | 0.475961 | 3_2:+20618442 | Msa0398670:CDS |
CATCATCTGGGTAACCCACT+TGG | 0.477731 | 3_2:-20617203 | None:intergenic |
GTCTGATCTTTGTCATCTCT+GGG | 0.477751 | 3_2:-20614543 | None:intergenic |
ACATAATTGTCATTCGGCGA+TGG | 0.478658 | 3_2:-20618523 | None:intergenic |
AAGGGGTTTGATTCTGATGA+AGG | 0.479724 | 3_2:+20618473 | Msa0398670:CDS |
TACGCTCTCTCTGTTTGGGT+GGG | 0.484409 | 3_2:-20611227 | None:intergenic |
GAAGAAGAGAGTGAAGGTAG+GGG | 0.484413 | 3_2:+20611666 | Msa0398670:CDS |
CCTTGTCGTCGAATTCTCAT+CGG | 0.488466 | 3_2:+20616482 | Msa0398670:CDS |
TCTTACTCGTAAGCGCGAAA+AGG | 0.491879 | 3_2:+20616719 | Msa0398670:CDS |
ACTTGGGCCACCATTGGAGT+TGG | 0.492300 | 3_2:+20614895 | Msa0398670:CDS |
ATTTAAAAGGTAAGGCCAAA+AGG | 0.493936 | 3_2:+20618450 | Msa0398670:CDS |
AGAGGGTGAAGGAGAAGTTG+AGG | 0.494925 | 3_2:+20611578 | Msa0398670:CDS |
AAGAAGAGAGTGAAGGTAGG+GGG | 0.497291 | 3_2:+20611667 | Msa0398670:CDS |
CAGATGATGCAGAATCTCTT+CGG | 0.498212 | 3_2:+20611279 | Msa0398670:CDS |
CATAATTGTCATTCGGCGAT+GGG | 0.499895 | 3_2:-20618522 | None:intergenic |
CGTAGGGATGTCGTTGAAAG+TGG | 0.500557 | 3_2:+20611744 | Msa0398670:CDS |
GAAGGAGAAGTTGAGGGGCA+AGG | 0.501263 | 3_2:+20611585 | Msa0398670:CDS |
TGGGTAACCCACTTGGTGCC+GGG | 0.501264 | 3_2:-20617196 | None:intergenic |
TTTAGAGGATGCTTTGGATG+AGG | 0.502707 | 3_2:+20616794 | Msa0398670:CDS |
CTACGCTCTCTCTGTTTGGG+TGG | 0.502714 | 3_2:-20611228 | None:intergenic |
TAAGCCACTTGGGCCACCAT+TGG | 0.504404 | 3_2:+20614889 | Msa0398670:CDS |
TTGCAGGATGAAGGAGAGGG+AGG | 0.504951 | 3_2:+20611537 | Msa0398670:intron |
GTTGTTGGTTTCTTAGGAGG+AGG | 0.507805 | 3_2:-20618500 | None:intergenic |
TTTAAAGTTTCCAATATCAT+GGG | 0.510569 | 3_2:+20615336 | Msa0398670:CDS |
GGGTGGGAAAAGTGAAGAGA+AGG | 0.510570 | 3_2:-20611211 | None:intergenic |
AGATATCCTGCGGAGGAGGA+AGG | 0.511585 | 3_2:+20614770 | Msa0398670:CDS |
TGCAGGATGAAGGAGAGGGA+GGG | 0.511951 | 3_2:+20611538 | Msa0398670:intron |
TCCAAATTCATCAGTTACAA+AGG | 0.512124 | 3_2:-20615406 | None:intergenic |
CGCTTTGTAAGGTGGTCTGA+TGG | 0.512150 | 3_2:+20616234 | Msa0398670:CDS |
GGTAGGGCAAGAAGTTGAAG+AGG | 0.514949 | 3_2:+20611560 | Msa0398670:CDS |
AAAGATGTGCTTGATCATGC+TGG | 0.515881 | 3_2:-20616311 | None:intergenic |
GATATCCTGCGGAGGAGGAA+GGG | 0.517353 | 3_2:+20614771 | Msa0398670:CDS |
AAACAAGAAGCGCATACGCT+TGG | 0.520008 | 3_2:+20615428 | Msa0398670:CDS |
ATGAAGGAGAGGGAGGGGTA+GGG | 0.523344 | 3_2:+20611544 | Msa0398670:CDS |
ACCTTTCCTGGAAGAGCTGG+TGG | 0.524128 | 3_2:-20614935 | None:intergenic |
AGAGGTTGGTGATCAGAGAG+TGG | 0.525201 | 3_2:+20611644 | Msa0398670:CDS |
ACTCTTCTCTCTCATCATCT+GGG | 0.528829 | 3_2:-20617215 | None:intergenic |
AGTTGACGCCTCCTCTCAGT+TGG | 0.530113 | 3_2:-20616759 | None:intergenic |
AAAGGTAAGGCCAAAAGGAA+GGG | 0.530659 | 3_2:+20618455 | Msa0398670:CDS |
CAGACCTTTCCTGGAAGAGC+TGG | 0.530664 | 3_2:-20614938 | None:intergenic |
TGTCAGACATAATTGTCATT+CGG | 0.533240 | 3_2:-20618529 | None:intergenic |
TTTCCTGGAAGAGCTGGTGG+TGG | 0.533508 | 3_2:-20614932 | None:intergenic |
TCATGATTTGGATTCTGCCC+CGG | 0.534074 | 3_2:+20614566 | Msa0398670:CDS |
TGGGTTGTTGGTTTCTTAGG+AGG | 0.534824 | 3_2:-20618503 | None:intergenic |
GTAGAGATATCCTGCGGAGG+AGG | 0.536010 | 3_2:+20614766 | Msa0398670:intron |
AACTCCAATGGTGGCCCAAG+TGG | 0.536324 | 3_2:-20614893 | None:intergenic |
AGAATTCGACGACAAGGAAG+AGG | 0.537175 | 3_2:-20616476 | None:intergenic |
AAAAGGTAAGGCCAAAAGGA+AGG | 0.537691 | 3_2:+20618454 | Msa0398670:CDS |
TAACTGCAATTGTTGACTCA+AGG | 0.540824 | 3_2:+20616509 | Msa0398670:CDS |
TGAGGCAGAATATGAGGATG+AGG | 0.541830 | 3_2:+20617305 | Msa0398670:CDS |
GGTGGGAAAAGTGAAGAGAA+GGG | 0.544645 | 3_2:-20611210 | None:intergenic |
AGTTCTTGACGTATCTGAGC+AGG | 0.545394 | 3_2:+20616284 | Msa0398670:CDS |
ATGATGAAGAGGAGGATATG+GGG | 0.546074 | 3_2:+20614616 | Msa0398670:CDS |
AGAACAATATTGTACGTTGG+AGG | 0.547091 | 3_2:+20615451 | Msa0398670:CDS |
CTATGAAAAGAGCTTGAGAC+CGG | 0.547303 | 3_2:+20614796 | Msa0398670:CDS |
GGAGGCGTCAACTTTCTCCT+GGG | 0.547641 | 3_2:+20616769 | Msa0398670:CDS |
TATGGGGTATGCAGTTCAGC+AGG | 0.547799 | 3_2:+20614632 | Msa0398670:CDS |
GGTATTGCAGGATGAAGGAG+AGG | 0.549776 | 3_2:+20611533 | Msa0398670:intron |
AGAAGTTGAGGGGCAAGGAG+AGG | 0.549862 | 3_2:+20611590 | Msa0398670:CDS |
CAAGCAGGGAATACAGAGGA+GGG | 0.550831 | 3_2:-20619005 | None:intergenic |
GAGACAAAATACCAACAAGC+AGG | 0.552777 | 3_2:-20619020 | None:intergenic |
CACAAGTTCTAAGCTCAAAA+CGG | 0.552860 | 3_2:+20611175 | Msa0398670:five_prime_UTR |
AGAAAATGATGCTTCGGATG+AGG | 0.553139 | 3_2:+20617350 | Msa0398670:CDS |
AAGGTAAGGCCAAAAGGAAG+GGG | 0.555300 | 3_2:+20618456 | Msa0398670:CDS |
CAAGAAGTTGAAGAGGGTGA+AGG | 0.556138 | 3_2:+20611567 | Msa0398670:CDS |
TGATTCTGAGGCAGAATATG+AGG | 0.556925 | 3_2:+20617299 | Msa0398670:CDS |
TAGCTCCCTTCCTCCTCCGC+AGG | 0.559719 | 3_2:-20614776 | None:intergenic |
TCCCACCAGCAAAATCCTCC+CGG | 0.563107 | 3_2:+20617178 | Msa0398670:CDS |
AATCTTACAGAATTGAGTTG+AGG | 0.563407 | 3_2:-20611354 | None:intergenic |
AAGACGATGAGGAAGAAGAA+AGG | 0.567710 | 3_2:+20617253 | Msa0398670:CDS |
GAAGAAGAAGCAGAGAGTGA+AGG | 0.568085 | 3_2:+20611615 | Msa0398670:CDS |
ACCACCAGCTCTTCCAGGAA+AGG | 0.568476 | 3_2:+20614934 | Msa0398670:CDS |
AGCAGGGAATACAGAGGAGG+GGG | 0.570578 | 3_2:-20619003 | None:intergenic |
GTAAGCGCGAAAAGGTGAAT+CGG | 0.570993 | 3_2:+20616727 | Msa0398670:CDS |
AAAGTAGTTATCATACATGT+CGG | 0.579698 | 3_2:+20619160 | Msa0398670:three_prime_UTR |
AAAACTAAAGATAAGCCACT+TGG | 0.583846 | 3_2:+20614878 | Msa0398670:CDS |
AGAGCATCAGTATGAATCAG+AGG | 0.587246 | 3_2:+20614838 | Msa0398670:CDS |
TGTTGACTCAAGGCAAAGGA+AGG | 0.588843 | 3_2:+20616519 | Msa0398670:CDS |
GTATTGCAGGATGAAGGAGA+GGG | 0.588913 | 3_2:+20611534 | Msa0398670:intron |
TCATCAGCAAGTATATCCTC+CGG | 0.593563 | 3_2:-20614815 | None:intergenic |
TAGAACACAGCGTCACTATG+AGG | 0.593921 | 3_2:+20616980 | Msa0398670:CDS |
AGGGTGAAGGAGAAGTTGAG+GGG | 0.595987 | 3_2:+20611580 | Msa0398670:CDS |
AGAGTGGAAGAAGAGAGTGA+AGG | 0.597932 | 3_2:+20611660 | Msa0398670:CDS |
GTGTTGTTACCAGTAAGCGT+AGG | 0.599734 | 3_2:+20611727 | Msa0398670:CDS |
TGTTGTTACCAGTAAGCGTA+GGG | 0.600112 | 3_2:+20611728 | Msa0398670:CDS |
GTAGGGCAAGAAGTTGAAGA+GGG | 0.600226 | 3_2:+20611561 | Msa0398670:CDS |
AAGGCCTCGCTCTCGTATGA+GGG | 0.604558 | 3_2:+20617272 | Msa0398670:CDS |
AAAATCCTCCCGGCACCAAG+TGG | 0.609142 | 3_2:+20617188 | Msa0398670:CDS |
AGTGGAATCTCCAACTCCAA+TGG | 0.611411 | 3_2:-20614905 | None:intergenic |
CAGGGAATTCTGCAATCACA+AGG | 0.612303 | 3_2:+20616424 | Msa0398670:intron |
GCAATGCTCGCTTTGTAAGG+TGG | 0.615936 | 3_2:+20616226 | Msa0398670:CDS |
TTTATGGAATTCTAGTCACA+GGG | 0.616797 | 3_2:+20617123 | Msa0398670:intron |
AAGATGTGCTTGATCATGCT+GGG | 0.617257 | 3_2:-20616310 | None:intergenic |
TATGAGGGATGATGATTCTG+AGG | 0.620873 | 3_2:+20617287 | Msa0398670:CDS |
TGAAAAGAGCTTGAGACCGG+AGG | 0.623003 | 3_2:+20614799 | Msa0398670:CDS |
TTCGGATGAGGACGAAGATG+AGG | 0.623505 | 3_2:+20617362 | Msa0398670:CDS |
TTATAACTTATAATACATGC+CGG | 0.624826 | 3_2:+20619214 | Msa0398670:three_prime_UTR |
TGGAGAACAATATTGTACGT+TGG | 0.625363 | 3_2:+20615448 | Msa0398670:CDS |
CAATTGTTGACTCAAGGCAA+AGG | 0.626176 | 3_2:+20616515 | Msa0398670:CDS |
AATCACAAGGACAGCTATCG+AGG | 0.634431 | 3_2:+20616437 | Msa0398670:CDS |
AGAGCTGGTGGTGGACGTAG+TGG | 0.639818 | 3_2:-20614923 | None:intergenic |
AAATCCTCCCGGCACCAAGT+GGG | 0.639942 | 3_2:+20617189 | Msa0398670:CDS |
GGAATCTCCAACTCCAATGG+TGG | 0.639997 | 3_2:-20614902 | None:intergenic |
GGCTGAAAGTCAGACTATCA+GGG | 0.640361 | 3_2:+20616686 | Msa0398670:intron |
GAATTCGACGACAAGGAAGA+GGG | 0.641254 | 3_2:-20616475 | None:intergenic |
AGGAAAGTCACAAATCCTGA+TGG | 0.643610 | 3_2:+20615471 | Msa0398670:CDS |
GGAAATATGCTCCAACTGAG+AGG | 0.643716 | 3_2:+20616748 | Msa0398670:CDS |
AAACTAAAGATAAGCCACTT+GGG | 0.644064 | 3_2:+20614879 | Msa0398670:CDS |
ACAAGCAGGGAATACAGAGG+AGG | 0.644875 | 3_2:-20619006 | None:intergenic |
AGACAAAATACCAACAAGCA+GGG | 0.651087 | 3_2:-20619019 | None:intergenic |
CCGATGAGAATTCGACGACA+AGG | 0.652415 | 3_2:-20616482 | None:intergenic |
GCATCAGTATGAATCAGAGG+AGG | 0.652612 | 3_2:+20614841 | Msa0398670:CDS |
TACAGACATTGATCCTGAGA+GGG | 0.652796 | 3_2:+20616564 | Msa0398670:CDS |
AATATGCTCCAACTGAGAGG+AGG | 0.659533 | 3_2:+20616751 | Msa0398670:CDS |
ATATGAAACTGAAGACGATG+AGG | 0.660309 | 3_2:+20617242 | Msa0398670:CDS |
TTACAGACATTGATCCTGAG+AGG | 0.665584 | 3_2:+20616563 | Msa0398670:CDS |
AAATACATCACGAATTTCCG+GGG | 0.669442 | 3_2:-20614583 | None:intergenic |
TCATCCCTCATACGAGAGCG+AGG | 0.670421 | 3_2:-20617276 | None:intergenic |
CTTACGAGTAAGAAGTACGT+TGG | 0.673929 | 3_2:-20616709 | None:intergenic |
AACACAGCGTCACTATGAGG+AGG | 0.677188 | 3_2:+20616983 | Msa0398670:CDS |
AAGCAGGGAATACAGAGGAG+GGG | 0.680526 | 3_2:-20619004 | None:intergenic |
GTAACCCACTTGGTGCCGGG+AGG | 0.688990 | 3_2:-20617193 | None:intergenic |
GACCAAAGAGCATCCCTCGT+AGG | 0.690217 | 3_2:+20617145 | Msa0398670:CDS |
CCTGTTGTAGAGATATCCTG+CGG | 0.694729 | 3_2:+20614760 | Msa0398670:intron |
GTTGTAGAGATATCCTGCGG+AGG | 0.703265 | 3_2:+20614763 | Msa0398670:intron |
CAGCAGCTAGAAGAAGCCTG+AGG | 0.712548 | 3_2:+20611796 | Msa0398670:CDS |
GGGAGGAACGATGACCTACG+AGG | 0.713672 | 3_2:-20617159 | None:intergenic |
CTTCGGAGATCAATCCGAGG+AGG | 0.714867 | 3_2:+20611296 | Msa0398670:CDS |
TCTCTTCGGAGATCAATCCG+AGG | 0.735019 | 3_2:+20611293 | Msa0398670:CDS |
GGAGGAACGATGACCTACGA+GGG | 0.757117 | 3_2:-20617158 | None:intergenic |
CCAACAAGCAGGGAATACAG+AGG | 0.758116 | 3_2:-20619009 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATAATAATAATAATTAAA+AGG | + | chr3_2:20612739-20612758 | Msa0398670:intron | 0.0% |
!! | TAAAAAAAATTATACGAATT+TGG | - | chr3_2:20612049-20612068 | None:intergenic | 10.0% |
!! | ATAATTAAAAGGAATAAGAA+AGG | - | chr3_2:20613541-20613560 | None:intergenic | 15.0% |
!! | AATCATATTAAAAACTTCTA+GGG | - | chr3_2:20614084-20614103 | None:intergenic | 15.0% |
!! | AAATCATATTAAAAACTTCT+AGG | - | chr3_2:20614085-20614104 | None:intergenic | 15.0% |
!!! | ACTCAGAATTTTATTTTTTT+TGG | + | chr3_2:20614499-20614518 | Msa0398670:intron | 15.0% |
!!! | TTTTGGAAAAAAAAATATAG+TGG | + | chr3_2:20614516-20614535 | Msa0398670:intron | 15.0% |
!! | TTTGGAAAAAAAAATATAGT+GGG | + | chr3_2:20614517-20614536 | Msa0398670:intron | 15.0% |
!! | TATATGTTATTGTTAAAATG+AGG | + | chr3_2:20614984-20615003 | Msa0398670:intron | 15.0% |
!!! | ATTTTTTGTTAGTTAAAAGT+TGG | + | chr3_2:20615052-20615071 | Msa0398670:intron | 15.0% |
!!! | TAATTTTAGATCTTTGTTAA+TGG | + | chr3_2:20615942-20615961 | Msa0398670:intron | 15.0% |
!! | AAAATATTTATCTTCAACTA+TGG | + | chr3_2:20617406-20617425 | Msa0398670:intron | 15.0% |
!! | CAATTAAACAAAGATAAAAT+TGG | - | chr3_2:20617511-20617530 | None:intergenic | 15.0% |
!!! | CAATTTTATCTTTGTTTAAT+TGG | + | chr3_2:20617509-20617528 | Msa0398670:intron | 15.0% |
!! | AAATATCTGTACAAAATATT+TGG | - | chr3_2:20617645-20617664 | None:intergenic | 15.0% |
!!! | AAATATTTTGTACAGATATT+TGG | + | chr3_2:20617644-20617663 | Msa0398670:intron | 15.0% |
!! | GAAATGCAAAAAAAAAAAAA+AGG | - | chr3_2:20618726-20618745 | None:intergenic | 15.0% |
!!! | TATTTTAAAATACCATCAAA+TGG | + | chr3_2:20618774-20618793 | Msa0398670:intron | 15.0% |
!!! | TTTTTTTTGTCTTTGAGAAA+AGG | + | chr3_2:20611134-20611153 | Msa0398670:five_prime_UTR | 20.0% |
!! | ATCGTATTGAAAATTTGAAA+TGG | + | chr3_2:20611501-20611520 | Msa0398670:intron | 20.0% |
!!! | AATTTGAAATGGTGAATTTT+TGG | + | chr3_2:20611512-20611531 | Msa0398670:intron | 20.0% |
!! | AAAAAAAAAAAAACTACCTC+AGG | - | chr3_2:20611815-20611834 | None:intergenic | 20.0% |
!!! | AAATTTTACAATGAAATTGC+TGG | + | chr3_2:20611912-20611931 | Msa0398670:intron | 20.0% |
!! | ATAATTAAAAGGTCTAAGAA+AGG | + | chr3_2:20612750-20612769 | Msa0398670:intron | 20.0% |
!! | GAATTAGAGTAATCTTTATA+TGG | - | chr3_2:20612926-20612945 | None:intergenic | 20.0% |
!!! | CTGTTTTTTAATAATAAGAG+AGG | - | chr3_2:20613595-20613614 | None:intergenic | 20.0% |
!! | AACAATAACATATAGAACAT+AGG | - | chr3_2:20614978-20614997 | None:intergenic | 20.0% |
!!! | GTGAATTTTGAAATGTTTAA+AGG | + | chr3_2:20615092-20615111 | Msa0398670:intron | 20.0% |
!! | TTGTTAAATTCTCATCATTT+AGG | - | chr3_2:20615184-20615203 | None:intergenic | 20.0% |
!!! | TTTAAAGTTTCCAATATCAT+GGG | + | chr3_2:20615336-20615355 | Msa0398670:CDS | 20.0% |
!!! | AAGAAAGATTTGGAATTAAA+TGG | - | chr3_2:20615725-20615744 | None:intergenic | 20.0% |
!! | TAATTCCAAATCTTTCTTAA+TGG | + | chr3_2:20615727-20615746 | Msa0398670:intron | 20.0% |
!!! | TTAAATGCCATTTCATAATT+AGG | - | chr3_2:20615990-20616009 | None:intergenic | 20.0% |
!! | AATATGTATTACTGTTGATA+TGG | + | chr3_2:20616008-20616027 | Msa0398670:intron | 20.0% |
!! | GAAATTATTCTGATCTTAAA+AGG | - | chr3_2:20616149-20616168 | None:intergenic | 20.0% |
!! | TTATGCATTAACATTAATGA+AGG | + | chr3_2:20617096-20617115 | Msa0398670:intron | 20.0% |
!!! | CATTAATGAAGGTTATTTTA+TGG | + | chr3_2:20617107-20617126 | Msa0398670:intron | 20.0% |
!!! | ATTGGCTATTTTTTAATTTC+CGG | + | chr3_2:20617527-20617546 | Msa0398670:intron | 20.0% |
!!! | TTGTTTTCTTATTTTCTTAG+AGG | + | chr3_2:20617936-20617955 | Msa0398670:intron | 20.0% |
!! | ATTAACAGAACAAAAAAACA+AGG | - | chr3_2:20618291-20618310 | None:intergenic | 20.0% |
!!! | TTCTTCTTTACATATCTTTT+AGG | + | chr3_2:20618319-20618338 | Msa0398670:intron | 20.0% |
!! | CAAAAGAGTAAGAATTTAAA+AGG | + | chr3_2:20618437-20618456 | Msa0398670:CDS | 20.0% |
!! | ATAAATCAGGTATTTATTCA+AGG | - | chr3_2:20618604-20618623 | None:intergenic | 20.0% |
!! | AAAAAAAAAAAAAAGGAGGA+AGG | - | chr3_2:20618719-20618738 | None:intergenic | 20.0% |
!! | ATGCAAAAAAAAAAAAAAGG+AGG | - | chr3_2:20618723-20618742 | None:intergenic | 20.0% |
!! | TATATCTTGAAAACTTGTAA+CGG | - | chr3_2:20618748-20618767 | None:intergenic | 20.0% |
!! | TTATAACTTATAATACATGC+CGG | + | chr3_2:20619214-20619233 | Msa0398670:three_prime_UTR | 20.0% |
!! | TATTCCTTTGTTTATGCATT+TGG | + | chr3_2:20611475-20611494 | Msa0398670:intron | 25.0% |
! | TCATTAATTAACCACATTGT+TGG | + | chr3_2:20611854-20611873 | Msa0398670:intron | 25.0% |
! | CATTAATTAACCACATTGTT+GGG | + | chr3_2:20611855-20611874 | Msa0398670:intron | 25.0% |
!!! | GCTGTTTTGATTAAGTTTTT+TGG | + | chr3_2:20611883-20611902 | Msa0398670:intron | 25.0% |
!!! | TTTATTTCTAAGAAACCTAG+TGG | - | chr3_2:20612205-20612224 | None:intergenic | 25.0% |
!! | TTCAACTCAATTCTTTTAGA+TGG | + | chr3_2:20612293-20612312 | Msa0398670:intron | 25.0% |
!! | TCAACTCAATTCTTTTAGAT+GGG | + | chr3_2:20612294-20612313 | Msa0398670:intron | 25.0% |
!!! | AAAATAATTGAGTTGACACT+TGG | + | chr3_2:20612998-20613017 | Msa0398670:intron | 25.0% |
!!! | CACAAAAATAATTGAGTTGA+AGG | - | chr3_2:20612994-20613013 | None:intergenic | 25.0% |
! | AAAGGAATAAGAAAGGAATT+GGG | - | chr3_2:20613534-20613553 | None:intergenic | 25.0% |
! | AAAAGGAATAAGAAAGGAAT+TGG | - | chr3_2:20613535-20613554 | None:intergenic | 25.0% |
!!! | ATAATAGAATCGGTTACTTT+TGG | - | chr3_2:20613890-20613909 | None:intergenic | 25.0% |
! | TTCTCATGGAATAATAGAAT+CGG | - | chr3_2:20613900-20613919 | None:intergenic | 25.0% |
!! | AAATTTGCATGTTTTTCTCA+TGG | - | chr3_2:20613914-20613933 | None:intergenic | 25.0% |
! | TAGATATTATGAATTCCCAA+GGG | - | chr3_2:20614199-20614218 | None:intergenic | 25.0% |
! | GTAATGATTATATCTATGTC+CGG | + | chr3_2:20614311-20614330 | Msa0398670:intron | 25.0% |
!! | TCATTATTTATTTGATGGGT+TGG | + | chr3_2:20614334-20614353 | Msa0398670:intron | 25.0% |
! | AAATAAAATTCTGAGTCTCA+AGG | - | chr3_2:20614495-20614514 | None:intergenic | 25.0% |
! | TTGAGAAATTTCTGATGTTA+TGG | + | chr3_2:20615145-20615164 | Msa0398670:intron | 25.0% |
! | TGATGAGAATTTAACAAGTT+TGG | + | chr3_2:20615187-20615206 | Msa0398670:intron | 25.0% |
! | AATGTGTTCTATTTGTAGTT+AGG | - | chr3_2:20615260-20615279 | None:intergenic | 25.0% |
!! | GTTTAAAGTTTCCAATATCA+TGG | + | chr3_2:20615335-20615354 | Msa0398670:CDS | 25.0% |
!!! | TCATATGTTTTAGGATCAAA+TGG | - | chr3_2:20615375-20615394 | None:intergenic | 25.0% |
!! | TCTTCTTCTTCATATGTTTT+AGG | - | chr3_2:20615384-20615403 | None:intergenic | 25.0% |
!! | TATTACAACTAAGAGTGTAA+AGG | - | chr3_2:20615599-20615618 | None:intergenic | 25.0% |
! | CTTTAAATATGATTCATGAG+AGG | - | chr3_2:20615912-20615931 | None:intergenic | 25.0% |
! | GAAATAGCCTAATTATGAAA+TGG | + | chr3_2:20615980-20615999 | Msa0398670:intron | 25.0% |
! | AAAAAATCTTGTTCATGATC+AGG | + | chr3_2:20616197-20616216 | Msa0398670:intron | 25.0% |
! | TTTGGATGAGGTATAAATTT+AGG | + | chr3_2:20616806-20616825 | Msa0398670:intron | 25.0% |
! | TTGGATGAGGTATAAATTTA+GGG | + | chr3_2:20616807-20616826 | Msa0398670:intron | 25.0% |
!!! | AAAGGAGCATTGATAAATAA+TGG | - | chr3_2:20616924-20616943 | None:intergenic | 25.0% |
!!! | GGTATTATTATTTTGTCTCT+AGG | + | chr3_2:20617055-20617074 | Msa0398670:intron | 25.0% |
! | AACAGTCAATAATAGGTATT+GGG | - | chr3_2:20618035-20618054 | None:intergenic | 25.0% |
! | AGTTTACCAATTCACTTTAA+AGG | - | chr3_2:20618094-20618113 | None:intergenic | 25.0% |
! | AAATGTTAAGAGCAATATTC+AGG | - | chr3_2:20618175-20618194 | None:intergenic | 25.0% |
!! | ACATTTCCATTTTGTTCATT+TGG | + | chr3_2:20618189-20618208 | Msa0398670:intron | 25.0% |
!! | CATTTCCATTTTGTTCATTT+GGG | + | chr3_2:20618190-20618209 | Msa0398670:intron | 25.0% |
! | AAAAAAACAAGGATAGTGTT+AGG | - | chr3_2:20618280-20618299 | None:intergenic | 25.0% |
! | GAGTAAGAATTTAAAAGGTA+AGG | + | chr3_2:20618442-20618461 | Msa0398670:CDS | 25.0% |
! | GAAAATGAAAATCTGACTTA+CGG | - | chr3_2:20618573-20618592 | None:intergenic | 25.0% |
! | AAAGTAGTTATCATACATGT+CGG | + | chr3_2:20619160-20619179 | Msa0398670:three_prime_UTR | 25.0% |
!! | GTTTTCAACACTTTATATTC+CGG | - | chr3_2:20619236-20619255 | None:intergenic | 25.0% |
! | AATCTTACAGAATTGAGTTG+AGG | - | chr3_2:20611357-20611376 | None:intergenic | 30.0% |
TCTTCCAAATGCATAAACAA+AGG | - | chr3_2:20611482-20611501 | None:intergenic | 30.0% | |
!!! | TTTGATTAAGTTTTTTGGCG+CGG | + | chr3_2:20611888-20611907 | Msa0398670:intron | 30.0% |
TCTACACAACTAATAAAACC+CGG | - | chr3_2:20611970-20611989 | None:intergenic | 30.0% | |
TCATGTAAGTACAACTTAGT+TGG | + | chr3_2:20612095-20612114 | Msa0398670:intron | 30.0% | |
ATCTTAAGCTTGGAGAAATA+AGG | - | chr3_2:20612170-20612189 | None:intergenic | 30.0% | |
TTCTCGAGGAATAATAGAAT+CGG | + | chr3_2:20612440-20612459 | Msa0398670:intron | 30.0% | |
!! | ATAATAGAATCGGCTACTTT+TGG | + | chr3_2:20612450-20612469 | Msa0398670:intron | 30.0% |
! | TGCAAGTTAATTTTTCCTGA+TGG | + | chr3_2:20612632-20612651 | Msa0398670:intron | 30.0% |
AAAAGGTCTAAGAAAGGAAT+TGG | + | chr3_2:20612756-20612775 | Msa0398670:intron | 30.0% | |
AAAGGTCTAAGAAAGGAATT+GGG | + | chr3_2:20612757-20612776 | Msa0398670:intron | 30.0% | |
!! | GAGGACTCTTTATTTCTAAA+AGG | - | chr3_2:20613181-20613200 | None:intergenic | 30.0% |
TTTAGAAATAAAGAGTCCTC+TGG | + | chr3_2:20613181-20613200 | Msa0398670:intron | 30.0% | |
ATTAAAAAACAGCAGTGAAC+TGG | + | chr3_2:20613603-20613622 | Msa0398670:intron | 30.0% | |
!!! | TGCAAGTTATTTTTTCCTGA+TGG | - | chr3_2:20613714-20613733 | None:intergenic | 30.0% |
AGATATTATGAATTCCCAAG+GGG | - | chr3_2:20614198-20614217 | None:intergenic | 30.0% | |
GTAGATATTATGAATTCCCA+AGG | - | chr3_2:20614200-20614219 | None:intergenic | 30.0% | |
!! | TTTGTCACTGCAATTGATTT+TGG | + | chr3_2:20614275-20614294 | Msa0398670:intron | 30.0% |
TCCGGTCATTATTTATTTGA+TGG | + | chr3_2:20614329-20614348 | Msa0398670:intron | 30.0% | |
CCCATCAAATAAATAATGAC+CGG | - | chr3_2:20614333-20614352 | None:intergenic | 30.0% | |
CCGGTCATTATTTATTTGAT+GGG | + | chr3_2:20614330-20614349 | Msa0398670:intron | 30.0% | |
TCTTAAACTAGATGACCAAA+TGG | + | chr3_2:20614415-20614434 | Msa0398670:intron | 30.0% | |
!! | GTCATTTTCTATGTTCCATT+TGG | - | chr3_2:20614433-20614452 | None:intergenic | 30.0% |
ATTCAAATGTGAGTGTTAGT+TGG | + | chr3_2:20614667-20614686 | Msa0398670:intron | 30.0% | |
AAAACTAAAGATAAGCCACT+TGG | + | chr3_2:20614878-20614897 | Msa0398670:CDS | 30.0% | |
AAACTAAAGATAAGCCACTT+GGG | + | chr3_2:20614879-20614898 | Msa0398670:CDS | 30.0% | |
GAACACCAACATATCTTTAA+GGG | + | chr3_2:20615114-20615133 | Msa0398670:intron | 30.0% | |
AACTTCCCTTAAAGATATGT+TGG | - | chr3_2:20615122-20615141 | None:intergenic | 30.0% | |
GAAATTTCTGATGTTATGGT+TGG | + | chr3_2:20615149-20615168 | Msa0398670:intron | 30.0% | |
! | ACGTTATGTTGAGTAGATTT+TGG | + | chr3_2:20615222-20615241 | Msa0398670:intron | 30.0% |
!! | GAGTAGATTTTGGCATATAT+TGG | + | chr3_2:20615232-20615251 | Msa0398670:intron | 30.0% |
!!! | GTTTTAGGATCAAATGGTTT+TGG | - | chr3_2:20615369-20615388 | None:intergenic | 30.0% |
ACCTTTGTAACTGATGAATT+TGG | + | chr3_2:20615405-20615424 | Msa0398670:CDS | 30.0% | |
TCCAAATTCATCAGTTACAA+AGG | - | chr3_2:20615409-20615428 | None:intergenic | 30.0% | |
! | TTTCCTTCTTTTACATCCAT+GGG | + | chr3_2:20615564-20615583 | Msa0398670:intron | 30.0% |
AAATGGTTTAAATGTAGACG+TGG | - | chr3_2:20615708-20615727 | None:intergenic | 30.0% | |
CCAAACCATTAAGAAAGATT+TGG | - | chr3_2:20615735-20615754 | None:intergenic | 30.0% | |
CCAAATCTTTCTTAATGGTT+TGG | + | chr3_2:20615732-20615751 | Msa0398670:intron | 30.0% | |
! | ATTCTTCTCCCTTTTACTAA+TGG | + | chr3_2:20615772-20615791 | Msa0398670:intron | 30.0% |
AGACCAAACCATTAGTAAAA+GGG | - | chr3_2:20615783-20615802 | None:intergenic | 30.0% | |
TAGACCAAACCATTAGTAAA+AGG | - | chr3_2:20615784-20615803 | None:intergenic | 30.0% | |
!!! | CTGTTTTTGAGTAAGAGTAT+TGG | + | chr3_2:20616079-20616098 | Msa0398670:intron | 30.0% |
!! | AGTATTGGCAAAATGAGTTA+TGG | + | chr3_2:20616094-20616113 | Msa0398670:intron | 30.0% |
! | GTATTGGCAAAATGAGTTAT+GGG | + | chr3_2:20616095-20616114 | Msa0398670:intron | 30.0% |
! | GAAGCATTCAGTTATTGATT+GGG | + | chr3_2:20616256-20616275 | Msa0398670:CDS | 30.0% |
GGTGAATTTCATTATTCTCA+TGG | + | chr3_2:20616350-20616369 | Msa0398670:intron | 30.0% | |
! | GATTTACTATTTCTCCTCAA+TGG | + | chr3_2:20616383-20616402 | Msa0398670:intron | 30.0% |
GGAAAAAGAAGAAAAGGAAA+AGG | + | chr3_2:20616585-20616604 | Msa0398670:CDS | 30.0% | |
TAAAAGACAATAGTGTCTCT+AGG | - | chr3_2:20616840-20616859 | None:intergenic | 30.0% | |
!! | CATTTGCTGCAATATTTTCT+AGG | + | chr3_2:20616869-20616888 | Msa0398670:intron | 30.0% |
ACGAATTATGAATGCTAAGA+AGG | + | chr3_2:20617034-20617053 | Msa0398670:CDS | 30.0% | |
! | TTTTATGGAATTCTAGTCAC+AGG | + | chr3_2:20617122-20617141 | Msa0398670:intron | 30.0% |
TTTATGGAATTCTAGTCACA+GGG | + | chr3_2:20617123-20617142 | Msa0398670:intron | 30.0% | |
AGAACAAGAAAATGATGCTT+CGG | + | chr3_2:20617344-20617363 | Msa0398670:CDS | 30.0% | |
TGAACCACAATAAATGGTAA+AGG | - | chr3_2:20617482-20617501 | None:intergenic | 30.0% | |
TTGTTGTGAACCACAATAAA+TGG | - | chr3_2:20617488-20617507 | None:intergenic | 30.0% | |
! | ATGTGTGCAATATTTTGCAT+AGG | + | chr3_2:20617584-20617603 | Msa0398670:intron | 30.0% |
GCAATCAAATGTTAATGGTT+TGG | - | chr3_2:20617756-20617775 | None:intergenic | 30.0% | |
AAGCAGCAATCAAATGTTAA+TGG | - | chr3_2:20617761-20617780 | None:intergenic | 30.0% | |
! | TTAACATTTGATTGCTGCTT+AGG | + | chr3_2:20617761-20617780 | Msa0398670:intron | 30.0% |
TGCTTAGGATTCAAAAGAAA+GGG | + | chr3_2:20617776-20617795 | Msa0398670:intron | 30.0% | |
!! | AATAATGATTAGGTTGGTTC+TGG | - | chr3_2:20617809-20617828 | None:intergenic | 30.0% |
AGAACCAACCTAATCATTAT+TGG | + | chr3_2:20617808-20617827 | Msa0398670:intron | 30.0% | |
GAACCAACCTAATCATTATT+GGG | + | chr3_2:20617809-20617828 | Msa0398670:intron | 30.0% | |
AAACCAACCCAATAATGATT+AGG | - | chr3_2:20617819-20617838 | None:intergenic | 30.0% | |
!!! | TTATTGGGTTGGTTTTAGTT+AGG | + | chr3_2:20617824-20617843 | Msa0398670:intron | 30.0% |
CAACAGTCAATAATAGGTAT+TGG | - | chr3_2:20618036-20618055 | None:intergenic | 30.0% | |
TCAACACAACAGTCAATAAT+AGG | - | chr3_2:20618042-20618061 | None:intergenic | 30.0% | |
!! | CTTTGTCCTTTAAAGTGAAT+TGG | + | chr3_2:20618085-20618104 | Msa0398670:intron | 30.0% |
CAAAACCCAAATGAACAAAA+TGG | - | chr3_2:20618198-20618217 | None:intergenic | 30.0% | |
ACAAAGTTTAACAAGGAACT+TGG | - | chr3_2:20618224-20618243 | None:intergenic | 30.0% | |
ACTATTTCATGTTTACTTGC+AGG | + | chr3_2:20618406-20618425 | Msa0398670:intron | 30.0% | |
CTATTTCATGTTTACTTGCA+GGG | + | chr3_2:20618407-20618426 | Msa0398670:intron | 30.0% | |
ATTTAAAAGGTAAGGCCAAA+AGG | + | chr3_2:20618450-20618469 | Msa0398670:CDS | 30.0% | |
TGTCAGACATAATTGTCATT+CGG | - | chr3_2:20618532-20618551 | None:intergenic | 30.0% | |
CAGGTATTTATTCAAGGTTA+AGG | - | chr3_2:20618598-20618617 | None:intergenic | 30.0% | |
AGGACACATAATCATAAATC+AGG | - | chr3_2:20618617-20618636 | None:intergenic | 30.0% | |
! | CTTTTGCTAGCAAAAACATA+TGG | - | chr3_2:20618657-20618676 | None:intergenic | 30.0% |
!! | TATGTTTTTGCTAGCAAAAG+AGG | + | chr3_2:20618657-20618676 | Msa0398670:intron | 30.0% |
!! | ATGTTTTTGCTAGCAAAAGA+GGG | + | chr3_2:20618658-20618677 | Msa0398670:intron | 30.0% |
AAAAAAAAAGGAGGAAGGAA+GGG | - | chr3_2:20618714-20618733 | None:intergenic | 30.0% | |
AAAAAAAAAAGGAGGAAGGA+AGG | - | chr3_2:20618715-20618734 | None:intergenic | 30.0% | |
TTTCAAACGTGAAAATCCTA+CGG | - | chr3_2:20618848-20618867 | None:intergenic | 30.0% | |
! | AAATTTACTGAGCTTTTCCA+GGG | + | chr3_2:20618865-20618884 | Msa0398670:intron | 30.0% |
! | ATGATTCAGGATTTTGCAAT+TGG | + | chr3_2:20618926-20618945 | Msa0398670:intron | 30.0% |
! | TTTTGCAATTGGAATTCAGA+AGG | + | chr3_2:20618937-20618956 | Msa0398670:three_prime_UTR | 30.0% |
!! | CACAAGTTCTAAGCTCAAAA+CGG | + | chr3_2:20611175-20611194 | Msa0398670:five_prime_UTR | 35.0% |
TTGAGGATTGGATTCATGTT+CGG | - | chr3_2:20611340-20611359 | None:intergenic | 35.0% | |
!! | TACAGAATTGAGTTGAGGAT+TGG | - | chr3_2:20611352-20611371 | None:intergenic | 35.0% |
!!! | TGGTGAATTTTTGGTATTGC+AGG | + | chr3_2:20611521-20611540 | Msa0398670:intron | 35.0% |
!! | TTTTTGGTATTGCAGGATGA+AGG | + | chr3_2:20611528-20611547 | Msa0398670:intron | 35.0% |
AATTAACCACATTGTTGGGT+TGG | + | chr3_2:20611859-20611878 | Msa0398670:intron | 35.0% | |
TATGTGGTTGCTAATTGAAC+CGG | + | chr3_2:20611948-20611967 | Msa0398670:intron | 35.0% | |
TTGGAGAAATAAGGAATCCT+GGG | - | chr3_2:20612161-20612180 | None:intergenic | 35.0% | |
CTTAGAAATAAAGAGTCCTC+TGG | + | chr3_2:20612213-20612232 | Msa0398670:intron | 35.0% | |
! | ACTCAATTCTTTTAGATGGG+TGG | + | chr3_2:20612297-20612316 | Msa0398670:intron | 35.0% |
! | ATTCTTTTAGATGGGTGGAT+TGG | + | chr3_2:20612302-20612321 | Msa0398670:intron | 35.0% |
! | AAATTTGCACGTTTTTCTCG+AGG | + | chr3_2:20612426-20612445 | Msa0398670:intron | 35.0% |
TTTCTCTTTCTCTCATTCTC+TGG | + | chr3_2:20612584-20612603 | Msa0398670:intron | 35.0% | |
TTCTCTTTCTCTCATTCTCT+GGG | + | chr3_2:20612585-20612604 | Msa0398670:intron | 35.0% | |
!!! | CACTAGGAATATTGGTTTTG+TGG | + | chr3_2:20613113-20613132 | Msa0398670:intron | 35.0% |
! | CAAGAGCATAAGAATCAAGA+AGG | - | chr3_2:20613213-20613232 | None:intergenic | 35.0% |
CACTCTATACAATCTACACA+AGG | - | chr3_2:20613299-20613318 | None:intergenic | 35.0% | |
TTTCAAATCTGACAAGCTTC+AGG | + | chr3_2:20613373-20613392 | Msa0398670:intron | 35.0% | |
AATACTTTCTTAAGCCCAGA+CGG | + | chr3_2:20613508-20613527 | Msa0398670:intron | 35.0% | |
GGAATTGAAAACGGCAATTA+GGG | - | chr3_2:20613673-20613692 | None:intergenic | 35.0% | |
TGGAATTGAAAACGGCAATT+AGG | - | chr3_2:20613674-20613693 | None:intergenic | 35.0% | |
GCAGCATATGGAATTGAAAA+CGG | - | chr3_2:20613682-20613701 | None:intergenic | 35.0% | |
ATAAAGCGAGTTCTTGATGT+GGG | - | chr3_2:20614006-20614025 | None:intergenic | 35.0% | |
GATATTATGAATTCCCAAGG+GGG | - | chr3_2:20614197-20614216 | None:intergenic | 35.0% | |
CAGCAGATGAAGCATAAAAT+AGG | - | chr3_2:20614222-20614241 | None:intergenic | 35.0% | |
AATTGTGCAAGCTGAATCTT+GGG | - | chr3_2:20614455-20614474 | None:intergenic | 35.0% | |
AAATTGTGCAAGCTGAATCT+TGG | - | chr3_2:20614456-20614475 | None:intergenic | 35.0% | |
CAAAGATCAGACTCATGATT+TGG | + | chr3_2:20614554-20614573 | Msa0398670:CDS | 35.0% | |
AAATACATCACGAATTTCCG+GGG | - | chr3_2:20614586-20614605 | None:intergenic | 35.0% | |
CAAATACATCACGAATTTCC+GGG | - | chr3_2:20614587-20614606 | None:intergenic | 35.0% | |
CCAAATACATCACGAATTTC+CGG | - | chr3_2:20614588-20614607 | None:intergenic | 35.0% | |
!!! | TGGTGATTTTGATGATGAAG+AGG | + | chr3_2:20614605-20614624 | Msa0398670:CDS | 35.0% |
!!! | TGATTTTGATGATGAAGAGG+AGG | + | chr3_2:20614608-20614627 | Msa0398670:CDS | 35.0% |
GGAACACCAACATATCTTTA+AGG | + | chr3_2:20615113-20615132 | Msa0398670:intron | 35.0% | |
TGGAGAACAATATTGTACGT+TGG | + | chr3_2:20615448-20615467 | Msa0398670:CDS | 35.0% | |
AGAACAATATTGTACGTTGG+AGG | + | chr3_2:20615451-20615470 | Msa0398670:CDS | 35.0% | |
! | CTTTCCTTCTTTTACATCCA+TGG | + | chr3_2:20615563-20615582 | Msa0398670:intron | 35.0% |
!! | AAAGGCTTTATGGGATTTTG+TGG | - | chr3_2:20615627-20615646 | None:intergenic | 35.0% |
! | TCTCCCTTTTACTAATGGTT+TGG | + | chr3_2:20615777-20615796 | Msa0398670:intron | 35.0% |
AACTTAAACCTTTCCCTGTT+AGG | + | chr3_2:20615850-20615869 | Msa0398670:intron | 35.0% | |
TTTATTGACCAAGCCTAACA+GGG | - | chr3_2:20615866-20615885 | None:intergenic | 35.0% | |
ATTTATTGACCAAGCCTAAC+AGG | - | chr3_2:20615867-20615886 | None:intergenic | 35.0% | |
GCTTGGTCAATAAATGAATC+AGG | + | chr3_2:20615872-20615891 | Msa0398670:intron | 35.0% | |
!! | GGAAGCATTCAGTTATTGAT+TGG | + | chr3_2:20616255-20616274 | Msa0398670:CDS | 35.0% |
! | TCTTTTCCTTAGACATGGAA+AGG | + | chr3_2:20616329-20616348 | Msa0398670:CDS | 35.0% |
AATTCACCTTTCCATGTCTA+AGG | - | chr3_2:20616338-20616357 | None:intergenic | 35.0% | |
ACTATGTGCACTTGTTTACA+GGG | + | chr3_2:20616406-20616425 | Msa0398670:intron | 35.0% | |
!! | TAACTGCAATTGTTGACTCA+AGG | + | chr3_2:20616509-20616528 | Msa0398670:CDS | 35.0% |
! | TTTTCTTCTTTTTCCCTCTC+AGG | - | chr3_2:20616580-20616599 | None:intergenic | 35.0% |
TGAGAGGGAAAAAGAAGAAA+AGG | + | chr3_2:20616579-20616598 | Msa0398670:CDS | 35.0% | |
CCTGAAAATGATAGGGAAAT+TGG | - | chr3_2:20616668-20616687 | None:intergenic | 35.0% | |
! | CCAATTTCCCTATCATTTTC+AGG | + | chr3_2:20616665-20616684 | Msa0398670:intron | 35.0% |
CTTTCAGCCTGAAAATGATA+GGG | - | chr3_2:20616675-20616694 | None:intergenic | 35.0% | |
ACTTTCAGCCTGAAAATGAT+AGG | - | chr3_2:20616676-20616695 | None:intergenic | 35.0% | |
! | TATCAATGCTCCTTTTCTTC+AGG | + | chr3_2:20616929-20616948 | Msa0398670:intron | 35.0% |
TCATAATTCGTTTCTCTGCT+CGG | - | chr3_2:20617025-20617044 | None:intergenic | 35.0% | |
ATATGAAACTGAAGACGATG+AGG | + | chr3_2:20617242-20617261 | Msa0398670:CDS | 35.0% | |
! | TGCACTGATAGAAAGTAAAC+TGG | - | chr3_2:20617459-20617478 | None:intergenic | 35.0% |
TGCACCTTTACCATTTATTG+TGG | + | chr3_2:20617475-20617494 | Msa0398670:intron | 35.0% | |
!!! | GGCTATTTTTTAATTTCCGG+CGG | + | chr3_2:20617530-20617549 | Msa0398670:intron | 35.0% |
TGTCTACTTGTCAGTTGTTA+AGG | + | chr3_2:20617613-20617632 | Msa0398670:intron | 35.0% | |
TTATGTGCCTTGATTCATGT+CGG | + | chr3_2:20617671-20617690 | Msa0398670:intron | 35.0% | |
CTGCTTAGGATTCAAAAGAA+AGG | + | chr3_2:20617775-20617794 | Msa0398670:intron | 35.0% | |
CAACCCAATAATGATTAGGT+TGG | - | chr3_2:20617815-20617834 | None:intergenic | 35.0% | |
CAACCTAATCATTATTGGGT+TGG | + | chr3_2:20617813-20617832 | Msa0398670:intron | 35.0% | |
! | AAGAGAGTATGATGAGAAAC+CGG | + | chr3_2:20617868-20617887 | Msa0398670:intron | 35.0% |
! | ACCGTTGATGAGAAAAACAA+CGG | + | chr3_2:20617973-20617992 | Msa0398670:intron | 35.0% |
!!! | ACCGTTGTTTTTCTCATCAA+CGG | - | chr3_2:20617977-20617996 | None:intergenic | 35.0% |
GTAATGCTAACAAATCATGG+AGG | - | chr3_2:20618013-20618032 | None:intergenic | 35.0% | |
TGGGTAATGCTAACAAATCA+TGG | - | chr3_2:20618016-20618035 | None:intergenic | 35.0% | |
CACGGAAACAAAGTTTAACA+AGG | - | chr3_2:20618231-20618250 | None:intergenic | 35.0% | |
! | CTTGTTAAACTTTGTTTCCG+TGG | + | chr3_2:20618229-20618248 | Msa0398670:intron | 35.0% |
!! | ACCAATAGACAAAAGTACCA+CGG | - | chr3_2:20618249-20618268 | None:intergenic | 35.0% |
TGGTTTATCATCTCATGACA+AGG | - | chr3_2:20618637-20618656 | None:intergenic | 35.0% | |
AAAAAAAAGGAGGAAGGAAG+GGG | - | chr3_2:20618713-20618732 | None:intergenic | 35.0% | |
CATACAACAGACACATATGA+TGG | - | chr3_2:20618806-20618825 | None:intergenic | 35.0% | |
CATCATATGTGTCTGTTGTA+TGG | + | chr3_2:20618804-20618823 | Msa0398670:intron | 35.0% | |
! | GAAATTTACTGAGCTTTTCC+AGG | + | chr3_2:20618864-20618883 | Msa0398670:intron | 35.0% |
!!! | TGCTTTTTCCTCTATGATTC+AGG | + | chr3_2:20618913-20618932 | Msa0398670:intron | 35.0% |
TGCAAAATCCTGAATCATAG+AGG | - | chr3_2:20618924-20618943 | None:intergenic | 35.0% | |
TCAGAAGGAAAAATGCTCTT+TGG | + | chr3_2:20618952-20618971 | Msa0398670:three_prime_UTR | 35.0% | |
AGACAAAATACCAACAAGCA+GGG | - | chr3_2:20619022-20619041 | None:intergenic | 35.0% | |
CTGTTGATCACTGTATTTCT+TGG | + | chr3_2:20619049-20619068 | Msa0398670:three_prime_UTR | 35.0% | |
TTTCTACGCTCTCTCTGTTT+GGG | - | chr3_2:20611234-20611253 | None:intergenic | 40.0% | |
! | TTTTCTACGCTCTCTCTGTT+TGG | - | chr3_2:20611235-20611254 | None:intergenic | 40.0% |
! | ACAGAGAGAGCGTAGAAAAA+TGG | + | chr3_2:20611236-20611255 | Msa0398670:exon | 40.0% |
! | CAGAGAGAGCGTAGAAAAAT+GGG | + | chr3_2:20611237-20611256 | Msa0398670:exon | 40.0% |
! | AGAGAGAGCGTAGAAAAATG+GGG | + | chr3_2:20611238-20611257 | Msa0398670:exon | 40.0% |
CAGATGATGCAGAATCTCTT+CGG | + | chr3_2:20611279-20611298 | Msa0398670:CDS | 40.0% | |
AAGTTCATCTTCTTCCTCCT+CGG | - | chr3_2:20611313-20611332 | None:intergenic | 40.0% | |
TGTTGTTACCAGTAAGCGTA+GGG | + | chr3_2:20611728-20611747 | Msa0398670:CDS | 40.0% | |
! | TGGATCTGATGATGATGAAC+AGG | + | chr3_2:20611764-20611783 | Msa0398670:CDS | 40.0% |
CAATGAAATTGCTGGAGAAG+CGG | + | chr3_2:20611920-20611939 | Msa0398670:intron | 40.0% | |
ATGTGGTTGCTAATTGAACC+GGG | + | chr3_2:20611949-20611968 | Msa0398670:intron | 40.0% | |
AGTGTATCTGCAACGTAAAG+TGG | + | chr3_2:20612002-20612021 | Msa0398670:intron | 40.0% | |
TGCAAAGACGATGATATGCA+TGG | + | chr3_2:20612122-20612141 | Msa0398670:intron | 40.0% | |
GCAAAGACGATGATATGCAT+GGG | + | chr3_2:20612123-20612142 | Msa0398670:intron | 40.0% | |
CTTGGAGAAATAAGGAATCC+TGG | - | chr3_2:20612162-20612181 | None:intergenic | 40.0% | |
AGACTCACACATCTTAAGCT+TGG | - | chr3_2:20612180-20612199 | None:intergenic | 40.0% | |
! | CAAGAGCATAAGAATCGAGA+AGG | - | chr3_2:20612245-20612264 | None:intergenic | 40.0% |
! | ATAAAGCCAGTCCTTGTTGT+GGG | + | chr3_2:20612334-20612353 | Msa0398670:intron | 40.0% |
AAAACGTGCAAATTTCACCC+TGG | - | chr3_2:20612421-20612440 | None:intergenic | 40.0% | |
ATAGGAGATTCTAGGTTGCA+AGG | - | chr3_2:20612532-20612551 | None:intergenic | 40.0% | |
GGAGCATAGGGAATTGAAAA+CGG | + | chr3_2:20612664-20612683 | Msa0398670:intron | 40.0% | |
GTGTGGTTGGAAATGAAACT+GGG | - | chr3_2:20613462-20613481 | None:intergenic | 40.0% | |
AGCGTGAGACTGAAAATTTG+TGG | + | chr3_2:20613027-20613046 | Msa0398670:intron | 40.0% | |
AACTCGCAAAATGGTTCAAC+GGG | - | chr3_2:20613067-20613086 | None:intergenic | 40.0% | |
CAACTCGCAAAATGGTTCAA+CGG | - | chr3_2:20613068-20613087 | None:intergenic | 40.0% | |
CAGACTCACACTAGGAATAT+TGG | + | chr3_2:20613105-20613124 | Msa0398670:intron | 40.0% | |
! | GGACGAAAGTATGTCTCATA+AGG | - | chr3_2:20613412-20613431 | None:intergenic | 40.0% |
ATACACATGACTGACGACAA+AGG | - | chr3_2:20613440-20613459 | None:intergenic | 40.0% | |
TTGTCGTCAGTCATGTGTAT+CGG | + | chr3_2:20613440-20613459 | Msa0398670:intron | 40.0% | |
GTGTGGTTGGAAATGAAACT+GGG | + | chr3_2:20613462-20613481 | Msa0398670:intron | 40.0% | |
ATTTCTTGACCTGAACATGC+TGG | - | chr3_2:20613488-20613507 | None:intergenic | 40.0% | |
AAAACAGCAGTGAACTGGTT+TGG | + | chr3_2:20613608-20613627 | Msa0398670:intron | 40.0% | |
! | AAACAGCAGTGAACTGGTTT+GGG | + | chr3_2:20613609-20613628 | Msa0398670:intron | 40.0% |
AAGAGGAATATTGGGCACTT+GGG | - | chr3_2:20613635-20613654 | None:intergenic | 40.0% | |
TGGTTAGAAGATGCAGCATA+TGG | - | chr3_2:20613694-20613713 | None:intergenic | 40.0% | |
GCTTCTTTCTCTCATTCTCT+GGG | - | chr3_2:20613761-20613780 | None:intergenic | 40.0% | |
TGCTTCTTTCTCTCATTCTC+TGG | - | chr3_2:20613762-20613781 | None:intergenic | 40.0% | |
AAAACATGCAAATTTCGCCC+TGG | + | chr3_2:20613919-20613938 | Msa0398670:intron | 40.0% | |
TAAAGCGAGTTCTTGATGTG+GGG | - | chr3_2:20614005-20614024 | None:intergenic | 40.0% | |
CATAAAGCGAGTTCTTGATG+TGG | - | chr3_2:20614007-20614026 | None:intergenic | 40.0% | |
!!! | TGTCATTTTTTTTGCCCCCT+TGG | + | chr3_2:20614180-20614199 | Msa0398670:intron | 40.0% |
!!! | GTCATTTTTTTTGCCCCCTT+GGG | + | chr3_2:20614181-20614200 | Msa0398670:intron | 40.0% |
GTCTGATCTTTGTCATCTCT+GGG | - | chr3_2:20614546-20614565 | None:intergenic | 40.0% | |
AGTCTGATCTTTGTCATCTC+TGG | - | chr3_2:20614547-20614566 | None:intergenic | 40.0% | |
CCGGAAATTCGTGATGTATT+TGG | + | chr3_2:20614585-20614604 | Msa0398670:CDS | 40.0% | |
! | TGATGATGAAGAGGAGGATA+TGG | + | chr3_2:20614614-20614633 | Msa0398670:CDS | 40.0% |
GATGATGAAGAGGAGGATAT+GGG | + | chr3_2:20614615-20614634 | Msa0398670:CDS | 40.0% | |
ATGATGAAGAGGAGGATATG+GGG | + | chr3_2:20614616-20614635 | Msa0398670:CDS | 40.0% | |
CTATGAAAAGAGCTTGAGAC+CGG | + | chr3_2:20614796-20614815 | Msa0398670:CDS | 40.0% | |
TCATCAGCAAGTATATCCTC+CGG | - | chr3_2:20614818-20614837 | None:intergenic | 40.0% | |
! | AGAGCATCAGTATGAATCAG+AGG | + | chr3_2:20614838-20614857 | Msa0398670:CDS | 40.0% |
CACAAATGAGAGGCGATTAT+AGG | - | chr3_2:20615301-20615320 | None:intergenic | 40.0% | |
ATAATCGCCTCTCATTTGTG+TGG | + | chr3_2:20615301-20615320 | Msa0398670:intron | 40.0% | |
TGGATCAACTCCCATGATAT+TGG | - | chr3_2:20615349-20615368 | None:intergenic | 40.0% | |
AGGAAAGTCACAAATCCTGA+TGG | + | chr3_2:20615471-20615490 | Msa0398670:CDS | 40.0% | |
CTTCCCATGGATGTAAAAGA+AGG | - | chr3_2:20615570-20615589 | None:intergenic | 40.0% | |
! | TCTTTTACATCCATGGGAAG+TGG | + | chr3_2:20615570-20615589 | Msa0398670:intron | 40.0% |
! | CTAGTGGTCAAAGGCTTTAT+GGG | - | chr3_2:20615636-20615655 | None:intergenic | 40.0% |
!! | TAATGGTTTGGTCTACCAGT+GGG | + | chr3_2:20615789-20615808 | Msa0398670:intron | 40.0% |
AAAGCAATGCTCGCTTTGTA+AGG | + | chr3_2:20616223-20616242 | Msa0398670:CDS | 40.0% | |
AAGATGTGCTTGATCATGCT+GGG | - | chr3_2:20616313-20616332 | None:intergenic | 40.0% | |
AAAGATGTGCTTGATCATGC+TGG | - | chr3_2:20616314-20616333 | None:intergenic | 40.0% | |
! | GCACATCTTTTCCTTAGACA+TGG | + | chr3_2:20616324-20616343 | Msa0398670:CDS | 40.0% |
GACTATGTGCACTTGTTTAC+AGG | + | chr3_2:20616405-20616424 | Msa0398670:intron | 40.0% | |
!! | CAATTGTTGACTCAAGGCAA+AGG | + | chr3_2:20616515-20616534 | Msa0398670:CDS | 40.0% |
TTACAGACATTGATCCTGAG+AGG | + | chr3_2:20616563-20616582 | Msa0398670:CDS | 40.0% | |
TACAGACATTGATCCTGAGA+GGG | + | chr3_2:20616564-20616583 | Msa0398670:CDS | 40.0% | |
! | CTTACGAGTAAGAAGTACGT+TGG | - | chr3_2:20616712-20616731 | None:intergenic | 40.0% |
!! | ACTTTCTCCTGGGTTTTTAG+AGG | + | chr3_2:20616779-20616798 | Msa0398670:CDS | 40.0% |
! | AAAGCATCCTCTAAAAACCC+AGG | - | chr3_2:20616789-20616808 | None:intergenic | 40.0% |
!! | TGGGTTTTTAGAGGATGCTT+TGG | + | chr3_2:20616788-20616807 | Msa0398670:CDS | 40.0% |
! | TTTAGAGGATGCTTTGGATG+AGG | + | chr3_2:20616794-20616813 | Msa0398670:CDS | 40.0% |
GGAACTGACACAGTTTAAGT+AGG | - | chr3_2:20616903-20616922 | None:intergenic | 40.0% | |
ACTCTTCTCTCTCATCATCT+GGG | - | chr3_2:20617218-20617237 | None:intergenic | 40.0% | |
AAGACGATGAGGAAGAAGAA+AGG | + | chr3_2:20617253-20617272 | Msa0398670:CDS | 40.0% | |
TATGAGGGATGATGATTCTG+AGG | + | chr3_2:20617287-20617306 | Msa0398670:CDS | 40.0% | |
!! | TGATTCTGAGGCAGAATATG+AGG | + | chr3_2:20617299-20617318 | Msa0398670:CDS | 40.0% |
AGAAAATGATGCTTCGGATG+AGG | + | chr3_2:20617350-20617369 | Msa0398670:CDS | 40.0% | |
CTACTTGTCAGTTGTTAAGG+TGG | + | chr3_2:20617616-20617635 | Msa0398670:intron | 40.0% | |
GACATGAATCAAGGCACATA+AGG | - | chr3_2:20617672-20617691 | None:intergenic | 40.0% | |
TATGTGCCTTGATTCATGTC+GGG | + | chr3_2:20617672-20617691 | Msa0398670:intron | 40.0% | |
!! | GGTTGCATTGGTTTCAGTTA+GGG | + | chr3_2:20617719-20617738 | Msa0398670:intron | 40.0% |
TATATCTCGTAGGATAGGAC+CGG | - | chr3_2:20617890-20617909 | None:intergenic | 40.0% | |
CTAGCTATATCTCGTAGGAT+AGG | - | chr3_2:20617895-20617914 | None:intergenic | 40.0% | |
CATCACTAGCTATATCTCGT+AGG | - | chr3_2:20617900-20617919 | None:intergenic | 40.0% | |
CTACGAGATATAGCTAGTGA+TGG | + | chr3_2:20617898-20617917 | Msa0398670:intron | 40.0% | |
! | TCCGTGGTACTTTTGTCTAT+TGG | + | chr3_2:20618245-20618264 | Msa0398670:intron | 40.0% |
ACAAGGATAGTGTTAGGAGT+AGG | - | chr3_2:20618274-20618293 | None:intergenic | 40.0% | |
!!! | ATCTTTTAGGTTGCCACCTA+CGG | + | chr3_2:20618332-20618351 | Msa0398670:intron | 40.0% |
CATACATTAGTGCATTCCGT+AGG | - | chr3_2:20618351-20618370 | None:intergenic | 40.0% | |
AAAAGGTAAGGCCAAAAGGA+AGG | + | chr3_2:20618454-20618473 | Msa0398670:CDS | 40.0% | |
AAAGGTAAGGCCAAAAGGAA+GGG | + | chr3_2:20618455-20618474 | Msa0398670:CDS | 40.0% | |
! | AGAATCAAACCCCTTCCTTT+TGG | - | chr3_2:20618468-20618487 | None:intergenic | 40.0% |
AAGGGGTTTGATTCTGATGA+AGG | + | chr3_2:20618473-20618492 | Msa0398670:CDS | 40.0% | |
CATAATTGTCATTCGGCGAT+GGG | - | chr3_2:20618525-20618544 | None:intergenic | 40.0% | |
ACATAATTGTCATTCGGCGA+TGG | - | chr3_2:20618526-20618545 | None:intergenic | 40.0% | |
AAGGAAGGGGAAATAGCAAA+AGG | - | chr3_2:20618700-20618719 | None:intergenic | 40.0% | |
AACAGACACATATGATGGCA+AGG | - | chr3_2:20618801-20618820 | None:intergenic | 40.0% | |
TATTTGACCTCTTGAACCGT+AGG | + | chr3_2:20618829-20618848 | Msa0398670:intron | 40.0% | |
TGAAAATCCTACGGTTCAAG+AGG | - | chr3_2:20618839-20618858 | None:intergenic | 40.0% | |
GAGACAAAATACCAACAAGC+AGG | - | chr3_2:20619023-20619042 | None:intergenic | 40.0% | |
!! | GCTTGTTGGTATTTTGTCTC+AGG | + | chr3_2:20619023-20619042 | Msa0398670:three_prime_UTR | 40.0% |
GGTGGGAAAAGTGAAGAGAA+GGG | - | chr3_2:20611213-20611232 | None:intergenic | 45.0% | |
! | GAGAGAGCGTAGAAAAATGG+GGG | + | chr3_2:20611239-20611258 | Msa0398670:exon | 45.0% |
! | AGAGAGCGTAGAAAAATGGG+GGG | + | chr3_2:20611240-20611259 | Msa0398670:exon | 45.0% |
AAATGGGGGGTGAAGAGAAA+CGG | + | chr3_2:20611253-20611272 | Msa0398670:exon | 45.0% | |
TTTCACGCAGAAGCTAGCTA+GGG | - | chr3_2:20611430-20611449 | None:intergenic | 45.0% | |
ATTTCACGCAGAAGCTAGCT+AGG | - | chr3_2:20611431-20611450 | None:intergenic | 45.0% | |
GTATTGCAGGATGAAGGAGA+GGG | + | chr3_2:20611534-20611553 | Msa0398670:intron | 45.0% | |
GTAGGGCAAGAAGTTGAAGA+GGG | + | chr3_2:20611561-20611580 | Msa0398670:CDS | 45.0% | |
CAAGAAGTTGAAGAGGGTGA+AGG | + | chr3_2:20611567-20611586 | Msa0398670:CDS | 45.0% | |
GAAGAAGAAGCAGAGAGTGA+AGG | + | chr3_2:20611615-20611634 | Msa0398670:CDS | 45.0% | |
AGAGTGGAAGAAGAGAGTGA+AGG | + | chr3_2:20611660-20611679 | Msa0398670:CDS | 45.0% | |
TGGAAGAAGAGAGTGAAGGT+AGG | + | chr3_2:20611664-20611683 | Msa0398670:CDS | 45.0% | |
GGAAGAAGAGAGTGAAGGTA+GGG | + | chr3_2:20611665-20611684 | Msa0398670:CDS | 45.0% | |
GAAGAAGAGAGTGAAGGTAG+GGG | + | chr3_2:20611666-20611685 | Msa0398670:CDS | 45.0% | |
AAGAAGAGAGTGAAGGTAGG+GGG | + | chr3_2:20611667-20611686 | Msa0398670:CDS | 45.0% | |
! | GTGTTGTTACCAGTAAGCGT+AGG | + | chr3_2:20611727-20611746 | Msa0398670:CDS | 45.0% |
ATCGAGAAGGACTATACCAG+AGG | - | chr3_2:20612232-20612251 | None:intergenic | 45.0% | |
CATAAAGCCAGTCCTTGTTG+TGG | + | chr3_2:20612333-20612352 | Msa0398670:intron | 45.0% | |
! | TAAAGCCAGTCCTTGTTGTG+GGG | + | chr3_2:20612335-20612354 | Msa0398670:intron | 45.0% |
ACGGCCAATCAACAGAATTG+TGG | + | chr3_2:20612392-20612411 | Msa0398670:intron | 45.0% | |
CGGCCAATCAACAGAATTGT+GGG | + | chr3_2:20612393-20612412 | Msa0398670:intron | 45.0% | |
GTGCCCACAATTCTGTTGAT+TGG | - | chr3_2:20612399-20612418 | None:intergenic | 45.0% | |
! | TTTTGGTGAAGTTGAGCTGC+TGG | + | chr3_2:20612467-20612486 | Msa0398670:intron | 45.0% |
TTTGGTGAAGTTGAGCTGCT+GGG | + | chr3_2:20612468-20612487 | Msa0398670:intron | 45.0% | |
GGAAGCAGATAGGAGATTCT+AGG | - | chr3_2:20612540-20612559 | None:intergenic | 45.0% | |
!! | TTTTCCTGATGGCGAGAAGA+TGG | + | chr3_2:20612643-20612662 | Msa0398670:intron | 45.0% |
GGAATTGAAAACGGCGACTA+GGG | + | chr3_2:20612673-20612692 | Msa0398670:intron | 45.0% | |
GGTTAGAGAGTTCACTGAAG+AGG | + | chr3_2:20612694-20612713 | Msa0398670:intron | 45.0% | |
TGCCAATAATCTAGCCCAGA+CGG | - | chr3_2:20612783-20612802 | None:intergenic | 45.0% | |
ATTTCTTGACCTGAACACGC+TGG | + | chr3_2:20612821-20612840 | Msa0398670:intron | 45.0% | |
GGTGTGGTTGGAAATGAAAC+TGG | - | chr3_2:20613461-20613480 | None:intergenic | 45.0% | |
TTGTCGTCAATCTCGTGCAT+CGG | - | chr3_2:20612869-20612888 | None:intergenic | 45.0% | |
ATGCACGAGATTGACGACAA+AGG | + | chr3_2:20612869-20612888 | Msa0398670:intron | 45.0% | |
AGATTGACGACAAAGGACAG+AGG | + | chr3_2:20612876-20612895 | Msa0398670:intron | 45.0% | |
TCTCTTAACCTGAAGCTCGT+CGG | + | chr3_2:20612944-20612963 | Msa0398670:intron | 45.0% | |
TTTCAAATCCGACGAGCTTC+AGG | - | chr3_2:20612955-20612974 | None:intergenic | 45.0% | |
ACGAGTTGCAACTCGCAAAA+TGG | - | chr3_2:20613076-20613095 | None:intergenic | 45.0% | |
ATCAAGAAGGACTACACCAG+AGG | - | chr3_2:20613200-20613219 | None:intergenic | 45.0% | |
CTACACAAGGCACATTTGCA+TGG | - | chr3_2:20613286-20613305 | None:intergenic | 45.0% | |
GGTGTGGTTGGAAATGAAAC+TGG | + | chr3_2:20613461-20613480 | Msa0398670:intron | 45.0% | |
GAAGAGGAATATTGGGCACT+TGG | - | chr3_2:20613636-20613655 | None:intergenic | 45.0% | |
GCTCGCTGAAGAGGAATATT+GGG | - | chr3_2:20613643-20613662 | None:intergenic | 45.0% | |
AGCTCGCTGAAGAGGAATAT+TGG | - | chr3_2:20613644-20613663 | None:intergenic | 45.0% | |
TGCTGCATCTTCTAACCATC+AGG | + | chr3_2:20613696-20613715 | Msa0398670:intron | 45.0% | |
! | ACACAGACACGAAAGCATAG+AGG | + | chr3_2:20613796-20613815 | Msa0398670:intron | 45.0% |
! | GAAAGCATAGAGGAGCTTCA+AGG | + | chr3_2:20613806-20613825 | Msa0398670:intron | 45.0% |
!! | TTTGGTGATGTTGAGCTGCT+GGG | - | chr3_2:20613872-20613891 | None:intergenic | 45.0% |
!!! | TTTTGGTGATGTTGAGCTGC+TGG | - | chr3_2:20613873-20613892 | None:intergenic | 45.0% |
AAAGCGAGTTCTTGATGTGG+GGG | - | chr3_2:20614004-20614023 | None:intergenic | 45.0% | |
TTAATACTTGCGCCGTTGCT+GGG | - | chr3_2:20614046-20614065 | None:intergenic | 45.0% | |
! | TCATGATTTGGATTCTGCCC+CGG | + | chr3_2:20614566-20614585 | Msa0398670:CDS | 45.0% |
CCTGTTGTAGAGATATCCTG+CGG | + | chr3_2:20614760-20614779 | Msa0398670:intron | 45.0% | |
GCATCAGTATGAATCAGAGG+AGG | + | chr3_2:20614841-20614860 | Msa0398670:CDS | 45.0% | |
AGTGGAATCTCCAACTCCAA+TGG | - | chr3_2:20614908-20614927 | None:intergenic | 45.0% | |
GAACATAGGTCTCCAACACA+AGG | - | chr3_2:20614964-20614983 | None:intergenic | 45.0% | |
TCATCTGCCACACAAATGAG+AGG | - | chr3_2:20615311-20615330 | None:intergenic | 45.0% | |
! | AAACAAGAAGCGCATACGCT+TGG | + | chr3_2:20615428-20615447 | Msa0398670:CDS | 45.0% |
CTTACAGATGTTGTGCCATC+AGG | - | chr3_2:20615489-20615508 | None:intergenic | 45.0% | |
CCTAGTGGTCAAAGGCTTTA+TGG | - | chr3_2:20615637-20615656 | None:intergenic | 45.0% | |
CCATAAAGCCTTTGACCACT+AGG | + | chr3_2:20615634-20615653 | Msa0398670:intron | 45.0% | |
TAAAGCCTTTGACCACTAGG+TGG | + | chr3_2:20615637-20615656 | Msa0398670:intron | 45.0% | |
AAAGCCTTTGACCACTAGGT+GGG | + | chr3_2:20615638-20615657 | Msa0398670:intron | 45.0% | |
ATATATCCAACCCCACCTAG+TGG | - | chr3_2:20615652-20615671 | None:intergenic | 45.0% | |
GATGCCACTATGCTTGATCA+TGG | + | chr3_2:20615681-20615700 | Msa0398670:intron | 45.0% | |
TGGTCCATGATCAAGCATAG+TGG | - | chr3_2:20615688-20615707 | None:intergenic | 45.0% | |
!! | CTAATGGTTTGGTCTACCAG+TGG | + | chr3_2:20615788-20615807 | Msa0398670:intron | 45.0% |
! | TACCAGTGGGTCTTTTCTAC+AGG | + | chr3_2:20615802-20615821 | Msa0398670:intron | 45.0% |
! | TGGGTCTTTTCTACAGGTGT+TGG | + | chr3_2:20615808-20615827 | Msa0398670:intron | 45.0% |
AAACCTTTCCCTGTTAGGCT+TGG | + | chr3_2:20615855-20615874 | Msa0398670:intron | 45.0% | |
AGTTCTTGACGTATCTGAGC+AGG | + | chr3_2:20616284-20616303 | Msa0398670:CDS | 45.0% | |
CAAGTGCACATAGTCCATTG+AGG | - | chr3_2:20616400-20616419 | None:intergenic | 45.0% | |
CAGGGAATTCTGCAATCACA+AGG | + | chr3_2:20616424-20616443 | Msa0398670:intron | 45.0% | |
AATCACAAGGACAGCTATCG+AGG | + | chr3_2:20616437-20616456 | Msa0398670:CDS | 45.0% | |
GAATTCGACGACAAGGAAGA+GGG | - | chr3_2:20616478-20616497 | None:intergenic | 45.0% | |
AGAATTCGACGACAAGGAAG+AGG | - | chr3_2:20616479-20616498 | None:intergenic | 45.0% | |
CCTTGTCGTCGAATTCTCAT+CGG | + | chr3_2:20616482-20616501 | Msa0398670:CDS | 45.0% | |
!! | TGTTGACTCAAGGCAAAGGA+AGG | + | chr3_2:20616519-20616538 | Msa0398670:CDS | 45.0% |
AGGCTGAAAGTCAGACTATC+AGG | + | chr3_2:20616685-20616704 | Msa0398670:intron | 45.0% | |
GGCTGAAAGTCAGACTATCA+GGG | + | chr3_2:20616686-20616705 | Msa0398670:intron | 45.0% | |
TCTTACTCGTAAGCGCGAAA+AGG | + | chr3_2:20616719-20616738 | Msa0398670:CDS | 45.0% | |
GTAAGCGCGAAAAGGTGAAT+CGG | + | chr3_2:20616727-20616746 | Msa0398670:CDS | 45.0% | |
GGAAATATGCTCCAACTGAG+AGG | + | chr3_2:20616748-20616767 | Msa0398670:CDS | 45.0% | |
AATATGCTCCAACTGAGAGG+AGG | + | chr3_2:20616751-20616770 | Msa0398670:CDS | 45.0% | |
TAGAACACAGCGTCACTATG+AGG | + | chr3_2:20616980-20616999 | Msa0398670:CDS | 45.0% | |
GACTCTTCTCTCTCATCATC+TGG | - | chr3_2:20617219-20617238 | None:intergenic | 45.0% | |
TGAGGCAGAATATGAGGATG+AGG | + | chr3_2:20617305-20617324 | Msa0398670:CDS | 45.0% | |
AATCACTAGTGTTTCACCGC+CGG | - | chr3_2:20617549-20617568 | None:intergenic | 45.0% | |
ATGTGCCTTGATTCATGTCG+GGG | + | chr3_2:20617673-20617692 | Msa0398670:intron | 45.0% | |
ACTGAAACCAATGCAACCCA+TGG | - | chr3_2:20617717-20617736 | None:intergenic | 45.0% | |
!! | GGGTTGCATTGGTTTCAGTT+AGG | + | chr3_2:20617718-20617737 | Msa0398670:intron | 45.0% |
TAGAGACCATGGCTGAAAGA+TGG | - | chr3_2:20618128-20618147 | None:intergenic | 45.0% | |
ATCTTTCAGCCATGGTCTCT+AGG | + | chr3_2:20618127-20618146 | Msa0398670:intron | 45.0% | |
ACATTAGTGCATTCCGTAGG+TGG | - | chr3_2:20618348-20618367 | None:intergenic | 45.0% | |
AAGGTAAGGCCAAAAGGAAG+GGG | + | chr3_2:20618456-20618475 | Msa0398670:CDS | 45.0% | |
!! | GTTGTTGGTTTCTTAGGAGG+AGG | - | chr3_2:20618503-20618522 | None:intergenic | 45.0% |
!! | TGGGTTGTTGGTTTCTTAGG+AGG | - | chr3_2:20618506-20618525 | None:intergenic | 45.0% |
!! | CGATGGGTTGTTGGTTTCTT+AGG | - | chr3_2:20618509-20618528 | None:intergenic | 45.0% |
TGATGGCAAGGACCATTTGA+TGG | - | chr3_2:20618789-20618808 | None:intergenic | 45.0% | |
AGAGTGAATGACTACTACCC+TGG | - | chr3_2:20618885-20618904 | None:intergenic | 45.0% | |
!!! | CAATTATAAATATATTTTTT+TGG | - | chr3_2:20611084-20611103 | None:intergenic | 5.0% |
!! | CAATAATAATAATAATTAAA+AGG | - | chr3_2:20613552-20613571 | None:intergenic | 5.0% |
GGGTGGGAAAAGTGAAGAGA+AGG | - | chr3_2:20611214-20611233 | None:intergenic | 50.0% | |
TACGCTCTCTCTGTTTGGGT+GGG | - | chr3_2:20611230-20611249 | None:intergenic | 50.0% | |
TCTCTTCGGAGATCAATCCG+AGG | + | chr3_2:20611293-20611312 | Msa0398670:CDS | 50.0% | |
GGTATTGCAGGATGAAGGAG+AGG | + | chr3_2:20611533-20611552 | Msa0398670:intron | 50.0% | |
GGTAGGGCAAGAAGTTGAAG+AGG | + | chr3_2:20611560-20611579 | Msa0398670:CDS | 50.0% | |
AGAGGGTGAAGGAGAAGTTG+AGG | + | chr3_2:20611578-20611597 | Msa0398670:CDS | 50.0% | |
GAGGGTGAAGGAGAAGTTGA+GGG | + | chr3_2:20611579-20611598 | Msa0398670:CDS | 50.0% | |
AGGGTGAAGGAGAAGTTGAG+GGG | + | chr3_2:20611580-20611599 | Msa0398670:CDS | 50.0% | |
AGAGAGTGAAGGTGAGAGAG+AGG | + | chr3_2:20611626-20611645 | Msa0398670:CDS | 50.0% | |
AGTGAAGGTGAGAGAGAGGT+TGG | + | chr3_2:20611630-20611649 | Msa0398670:CDS | 50.0% | |
!! | AGAGGTTGGTGATCAGAGAG+TGG | + | chr3_2:20611644-20611663 | Msa0398670:CDS | 50.0% |
AGAAGAGAGTGAAGGTAGGG+GGG | + | chr3_2:20611668-20611687 | Msa0398670:CDS | 50.0% | |
AACGACATCCCTACGCTTAC+TGG | - | chr3_2:20611739-20611758 | None:intergenic | 50.0% | |
CGTAGGGATGTCGTTGAAAG+TGG | + | chr3_2:20611744-20611763 | Msa0398670:CDS | 50.0% | |
ACAGCACCAACCCAACAATG+TGG | - | chr3_2:20611868-20611887 | None:intergenic | 50.0% | |
GATGTGTGAGTCTAGCCACT+AGG | + | chr3_2:20612187-20612206 | Msa0398670:intron | 50.0% | |
! | AAAGCCAGTCCTTGTTGTGG+GGG | + | chr3_2:20612336-20612355 | Msa0398670:intron | 50.0% |
CTCATAAACCCCCCACAACA+AGG | - | chr3_2:20612348-20612367 | None:intergenic | 50.0% | |
! | TGTTGATTGGCCGTGATCCT+CGG | - | chr3_2:20612386-20612405 | None:intergenic | 50.0% |
TCAACAGAATTGTGGGCACC+AGG | + | chr3_2:20612400-20612419 | Msa0398670:intron | 50.0% | |
CAACAGAATTGTGGGCACCA+GGG | + | chr3_2:20612401-20612420 | Msa0398670:intron | 50.0% | |
ACACAGAGACGGAAGCAGAT+AGG | - | chr3_2:20612550-20612569 | None:intergenic | 50.0% | |
ACTCGCACACAACACAGAGA+CGG | - | chr3_2:20612561-20612580 | None:intergenic | 50.0% | |
ATGGCGAGAAGATGGAGCAT+AGG | + | chr3_2:20612651-20612670 | Msa0398670:intron | 50.0% | |
TGGCGAGAAGATGGAGCATA+GGG | + | chr3_2:20612652-20612671 | Msa0398670:intron | 50.0% | |
GGGAATTGAAAACGGCGACT+AGG | + | chr3_2:20612672-20612691 | Msa0398670:intron | 50.0% | |
GAGAGTTCACTGAAGAGGAC+AGG | + | chr3_2:20612699-20612718 | Msa0398670:intron | 50.0% | |
TCACTGAAGAGGACAGGAAG+AGG | + | chr3_2:20612705-20612724 | Msa0398670:intron | 50.0% | |
AAGAAAGGAATTGGGCCGTC+TGG | + | chr3_2:20612765-20612784 | Msa0398670:intron | 50.0% | |
AGAAAGGAATTGGGCCGTCT+GGG | + | chr3_2:20612766-20612785 | Msa0398670:intron | 50.0% | |
!! | TGGTTCAACGGGCATTGAAG+TGG | - | chr3_2:20613056-20613075 | None:intergenic | 50.0% |
GTCAGACTCAGACTCACACT+AGG | + | chr3_2:20613097-20613116 | Msa0398670:intron | 50.0% | |
TGACTGACGACAAAGGACAG+AGG | - | chr3_2:20613433-20613452 | None:intergenic | 50.0% | |
! | GTCAGTCATGTGTATCGGTG+TGG | + | chr3_2:20613445-20613464 | Msa0398670:intron | 50.0% |
! | GTCATGTGTATCGGTGTGGT+TGG | + | chr3_2:20613449-20613468 | Msa0398670:intron | 50.0% |
AGAAAGGAATTGGGCCGTCT+GGG | - | chr3_2:20612766-20612785 | None:intergenic | 50.0% | |
AAGAAAGGAATTGGGCCGTC+TGG | - | chr3_2:20612765-20612784 | None:intergenic | 50.0% | |
CGGCCAATCAGCAGAATTGT+GGG | - | chr3_2:20613947-20613966 | None:intergenic | 50.0% | |
AAGCGAGTTCTTGATGTGGG+GGG | - | chr3_2:20614003-20614022 | None:intergenic | 50.0% | |
GTTAATACTTGCGCCGTTGC+TGG | - | chr3_2:20614047-20614066 | None:intergenic | 50.0% | |
TATGGGGTATGCAGTTCAGC+AGG | + | chr3_2:20614632-20614651 | Msa0398670:CDS | 50.0% | |
CCGCAGGATATCTCTACAAC+AGG | - | chr3_2:20614763-20614782 | None:intergenic | 50.0% | |
GTTGTAGAGATATCCTGCGG+AGG | + | chr3_2:20614763-20614782 | Msa0398670:intron | 50.0% | |
TGAAAAGAGCTTGAGACCGG+AGG | + | chr3_2:20614799-20614818 | Msa0398670:CDS | 50.0% | |
GGAATCTCCAACTCCAATGG+TGG | - | chr3_2:20614905-20614924 | None:intergenic | 50.0% | |
AACACAAGGCAGACCTTTCC+TGG | - | chr3_2:20614950-20614969 | None:intergenic | 50.0% | |
AGGAAAGGTCTGCCTTGTGT+TGG | + | chr3_2:20614949-20614968 | Msa0398670:intron | 50.0% | |
! | GTAAAGGTTGCCACTTCCCA+TGG | - | chr3_2:20615583-20615602 | None:intergenic | 50.0% |
AAGCCTTTGACCACTAGGTG+GGG | + | chr3_2:20615639-20615658 | Msa0398670:intron | 50.0% | |
CACCTGTAGAAAAGACCCAC+TGG | - | chr3_2:20615807-20615826 | None:intergenic | 50.0% | |
TGACCAAGCCTAACAGGGAA+AGG | - | chr3_2:20615861-20615880 | None:intergenic | 50.0% | |
GCAATGCTCGCTTTGTAAGG+TGG | + | chr3_2:20616226-20616245 | Msa0398670:CDS | 50.0% | |
CGCTTTGTAAGGTGGTCTGA+TGG | + | chr3_2:20616234-20616253 | Msa0398670:CDS | 50.0% | |
CCGATGAGAATTCGACGACA+AGG | - | chr3_2:20616485-20616504 | None:intergenic | 50.0% | |
! | TGCTCCTTTTCTTCAGGACG+AGG | + | chr3_2:20616935-20616954 | Msa0398670:intron | 50.0% |
GCTTCCTCGTCCTGAAGAAA+AGG | - | chr3_2:20616942-20616961 | None:intergenic | 50.0% | |
AACACAGCGTCACTATGAGG+AGG | + | chr3_2:20616983-20617002 | Msa0398670:CDS | 50.0% | |
CATCATCTGGGTAACCCACT+TGG | - | chr3_2:20617206-20617225 | None:intergenic | 50.0% | |
TTCGGATGAGGACGAAGATG+AGG | + | chr3_2:20617362-20617381 | Msa0398670:CDS | 50.0% | |
GAAGTCCCCGACATGAATCA+AGG | - | chr3_2:20617681-20617700 | None:intergenic | 50.0% | |
ATGTCGGGGACTTCAGAAGT+AGG | + | chr3_2:20617687-20617706 | Msa0398670:intron | 50.0% | |
TGTCGGGGACTTCAGAAGTA+GGG | + | chr3_2:20617688-20617707 | Msa0398670:intron | 50.0% | |
TTCAGAAGTAGGGGGACCAT+GGG | + | chr3_2:20617698-20617717 | Msa0398670:intron | 50.0% | |
GAGTGACCATCTTTCAGCCA+TGG | + | chr3_2:20618119-20618138 | Msa0398670:intron | 50.0% | |
AAGCAGGGAATACAGAGGAG+GGG | - | chr3_2:20619007-20619026 | None:intergenic | 50.0% | |
CAAGCAGGGAATACAGAGGA+GGG | - | chr3_2:20619008-20619027 | None:intergenic | 50.0% | |
ACAAGCAGGGAATACAGAGG+AGG | - | chr3_2:20619009-20619028 | None:intergenic | 50.0% | |
CCAACAAGCAGGGAATACAG+AGG | - | chr3_2:20619012-20619031 | None:intergenic | 50.0% | |
CCTCTGTATTCCCTGCTTGT+TGG | + | chr3_2:20619009-20619028 | Msa0398670:three_prime_UTR | 50.0% | |
CTACGCTCTCTCTGTTTGGG+TGG | - | chr3_2:20611231-20611250 | None:intergenic | 55.0% | |
CTTCGGAGATCAATCCGAGG+AGG | + | chr3_2:20611296-20611315 | Msa0398670:CDS | 55.0% | |
TTGCAGGATGAAGGAGAGGG+AGG | + | chr3_2:20611537-20611556 | Msa0398670:intron | 55.0% | |
TGCAGGATGAAGGAGAGGGA+GGG | + | chr3_2:20611538-20611557 | Msa0398670:intron | 55.0% | |
ATGAAGGAGAGGGAGGGGTA+GGG | + | chr3_2:20611544-20611563 | Msa0398670:CDS | 55.0% | |
GAAGGAGAAGTTGAGGGGCA+AGG | + | chr3_2:20611585-20611604 | Msa0398670:CDS | 55.0% | |
AGAAGTTGAGGGGCAAGGAG+AGG | + | chr3_2:20611590-20611609 | Msa0398670:CDS | 55.0% | |
CAGCAGCTAGAAGAAGCCTG+AGG | + | chr3_2:20611796-20611815 | Msa0398670:CDS | 55.0% | |
TGGAGAAGCGGCACACTATG+TGG | + | chr3_2:20611932-20611951 | Msa0398670:intron | 55.0% | |
GGAATCCTGGGTTCGAACTC+AGG | - | chr3_2:20612149-20612168 | None:intergenic | 55.0% | |
! | AAGCCAGTCCTTGTTGTGGG+GGG | + | chr3_2:20612337-20612356 | Msa0398670:intron | 55.0% |
AAACCCCCCACAACAAGGAC+TGG | - | chr3_2:20612343-20612362 | None:intergenic | 55.0% | |
TGATCCTCGGCTGTCAGAGT+CGG | - | chr3_2:20612373-20612392 | None:intergenic | 55.0% | |
ACTCTGACAGCCGAGGATCA+CGG | + | chr3_2:20612373-20612392 | Msa0398670:intron | 55.0% | |
CGCAAAGAGTAGCAGTGTCC+AGG | - | chr3_2:20612494-20612513 | None:intergenic | 55.0% | |
TGCTCCATCTTCTCGCCATC+AGG | - | chr3_2:20612650-20612669 | None:intergenic | 55.0% | |
! | GGCCGTCTGGGCTAGATTAT+TGG | + | chr3_2:20612778-20612797 | Msa0398670:intron | 55.0% |
! | ATCTCGTGCATCGGTGTGGT+TGG | - | chr3_2:20612860-20612879 | None:intergenic | 55.0% |
! | GTCAATCTCGTGCATCGGTG+TGG | - | chr3_2:20612864-20612883 | None:intergenic | 55.0% |
GAAACTGGGCCAGCATGTTC+AGG | + | chr3_2:20613476-20613495 | Msa0398670:intron | 55.0% | |
GGTTAGAGAGCTCGCTGAAG+AGG | - | chr3_2:20613652-20613671 | None:intergenic | 55.0% | |
TGCAGAGAGTAGCAGTGTCC+AGG | + | chr3_2:20613846-20613865 | Msa0398670:intron | 55.0% | |
GCGCCCACAATTCTGCTGAT+TGG | + | chr3_2:20613941-20613960 | Msa0398670:intron | 55.0% | |
GCGGCCAATCAGCAGAATTG+TGG | - | chr3_2:20613948-20613967 | None:intergenic | 55.0% | |
! | TGCTGATTGGCCGCGATTCT+CGG | + | chr3_2:20613954-20613973 | Msa0398670:intron | 55.0% |
AGTGCCAATCCACCCAGCAA+CGG | + | chr3_2:20614031-20614050 | Msa0398670:intron | 55.0% | |
GTAGAGATATCCTGCGGAGG+AGG | + | chr3_2:20614766-20614785 | Msa0398670:intron | 55.0% | |
AGATATCCTGCGGAGGAGGA+AGG | + | chr3_2:20614770-20614789 | Msa0398670:CDS | 55.0% | |
GATATCCTGCGGAGGAGGAA+GGG | + | chr3_2:20614771-20614790 | Msa0398670:CDS | 55.0% | |
TAAGCCACTTGGGCCACCAT+TGG | + | chr3_2:20614889-20614908 | Msa0398670:CDS | 55.0% | |
AACTCCAATGGTGGCCCAAG+TGG | - | chr3_2:20614896-20614915 | None:intergenic | 55.0% | |
ACTTGGGCCACCATTGGAGT+TGG | + | chr3_2:20614895-20614914 | Msa0398670:CDS | 55.0% | |
TTTCCTGGAAGAGCTGGTGG+TGG | - | chr3_2:20614935-20614954 | None:intergenic | 55.0% | |
ACCACCAGCTCTTCCAGGAA+AGG | + | chr3_2:20614934-20614953 | Msa0398670:CDS | 55.0% | |
ACCTTTCCTGGAAGAGCTGG+TGG | - | chr3_2:20614938-20614957 | None:intergenic | 55.0% | |
CAGACCTTTCCTGGAAGAGC+TGG | - | chr3_2:20614941-20614960 | None:intergenic | 55.0% | |
CAACCCCACCTAGTGGTCAA+AGG | - | chr3_2:20615645-20615664 | None:intergenic | 55.0% | |
CTTTGACCACTAGGTGGGGT+TGG | + | chr3_2:20615643-20615662 | Msa0398670:intron | 55.0% | |
AGTTGACGCCTCCTCTCAGT+TGG | - | chr3_2:20616762-20616781 | None:intergenic | 55.0% | |
!! | AGGAGGCGTCAACTTTCTCC+TGG | + | chr3_2:20616768-20616787 | Msa0398670:CDS | 55.0% |
!! | GGAGGCGTCAACTTTCTCCT+GGG | + | chr3_2:20616769-20616788 | Msa0398670:CDS | 55.0% |
!! | GACCAAAGAGCATCCCTCGT+AGG | + | chr3_2:20617145-20617164 | Msa0398670:CDS | 55.0% |
GACCTACGAGGGATGCTCTT+TGG | - | chr3_2:20617150-20617169 | None:intergenic | 55.0% | |
GGAGGAACGATGACCTACGA+GGG | - | chr3_2:20617161-20617180 | None:intergenic | 55.0% | |
TCCCACCAGCAAAATCCTCC+CGG | + | chr3_2:20617178-20617197 | Msa0398670:CDS | 55.0% | |
AAAATCCTCCCGGCACCAAG+TGG | + | chr3_2:20617188-20617207 | Msa0398670:CDS | 55.0% | |
AAATCCTCCCGGCACCAAGT+GGG | + | chr3_2:20617189-20617208 | Msa0398670:CDS | 55.0% | |
AAAGGCCTCGCTCTCGTATG+AGG | + | chr3_2:20617271-20617290 | Msa0398670:CDS | 55.0% | |
AAGGCCTCGCTCTCGTATGA+GGG | + | chr3_2:20617272-20617291 | Msa0398670:CDS | 55.0% | |
TCATCCCTCATACGAGAGCG+AGG | - | chr3_2:20617279-20617298 | None:intergenic | 55.0% | |
GTCGGGGACTTCAGAAGTAG+GGG | + | chr3_2:20617689-20617708 | Msa0398670:intron | 55.0% | |
TCGGGGACTTCAGAAGTAGG+GGG | + | chr3_2:20617690-20617709 | Msa0398670:intron | 55.0% | |
CTTCAGAAGTAGGGGGACCA+TGG | + | chr3_2:20617697-20617716 | Msa0398670:intron | 55.0% | |
CGAACTCTGCCTAGAGACCA+TGG | - | chr3_2:20618139-20618158 | None:intergenic | 55.0% | |
!! | GTCATTCGGCGATGGGTTGT+TGG | - | chr3_2:20618518-20618537 | None:intergenic | 55.0% |
AGCAGGGAATACAGAGGAGG+GGG | - | chr3_2:20619006-20619025 | None:intergenic | 55.0% | |
GCAGGATGAAGGAGAGGGAG+GGG | + | chr3_2:20611539-20611558 | Msa0398670:intron | 60.0% | |
GATGAAGGAGAGGGAGGGGT+AGG | + | chr3_2:20611543-20611562 | Msa0398670:CDS | 60.0% | |
ATGGGCCTGAGTTCGAACCC+AGG | + | chr3_2:20612141-20612160 | Msa0398670:intron | 60.0% | |
! | AGAACCGACTCTGACAGCCG+AGG | + | chr3_2:20612366-20612385 | Msa0398670:intron | 60.0% |
TGAAGTTGAGCTGCTGGGCC+TGG | + | chr3_2:20612473-20612492 | Msa0398670:intron | 60.0% | |
GAAACTGGGCCAGCGTGTTC+AGG | - | chr3_2:20612833-20612852 | None:intergenic | 60.0% | |
TGATGTTGAGCTGCTGGGCC+TGG | - | chr3_2:20613867-20613886 | None:intergenic | 60.0% | |
CAGCAGAATTGTGGGCGCCA+GGG | - | chr3_2:20613939-20613958 | None:intergenic | 60.0% | |
TCAGCAGAATTGTGGGCGCC+AGG | - | chr3_2:20613940-20613959 | None:intergenic | 60.0% | |
! | TGATTGGCCGCGATTCTCGG+CGG | + | chr3_2:20613957-20613976 | Msa0398670:intron | 60.0% |
ACTCTGACCGCCGAGAATCG+CGG | - | chr3_2:20613967-20613986 | None:intergenic | 60.0% | |
CGATTCTCGGCGGTCAGAGT+CGG | + | chr3_2:20613967-20613986 | Msa0398670:intron | 60.0% | |
ATACTTGCGCCGTTGCTGGG+TGG | - | chr3_2:20614043-20614062 | None:intergenic | 60.0% | |
!! | AGAGCTGGTGGTGGACGTAG+TGG | - | chr3_2:20614926-20614945 | None:intergenic | 60.0% |
GGGAGGAACGATGACCTACG+AGG | - | chr3_2:20617162-20617181 | None:intergenic | 60.0% | |
! | GGGAGGATTTTGCTGGTGGG+AGG | - | chr3_2:20617179-20617198 | None:intergenic | 60.0% |
! | GCCGGGAGGATTTTGCTGGT+GGG | - | chr3_2:20617182-20617201 | None:intergenic | 60.0% |
! | TGCCGGGAGGATTTTGCTGG+TGG | - | chr3_2:20617183-20617202 | None:intergenic | 60.0% |
!! | TGGTGCCGGGAGGATTTTGC+TGG | - | chr3_2:20617186-20617205 | None:intergenic | 60.0% |
!! | TGGGTAACCCACTTGGTGCC+GGG | - | chr3_2:20617199-20617218 | None:intergenic | 60.0% |
!! | CTGGGTAACCCACTTGGTGC+CGG | - | chr3_2:20617200-20617219 | None:intergenic | 60.0% |
! | AGGGGGACCATGGGTTGCAT+TGG | + | chr3_2:20617707-20617726 | Msa0398670:intron | 60.0% |
TGCGCCGTTGCTGGGTGGAT+TGG | - | chr3_2:20614038-20614057 | None:intergenic | 65.0% | |
TAGCTCCCTTCCTCCTCCGC+AGG | - | chr3_2:20614779-20614798 | None:intergenic | 65.0% | |
CGTCCACCACCAGCTCTTCC+AGG | + | chr3_2:20614929-20614948 | Msa0398670:CDS | 65.0% | |
!! | GTAACCCACTTGGTGCCGGG+AGG | - | chr3_2:20617196-20617215 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_2 | gene | 20611067 | 20619265 | 20611067 | ID=Msa0398670;Name=Msa0398670 |
chr3_2 | mRNA | 20611067 | 20619265 | 20611067 | ID=Msa0398670-mRNA-1;Parent=Msa0398670;Name=Msa0398670-mRNA-1;_AED=0.07;_eAED=0.07;_QI=188|1|1|1|0.90|0.91|12|337|606 |
chr3_2 | exon | 20611067 | 20611368 | 20611067 | ID=Msa0398670-mRNA-1:exon:4487;Parent=Msa0398670-mRNA-1 |
chr3_2 | exon | 20611543 | 20611817 | 20611543 | ID=Msa0398670-mRNA-1:exon:4488;Parent=Msa0398670-mRNA-1 |
chr3_2 | exon | 20614536 | 20614674 | 20614536 | ID=Msa0398670-mRNA-1:exon:4489;Parent=Msa0398670-mRNA-1 |
chr3_2 | exon | 20614770 | 20614955 | 20614770 | ID=Msa0398670-mRNA-1:exon:4490;Parent=Msa0398670-mRNA-1 |
chr3_2 | exon | 20615327 | 20615503 | 20615327 | ID=Msa0398670-mRNA-1:exon:4491;Parent=Msa0398670-mRNA-1 |
chr3_2 | exon | 20616219 | 20616350 | 20616219 | ID=Msa0398670-mRNA-1:exon:4492;Parent=Msa0398670-mRNA-1 |
chr3_2 | exon | 20616427 | 20616606 | 20616427 | ID=Msa0398670-mRNA-1:exon:4493;Parent=Msa0398670-mRNA-1 |
chr3_2 | exon | 20616687 | 20616815 | 20616687 | ID=Msa0398670-mRNA-1:exon:4494;Parent=Msa0398670-mRNA-1 |
chr3_2 | exon | 20616951 | 20617055 | 20616951 | ID=Msa0398670-mRNA-1:exon:4495;Parent=Msa0398670-mRNA-1 |
chr3_2 | exon | 20617138 | 20617383 | 20617138 | ID=Msa0398670-mRNA-1:exon:4496;Parent=Msa0398670-mRNA-1 |
chr3_2 | exon | 20618428 | 20618571 | 20618428 | ID=Msa0398670-mRNA-1:exon:4497;Parent=Msa0398670-mRNA-1 |
chr3_2 | exon | 20618935 | 20619265 | 20618935 | ID=Msa0398670-mRNA-1:exon:4498;Parent=Msa0398670-mRNA-1 |
chr3_2 | five_prime_UTR | 20611067 | 20611254 | 20611067 | ID=Msa0398670-mRNA-1:five_prime_utr;Parent=Msa0398670-mRNA-1 |
chr3_2 | CDS | 20611255 | 20611368 | 20611255 | ID=Msa0398670-mRNA-1:cds;Parent=Msa0398670-mRNA-1 |
chr3_2 | CDS | 20611543 | 20611817 | 20611543 | ID=Msa0398670-mRNA-1:cds;Parent=Msa0398670-mRNA-1 |
chr3_2 | CDS | 20614536 | 20614674 | 20614536 | ID=Msa0398670-mRNA-1:cds;Parent=Msa0398670-mRNA-1 |
chr3_2 | CDS | 20614770 | 20614955 | 20614770 | ID=Msa0398670-mRNA-1:cds;Parent=Msa0398670-mRNA-1 |
chr3_2 | CDS | 20615327 | 20615503 | 20615327 | ID=Msa0398670-mRNA-1:cds;Parent=Msa0398670-mRNA-1 |
chr3_2 | CDS | 20616219 | 20616350 | 20616219 | ID=Msa0398670-mRNA-1:cds;Parent=Msa0398670-mRNA-1 |
chr3_2 | CDS | 20616427 | 20616606 | 20616427 | ID=Msa0398670-mRNA-1:cds;Parent=Msa0398670-mRNA-1 |
chr3_2 | CDS | 20616687 | 20616815 | 20616687 | ID=Msa0398670-mRNA-1:cds;Parent=Msa0398670-mRNA-1 |
chr3_2 | CDS | 20616951 | 20617055 | 20616951 | ID=Msa0398670-mRNA-1:cds;Parent=Msa0398670-mRNA-1 |
chr3_2 | CDS | 20617138 | 20617383 | 20617138 | ID=Msa0398670-mRNA-1:cds;Parent=Msa0398670-mRNA-1 |
chr3_2 | CDS | 20618428 | 20618565 | 20618428 | ID=Msa0398670-mRNA-1:cds;Parent=Msa0398670-mRNA-1 |
chr3_2 | three_prime_UTR | 20618566 | 20618571 | 20618566 | ID=Msa0398670-mRNA-1:three_prime_utr;Parent=Msa0398670-mRNA-1 |
chr3_2 | three_prime_UTR | 20618935 | 20619265 | 20618935 | ID=Msa0398670-mRNA-1:three_prime_utr;Parent=Msa0398670-mRNA-1 |
Gene Sequence |
Protein sequence |