AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0177110


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0177110 MtrunA17_Chr1g0199821 97.706 436 10 0 1 436 1 436 0.0 883
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0177110 AT1G48850.1 79.439 428 79 3 2 425 3 425 0.0 704
Msa0177110 AT1G48850.3 78.729 362 68 3 2 359 3 359 0.0 590
Msa0177110 AT1G48850.2 78.729 362 68 3 2 359 3 359 0.0 590

Find 169 sgRNAs with CRISPR-Local

Find 666 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACATGTATCAGTCTCCTTTC+TGG 0.119746 1_4:+63948902 None:intergenic
CACTTCTTCTGTTTCTAATT+TGG 0.135458 1_4:+63941899 None:intergenic
TAACTTCCTTGTTCACTTCT+TGG 0.149545 1_4:+63950495 None:intergenic
ATCATCTTCTCTGCATATTC+AGG 0.226636 1_4:+63945277 None:intergenic
GCGAGATGTCATTAGCTTAT+AGG 0.246076 1_4:-63948603 Msa0177110:CDS
TTGGACTGCATGTCGTATTC+TGG 0.254762 1_4:-63941745 Msa0177110:three_prime_UTR
TCCTTAAGAGATCCAGTTCT+TGG 0.259401 1_4:-63941764 Msa0177110:three_prime_UTR
GAGGGATCGGAGATTGGAAT+TGG 0.269061 1_4:+63950077 None:intergenic
AAAGCCACGTGGGCAGTAAC+TGG 0.271931 1_4:-63950381 Msa0177110:five_prime_UTR
TACATATGGGAACCACTTTC+GGG 0.279701 1_4:-63949267 Msa0177110:CDS
CACTTTCGGGTTACAACATA+TGG 0.302913 1_4:-63949254 Msa0177110:CDS
ATGGCTATTGCTATTGCTAT+TGG 0.307089 1_4:+63950171 None:intergenic
CATGTATCAGTCTCCTTTCT+GGG 0.318592 1_4:+63948903 None:intergenic
TTCATTATTTCTCAGGGTCT+TGG 0.321630 1_4:-63943649 Msa0177110:intron
TCGCAAAAGTTGAATTGAAT+TGG 0.335467 1_4:+63950274 None:intergenic
GTACATATGGGAACCACTTT+CGG 0.342196 1_4:-63949268 Msa0177110:CDS
TTTCCTCTTTGATCAGTATT+GGG 0.342486 1_4:+63948735 None:intergenic
CAATTTGGTAGTGGGTTTGC+CGG 0.346511 1_4:-63943553 Msa0177110:intron
GCTTCAAGTTTGTCAAATAC+TGG 0.357310 1_4:+63943622 None:intergenic
ATTTCCTCTTTGATCAGTAT+TGG 0.358775 1_4:+63948734 None:intergenic
CTTGCTGCTGGTGTCTGCTT+TGG 0.363471 1_4:+63950429 None:intergenic
TGGCTATTGCTATTGCTATT+GGG 0.364841 1_4:+63950172 None:intergenic
CTCAGATAAAATCTTCATTC+TGG 0.368408 1_4:-63941835 Msa0177110:three_prime_UTR
CCTTTCTGGGAGTTGTAATT+CGG 0.369236 1_4:+63948916 None:intergenic
CGGGCAGCTGGGAGTACATA+TGG 0.371354 1_4:-63949281 Msa0177110:CDS
GTGTTCACTCCCAGTCAAAA+AGG 0.378540 1_4:+63943402 None:intergenic
TCATTCTGGCTAGTGTTTAG+TGG 0.379236 1_4:-63941821 Msa0177110:three_prime_UTR
TGTTTCAATAAATGAAGCTT+TGG 0.379583 1_4:-63941489 Msa0177110:three_prime_UTR
TGGTCATTGGTCCTTGCTGC+TGG 0.380714 1_4:+63950417 None:intergenic
ACCATTGGAAGGGTTGCTTC+TGG 0.385048 1_4:-63948413 Msa0177110:CDS
GAAATAATTAACATGAGAAT+AGG 0.385678 1_4:-63943183 Msa0177110:CDS
CATGTTAATTATTTCTCCAT+TGG 0.386598 1_4:+63943191 None:intergenic
AATTGAAAACCCTTAGTTGC+GGG 0.393669 1_4:+63943571 None:intergenic
TTCTCTGCATATTCAGGGTC+TGG 0.396812 1_4:+63945283 None:intergenic
TTTACAGAGATTCGGGCAGC+TGG 0.397683 1_4:-63949293 Msa0177110:intron
CTCATGGTCAATTAAGTCTT+CGG 0.397981 1_4:+63946528 None:intergenic
TAAAATACTCTCAGGAGTTT+CGG 0.400065 1_4:-63948880 Msa0177110:CDS
AATAAAATACTCTTTGTTTG+AGG 0.401489 1_4:+63950222 None:intergenic
TGTCTGCTTTGGTAAGTTGT+TGG 0.406083 1_4:+63950440 None:intergenic
TGGGTGCATATATCAGTAAT+TGG 0.408539 1_4:-63941859 Msa0177110:three_prime_UTR
AAGGAAGGAAGAGAAAGAAT+TGG 0.410927 1_4:+63950104 None:intergenic
AATACTCTTTGTTTGAGGTT+CGG 0.412112 1_4:+63950227 None:intergenic
TATGTCATTGCCCGCAACTA+AGG 0.414702 1_4:-63943581 Msa0177110:CDS
GGAGGAGAGGGATCGGAGAT+TGG 0.418731 1_4:+63950071 None:intergenic
GGTACTTGTGGACCAATTGA+TGG 0.418936 1_4:-63941982 Msa0177110:CDS
GGAAGGAGTGAGGAAGGGTT+TGG 0.419419 1_4:+63950131 None:intergenic
AGGGATCGGAGATTGGAATT+GGG 0.422790 1_4:+63950078 None:intergenic
TCCAAGAACTGGATCTCTTA+AGG 0.423067 1_4:+63941763 None:intergenic
AGGAAGAGAAAGAATTGGTT+CGG 0.427377 1_4:+63950109 None:intergenic
TCATGGTCAATTAAGTCTTC+GGG 0.427778 1_4:+63946529 None:intergenic
CTTTGTTTGAGGTTCGGTAA+TGG 0.430366 1_4:+63950233 None:intergenic
GTATGGTGTCAGATCAGTTC+AGG 0.431140 1_4:-63948548 Msa0177110:intron
AAACCGCTCTGGTGGGATAC+AGG 0.446252 1_4:-63943332 Msa0177110:intron
AGTTGTTGGTGAGTCGAGAA+TGG 0.450017 1_4:+63950454 None:intergenic
GGTAGAGGCCATGGTAGCTT+TGG 0.452564 1_4:-63942003 Msa0177110:CDS
ATACATATATATATGTTTGC+GGG 0.452751 1_4:-63941719 Msa0177110:three_prime_UTR
GGAAGAGAAAGAATTGGTTC+GGG 0.453667 1_4:+63950110 None:intergenic
TGACAAACTTGAAGCTGAGT+TGG 0.456051 1_4:-63943614 Msa0177110:CDS
ACGACATGCAGTCCAAGAAC+TGG 0.457953 1_4:+63941752 None:intergenic
GGTTCGGGAAGGAGTGAGGA+AGG 0.464724 1_4:+63950125 None:intergenic
GCAACCTATGACATGAAGTA+TGG 0.467320 1_4:-63948565 Msa0177110:CDS
GTGCATGTTGTGCCATCAAT+TGG 0.469901 1_4:+63941970 None:intergenic
GTGCCTTTCTGAGAATGAAA+TGG 0.471450 1_4:-63941879 Msa0177110:exon
GTTGTAATTCGGCTTTGACC+TGG 0.476712 1_4:+63948927 None:intergenic
CAGTATTGGGCACAAATACA+TGG 0.482313 1_4:+63948748 None:intergenic
TTGGGCACAAATACATGGAT+TGG 0.483473 1_4:+63948753 None:intergenic
GGTAGACGGAGGAGAGGGAT+CGG 0.486339 1_4:+63950064 None:intergenic
CGTGGGCAGTAACTGGGAAA+TGG 0.488897 1_4:-63950374 Msa0177110:five_prime_UTR
TGTTTCTAATTTGGCTGACA+AGG 0.491775 1_4:+63941908 None:intergenic
GGTGTTGGATGTGTCATTGA+TGG 0.495772 1_4:-63949215 Msa0177110:CDS
CCGAATTACAACTCCCAGAA+AGG 0.500551 1_4:-63948916 Msa0177110:CDS
ATTGGAATTGGGAGAAAGGA+AGG 0.503710 1_4:+63950089 None:intergenic
AGGAGTGAGGAAGGGTTTGG+TGG 0.507069 1_4:+63950134 None:intergenic
GTGAGTCGAGAATGGGAAGA+TGG 0.507831 1_4:+63950462 None:intergenic
GTTGTTGGTGAGTCGAGAAT+GGG 0.508037 1_4:+63950455 None:intergenic
CACCCATTTCATTCTCAGAA+AGG 0.510134 1_4:+63941876 None:intergenic
GAATCTCATGGAGGAGGTGT+TGG 0.513832 1_4:-63949230 Msa0177110:CDS
TGAGACACTGACACTTGATC+AGG 0.515093 1_4:-63946509 Msa0177110:intron
AACTCCTATATTTAGGGTGG+TGG 0.515942 1_4:-63948455 Msa0177110:intron
GGAGATTGGAATTGGGAGAA+AGG 0.519246 1_4:+63950085 None:intergenic
AATTGGTTCGGGAAGGAGTG+AGG 0.520671 1_4:+63950121 None:intergenic
GGGCAGCTGGGAGTACATAT+GGG 0.522096 1_4:-63949280 Msa0177110:CDS
CATGGTAGCTTTGGTACTTG+TGG 0.522487 1_4:-63941994 Msa0177110:CDS
TCATCTTCTCTGCATATTCA+GGG 0.523950 1_4:+63945278 None:intergenic
GGCTGAGATACCAACCTCTC+GGG 0.524544 1_4:+63942400 None:intergenic
ACTACTACGATTTCATATGC+TGG 0.525508 1_4:-63950324 Msa0177110:five_prime_UTR
ACGGAGGTAGACGGAGGAGA+GGG 0.527565 1_4:+63950059 None:intergenic
TTCTTGTAAATCAAAGTTCG+CGG 0.527748 1_4:+63941932 None:intergenic
GACGGAGGTAGACGGAGGAG+AGG 0.531416 1_4:+63950058 None:intergenic
TTAATTGCAGGAGTTACTAC+AGG 0.532875 1_4:-63948780 Msa0177110:intron
GATACATGTAAAATACTCTC+AGG 0.533691 1_4:-63948888 Msa0177110:CDS
GATACATATATATATGTTTG+CGG 0.533727 1_4:-63941720 Msa0177110:three_prime_UTR
GTTCTTGTGTATAGGAGGCC+AGG 0.534576 1_4:-63948945 Msa0177110:intron
TGTCATAGGTTGCATCCGCA+TGG 0.536508 1_4:+63948575 None:intergenic
TGCCTTTCTGAGAATGAAAT+GGG 0.536957 1_4:-63941878 Msa0177110:exon
GACACCATACTTCATGTCAT+AGG 0.537696 1_4:+63948561 None:intergenic
TCTTGTAAATCAAAGTTCGC+GGG 0.540183 1_4:+63941933 None:intergenic
ATGTCATTGCCCGCAACTAA+GGG 0.549586 1_4:-63943580 Msa0177110:CDS
TCTTCTGCTAGGGAAACCAT+TGG 0.551202 1_4:-63948428 Msa0177110:CDS
GTTCGGGAAGGAGTGAGGAA+GGG 0.556610 1_4:+63950126 None:intergenic
AATCAGGGTGGAATTTCCAA+TGG 0.556969 1_4:-63943207 Msa0177110:intron
AAAAGTTGAATTGAATTGGT+TGG 0.558126 1_4:+63950278 None:intergenic
AAGCCACGTGGGCAGTAACT+GGG 0.560152 1_4:-63950380 Msa0177110:five_prime_UTR
GTGGTGGTAGATCTTCTGCT+AGG 0.562776 1_4:-63948439 Msa0177110:CDS
GAAACGAGGACGGAGGTAGA+CGG 0.563398 1_4:+63950050 None:intergenic
CCTGTGCACTTGAGAGACAT+AGG 0.564384 1_4:+63946561 None:intergenic
TGCAGCTGTACCCATGGTAG+AGG 0.565756 1_4:-63942018 Msa0177110:intron
CTCTGAAGCTGATATGCAAG+AGG 0.568295 1_4:-63949171 Msa0177110:CDS
AGCTACCATGGCCTCTACCA+TGG 0.568585 1_4:+63942007 None:intergenic
ACCAGAAGCAACCCTTCCAA+TGG 0.569596 1_4:+63948412 None:intergenic
CCTATGTCTCTCAAGTGCAC+AGG 0.572163 1_4:-63946561 Msa0177110:CDS
CAACCTCTCGGGACAACACA+GGG 0.572864 1_4:+63942411 None:intergenic
CATATGTTGTAACCCGAAAG+TGG 0.573615 1_4:+63949255 None:intergenic
ACAAGAACAAACCGCTCTGG+TGG 0.573699 1_4:-63943340 Msa0177110:CDS
ACAGGGATCATGACGACCAC+GGG 0.574091 1_4:+63942428 None:intergenic
TGCTAGGGAAACCATTGGAA+GGG 0.574957 1_4:-63948423 Msa0177110:CDS
TGTACCCATGGTAGAGGCCA+TGG 0.577435 1_4:-63942012 Msa0177110:CDS
GTCATAGGTTGCATCCGCAT+GGG 0.577755 1_4:+63948576 None:intergenic
CTGCTAGGGAAACCATTGGA+AGG 0.577836 1_4:-63948424 Msa0177110:CDS
GTGAAAGGTGATTCTGTTGG+TGG 0.578147 1_4:-63945232 Msa0177110:CDS
CAACAGAATCACCTTTCACT+CGG 0.578783 1_4:+63945236 None:intergenic
GAGAAAGAATTGGTTCGGGA+AGG 0.581000 1_4:+63950114 None:intergenic
AGGACAAGAACAAACCGCTC+TGG 0.581332 1_4:-63943343 Msa0177110:CDS
TGGTGGTAGATCTTCTGCTA+GGG 0.582067 1_4:-63948438 Msa0177110:CDS
ACAACATATGGAGAATCTCA+TGG 0.584104 1_4:-63949242 Msa0177110:CDS
TTATATAGATCAAAATGGAA+AGG 0.585581 1_4:-63943368 Msa0177110:CDS
GATCAAGTGTCAGTGTCTCA+TGG 0.586576 1_4:+63946512 None:intergenic
ATTGATGCTGTCCGAGTGAA+AGG 0.587265 1_4:-63945247 Msa0177110:CDS
GCTACCATGGCCTCTACCAT+GGG 0.587349 1_4:+63942008 None:intergenic
TGCATATCAGCTTCAGAGAG+AGG 0.589694 1_4:+63949176 None:intergenic
TTACAGAGATTCGGGCAGCT+GGG 0.592616 1_4:-63949292 Msa0177110:intron
CAAGGACCAATGACCAAACA+AGG 0.593927 1_4:-63950410 Msa0177110:five_prime_UTR
AGCATATGAAATCGTAGTAG+TGG 0.594081 1_4:+63950326 None:intergenic
GCTTCAGAGAGAGGGAGGCG+AGG 0.596196 1_4:+63949185 None:intergenic
GCATATCAGCTTCAGAGAGA+GGG 0.596658 1_4:+63949177 None:intergenic
GAAGCAATCTACAGTGACTC+GGG 0.598566 1_4:-63942475 Msa0177110:CDS
AGTAACTGGGAAATGGTGGT+AGG 0.600229 1_4:-63950367 Msa0177110:five_prime_UTR
ATTGAATTGGTTGGTGACAA+TGG 0.602482 1_4:+63950287 None:intergenic
GTGCCCAATACTGATCAAAG+AGG 0.603337 1_4:-63948738 Msa0177110:CDS
CACAAGTACCAAAGCTACCA+TGG 0.605561 1_4:+63941995 None:intergenic
CACAGGGATCATGACGACCA+CGG 0.605920 1_4:+63942427 None:intergenic
TGAACTTGCAGCTGTACCCA+TGG 0.607274 1_4:-63942024 Msa0177110:intron
TATGGAGAATCTCATGGAGG+AGG 0.607485 1_4:-63949236 Msa0177110:CDS
TAGGTTGCATCCGCATGGGA+AGG 0.607769 1_4:+63948580 None:intergenic
ATACTCTCAGGAGTTTCGGA+AGG 0.610665 1_4:-63948876 Msa0177110:intron
AGAAGCAATCTACAGTGACT+CGG 0.610730 1_4:-63942476 Msa0177110:CDS
CCAACCTCTCGGGACAACAC+AGG 0.611393 1_4:+63942410 None:intergenic
AGCTTATAGGCCTTCCCATG+CGG 0.616697 1_4:-63948590 Msa0177110:CDS
GTGAATCCAAGAAGTGAACA+AGG 0.618188 1_4:-63950501 Msa0177110:five_prime_UTR
GGTGGAGATCGAAGAAGCCA+TGG 0.622096 1_4:+63950152 None:intergenic
AAATTGAAAACCCTTAGTTG+CGG 0.624146 1_4:+63943570 None:intergenic
TCAGAGAGAGGGAGGCGAGG+AGG 0.627324 1_4:+63949188 None:intergenic
TGCAAGAGGATCTTGACAGA+AGG 0.632234 1_4:-63949157 Msa0177110:intron
CAAGAACAAACCGCTCTGGT+GGG 0.632701 1_4:-63943339 Msa0177110:CDS
TGTTTGAGGTTCGGTAATGG+TGG 0.641901 1_4:+63950236 None:intergenic
GGGCAGTAACTGGGAAATGG+TGG 0.642610 1_4:-63950371 Msa0177110:five_prime_UTR
CTTACTGTAATAGTCGATGT+CGG 0.643905 1_4:+63943153 None:intergenic
TATCAGCTTCAGAGAGAGGG+AGG 0.644707 1_4:+63949180 None:intergenic
CAAAGCAGACACCAGCAGCA+AGG 0.646843 1_4:-63950428 Msa0177110:five_prime_UTR
TAGATCAAAATGGAAAGGTG+AGG 0.648351 1_4:-63943363 Msa0177110:CDS
AATAGCAATAGCAATAGCCA+TGG 0.652972 1_4:-63950169 Msa0177110:exon
TTTCCCAGTTACTGCCCACG+TGG 0.653902 1_4:+63950377 None:intergenic
CGAGTGAAAGGTGATTCTGT+TGG 0.682023 1_4:-63945235 Msa0177110:CDS
GAAACAGAGCTCATAGCCCG+TGG 0.694287 1_4:-63942444 Msa0177110:CDS
ACGAGGACGGAGGTAGACGG+AGG 0.699102 1_4:+63950053 None:intergenic
GTGTTGTAACATGCATTGTG+AGG 0.723456 1_4:-63945210 Msa0177110:CDS
GATCCCTGTGTTGTCCCGAG+AGG 0.731256 1_4:-63942414 Msa0177110:intron
ACATATGGAGAATCTCATGG+AGG 0.763629 1_4:-63949239 Msa0177110:CDS
ATACCTGTATCCCACCAGAG+CGG 0.816288 1_4:+63943329 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATTTAAAAAAAAAAAA+AGG + chr1_4:63949827-63949846 None:intergenic 0.0%
!!! TTTTTTTTTAATTAATATAA+AGG - chr1_4:63950331-63950350 Msa0177110:five_prime_UTR 0.0%
!! AAAAATACTAATAAAATTCA+AGG + chr1_4:63947566-63947585 None:intergenic 10.0%
!! ATATTTACTAAATTAATTTC+TGG + chr1_4:63947913-63947932 None:intergenic 10.0%
!! TATTTAAATATCAAATAACA+GGG + chr1_4:63948132-63948151 None:intergenic 10.0%
!! TTATTTAAATATCAAATAAC+AGG + chr1_4:63948133-63948152 None:intergenic 10.0%
!!! TATTGTTTATATTTAAAATC+AGG - chr1_4:63948784-63948803 Msa0177110:intron 10.0%
!!! ATTGTTTATATTTAAAATCA+GGG - chr1_4:63948785-63948804 Msa0177110:intron 10.0%
!! TATACATTAATTAATATTGA+GGG + chr1_4:63949077-63949096 None:intergenic 10.0%
!!! AACATAAAACTTTAAAAAAT+GGG + chr1_4:63949664-63949683 None:intergenic 10.0%
!!! AAAATTTCGTAATTTTTTAT+TGG - chr1_4:63949958-63949977 Msa0177110:intron 10.0%
!! ATAAAAACAATTCAAACAAA+CGG + chr1_4:63942023-63942042 None:intergenic 15.0%
!! GAATTTCAACATTATTAAAT+TGG - chr1_4:63942311-63942330 Msa0177110:intron 15.0%
!! TGAGAATTGAAAAAAATATA+TGG - chr1_4:63942493-63942512 Msa0177110:intron 15.0%
!! AAAGAAATTTAACATTAGTA+TGG + chr1_4:63943689-63943708 None:intergenic 15.0%
!!! TTTCTTTAATGTTTTTTAAC+AGG - chr1_4:63943702-63943721 Msa0177110:intron 15.0%
!! TGATTAAAACGAATATTATA+GGG + chr1_4:63944216-63944235 None:intergenic 15.0%
!! ATGATTAAAACGAATATTAT+AGG + chr1_4:63944217-63944236 None:intergenic 15.0%
!! ATTTGATATAACAATTTGTA+TGG - chr1_4:63946090-63946109 Msa0177110:intron 15.0%
!! TGTATAAATAAATATCTCAA+AGG - chr1_4:63946131-63946150 Msa0177110:intron 15.0%
!! GTATAAATAAATATCTCAAA+GGG - chr1_4:63946132-63946151 Msa0177110:intron 15.0%
!! TATAAATAAATATCTCAAAG+GGG - chr1_4:63946133-63946152 Msa0177110:intron 15.0%
!!! TTTTATGCATTTTATCTTAA+AGG + chr1_4:63946222-63946241 None:intergenic 15.0%
!!! TTTAAGATAAAATGCATAAA+AGG - chr1_4:63946221-63946240 Msa0177110:intron 15.0%
!!! CTCTTTTTGTATTTATTTAT+TGG - chr1_4:63946375-63946394 Msa0177110:intron 15.0%
!! TAAAATAAGTAGTATGAATT+AGG + chr1_4:63946469-63946488 None:intergenic 15.0%
!!! TAATGTTACTTTTTCTTTTT+TGG - chr1_4:63946574-63946593 Msa0177110:intron 15.0%
!!! AATTTGTTAATTTGTCAATT+TGG - chr1_4:63947444-63947463 Msa0177110:intron 15.0%
!!! TAGTTGTTAATTTGTTAATT+GGG - chr1_4:63947467-63947486 Msa0177110:intron 15.0%
!! TATAAAGTTACAAATCAATA+GGG + chr1_4:63948202-63948221 None:intergenic 15.0%
!! ATATAAAGTTACAAATCAAT+AGG + chr1_4:63948203-63948222 None:intergenic 15.0%
!! TAAAAAAAATTACATTGATC+AGG + chr1_4:63948534-63948553 None:intergenic 15.0%
!!! GAATTTTATATAGATCAAAA+TGG - chr1_4:63948634-63948653 Msa0177110:intron 15.0%
!! ATACATTAATTAATATTGAG+GGG + chr1_4:63949076-63949095 None:intergenic 15.0%
!! GTATACATTAATTAATATTG+AGG + chr1_4:63949078-63949097 None:intergenic 15.0%
!!! CAACATAAAACTTTAAAAAA+TGG + chr1_4:63949665-63949684 None:intergenic 15.0%
!! GTTGAAATTTAATAGAAAAT+CGG + chr1_4:63949902-63949921 None:intergenic 15.0%
!! CAAAGAAAAAAAAAATAACA+TGG + chr1_4:63950364-63950383 None:intergenic 15.0%
!!! ATGTATTTTTTATAGTGAAT+TGG - chr1_4:63950436-63950455 Msa0177110:five_prime_UTR 15.0%
!!! AATAAAATACTCTTTGTTTG+AGG + chr1_4:63941788-63941807 None:intergenic 20.0%
!! ACAACATTAAGATTGAAAAA+TGG + chr1_4:63942123-63942142 None:intergenic 20.0%
!! TTTCAACATTATTAAATTGG+CGG - chr1_4:63942314-63942333 Msa0177110:intron 20.0%
!! TTGAAGTTGAAAATAAAACT+GGG + chr1_4:63942540-63942559 None:intergenic 20.0%
!!! TTTGAAGTTGAAAATAAAAC+TGG + chr1_4:63942541-63942560 None:intergenic 20.0%
!!! ATTTTATTGAAATGCTAGTA+AGG - chr1_4:63942960-63942979 Msa0177110:intron 20.0%
!!! TTTTATTGAAATGCTAGTAA+GGG - chr1_4:63942961-63942980 Msa0177110:intron 20.0%
!!! CTTTAAAGAATAACATTGTA+AGG - chr1_4:63943040-63943059 Msa0177110:intron 20.0%
!! TCGTATAATTTATTAATTGC+AGG - chr1_4:63943215-63943234 Msa0177110:intron 20.0%
!! TGTTCAGAAATATTCAATAA+AGG - chr1_4:63943311-63943330 Msa0177110:intron 20.0%
!!! CTAATAAAATGTTGTACTTT+TGG - chr1_4:63943362-63943381 Msa0177110:CDS 20.0%
!! AAAATCCTTAAAAAATTTGC+AGG - chr1_4:63943630-63943649 Msa0177110:CDS 20.0%
!! CTGTATTGTTCTTTAATTAA+TGG + chr1_4:63943805-63943824 None:intergenic 20.0%
!!! ACTTCTTCTTTCTTATTTAT+GGG - chr1_4:63943889-63943908 Msa0177110:intron 20.0%
!! CAAGATACATATGAAAAATT+AGG - chr1_4:63944110-63944129 Msa0177110:intron 20.0%
!!! ATATACTGGTTATTTTGTTT+TGG - chr1_4:63944162-63944181 Msa0177110:intron 20.0%
!!! TATAGGAGATTATATTTTCT+GGG + chr1_4:63944659-63944678 None:intergenic 20.0%
!!! AATGCAAACAGTTTTATAAA+AGG + chr1_4:63945564-63945583 None:intergenic 20.0%
!!! AATACTTTTTTATGGACATT+TGG - chr1_4:63945643-63945662 Msa0177110:intron 20.0%
!! ACTGAGTTTAAATTTAACAA+AGG + chr1_4:63945834-63945853 None:intergenic 20.0%
!! TGACAACATTATTAAGAAAA+TGG - chr1_4:63946008-63946027 Msa0177110:intron 20.0%
!! GACAACATTATTAAGAAAAT+GGG - chr1_4:63946009-63946028 Msa0177110:intron 20.0%
!! AATCATTAGATACAGTTATT+TGG + chr1_4:63946331-63946350 None:intergenic 20.0%
!!! TATCTAATGATTACTTTTCA+TGG - chr1_4:63946339-63946358 Msa0177110:intron 20.0%
!! AAATAAATACAAAAAGAGCA+AGG + chr1_4:63946373-63946392 None:intergenic 20.0%
!!! ATTATTTTTACTTGTCAGAA+AGG + chr1_4:63946848-63946867 None:intergenic 20.0%
!! AAATAATTCTGCAAGAAAAT+AGG - chr1_4:63946861-63946880 Msa0177110:intron 20.0%
!! AATAATTCTGCAAGAAAATA+GGG - chr1_4:63946862-63946881 Msa0177110:intron 20.0%
!!! TTAAAATGGTTTTAAGTGAA+GGG + chr1_4:63947253-63947272 None:intergenic 20.0%
!!! TTCACTTAAAACCATTTTAA+GGG - chr1_4:63947253-63947272 Msa0177110:intron 20.0%
!!! GTAGTTGTTAATTTGTTAAT+TGG - chr1_4:63947466-63947485 Msa0177110:intron 20.0%
!!! TGTGACTTTTATTTCAAATT+AGG - chr1_4:63947617-63947636 Msa0177110:intron 20.0%
!!! TGAATTTTGAGTAATGTTTA+AGG - chr1_4:63947649-63947668 Msa0177110:intron 20.0%
!! TGCAAATTTAATACTTGTAT+CGG + chr1_4:63948075-63948094 None:intergenic 20.0%
!! TAGCTTAATGAAATCTTTAT+AGG - chr1_4:63948580-63948599 Msa0177110:CDS 20.0%
!! TTATATAGATCAAAATGGAA+AGG - chr1_4:63948639-63948658 Msa0177110:intron 20.0%
!!! TAGAAACAACTAATTTGTTA+TGG + chr1_4:63948714-63948733 None:intergenic 20.0%
!! GAAATAATTAACATGAGAAT+AGG - chr1_4:63948824-63948843 Msa0177110:intron 20.0%
!! ACATTAGATTTATGTCTTTA+TGG + chr1_4:63949854-63949873 None:intergenic 20.0%
!! AAAGACATAAATCTAATGTT+AGG - chr1_4:63949855-63949874 Msa0177110:intron 20.0%
!! GATACATATATATATGTTTG+CGG - chr1_4:63950287-63950306 Msa0177110:five_prime_UTR 20.0%
!! ATACATATATATATGTTTGC+GGG - chr1_4:63950288-63950307 Msa0177110:five_prime_UTR 20.0%
! AAAAGTTGAATTGAATTGGT+TGG + chr1_4:63941732-63941751 None:intergenic 25.0%
! AATAAAGAGAAAAGAGAAAG+CGG + chr1_4:63942096-63942115 None:intergenic 25.0%
!!! ATTTTGGTACAGAAAAATTC+AGG + chr1_4:63942212-63942231 None:intergenic 25.0%
! ACTTCAAATTCCAATTAGTT+TGG - chr1_4:63942553-63942572 Msa0177110:intron 25.0%
!! TGATGTATTTTACAGAGATT+CGG - chr1_4:63942706-63942725 Msa0177110:intron 25.0%
! TTACAATAGTTATGAGAAGA+CGG + chr1_4:63942899-63942918 None:intergenic 25.0%
! TAGAGGAATAATGTATAAGA+TGG - chr1_4:63942937-63942956 Msa0177110:intron 25.0%
! TCTTTACAGTGTAATAAGTT+AGG - chr1_4:63943488-63943507 Msa0177110:intron 25.0%
!! CACTTCTTCTTTCTTATTTA+TGG - chr1_4:63943888-63943907 Msa0177110:intron 25.0%
!!! CAATGTGAATGATTTGTTTT+AGG + chr1_4:63944016-63944035 None:intergenic 25.0%
!! TCATCGTGTTTTCAATATTA+GGG + chr1_4:63944089-63944108 None:intergenic 25.0%
!! TTCATCGTGTTTTCAATATT+AGG + chr1_4:63944090-63944109 None:intergenic 25.0%
! TAACCAGTATATTATAGACA+AGG + chr1_4:63944154-63944173 None:intergenic 25.0%
! TGAAATGATATAGAGTGAAA+TGG - chr1_4:63944546-63944565 Msa0177110:intron 25.0%
!! GTATAGGAGATTATATTTTC+TGG + chr1_4:63944660-63944679 None:intergenic 25.0%
! TGGCTTATTAGATAAAGAAT+TGG - chr1_4:63944846-63944865 Msa0177110:intron 25.0%
!! ATTAGATAAAGAATTGGTCT+TGG - chr1_4:63944852-63944871 Msa0177110:intron 25.0%
!!! AGATCTGGTTTTTGATATAA+TGG + chr1_4:63944970-63944989 None:intergenic 25.0%
!!! CTAATAACTCTAAAACCTTT+TGG + chr1_4:63945035-63945054 None:intergenic 25.0%
! ATTGGTGAACAAAAAATTGA+GGG + chr1_4:63945194-63945213 None:intergenic 25.0%
! AAACACGTTAAACAGTTAAA+AGG + chr1_4:63945369-63945388 None:intergenic 25.0%
!!! AATGATATTTCTGGATGAAT+TGG + chr1_4:63945398-63945417 None:intergenic 25.0%
! AATTCATCCAGAAATATCAT+TGG - chr1_4:63945397-63945416 Msa0177110:intron 25.0%
!!! CTACTTTTAATTCCATTTCA+TGG - chr1_4:63945720-63945739 Msa0177110:intron 25.0%
! CAAAATCATTAGTTGTAACA+TGG + chr1_4:63945768-63945787 None:intergenic 25.0%
!! GTTACAACTAATGATTTTGT+CGG - chr1_4:63945769-63945788 Msa0177110:intron 25.0%
!!! ATGTATTGATTTGGTAGTAA+AGG - chr1_4:63946190-63946209 Msa0177110:intron 25.0%
!!! TGTATTGATTTGGTAGTAAA+GGG - chr1_4:63946191-63946210 Msa0177110:intron 25.0%
!! TTTTATCGGGAAACTATATT+TGG - chr1_4:63946930-63946949 Msa0177110:intron 25.0%
!!! CTTAAAATGGTTTTAAGTGA+AGG + chr1_4:63947254-63947273 None:intergenic 25.0%
!! CTTCACTTAAAACCATTTTA+AGG - chr1_4:63947252-63947271 Msa0177110:intron 25.0%
! TACAAAAATGACCCTTAAAA+TGG + chr1_4:63947267-63947286 None:intergenic 25.0%
!!! TTGTTAATTTGTTAATTGGG+AGG - chr1_4:63947470-63947489 Msa0177110:intron 25.0%
!!! TTTGTTACTTTAAGCTTTAG+AGG - chr1_4:63947524-63947543 Msa0177110:intron 25.0%
!! ATACGTGATATAGAATTTTG+TGG - chr1_4:63947931-63947950 Msa0177110:intron 25.0%
!!! TTAATTGCCATTGGTTTTTT+TGG + chr1_4:63947962-63947981 None:intergenic 25.0%
! TGAGTTTATTTAATTGCCAT+TGG + chr1_4:63947971-63947990 None:intergenic 25.0%
!! TTAATACTTGTATCGGTATA+TGG + chr1_4:63948068-63948087 None:intergenic 25.0%
! AAGAACAATCTAATAGTGAT+AGG + chr1_4:63948099-63948118 None:intergenic 25.0%
! ATAATAGGAATGAGAGAAAA+AGG - chr1_4:63948149-63948168 Msa0177110:intron 25.0%
!! CAATACAAACATAAAGTACT+TGG + chr1_4:63948296-63948315 None:intergenic 25.0%
!! AAATGACTTCATTATTTCTC+AGG - chr1_4:63948351-63948370 Msa0177110:intron 25.0%
!! AATGACTTCATTATTTCTCA+GGG - chr1_4:63948352-63948371 Msa0177110:intron 25.0%
!! GTTTATATTTAAAATCAGGG+TGG - chr1_4:63948788-63948807 Msa0177110:intron 25.0%
!! CATGTTAATTATTTCTCCAT+TGG + chr1_4:63948819-63948838 None:intergenic 25.0%
! TAAGTGTTAAAAGTTGTGTA+TGG - chr1_4:63948995-63949014 Msa0177110:intron 25.0%
! AAGTGTTAAAAGTTGTGTAT+GGG - chr1_4:63948996-63949015 Msa0177110:intron 25.0%
! ATTAATATTGAGGGGATATA+AGG + chr1_4:63949068-63949087 None:intergenic 25.0%
! TCTCATTCAAATAGAGAAAA+TGG + chr1_4:63949224-63949243 None:intergenic 25.0%
!! CAATGACTTTTAGATGATTT+AGG - chr1_4:63949437-63949456 Msa0177110:intron 25.0%
! AAATGGGATGAAAATAAGAT+AGG + chr1_4:63949648-63949667 None:intergenic 25.0%
!! GCAACAAATTTTGTAGTTTT+TGG - chr1_4:63950467-63950486 Msa0177110:five_prime_UTR 25.0%
! TGTTTCAATAAATGAAGCTT+TGG - chr1_4:63950518-63950537 Msa0177110:five_prime_UTR 25.0%
!! TTTTATCCTTGTTTGGTCAT+TGG + chr1_4:63941606-63941625 None:intergenic 30.0%
!!! TGGCTTTTTTTATCCTTGTT+TGG + chr1_4:63941613-63941632 None:intergenic 30.0%
TCGCAAAAGTTGAATTGAAT+TGG + chr1_4:63941736-63941755 None:intergenic 30.0%
! AATACTCTTTGTTTGAGGTT+CGG + chr1_4:63941783-63941802 None:intergenic 30.0%
!!! TACTAACGGAGTTGTTTTTT+GGG + chr1_4:63941983-63942002 None:intergenic 30.0%
!!! ATACTAACGGAGTTGTTTTT+TGG + chr1_4:63941984-63942003 None:intergenic 30.0%
ACATAGAGAGAGAATACTAA+CGG + chr1_4:63941997-63942016 None:intergenic 30.0%
! ACCAAAATTTTCCAGTTGTA+AGG - chr1_4:63942224-63942243 Msa0177110:intron 30.0%
! TCCTTACAACTGGAAAATTT+TGG + chr1_4:63942228-63942247 None:intergenic 30.0%
! AAATTTTCCAGTTGTAAGGA+TGG - chr1_4:63942228-63942247 Msa0177110:intron 30.0%
ACTGCAATGTCAATATTGTT+AGG - chr1_4:63942364-63942383 Msa0177110:intron 30.0%
TAGTCTCAAACCAAACTAAT+TGG + chr1_4:63942566-63942585 None:intergenic 30.0%
! GATGTATTTTACAGAGATTC+GGG - chr1_4:63942707-63942726 Msa0177110:intron 30.0%
AACTATTGTAAAAAGCCCTT+TGG - chr1_4:63942908-63942927 Msa0177110:intron 30.0%
CATTATGAATGATAGCTGAT+AGG - chr1_4:63942991-63943010 Msa0177110:intron 30.0%
ATTGTAAGGTTCTTGTGTAT+AGG - chr1_4:63943054-63943073 Msa0177110:intron 30.0%
GATACATGTAAAATACTCTC+AGG - chr1_4:63943119-63943138 Msa0177110:intron 30.0%
TAAAATACTCTCAGGAGTTT+CGG - chr1_4:63943127-63943146 Msa0177110:intron 30.0%
TTCTTCTTACTGCTATTAAC+TGG - chr1_4:63943161-63943180 Msa0177110:CDS 30.0%
TCTTCTTACTGCTATTAACT+GGG - chr1_4:63943162-63943181 Msa0177110:CDS 30.0%
TTTCCTCTTTGATCAGTATT+GGG + chr1_4:63943275-63943294 None:intergenic 30.0%
ATTTCCTCTTTGATCAGTAT+TGG + chr1_4:63943276-63943295 None:intergenic 30.0%
TTTATTAGCCACGTAAATCA+AGG + chr1_4:63943350-63943369 None:intergenic 30.0%
!!! GTACTTTTGGATACTTTTTC+AGG - chr1_4:63943375-63943394 Msa0177110:CDS 30.0%
ACATCTGAACTCCTATATTT+AGG - chr1_4:63943545-63943564 Msa0177110:intron 30.0%
CATCTGAACTCCTATATTTA+GGG - chr1_4:63943546-63943565 Msa0177110:intron 30.0%
!!! CAGTTCCTGCAAATTTTTTA+AGG + chr1_4:63943638-63943657 None:intergenic 30.0%
TAAAAAATTTGCAGGAACTG+AGG - chr1_4:63943638-63943657 Msa0177110:intron 30.0%
CTAACATGATAGATCATTCT+TGG + chr1_4:63943728-63943747 None:intergenic 30.0%
CAAGAATGATCTATCATGTT+AGG - chr1_4:63943726-63943745 Msa0177110:intron 30.0%
!!! GAGCTTTTTTAACCTTTCAA+TGG - chr1_4:63943757-63943776 Msa0177110:intron 30.0%
TTAACCTTTCAATGGAAACT+TGG - chr1_4:63943765-63943784 Msa0177110:intron 30.0%
AATACCAAGTTTCCATTGAA+AGG + chr1_4:63943772-63943791 None:intergenic 30.0%
TTTCAATGGAAACTTGGTAT+TGG - chr1_4:63943771-63943790 Msa0177110:intron 30.0%
TTCAATGGAAACTTGGTATT+GGG - chr1_4:63943772-63943791 Msa0177110:intron 30.0%
AAGAACAATACAGAACTTCA+AGG - chr1_4:63943812-63943831 Msa0177110:intron 30.0%
AGAACAATACAGAACTTCAA+GGG - chr1_4:63943813-63943832 Msa0177110:intron 30.0%
TGAGATAGTTGTAAGAAATG+AGG + chr1_4:63943922-63943941 None:intergenic 30.0%
! AAGTAGTTAGTTGGTTAGTT+GGG + chr1_4:63943946-63943965 None:intergenic 30.0%
! TATGTGTTTGTTAGGACATT+TGG + chr1_4:63943983-63944002 None:intergenic 30.0%
GGTGATATTATGTGTTTGTT+AGG + chr1_4:63943991-63944010 None:intergenic 30.0%
!!! GTGAATGATTTGTTTTAGGT+GGG + chr1_4:63944012-63944031 None:intergenic 30.0%
!!! TGTGAATGATTTGTTTTAGG+TGG + chr1_4:63944013-63944032 None:intergenic 30.0%
! GTTTTCAATATTAGGGAACT+TGG + chr1_4:63944082-63944101 None:intergenic 30.0%
TCACCTTGTCTATAATATAC+TGG - chr1_4:63944148-63944167 Msa0177110:intron 30.0%
! TTTGGTCCCTATAATTGTTT+TGG - chr1_4:63944180-63944199 Msa0177110:intron 30.0%
TTTCGGCCAAAACAATTATA+GGG + chr1_4:63944189-63944208 None:intergenic 30.0%
ATTTCGGCCAAAACAATTAT+AGG + chr1_4:63944190-63944209 None:intergenic 30.0%
!!! TATAATTGTTTTGGCCGAAA+TGG - chr1_4:63944189-63944208 Msa0177110:intron 30.0%
GAATATTATAGGGACCATTT+CGG + chr1_4:63944206-63944225 None:intergenic 30.0%
ATTGAGCTAGCTATTGTTAT+GGG + chr1_4:63944363-63944382 None:intergenic 30.0%
TATTGAGCTAGCTATTGTTA+TGG + chr1_4:63944364-63944383 None:intergenic 30.0%
! AATAGCTAGCTCAATAGTTT+TGG - chr1_4:63944368-63944387 Msa0177110:intron 30.0%
! GAATTCTTTAGAGACATGAA+TGG + chr1_4:63944416-63944435 None:intergenic 30.0%
ATTTCAGCTATAATGACCAA+AGG + chr1_4:63944532-63944551 None:intergenic 30.0%
AGAAACATTGCAGATACAAT+AGG + chr1_4:63944745-63944764 None:intergenic 30.0%
AAAAGTCCACTATATGAACA+TGG + chr1_4:63944784-63944803 None:intergenic 30.0%
!!! ATGTTCATATAGTGGACTTT+TGG - chr1_4:63944783-63944802 Msa0177110:intron 30.0%
TAAGCCATCAATGTTATCAA+TGG + chr1_4:63944833-63944852 None:intergenic 30.0%
AGAACAAAAAAAGGAAAGCT+GGG + chr1_4:63944888-63944907 None:intergenic 30.0%
ATAGGAAGGAGAACAAAAAA+AGG + chr1_4:63944897-63944916 None:intergenic 30.0%
! AAAACCAGATCTAGTAGTTT+TGG - chr1_4:63944978-63944997 Msa0177110:intron 30.0%
ATAACCAAAACTACTAGATC+TGG + chr1_4:63944985-63945004 None:intergenic 30.0%
!!! AGATCTAGTAGTTTTGGTTA+TGG - chr1_4:63944984-63945003 Msa0177110:intron 30.0%
CATATTACACAAGATCAGTA+TGG + chr1_4:63945121-63945140 None:intergenic 30.0%
CATTGGTGAACAAAAAATTG+AGG + chr1_4:63945195-63945214 None:intergenic 30.0%
TAACAGAATAAAGGAGTTCA+AGG + chr1_4:63945294-63945313 None:intergenic 30.0%
GTCAAGTAGTATTCTAAACA+TGG - chr1_4:63945596-63945615 Msa0177110:intron 30.0%
TTGAAATGCATTCCATGAAA+TGG + chr1_4:63945735-63945754 None:intergenic 30.0%
! GATTTTGTCGGAAGAAATTT+TGG - chr1_4:63945781-63945800 Msa0177110:intron 30.0%
GAGTACATTTATTCGAAATG+TGG + chr1_4:63945873-63945892 None:intergenic 30.0%
ACTAATGCACATTTAACAGT+TGG + chr1_4:63946054-63946073 None:intergenic 30.0%
!! GTATTGATTTGGTAGTAAAG+GGG - chr1_4:63946192-63946211 Msa0177110:intron 30.0%
CAGTTATTTGGTCAAAATAC+AGG + chr1_4:63946319-63946338 None:intergenic 30.0%
GGACAAATTCCAAAAAGTAA+TGG + chr1_4:63946678-63946697 None:intergenic 30.0%
GAACAATATTACTCTCAATC+TGG + chr1_4:63946699-63946718 None:intergenic 30.0%
TAAAACTCTGTTGTCAATAG+TGG - chr1_4:63947068-63947087 Msa0177110:intron 30.0%
! GAAATCCTGTATTTTACACA+GGG + chr1_4:63947231-63947250 None:intergenic 30.0%
ATGGAGAAGAGTAATAGTTA+GGG + chr1_4:63947300-63947319 None:intergenic 30.0%
!!! GATGAGATGGATTTTTTTGT+TGG + chr1_4:63947365-63947384 None:intergenic 30.0%
CAAGAGATTAGAACAAAGAT+GGG + chr1_4:63947417-63947436 None:intergenic 30.0%
TCAAGAGATTAGAACAAAGA+TGG + chr1_4:63947418-63947437 None:intergenic 30.0%
CACTATTAGATTGTTCTTTG+AGG - chr1_4:63948101-63948120 Msa0177110:intron 30.0%
!! TTAGATTGTTCTTTGAGGTA+TGG - chr1_4:63948106-63948125 Msa0177110:intron 30.0%
CATGCAAGTCGATATATAAA+AGG + chr1_4:63948228-63948247 None:intergenic 30.0%
AAATTGAAAACCCTTAGTTG+CGG + chr1_4:63948440-63948459 None:intergenic 30.0%
!!! TTTTTTTTAGCAGTTGTGTC+TGG - chr1_4:63948545-63948564 Msa0177110:intron 30.0%
!!! TTTTTTTAGCAGTTGTGTCT+GGG - chr1_4:63948546-63948565 Msa0177110:intron 30.0%
! TTTATAGGTACCTTTTTGAC+TGG - chr1_4:63948595-63948614 Msa0177110:CDS 30.0%
!! TTATAGGTACCTTTTTGACT+GGG - chr1_4:63948596-63948615 Msa0177110:CDS 30.0%
AGTAAGATTACGCAAACAAA+AGG + chr1_4:63949343-63949362 None:intergenic 30.0%
ACCTAAATCAGCTAAAAATG+GGG + chr1_4:63949401-63949420 None:intergenic 30.0%
CACCTAAATCAGCTAAAAAT+GGG + chr1_4:63949402-63949421 None:intergenic 30.0%
! TGACTTTTAGATGATTTAGG+TGG - chr1_4:63949440-63949459 Msa0177110:intron 30.0%
!! TTTCTTTTCTAGTGATGAGA+AGG + chr1_4:63949941-63949960 None:intergenic 30.0%
TTCTTGTAAATCAAAGTTCG+CGG + chr1_4:63950078-63950097 None:intergenic 30.0%
!! CACTTCTTCTGTTTCTAATT+TGG + chr1_4:63950111-63950130 None:intergenic 30.0%
! CAGAATGAAGATTTTATCTG+AGG + chr1_4:63950174-63950193 None:intergenic 30.0%
CTCAGATAAAATCTTCATTC+TGG - chr1_4:63950172-63950191 Msa0177110:exon 30.0%
TAACTTCCTTGTTCACTTCT+TGG + chr1_4:63941515-63941534 None:intergenic 35.0%
AAGGATAAAAAAAGCCACGT+GGG - chr1_4:63941616-63941635 Msa0177110:three_prime_UTR 35.0%
AGCATATGAAATCGTAGTAG+TGG + chr1_4:63941684-63941703 None:intergenic 35.0%
ACTACTACGATTTCATATGC+TGG - chr1_4:63941683-63941702 Msa0177110:three_prime_UTR 35.0%
!! ATTGAATTGGTTGGTGACAA+TGG + chr1_4:63941723-63941742 None:intergenic 35.0%
! TGGCTATTGCTATTGCTATT+GGG + chr1_4:63941838-63941857 None:intergenic 35.0%
! ATGGCTATTGCTATTGCTAT+TGG + chr1_4:63941839-63941858 None:intergenic 35.0%
AATAGCAATAGCAATAGCCA+TGG - chr1_4:63941838-63941857 Msa0177110:three_prime_UTR 35.0%
AGGAAGAGAAAGAATTGGTT+CGG + chr1_4:63941901-63941920 None:intergenic 35.0%
AAGGAAGGAAGAGAAAGAAT+TGG + chr1_4:63941906-63941925 None:intergenic 35.0%
!!! ACTAACGGAGTTGTTTTTTG+GGG + chr1_4:63941982-63942001 None:intergenic 35.0%
ATGAATTCCATCCTTACAAC+TGG + chr1_4:63942238-63942257 None:intergenic 35.0%
CAATGTCAATATTGTTAGGC+TGG - chr1_4:63942368-63942387 Msa0177110:intron 35.0%
TTAATCACACAAGCTGATGT+AGG - chr1_4:63942445-63942464 Msa0177110:CDS 35.0%
TCTTAGGAAGTCTAGACTAA+TGG - chr1_4:63942642-63942661 Msa0177110:intron 35.0%
ACTAATGGTACTGTGATTGA+TGG - chr1_4:63942657-63942676 Msa0177110:intron 35.0%
ACAACATATGGAGAATCTCA+TGG - chr1_4:63942765-63942784 Msa0177110:intron 35.0%
! AGACGGTGAGATAATTTTGA+AGG + chr1_4:63942882-63942901 None:intergenic 35.0%
TATTGTAAAAAGCCCTTTGG+AGG - chr1_4:63942911-63942930 Msa0177110:intron 35.0%
TTAATTGCAGGAGTTACTAC+AGG - chr1_4:63943227-63943246 Msa0177110:intron 35.0%
GTGGTCATTAGATAGGAAAT+GGG + chr1_4:63943864-63943883 None:intergenic 35.0%
TGTGGTCATTAGATAGGAAA+TGG + chr1_4:63943865-63943884 None:intergenic 35.0%
!! AAGAAAGAAGAAGTGTCATG+TGG + chr1_4:63943883-63943902 None:intergenic 35.0%
CAAGTAGTTAGTTGGTTAGT+TGG + chr1_4:63943947-63943966 None:intergenic 35.0%
GGGTTTATCAAGTAGTTAGT+TGG + chr1_4:63943955-63943974 None:intergenic 35.0%
TGTTAGGACATTTGGTAAGA+GGG + chr1_4:63943975-63943994 None:intergenic 35.0%
TTGTTAGGACATTTGGTAAG+AGG + chr1_4:63943976-63943995 None:intergenic 35.0%
CTTGGTAAGTGATCATATTC+TGG + chr1_4:63944505-63944524 None:intergenic 35.0%
ATAATGACCAAAGGTTCTCT+TGG + chr1_4:63944523-63944542 None:intergenic 35.0%
! CAACTCTAAGGAAGACAAAA+GGG + chr1_4:63944629-63944648 None:intergenic 35.0%
! ACTATATGAACATGGTGTTG+CGG + chr1_4:63944776-63944795 None:intergenic 35.0%
!!! TCATATAGTGGACTTTTGGT+TGG - chr1_4:63944787-63944806 Msa0177110:intron 35.0%
TCAATGTTATCAATGGCGAA+TGG + chr1_4:63944826-63944845 None:intergenic 35.0%
! TTCGCCATTGATAACATTGA+TGG - chr1_4:63944826-63944845 Msa0177110:intron 35.0%
GAGAACAAAAAAAGGAAAGC+TGG + chr1_4:63944889-63944908 None:intergenic 35.0%
! TGTTGCAGAAAAGCATGAAT+AGG + chr1_4:63944915-63944934 None:intergenic 35.0%
TTGTTCTAGTACTTGCACAA+AGG + chr1_4:63945070-63945089 None:intergenic 35.0%
TTTGTGCAAGTACTAGAACA+AGG - chr1_4:63945069-63945088 Msa0177110:intron 35.0%
TTGTGCAAGTACTAGAACAA+GGG - chr1_4:63945070-63945089 Msa0177110:intron 35.0%
TACACAAGATCAGTATGGAT+AGG + chr1_4:63945116-63945135 None:intergenic 35.0%
AACAAAAAATTGAGGGAGAG+GGG + chr1_4:63945187-63945206 None:intergenic 35.0%
GAACAAAAAATTGAGGGAGA+GGG + chr1_4:63945188-63945207 None:intergenic 35.0%
TGAACAAAAAATTGAGGGAG+AGG + chr1_4:63945189-63945208 None:intergenic 35.0%
TGGTTGAGCTAACAGAATAA+AGG + chr1_4:63945303-63945322 None:intergenic 35.0%
GACTTAGCCAATGATATTTC+TGG + chr1_4:63945407-63945426 None:intergenic 35.0%
TCATGGTCAATTAAGTCTTC+GGG + chr1_4:63945481-63945500 None:intergenic 35.0%
CTCATGGTCAATTAAGTCTT+CGG + chr1_4:63945482-63945501 None:intergenic 35.0%
GAAAAAGTTTCAGTTCACAG+AGG - chr1_4:63945912-63945931 Msa0177110:intron 35.0%
ACGACTGATGAGTATTACTA+AGG - chr1_4:63945982-63946001 Msa0177110:intron 35.0%
TGCACATTTAACAGTTGGAA+TGG + chr1_4:63946049-63946068 None:intergenic 35.0%
TCATCTTCTCTGCATATTCA+GGG + chr1_4:63946732-63946751 None:intergenic 35.0%
ATCATCTTCTCTGCATATTC+AGG + chr1_4:63946733-63946752 None:intergenic 35.0%
TAAAAGTGATAACAACCACG+AGG - chr1_4:63946906-63946925 Msa0177110:intron 35.0%
AAAAGTGATAACAACCACGA+GGG - chr1_4:63946907-63946926 Msa0177110:intron 35.0%
!! TTTGGCTTTCTGAATTTCAG+CGG - chr1_4:63946948-63946967 Msa0177110:intron 35.0%
! GCGTTGCATTTTTCCATTTT+TGG + chr1_4:63947109-63947128 None:intergenic 35.0%
TACAACCCTGTGTAAAATAC+AGG - chr1_4:63947223-63947242 Msa0177110:intron 35.0%
! GGAAATCCTGTATTTTACAC+AGG + chr1_4:63947232-63947251 None:intergenic 35.0%
GATGGAGAAGAGTAATAGTT+AGG + chr1_4:63947301-63947320 None:intergenic 35.0%
TTAAACCTCTGTTGTCAAAG+CGG + chr1_4:63947814-63947833 None:intergenic 35.0%
GGAAACTCCAAAAAAACCAA+TGG - chr1_4:63947952-63947971 Msa0177110:intron 35.0%
AAGGTAAGATTCCAAACTCA+TGG + chr1_4:63948025-63948044 None:intergenic 35.0%
TGATACAGCAAAAATCTGGA+AGG + chr1_4:63948044-63948063 None:intergenic 35.0%
TGGATGATACAGCAAAAATC+TGG + chr1_4:63948048-63948067 None:intergenic 35.0%
TTGCATGCCTGATATCTTAT+AGG - chr1_4:63948241-63948260 Msa0177110:intron 35.0%
GGAAATGCCTATAAGATATC+AGG + chr1_4:63948251-63948270 None:intergenic 35.0%
TTGGTTGCAAAACAATGCTA+AGG + chr1_4:63948277-63948296 None:intergenic 35.0%
! TTCATTATTTCTCAGGGTCT+TGG - chr1_4:63948358-63948377 Msa0177110:intron 35.0%
! GCTTCAAGTTTGTCAAATAC+TGG + chr1_4:63948388-63948407 None:intergenic 35.0%
AATTGAAAACCCTTAGTTGC+GGG + chr1_4:63948439-63948458 None:intergenic 35.0%
! GCAACTAAGGGTTTTCAATT+TGG - chr1_4:63948439-63948458 Msa0177110:CDS 35.0%
! AAGGGTTTTCAATTTGGTAG+TGG - chr1_4:63948445-63948464 Msa0177110:intron 35.0%
!! AGGGTTTTCAATTTGGTAGT+GGG - chr1_4:63948446-63948465 Msa0177110:intron 35.0%
GCATAAGCAAGTTTCAATAC+CGG + chr1_4:63948476-63948495 None:intergenic 35.0%
!!! TTTTTTAGCAGTTGTGTCTG+GGG - chr1_4:63948547-63948566 Msa0177110:intron 35.0%
TAGATCAAAATGGAAAGGTG+AGG - chr1_4:63948644-63948663 Msa0177110:intron 35.0%
CTTACTGTAATAGTCGATGT+CGG + chr1_4:63948857-63948876 None:intergenic 35.0%
CATATCAAAAACCAATGCCA+GGG - chr1_4:63948933-63948952 Msa0177110:CDS 35.0%
ATATCAAAAACCAATGCCAG+GGG - chr1_4:63948934-63948953 Msa0177110:CDS 35.0%
!! CTACACAGTTGATCTTGTTT+TGG + chr1_4:63949163-63949182 None:intergenic 35.0%
CAAAACAAGATCAACTGTGT+AGG - chr1_4:63949161-63949180 Msa0177110:CDS 35.0%
! GGTTAGACATGCTGTATTTT+CGG - chr1_4:63949300-63949319 Msa0177110:intron 35.0%
! GTTAGACATGCTGTATTTTC+GGG - chr1_4:63949301-63949320 Msa0177110:intron 35.0%
! TTAGACATGCTGTATTTTCG+GGG - chr1_4:63949302-63949321 Msa0177110:intron 35.0%
CTAAATCAGCTAAAAATGGG+GGG + chr1_4:63949399-63949418 None:intergenic 35.0%
CCTAAATCAGCTAAAAATGG+GGG + chr1_4:63949400-63949419 None:intergenic 35.0%
CCACCTAAATCAGCTAAAAA+TGG + chr1_4:63949403-63949422 None:intergenic 35.0%
!!! CCATTTTTAGCTGATTTAGG+TGG - chr1_4:63949400-63949419 Msa0177110:intron 35.0%
TGTCTCTGATAGCAATTCAT+CGG - chr1_4:63949683-63949702 Msa0177110:intron 35.0%
! CAATGTTAACTCGGTTCTAA+AGG + chr1_4:63949725-63949744 None:intergenic 35.0%
CTTTCAGGACAATGTTAACT+CGG + chr1_4:63949734-63949753 None:intergenic 35.0%
GAGTTAACATTGTCCTGAAA+GGG - chr1_4:63949733-63949752 Msa0177110:intron 35.0%
AAACATTATCTCACCCTTTC+AGG + chr1_4:63949749-63949768 None:intergenic 35.0%
! ATTTTCCCAGTAGATTGGAT+CGG + chr1_4:63949803-63949822 None:intergenic 35.0%
!! AAGGTATTTTCCCAGTAGAT+TGG + chr1_4:63949808-63949827 None:intergenic 35.0%
!! TTTTCTAGTGATGAGAAGGT+AGG + chr1_4:63949937-63949956 None:intergenic 35.0%
TCTTGTAAATCAAAGTTCGC+GGG + chr1_4:63950077-63950096 None:intergenic 35.0%
! TGTTTCTAATTTGGCTGACA+AGG + chr1_4:63950102-63950121 None:intergenic 35.0%
! TGCCTTTCTGAGAATGAAAT+GGG - chr1_4:63950129-63950148 Msa0177110:CDS 35.0%
TGGGTGCATATATCAGTAAT+TGG - chr1_4:63950148-63950167 Msa0177110:CDS 35.0%
GTGAATCCAAGAAGTGAACA+AGG - chr1_4:63941506-63941525 Msa0177110:three_prime_UTR 40.0%
TGTCTGCTTTGGTAAGTTGT+TGG + chr1_4:63941570-63941589 None:intergenic 40.0%
CAAGGATAAAAAAAGCCACG+TGG - chr1_4:63941615-63941634 Msa0177110:three_prime_UTR 40.0%
! CTTTGTTTGAGGTTCGGTAA+TGG + chr1_4:63941777-63941796 None:intergenic 40.0%
! GGAAGAGAAAGAATTGGTTC+GGG + chr1_4:63941900-63941919 None:intergenic 40.0%
ATTGGAATTGGGAGAAAGGA+AGG + chr1_4:63941921-63941940 None:intergenic 40.0%
!!! AGTTGTTTTTTGGGGAAACG+AGG + chr1_4:63941974-63941993 None:intergenic 40.0%
ATGAGCATGTAGTAGTAGCT+AGG + chr1_4:63942061-63942080 None:intergenic 40.0%
!! AATTCAGGTTGCACAAAGAG+TGG + chr1_4:63942197-63942216 None:intergenic 40.0%
ATTGACATTGCAGTTGAGCT+AGG + chr1_4:63942358-63942377 None:intergenic 40.0%
ATGGTACTGTGATTGATGGA+TGG - chr1_4:63942661-63942680 Msa0177110:intron 40.0%
! TGGTACTGTGATTGATGGAT+GGG - chr1_4:63942662-63942681 Msa0177110:intron 40.0%
GTACATATGGGAACCACTTT+CGG - chr1_4:63942739-63942758 Msa0177110:intron 40.0%
TACATATGGGAACCACTTTC+GGG - chr1_4:63942740-63942759 Msa0177110:intron 40.0%
CATATGTTGTAACCCGAAAG+TGG + chr1_4:63942755-63942774 None:intergenic 40.0%
!! CACTTTCGGGTTACAACATA+TGG - chr1_4:63942753-63942772 Msa0177110:intron 40.0%
ACATATGGAGAATCTCATGG+AGG - chr1_4:63942768-63942787 Msa0177110:intron 40.0%
ATTCCTCTATAGCCTCCAAA+GGG + chr1_4:63942926-63942945 None:intergenic 40.0%
TATTCCTCTATAGCCTCCAA+AGG + chr1_4:63942927-63942946 None:intergenic 40.0%
GTAAGGTTCTTGTGTATAGG+AGG - chr1_4:63943057-63943076 Msa0177110:intron 40.0%
! CCTTTCTGGGAGTTGTAATT+CGG + chr1_4:63943094-63943113 None:intergenic 40.0%
CATGTATCAGTCTCCTTTCT+GGG + chr1_4:63943107-63943126 None:intergenic 40.0%
ACATGTATCAGTCTCCTTTC+TGG + chr1_4:63943108-63943127 None:intergenic 40.0%
TTGGGCACAAATACATGGAT+TGG + chr1_4:63943257-63943276 None:intergenic 40.0%
! CAGTATTGGGCACAAATACA+TGG + chr1_4:63943262-63943281 None:intergenic 40.0%
AACCATGACCTTGATTTACG+TGG - chr1_4:63943339-63943358 Msa0177110:CDS 40.0%
! GCGAGATGTCATTAGCTTAT+AGG - chr1_4:63943404-63943423 Msa0177110:CDS 40.0%
GCAACCTATGACATGAAGTA+TGG - chr1_4:63943442-63943461 Msa0177110:intron 40.0%
GACACCATACTTCATGTCAT+AGG + chr1_4:63943449-63943468 None:intergenic 40.0%
CTGAACTCCTATATTTAGGG+TGG - chr1_4:63943549-63943568 Msa0177110:intron 40.0%
! AACTCCTATATTTAGGGTGG+TGG - chr1_4:63943552-63943571 Msa0177110:intron 40.0%
TCTACCACCACCCTAAATAT+AGG + chr1_4:63943559-63943578 None:intergenic 40.0%
GTGTCATGTGGTCATTAGAT+AGG + chr1_4:63943871-63943890 None:intergenic 40.0%
ACTGCAAGTTGTTCAACTTG+AGG + chr1_4:63944040-63944059 None:intergenic 40.0%
! TGTTTTCAGCTCCCATTTGA+TGG - chr1_4:63944290-63944309 Msa0177110:intron 40.0%
GATCCAGAAGTCCATCAAAT+GGG + chr1_4:63944304-63944323 None:intergenic 40.0%
TGAAGAAGGTCTATGAGATG+GGG + chr1_4:63944337-63944356 None:intergenic 40.0%
CTGAAGAAGGTCTATGAGAT+GGG + chr1_4:63944338-63944357 None:intergenic 40.0%
ACTGAAGAAGGTCTATGAGA+TGG + chr1_4:63944339-63944358 None:intergenic 40.0%
!! ATTGTTATGGGCACTGAAGA+AGG + chr1_4:63944351-63944370 None:intergenic 40.0%
! ATTTTCTCTCTCTCAGCAAG+AGG - chr1_4:63944450-63944469 Msa0177110:intron 40.0%
TCACTTACCAAGAGAACCTT+TGG - chr1_4:63944513-63944532 Msa0177110:intron 40.0%
ATAGAGTGAAATGGCCTACT+AGG - chr1_4:63944555-63944574 Msa0177110:intron 40.0%
AATTGAGAACCAGACCTAGT+AGG + chr1_4:63944572-63944591 None:intergenic 40.0%
AGACAAAAGGGTTAGAAAGC+AGG + chr1_4:63944617-63944636 None:intergenic 40.0%
! GCAACTCTAAGGAAGACAAA+AGG + chr1_4:63944630-63944649 None:intergenic 40.0%
TTGACGACATTGTAGGGTAT+AGG + chr1_4:63944676-63944695 None:intergenic 40.0%
GCAGATTTGACGACATTGTA+GGG + chr1_4:63944682-63944701 None:intergenic 40.0%
TGCAGATTTGACGACATTGT+AGG + chr1_4:63944683-63944702 None:intergenic 40.0%
! ACAATAGGTGTTGCAGTCAA+TGG + chr1_4:63944730-63944749 None:intergenic 40.0%
! ATCTGCAATGTTTCTGCCAT+AGG - chr1_4:63944750-63944769 Msa0177110:intron 40.0%
GCAACACCATGTTCATATAG+TGG - chr1_4:63944775-63944794 Msa0177110:intron 40.0%
! GCAGAAAAGCATGAATAGGA+AGG + chr1_4:63944911-63944930 None:intergenic 40.0%
!! GATATAATGGATGACTGCAG+AGG + chr1_4:63944957-63944976 None:intergenic 40.0%
TGTGCAAGTACTAGAACAAG+GGG - chr1_4:63945071-63945090 Msa0177110:intron 40.0%
ACAAGATCAGTATGGATAGG+AGG + chr1_4:63945113-63945132 None:intergenic 40.0%
AGGGGAGATATCTAGTAAGT+AGG + chr1_4:63945169-63945188 None:intergenic 40.0%
TCACCAATGCATGTTTGATG+CGG - chr1_4:63945206-63945225 Msa0177110:CDS 40.0%
AATCCGCATCAAACATGCAT+TGG + chr1_4:63945212-63945231 None:intergenic 40.0%
ATAAAGGAGTTCAAGGTCCA+GGG + chr1_4:63945287-63945306 None:intergenic 40.0%
AATAAAGGAGTTCAAGGTCC+AGG + chr1_4:63945288-63945307 None:intergenic 40.0%
ACATATATCCACACCAAACG+GGG + chr1_4:63945345-63945364 None:intergenic 40.0%
CACATATATCCACACCAAAC+GGG + chr1_4:63945346-63945365 None:intergenic 40.0%
GCACATATATCCACACCAAA+CGG + chr1_4:63945347-63945366 None:intergenic 40.0%
TTGTAGTCAAGCCTGCTTAT+CGG - chr1_4:63945685-63945704 Msa0177110:intron 40.0%
!! CTTTCTAGTTTCCGATAAGC+AGG + chr1_4:63945699-63945718 None:intergenic 40.0%
AGGTCATTCTCGTCAAAACA+TGG - chr1_4:63946241-63946260 Msa0177110:intron 40.0%
GGTCATTCTCGTCAAAACAT+GGG - chr1_4:63946242-63946261 Msa0177110:intron 40.0%
CTTGCTGCAGTCTTTCAAAT+TGG - chr1_4:63946528-63946547 Msa0177110:CDS 40.0%
CCAAAAAGTAATGGCAAACC+AGG + chr1_4:63946669-63946688 None:intergenic 40.0%
!! CCTGGTTTGCCATTACTTTT+TGG - chr1_4:63946666-63946685 Msa0177110:intron 40.0%
CAACAGAATCACCTTTCACT+CGG + chr1_4:63946774-63946793 None:intergenic 40.0%
GTGTTGTAACATGCATTGTG+AGG - chr1_4:63946797-63946816 Msa0177110:intron 40.0%
AAGGTGAAAAGACTTACACG+TGG + chr1_4:63946829-63946848 None:intergenic 40.0%
!! AACAACCACGAGGGTTTTAT+CGG - chr1_4:63946916-63946935 Msa0177110:intron 40.0%
CGATGAAGAAGTTGTGTTTG+CGG + chr1_4:63947340-63947359 None:intergenic 40.0%
GATGAGATGAGTAGATGAGA+TGG + chr1_4:63947378-63947397 None:intergenic 40.0%
!! GCTTTAGAGGCTTAAAGTGT+CGG - chr1_4:63947537-63947556 Msa0177110:intron 40.0%
GGACTAAAAGATGGTCTTTG+AGG + chr1_4:63947857-63947876 None:intergenic 40.0%
CAAGCAATATTACAGTCGCA+GGG + chr1_4:63947881-63947900 None:intergenic 40.0%
TCAAGCAATATTACAGTCGC+AGG + chr1_4:63947882-63947901 None:intergenic 40.0%
! CATCTAGGATTCCATGAGTT+TGG - chr1_4:63948011-63948030 Msa0177110:intron 40.0%
TGCAAAACAATGCTAAGGAG+TGG + chr1_4:63948272-63948291 None:intergenic 40.0%
TGACAAACTTGAAGCTGAGT+TGG - chr1_4:63948393-63948412 Msa0177110:CDS 40.0%
ATCAGTGCTTTGTCTTGTAC+AGG - chr1_4:63948504-63948523 Msa0177110:intron 40.0%
TCAGTGCTTTGTCTTGTACA+GGG - chr1_4:63948505-63948524 Msa0177110:intron 40.0%
AATCAGGGTGGAATTTCCAA+TGG - chr1_4:63948800-63948819 Msa0177110:intron 40.0%
!!! CCTGGCATTGGTTTTTGATA+TGG + chr1_4:63948935-63948954 None:intergenic 40.0%
CCATATCAAAAACCAATGCC+AGG - chr1_4:63948932-63948951 Msa0177110:CDS 40.0%
TGGTTAGTAGAGTGATAAGG+AGG + chr1_4:63949036-63949055 None:intergenic 40.0%
TGGTGGTTAGTAGAGTGATA+AGG + chr1_4:63949039-63949058 None:intergenic 40.0%
!! GGGATATAAGGTTGATTTGG+TGG + chr1_4:63949056-63949075 None:intergenic 40.0%
! GAGGGGATATAAGGTTGATT+TGG + chr1_4:63949059-63949078 None:intergenic 40.0%
ACCATCATCTGATCAGTGTA+CGG - chr1_4:63949270-63949289 Msa0177110:CDS 40.0%
!! TATTTTCGGGGTAGCAATTG+AGG - chr1_4:63949314-63949333 Msa0177110:intron 40.0%
ATCTTACTGCTTCCATTCCT+TGG - chr1_4:63949355-63949374 Msa0177110:intron 40.0%
!!! CCCCCATTTTTAGCTGATTT+AGG - chr1_4:63949397-63949416 Msa0177110:intron 40.0%
AGAAGCAATCTACAGTGACT+CGG - chr1_4:63949531-63949550 Msa0177110:intron 40.0%
GATAGGCAGCATTTCAGAAA+AGG + chr1_4:63949631-63949650 None:intergenic 40.0%
CGAGTTAACATTGTCCTGAA+AGG - chr1_4:63949732-63949751 Msa0177110:intron 40.0%
! GTGCCTTTCTGAGAATGAAA+TGG - chr1_4:63950128-63950147 Msa0177110:CDS 40.0%
CACCCATTTCATTCTCAGAA+AGG + chr1_4:63950134-63950153 None:intergenic 40.0%
! TCATTCTGGCTAGTGTTTAG+TGG - chr1_4:63950186-63950205 Msa0177110:five_prime_UTR 40.0%
TCCTTAAGAGATCCAGTTCT+TGG - chr1_4:63950243-63950262 Msa0177110:five_prime_UTR 40.0%
TCCAAGAACTGGATCTCTTA+AGG + chr1_4:63950247-63950266 None:intergenic 40.0%
! GTTGTTGGTGAGTCGAGAAT+GGG + chr1_4:63941555-63941574 None:intergenic 45.0%
! AGTTGTTGGTGAGTCGAGAA+TGG + chr1_4:63941556-63941575 None:intergenic 45.0%
CAAGGACCAATGACCAAACA+AGG - chr1_4:63941597-63941616 Msa0177110:three_prime_UTR 45.0%
AGTAACTGGGAAATGGTGGT+AGG - chr1_4:63941640-63941659 Msa0177110:three_prime_UTR 45.0%
! TGTTTGAGGTTCGGTAATGG+TGG + chr1_4:63941774-63941793 None:intergenic 45.0%
!! GAGAAAGAATTGGTTCGGGA+AGG + chr1_4:63941896-63941915 None:intergenic 45.0%
GGAGATTGGAATTGGGAGAA+AGG + chr1_4:63941925-63941944 None:intergenic 45.0%
AGGGATCGGAGATTGGAATT+GGG + chr1_4:63941932-63941951 None:intergenic 45.0%
!!! GTTTTTTGGGGAAACGAGGA+CGG + chr1_4:63941970-63941989 None:intergenic 45.0%
! GTTACTGCTACTTCTCATGC+TGG - chr1_4:63942614-63942633 Msa0177110:intron 45.0%
TATGGAGAATCTCATGGAGG+AGG - chr1_4:63942771-63942790 Msa0177110:intron 45.0%
! GGTGTTGGATGTGTCATTGA+TGG - chr1_4:63942792-63942811 Msa0177110:intron 45.0%
GCATATCAGCTTCAGAGAGA+GGG + chr1_4:63942833-63942852 None:intergenic 45.0%
TGCATATCAGCTTCAGAGAG+AGG + chr1_4:63942834-63942853 None:intergenic 45.0%
!! CTCTGAAGCTGATATGCAAG+AGG - chr1_4:63942836-63942855 Msa0177110:intron 45.0%
TGCAAGAGGATCTTGACAGA+AGG - chr1_4:63942850-63942869 Msa0177110:intron 45.0%
! GTTGTAATTCGGCTTTGACC+TGG + chr1_4:63943083-63943102 None:intergenic 45.0%
CCGAATTACAACTCCCAGAA+AGG - chr1_4:63943091-63943110 Msa0177110:intron 45.0%
ATACTCTCAGGAGTTTCGGA+AGG - chr1_4:63943131-63943150 Msa0177110:intron 45.0%
GTGCCCAATACTGATCAAAG+AGG - chr1_4:63943269-63943288 Msa0177110:intron 45.0%
AGCCACGTAAATCAAGGTCA+TGG + chr1_4:63943344-63943363 None:intergenic 45.0%
! GTATGGTGTCAGATCAGTTC+AGG - chr1_4:63943459-63943478 Msa0177110:intron 45.0%
TGGTGGTAGATCTTCTGCTA+GGG - chr1_4:63943569-63943588 Msa0177110:CDS 45.0%
TCTTCTGCTAGGGAAACCAT+TGG - chr1_4:63943579-63943598 Msa0177110:CDS 45.0%
TGCTAGGGAAACCATTGGAA+GGG - chr1_4:63943584-63943603 Msa0177110:CDS 45.0%
GATAGGAAATGGGAGCCTTT+CGG + chr1_4:63943854-63943873 None:intergenic 45.0%
GGATCCAGAAGTCCATCAAA+TGG + chr1_4:63944305-63944324 None:intergenic 45.0%
TATGAGATGGGGGAAAGAGA+CGG + chr1_4:63944326-63944345 None:intergenic 45.0%
GAAGAAGGTCTATGAGATGG+GGG + chr1_4:63944336-63944355 None:intergenic 45.0%
GAGTGAATTCACGAGTCACT+TGG - chr1_4:63944475-63944494 Msa0177110:intron 45.0%
ATGTCGTCAAATCTGCACCA+TGG - chr1_4:63944686-63944705 Msa0177110:intron 45.0%
! ATAGGTGTTGCAGTCAATGG+TGG + chr1_4:63944727-63944746 None:intergenic 45.0%
AATGGCGAATGGCAGAGTAT+GGG + chr1_4:63944815-63944834 None:intergenic 45.0%
!! ATAATGGATGACTGCAGAGG+AGG + chr1_4:63944954-63944973 None:intergenic 45.0%
! TGGAAGCTTGCTTACCAGTT+TGG - chr1_4:63945004-63945023 Msa0177110:intron 45.0%
!! ACCAGTTTGGTGTCACCAAA+AGG - chr1_4:63945017-63945036 Msa0177110:intron 45.0%
!! ACCTTTTGGTGACACCAAAC+TGG + chr1_4:63945021-63945040 None:intergenic 45.0%
GATCAGTATGGATAGGAGGA+TGG + chr1_4:63945109-63945128 None:intergenic 45.0%
GATCAAGTGTCAGTGTCTCA+TGG + chr1_4:63945498-63945517 None:intergenic 45.0%
TGAGACACTGACACTTGATC+AGG - chr1_4:63945498-63945517 Msa0177110:intron 45.0%
! GTCTGAACAGAAGAGCATGA+CGG + chr1_4:63946503-63946522 None:intergenic 45.0%
CAGGAATTCGACTTCAGAGA+TGG + chr1_4:63946650-63946669 None:intergenic 45.0%
!! CATCTCTGAAGTCGAATTCC+TGG - chr1_4:63946648-63946667 Msa0177110:intron 45.0%
TTCTCTGCATATTCAGGGTC+TGG + chr1_4:63946727-63946746 None:intergenic 45.0%
ATTGATGCTGTCCGAGTGAA+AGG - chr1_4:63946760-63946779 Msa0177110:intron 45.0%
CGAGTGAAAGGTGATTCTGT+TGG - chr1_4:63946772-63946791 Msa0177110:intron 45.0%
GTGAAAGGTGATTCTGTTGG+TGG - chr1_4:63946775-63946794 Msa0177110:intron 45.0%
!! ACAACCACGAGGGTTTTATC+GGG - chr1_4:63946917-63946936 Msa0177110:intron 45.0%
CGCAATTGCGGGTATAAAGT+GGG - chr1_4:63947172-63947191 Msa0177110:intron 45.0%
!! GGCTGTGTATTTGGTTCTGA+TGG + chr1_4:63947319-63947338 None:intergenic 45.0%
TGTGTTTGCGGCTGTGTATT+TGG + chr1_4:63947328-63947347 None:intergenic 45.0%
CTGTTGTCAAAGCGGAAATG+CGG + chr1_4:63947806-63947825 None:intergenic 45.0%
CATTTCCGCTTTGACAACAG+AGG - chr1_4:63947806-63947825 Msa0177110:intron 45.0%
TATGTCATTGCCCGCAACTA+AGG - chr1_4:63948426-63948445 Msa0177110:CDS 45.0%
ATGTCATTGCCCGCAACTAA+GGG - chr1_4:63948427-63948446 Msa0177110:CDS 45.0%
!! CAATTTGGTAGTGGGTTTGC+CGG - chr1_4:63948454-63948473 Msa0177110:intron 45.0%
GTGTTCACTCCCAGTCAAAA+AGG + chr1_4:63948608-63948627 None:intergenic 45.0%
GAGAGAGAGAGAGAGGATAT+TGG + chr1_4:63948881-63948900 None:intergenic 45.0%
! GTTGCGCTCAAGTTCTAACT+TGG - chr1_4:63948966-63948985 Msa0177110:intron 45.0%
TCAAGTGTGAAAACGGTGTG+GGG + chr1_4:63949125-63949144 None:intergenic 45.0%
CTCAAGTGTGAAAACGGTGT+GGG + chr1_4:63949126-63949145 None:intergenic 45.0%
CCTCACCTCAAGTGTGAAAA+CGG + chr1_4:63949132-63949151 None:intergenic 45.0%
! CGTTTTCACACTTGAGGTGA+GGG - chr1_4:63949130-63949149 Msa0177110:intron 45.0%
CCATCATCTGATCAGTGTAC+GGG - chr1_4:63949271-63949290 Msa0177110:CDS 45.0%
TGATCAGTGTACGGGATGTA+TGG - chr1_4:63949279-63949298 Msa0177110:CDS 45.0%
AACATCTGCATGCCAAGGAA+TGG + chr1_4:63949370-63949389 None:intergenic 45.0%
ATGTGAACATCTGCATGCCA+AGG + chr1_4:63949375-63949394 None:intergenic 45.0%
GAAGCAATCTACAGTGACTC+GGG - chr1_4:63949532-63949551 Msa0177110:intron 45.0%
ATGTAGCCGATCCAATCTAC+TGG - chr1_4:63949794-63949813 Msa0177110:intron 45.0%
TGTAGCCGATCCAATCTACT+GGG - chr1_4:63949795-63949814 Msa0177110:intron 45.0%
CACAAGTACCAAAGCTACCA+TGG + chr1_4:63950015-63950034 None:intergenic 45.0%
!! CATGGTAGCTTTGGTACTTG+TGG - chr1_4:63950013-63950032 Msa0177110:intron 45.0%
GGTACTTGTGGACCAATTGA+TGG - chr1_4:63950025-63950044 Msa0177110:intron 45.0%
GTGCATGTTGTGCCATCAAT+TGG + chr1_4:63950040-63950059 None:intergenic 45.0%
TTGGACTGCATGTCGTATTC+TGG - chr1_4:63950262-63950281 Msa0177110:five_prime_UTR 45.0%
!!! AATTGTTTTTATTATTTTTA+TGG - chr1_4:63942031-63942050 Msa0177110:intron 5.0%
!! TATATTATTATTACATTATT+TGG - chr1_4:63942284-63942303 Msa0177110:intron 5.0%
!!! TTATTTTTAATACTTTTTTA+TGG - chr1_4:63945635-63945654 Msa0177110:intron 5.0%
!! TTATTTGATATTTAAATAAT+AGG - chr1_4:63948134-63948153 Msa0177110:intron 5.0%
GTGAGTCGAGAATGGGAAGA+TGG + chr1_4:63941548-63941567 None:intergenic 50.0%
!! AATTGGTTCGGGAAGGAGTG+AGG + chr1_4:63941889-63941908 None:intergenic 50.0%
GAGGGATCGGAGATTGGAAT+TGG + chr1_4:63941933-63941952 None:intergenic 50.0%
TGCAGTTGAGCTAGGCCTTA+CGG + chr1_4:63942350-63942369 None:intergenic 50.0%
TTAGGCTGGACACTTTCACC+CGG - chr1_4:63942382-63942401 Msa0177110:intron 50.0%
TCTCATGCTGGTCGCATCTT+AGG - chr1_4:63942626-63942645 Msa0177110:intron 50.0%
TTTACAGAGATTCGGGCAGC+TGG - chr1_4:63942714-63942733 Msa0177110:intron 50.0%
TTACAGAGATTCGGGCAGCT+GGG - chr1_4:63942715-63942734 Msa0177110:intron 50.0%
! GAATCTCATGGAGGAGGTGT+TGG - chr1_4:63942777-63942796 Msa0177110:intron 50.0%
TATCAGCTTCAGAGAGAGGG+AGG + chr1_4:63942830-63942849 None:intergenic 50.0%
! AAGCCCTTTGGAGGCTATAG+AGG - chr1_4:63942920-63942939 Msa0177110:intron 50.0%
GTTCTTGTGTATAGGAGGCC+AGG - chr1_4:63943062-63943081 Msa0177110:intron 50.0%
AGCTTATAGGCCTTCCCATG+CGG - chr1_4:63943417-63943436 Msa0177110:intron 50.0%
GTCATAGGTTGCATCCGCAT+GGG + chr1_4:63943434-63943453 None:intergenic 50.0%
TGTCATAGGTTGCATCCGCA+TGG + chr1_4:63943435-63943454 None:intergenic 50.0%
GTGGTGGTAGATCTTCTGCT+AGG - chr1_4:63943568-63943587 Msa0177110:CDS 50.0%
CTGCTAGGGAAACCATTGGA+AGG - chr1_4:63943583-63943602 Msa0177110:CDS 50.0%
ACCATTGGAAGGGTTGCTTC+TGG - chr1_4:63943594-63943613 Msa0177110:CDS 50.0%
ACCAGAAGCAACCCTTCCAA+TGG + chr1_4:63943598-63943617 None:intergenic 50.0%
!! GCTCCCATTTGATGGACTTC+TGG - chr1_4:63944298-63944317 Msa0177110:intron 50.0%
GTGAAATGGCCTACTAGGTC+TGG - chr1_4:63944560-63944579 Msa0177110:intron 50.0%
TCGTCAAATCTGCACCATGG+TGG - chr1_4:63944689-63944708 Msa0177110:intron 50.0%
CGTCAAATCTGCACCATGGT+GGG - chr1_4:63944690-63944709 Msa0177110:intron 50.0%
GGCTAACACAAAACCCACCA+TGG + chr1_4:63944706-63944725 None:intergenic 50.0%
ATGGCGAATGGCAGAGTATG+GGG + chr1_4:63944814-63944833 None:intergenic 50.0%
CAATGGCGAATGGCAGAGTA+TGG + chr1_4:63944816-63944835 None:intergenic 50.0%
! AGAGGAGGCTTTGGCAAAAG+TGG + chr1_4:63944939-63944958 None:intergenic 50.0%
CAGGGTTCGAATCTTGGCAA+GGG + chr1_4:63945269-63945288 None:intergenic 50.0%
AAGGTCCAGGGTTCGAATCT+TGG + chr1_4:63945275-63945294 None:intergenic 50.0%
ATATCCACACCAAACGGGGA+GGG + chr1_4:63945341-63945360 None:intergenic 50.0%
TATATCCACACCAAACGGGG+AGG + chr1_4:63945342-63945361 None:intergenic 50.0%
CCTGTGCACTTGAGAGACAT+AGG + chr1_4:63945449-63945468 None:intergenic 50.0%
CCTATGTCTCTCAAGTGCAC+AGG - chr1_4:63945446-63945465 Msa0177110:intron 50.0%
GTTTCCCGATAAAACCCTCG+TGG + chr1_4:63946924-63946943 None:intergenic 50.0%
TTGTCAATAGTGGCCGATCG+CGG - chr1_4:63947078-63947097 Msa0177110:intron 50.0%
TTTGGAGAAAGCGGCTGAAG+CGG - chr1_4:63947148-63947167 Msa0177110:intron 50.0%
GCGCAATTGCGGGTATAAAG+TGG - chr1_4:63947171-63947190 Msa0177110:intron 50.0%
CCAAAAATTGATGTGGCGCG+GGG + chr1_4:63947768-63947787 None:intergenic 50.0%
CCCAAAAATTGATGTGGCGC+GGG + chr1_4:63947769-63947788 None:intergenic 50.0%
! CCCGCGCCACATCAATTTTT+GGG - chr1_4:63947766-63947785 Msa0177110:intron 50.0%
CCCCAAAAATTGATGTGGCG+CGG + chr1_4:63947770-63947789 None:intergenic 50.0%
! CCGCGCCACATCAATTTTTG+GGG - chr1_4:63947767-63947786 Msa0177110:intron 50.0%
!! CGCCACATCAATTTTTGGGG+TGG - chr1_4:63947770-63947789 Msa0177110:intron 50.0%
GGCCACCCCAAAAATTGATG+TGG + chr1_4:63947775-63947794 None:intergenic 50.0%
!! TCGCAGGGTGGACTAAAAGA+TGG + chr1_4:63947866-63947885 None:intergenic 50.0%
GCAATATTACAGTCGCAGGG+TGG + chr1_4:63947878-63947897 None:intergenic 50.0%
! CTCAGACTAGCTGTGCTCTT+TGG - chr1_4:63947987-63948006 Msa0177110:intron 50.0%
GCTGTGCTCTTTGGTCATCT+AGG - chr1_4:63947996-63948015 Msa0177110:intron 50.0%
AGGACAAGAACAAACCGCTC+TGG - chr1_4:63948664-63948683 Msa0177110:intron 50.0%
ACAAGAACAAACCGCTCTGG+TGG - chr1_4:63948667-63948686 Msa0177110:intron 50.0%
CAAGAACAAACCGCTCTGGT+GGG - chr1_4:63948668-63948687 Msa0177110:intron 50.0%
ATACCTGTATCCCACCAGAG+CGG + chr1_4:63948681-63948700 None:intergenic 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG + chr1_4:63948886-63948905 None:intergenic 50.0%
CTCATTTACTCCCCTGGCAT+TGG + chr1_4:63948947-63948966 None:intergenic 50.0%
CAAGTGTGAAAACGGTGTGG+GGG + chr1_4:63949124-63949143 None:intergenic 50.0%
CCTCAAGTGTGAAAACGGTG+TGG + chr1_4:63949127-63949146 None:intergenic 50.0%
! CCACACCGTTTTCACACTTG+AGG - chr1_4:63949124-63949143 Msa0177110:intron 50.0%
! CCGTTTTCACACTTGAGGTG+AGG - chr1_4:63949129-63949148 Msa0177110:intron 50.0%
CCCGTACACTGATCAGATGA+TGG + chr1_4:63949274-63949293 None:intergenic 50.0%
AGGCTGAGATACCAACCTCT+CGG + chr1_4:63949611-63949630 None:intergenic 50.0%
TGAACTTGCAGCTGTACCCA+TGG - chr1_4:63949983-63950002 Msa0177110:intron 50.0%
ACGACATGCAGTCCAAGAAC+TGG + chr1_4:63950258-63950277 None:intergenic 50.0%
CTTGCTGCTGGTGTCTGCTT+TGG + chr1_4:63941581-63941600 None:intergenic 55.0%
CAAAGCAGACACCAGCAGCA+AGG - chr1_4:63941579-63941598 Msa0177110:three_prime_UTR 55.0%
TGGTCATTGGTCCTTGCTGC+TGG + chr1_4:63941593-63941612 None:intergenic 55.0%
AAAGCCACGTGGGCAGTAAC+TGG - chr1_4:63941626-63941645 Msa0177110:three_prime_UTR 55.0%
AAGCCACGTGGGCAGTAACT+GGG - chr1_4:63941627-63941646 Msa0177110:three_prime_UTR 55.0%
TTTCCCAGTTACTGCCCACG+TGG + chr1_4:63941633-63941652 None:intergenic 55.0%
CGTGGGCAGTAACTGGGAAA+TGG - chr1_4:63941633-63941652 Msa0177110:three_prime_UTR 55.0%
GGGCAGTAACTGGGAAATGG+TGG - chr1_4:63941636-63941655 Msa0177110:three_prime_UTR 55.0%
GGTGGAGATCGAAGAAGCCA+TGG + chr1_4:63941858-63941877 None:intergenic 55.0%
AGGAGTGAGGAAGGGTTTGG+TGG + chr1_4:63941876-63941895 None:intergenic 55.0%
GGAAGGAGTGAGGAAGGGTT+TGG + chr1_4:63941879-63941898 None:intergenic 55.0%
GTTCGGGAAGGAGTGAGGAA+GGG + chr1_4:63941884-63941903 None:intergenic 55.0%
GAAACGAGGACGGAGGTAGA+CGG + chr1_4:63941960-63941979 None:intergenic 55.0%
!! TTTTGGGGAAACGAGGACGG+AGG + chr1_4:63941967-63941986 None:intergenic 55.0%
TAGGCTGGACACTTTCACCC+GGG - chr1_4:63942383-63942402 Msa0177110:intron 55.0%
! GGGCAGCTGGGAGTACATAT+GGG - chr1_4:63942727-63942746 Msa0177110:intron 55.0%
TAGGTTGCATCCGCATGGGA+AGG + chr1_4:63943430-63943449 None:intergenic 55.0%
GAAATGGGAGCCTTTCGGCA+GGG + chr1_4:63943849-63943868 None:intergenic 55.0%
CTGGGTCAAGCGCAACTCTA+AGG + chr1_4:63944641-63944660 None:intergenic 55.0%
!! GAACATGGTGTTGCGGCCTA+TGG + chr1_4:63944769-63944788 None:intergenic 55.0%
GATGACTGCAGAGGAGGCTT+TGG + chr1_4:63944948-63944967 None:intergenic 55.0%
CCAGGGTTCGAATCTTGGCA+AGG + chr1_4:63945270-63945289 None:intergenic 55.0%
CCTTGCCAAGATTCGAACCC+TGG - chr1_4:63945267-63945286 Msa0177110:CDS 55.0%
TATCCACACCAAACGGGGAG+GGG + chr1_4:63945340-63945359 None:intergenic 55.0%
TTTCTCCAAACGCTCCGCGT+TGG + chr1_4:63947138-63947157 None:intergenic 55.0%
TTGGAGAAAGCGGCTGAAGC+GGG - chr1_4:63947149-63947168 Msa0177110:intron 55.0%
GGTATAAAGTGGGCGCGATG+CGG - chr1_4:63947182-63947201 Msa0177110:intron 55.0%
GTATAAAGTGGGCGCGATGC+GGG - chr1_4:63947183-63947202 Msa0177110:intron 55.0%
AGCGGGCACTATTTCGGTGA+CGG + chr1_4:63947734-63947753 None:intergenic 55.0%
! CCCCGCGCCACATCAATTTT+TGG - chr1_4:63947765-63947784 Msa0177110:intron 55.0%
AAACCGCTCTGGTGGGATAC+AGG - chr1_4:63948675-63948694 Msa0177110:intron 55.0%
GCGCAACTCATTTACTCCCC+TGG + chr1_4:63948953-63948972 None:intergenic 55.0%
GAAACAGAGCTCATAGCCCG+TGG - chr1_4:63949563-63949582 Msa0177110:intron 55.0%
ACAGGGATCATGACGACCAC+GGG + chr1_4:63949582-63949601 None:intergenic 55.0%
CACAGGGATCATGACGACCA+CGG + chr1_4:63949583-63949602 None:intergenic 55.0%
CAACCTCTCGGGACAACACA+GGG + chr1_4:63949599-63949618 None:intergenic 55.0%
GGCTGAGATACCAACCTCTC+GGG + chr1_4:63949610-63949629 None:intergenic 55.0%
TGCAGCTGTACCCATGGTAG+AGG - chr1_4:63949989-63950008 Msa0177110:intron 55.0%
TGTACCCATGGTAGAGGCCA+TGG - chr1_4:63949995-63950014 Msa0177110:intron 55.0%
GCTACCATGGCCTCTACCAT+GGG + chr1_4:63950002-63950021 None:intergenic 55.0%
AGCTACCATGGCCTCTACCA+TGG + chr1_4:63950003-63950022 None:intergenic 55.0%
GGTAGAGGCCATGGTAGCTT+TGG - chr1_4:63950004-63950023 Msa0177110:intron 55.0%
GGTTCGGGAAGGAGTGAGGA+AGG + chr1_4:63941885-63941904 None:intergenic 60.0%
GGAGGAGAGGGATCGGAGAT+TGG + chr1_4:63941939-63941958 None:intergenic 60.0%
GGTAGACGGAGGAGAGGGAT+CGG + chr1_4:63941946-63941965 None:intergenic 60.0%
ACGGAGGTAGACGGAGGAGA+GGG + chr1_4:63941951-63941970 None:intergenic 60.0%
! CGGGCAGCTGGGAGTACATA+TGG - chr1_4:63942726-63942745 Msa0177110:intron 60.0%
TCTGCAACCTCCCTGCCGAA+AGG - chr1_4:63943836-63943855 Msa0177110:intron 60.0%
GGAAATGGGAGCCTTTCGGC+AGG + chr1_4:63943850-63943869 None:intergenic 60.0%
GAGGGGATGGGTAGCTCACT+TGG + chr1_4:63945323-63945342 None:intergenic 60.0%
ACACCAAACGGGGAGGGGAT+GGG + chr1_4:63945335-63945354 None:intergenic 60.0%
!!! ATTTTTGGCCGCGCCGCGAT+CGG + chr1_4:63947094-63947113 None:intergenic 60.0%
! CGCGGAGCGTTTGGAGAAAG+CGG - chr1_4:63947139-63947158 Msa0177110:intron 60.0%
CGGGCACTATTTCGGTGACG+GGG + chr1_4:63947732-63947751 None:intergenic 60.0%
GCGGGCACTATTTCGGTGAC+GGG + chr1_4:63947733-63947752 None:intergenic 60.0%
!! GCGCGTAGCGGGCACTATTT+CGG + chr1_4:63947740-63947759 None:intergenic 60.0%
AATTGATGTGGCGCGGGGTG+CGG + chr1_4:63947763-63947782 None:intergenic 60.0%
TGTGAAAACGGTGTGGGGGC+GGG + chr1_4:63949120-63949139 None:intergenic 60.0%
GTGTGAAAACGGTGTGGGGG+CGG + chr1_4:63949121-63949140 None:intergenic 60.0%
GATCCCTGTGTTGTCCCGAG+AGG - chr1_4:63949593-63949612 Msa0177110:intron 60.0%
CCAACCTCTCGGGACAACAC+AGG + chr1_4:63949600-63949619 None:intergenic 60.0%
CCTGTGTTGTCCCGAGAGGT+TGG - chr1_4:63949597-63949616 Msa0177110:intron 60.0%
GACGGAGGTAGACGGAGGAG+AGG + chr1_4:63941952-63941971 None:intergenic 65.0%
ACGAGGACGGAGGTAGACGG+AGG + chr1_4:63941957-63941976 None:intergenic 65.0%
GGCGGTGTCTGCTGTCCGTA+AGG - chr1_4:63942332-63942351 Msa0177110:intron 65.0%
GAGCAGAACTGCGAGGTCCC+GGG + chr1_4:63942403-63942422 None:intergenic 65.0%
CGAGCAGAACTGCGAGGTCC+CGG + chr1_4:63942404-63942423 None:intergenic 65.0%
ACCTCGCAGTTCTGCTCGCG+AGG - chr1_4:63942406-63942425 Msa0177110:intron 65.0%
TCAGAGAGAGGGAGGCGAGG+AGG + chr1_4:63942822-63942841 None:intergenic 65.0%
GCTTCAGAGAGAGGGAGGCG+AGG + chr1_4:63942825-63942844 None:intergenic 65.0%
ATGGGAGCCTTTCGGCAGGG+AGG + chr1_4:63943846-63943865 None:intergenic 65.0%
CTACCCATCCCCTCCCCGTT+TGG - chr1_4:63945329-63945348 Msa0177110:intron 65.0%
CACACCAAACGGGGAGGGGA+TGG + chr1_4:63945336-63945355 None:intergenic 65.0%
! CATCCCCTCCCCGTTTGGTG+TGG - chr1_4:63945334-63945353 Msa0177110:intron 65.0%
AATAGTGGCCGATCGCGGCG+CGG - chr1_4:63947083-63947102 Msa0177110:intron 65.0%
GATCGCGGCGCGGCCAAAAA+TGG - chr1_4:63947093-63947112 Msa0177110:intron 65.0%
TGCAACGCAGCGCTCCAACG+CGG - chr1_4:63947121-63947140 Msa0177110:intron 65.0%
GGCTGAAGCGGGCGCAATTG+CGG - chr1_4:63947160-63947179 Msa0177110:intron 65.0%
GCTGAAGCGGGCGCAATTGC+GGG - chr1_4:63947161-63947180 Msa0177110:intron 65.0%
ATTGATGTGGCGCGGGGTGC+GGG + chr1_4:63947762-63947781 None:intergenic 65.0%
AGCGGAAATGCGGCGCAACG+CGG + chr1_4:63947796-63947815 None:intergenic 65.0%
GCCTCGCGAGCAGAACTGCG+AGG + chr1_4:63942410-63942429 None:intergenic 70.0%
! GCGCTCCAACGCGGAGCGTT+TGG - chr1_4:63947130-63947149 Msa0177110:intron 70.0%
GGGCGCGATGCGGGTCAAAG+CGG - chr1_4:63947192-63947211 Msa0177110:intron 70.0%
GGCGCGATGCGGGTCAAAGC+GGG - chr1_4:63947193-63947212 Msa0177110:intron 70.0%
! GCGGGGTGCGGGCGCGTAGC+GGG + chr1_4:63947751-63947770 None:intergenic 85.0%
! CGCGGGGTGCGGGCGCGTAG+CGG + chr1_4:63947752-63947771 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 63941482 63950547 63941482 ID=Msa0177110;Name=Msa0177110
chr1_4 mRNA 63941482 63950547 63941482 ID=Msa0177110-mRNA-1;Parent=Msa0177110;Name=Msa0177110-mRNA-1;_AED=0.10;_eAED=0.10;_QI=375|1|1|1|1|1|13|408|436
chr1_4 exon 63941482 63942035 63941482 ID=Msa0177110-mRNA-1:exon:20759;Parent=Msa0177110-mRNA-1
chr1_4 exon 63942415 63942499 63942415 ID=Msa0177110-mRNA-1:exon:20758;Parent=Msa0177110-mRNA-1
chr1_4 exon 63943158 63943223 63943158 ID=Msa0177110-mRNA-1:exon:20757;Parent=Msa0177110-mRNA-1
chr1_4 exon 63943333 63943427 63943333 ID=Msa0177110-mRNA-1:exon:20756;Parent=Msa0177110-mRNA-1
chr1_4 exon 63943554 63943656 63943554 ID=Msa0177110-mRNA-1:exon:20755;Parent=Msa0177110-mRNA-1
chr1_4 exon 63945198 63945329 63945198 ID=Msa0177110-mRNA-1:exon:20754;Parent=Msa0177110-mRNA-1
chr1_4 exon 63946510 63946590 63946510 ID=Msa0177110-mRNA-1:exon:20753;Parent=Msa0177110-mRNA-1
chr1_4 exon 63948370 63948462 63948370 ID=Msa0177110-mRNA-1:exon:20752;Parent=Msa0177110-mRNA-1
chr1_4 exon 63948549 63948632 63948549 ID=Msa0177110-mRNA-1:exon:20751;Parent=Msa0177110-mRNA-1
chr1_4 exon 63948734 63948792 63948734 ID=Msa0177110-mRNA-1:exon:20750;Parent=Msa0177110-mRNA-1
chr1_4 exon 63948877 63948953 63948877 ID=Msa0177110-mRNA-1:exon:20749;Parent=Msa0177110-mRNA-1
chr1_4 exon 63949158 63949308 63949158 ID=Msa0177110-mRNA-1:exon:20748;Parent=Msa0177110-mRNA-1
chr1_4 exon 63950034 63950547 63950034 ID=Msa0177110-mRNA-1:exon:20747;Parent=Msa0177110-mRNA-1
chr1_4 five_prime_UTR 63950173 63950547 63950173 ID=Msa0177110-mRNA-1:five_prime_utr;Parent=Msa0177110-mRNA-1
chr1_4 CDS 63950034 63950172 63950034 ID=Msa0177110-mRNA-1:cds;Parent=Msa0177110-mRNA-1
chr1_4 CDS 63949158 63949308 63949158 ID=Msa0177110-mRNA-1:cds;Parent=Msa0177110-mRNA-1
chr1_4 CDS 63948877 63948953 63948877 ID=Msa0177110-mRNA-1:cds;Parent=Msa0177110-mRNA-1
chr1_4 CDS 63948734 63948792 63948734 ID=Msa0177110-mRNA-1:cds;Parent=Msa0177110-mRNA-1
chr1_4 CDS 63948549 63948632 63948549 ID=Msa0177110-mRNA-1:cds;Parent=Msa0177110-mRNA-1
chr1_4 CDS 63948370 63948462 63948370 ID=Msa0177110-mRNA-1:cds;Parent=Msa0177110-mRNA-1
chr1_4 CDS 63946510 63946590 63946510 ID=Msa0177110-mRNA-1:cds;Parent=Msa0177110-mRNA-1
chr1_4 CDS 63945198 63945329 63945198 ID=Msa0177110-mRNA-1:cds;Parent=Msa0177110-mRNA-1
chr1_4 CDS 63943554 63943656 63943554 ID=Msa0177110-mRNA-1:cds;Parent=Msa0177110-mRNA-1
chr1_4 CDS 63943333 63943427 63943333 ID=Msa0177110-mRNA-1:cds;Parent=Msa0177110-mRNA-1
chr1_4 CDS 63943158 63943223 63943158 ID=Msa0177110-mRNA-1:cds;Parent=Msa0177110-mRNA-1
chr1_4 CDS 63942415 63942499 63942415 ID=Msa0177110-mRNA-1:cds;Parent=Msa0177110-mRNA-1
chr1_4 CDS 63941890 63942035 63941890 ID=Msa0177110-mRNA-1:cds;Parent=Msa0177110-mRNA-1
chr1_4 three_prime_UTR 63941482 63941889 63941482 ID=Msa0177110-mRNA-1:three_prime_utr;Parent=Msa0177110-mRNA-1
Gene Sequence

>Msa0177110

ATGGCTTCTTCGATCTCCACCAAACCCTTCCTCACTCCTTCCCGAACCAATTCTTTCTCTTCCTTCCTTTCTCCCAATTCCAATCTCCGATCCCTCTCCTCCGTCTACCTCCGTCCTCGTTTCCCCAAAAAACAACTCCAGATTCGGGCAGCTGGGAGTACATATGGGAACCACTTTCGGGTTACAACATATGGAGAATCTCATGGAGGAGGTGTTGGATGTGTCATTGATGGATGTCCTCCTCGCCTCCCTCTCTCTGAAGCTGATATGCAAGAGGATCTTGACAGAAGGAGGCCAGGTCAAAGCCGAATTACAACTCCCAGAAAGGAGACTGATACATGTAAAATACTCTCAGGAGTTTCGGAAGGAGTTACTACAGGAACTCCAATCCATGTATTTGTGCCCAATACTGATCAAAGAGGAAATGATTATAGCGAGATGTCATTAGCTTATAGGCCTTCCCATGCGGATGCAACCTATGACATGAAGTATGGTGTCAGATCAGTTCAGGGTGGTGGTAGATCTTCTGCTAGGGAAACCATTGGAAGGGTTGCTTCTGGTGCTGTTGCTAAGAAAATCCTTAAAAAATTTGCAGGAACTGAGATTCTTGCCTATGTCTCTCAAGTGCACAGGATTATTCTTCCCGAAGACTTAATTGACCATGAGACACTGACACTTGATCAGATTGAGAGTAATATTGTTCGATGTCCAGACCCTGAATATGCAGAGAAGATGATATCTGCTATTGATGCTGTCCGAGTGAAAGGTGATTCTGTTGGTGGTGTTGTAACATGCATTGTGAGGAACTGTCCACGTGGTCTTGGTTCACCAGTATTTGACAAACTTGAAGCTGAGTTGGCTAAAGCTGCTATGTCATTGCCCGCAACTAAGGGTTTTCAATTTGGTAGTGGGTTTGCCGGTACCTTTTTGACTGGGAGTGAACACAATGATGAATTTTATATAGATCAAAATGGAAAGGTGAGGACAAGAACAAACCGCTCTGGTGGGATACAGGGTGGAATTTCCAATGGAGAAATAATTAACATGAGAATAGGTTTCAAGCCGACATCGACTATTACAAAGAAGCAATCTACAGTGACTCGGGATAAGAAAGAAACAGAGCTCATAGCCCGTGGTCGTCATGATCCCTGTGTTGTCCCGAGAGCTGTACCCATGGTAGAGGCCATGGTAGCTTTGGTACTTGTGGACCAATTGATGGCACAACATGCACAGTGTAATCTATTTCCCGCGAACTTTGATTTACAAGAATCCTTGTCAGCCAAATTAGAAACAGAAGAAGTGCCTTTCTGA

Protein sequence

>Msa0177110

MASSISTKPFLTPSRTNSFSSFLSPNSNLRSLSSVYLRPRFPKKQLQIRAAGSTYGNHFRVTTYGESHGGGVGCVIDGCPPRLPLSEADMQEDLDRRRPGQSRITTPRKETDTCKILSGVSEGVTTGTPIHVFVPNTDQRGNDYSEMSLAYRPSHADATYDMKYGVRSVQGGGRSSARETIGRVASGAVAKKILKKFAGTEILAYVSQVHRIILPEDLIDHETLTLDQIESNIVRCPDPEYAEKMISAIDAVRVKGDSVGGVVTCIVRNCPRGLGSPVFDKLEAELAKAAMSLPATKGFQFGSGFAGTFLTGSEHNDEFYIDQNGKVRTRTNRSGGIQGGISNGEIINMRIGFKPTSTITKKQSTVTRDKKETELIARGRHDPCVVPRAVPMVEAMVALVLVDQLMAQHAQCNLFPANFDLQESLSAKLETEEVPF*