Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0131190 | XP_003591924.2 | 97.936 | 436 | 9 | 0 | 1 | 436 | 1 | 436 | 0.0 | 885 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0131190 | sp|P57720|AROC_ARATH | 79.439 | 428 | 79 | 3 | 2 | 425 | 3 | 425 | 0.0 | 704 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0131190 | G7I3B2 | 97.936 | 436 | 9 | 0 | 1 | 436 | 1 | 436 | 0.0 | 885 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0037000 | Msa0131190 | 0.845525 | 3.847275e-59 | -8.615850e-47 |
| Msa0069320 | Msa0131190 | 0.861970 | 7.054014e-64 | -8.615850e-47 |
| Msa0131190 | Msa0177110 | 0.852490 | 4.462863e-61 | -8.615850e-47 |
| Msa0131190 | Msa0280470 | 0.812557 | 3.993992e-51 | -8.615850e-47 |
| Msa0131190 | Msa0307120 | 0.847691 | 9.852481e-60 | -8.615850e-47 |
| Msa0131190 | Msa0607120 | 0.806463 | 8.125991e-50 | -8.615850e-47 |
| Msa0131190 | Msa0690190 | 0.809799 | 1.582917e-50 | -8.615850e-47 |
| Msa0131190 | Msa0758400 | 0.804345 | 2.258873e-49 | -8.615850e-47 |
| Msa0131190 | Msa1168530 | 0.810955 | 8.909974e-51 | -8.615850e-47 |
| Msa0131190 | Msa1458620 | 0.927189 | 1.662683e-91 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0131190 | MtrunA17_Chr1g0199821 | 97.936 | 436 | 9 | 0 | 1 | 436 | 1 | 436 | 0.0 | 885 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0131190 | AT1G48850.1 | 79.439 | 428 | 79 | 3 | 2 | 425 | 3 | 425 | 0.0 | 704 |
| Msa0131190 | AT1G48850.3 | 78.729 | 362 | 68 | 3 | 2 | 359 | 3 | 359 | 0.0 | 590 |
| Msa0131190 | AT1G48850.2 | 78.729 | 362 | 68 | 3 | 2 | 359 | 3 | 359 | 0.0 | 590 |
Find 168 sgRNAs with CRISPR-Local
Find 645 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACATGTATCAGTCTCCTTTC+TGG | 0.119746 | 1_3:+61907488 | None:intergenic |
| TAACTTCCTTGTTCGCTTCT+TGG | 0.130786 | 1_3:+61909069 | None:intergenic |
| CACTTCTTCTGTTTCTAATT+TGG | 0.135458 | 1_3:+61900524 | None:intergenic |
| ATCATCTTCTCTGCATATTC+AGG | 0.226636 | 1_3:+61903939 | None:intergenic |
| GCGAGATGTCATTAGCTTAT+AGG | 0.246076 | 1_3:-61907189 | Msa0131190:CDS |
| TTGGACTGCATGTCGTATTC+TGG | 0.254762 | 1_3:-61900370 | Msa0131190:three_prime_UTR |
| GAGGGATCGGAGATTGGAAT+TGG | 0.269061 | 1_3:+61908664 | None:intergenic |
| AAAGCCACGTGGGCAGTAAC+TGG | 0.271931 | 1_3:-61908958 | Msa0131190:five_prime_UTR |
| TACATATGGGAACCACTTTC+GGG | 0.279701 | 1_3:-61907853 | Msa0131190:CDS |
| TTTGGTCATTGGTCCTTTGC+TGG | 0.289999 | 1_3:+61908991 | None:intergenic |
| CAATTTGGTAGTGGGTTTGC+AGG | 0.291322 | 1_3:-61902198 | Msa0131190:intron |
| CACTTTCGGGTTACAACATA+TGG | 0.302913 | 1_3:-61907840 | Msa0131190:CDS |
| ATGGCTATTGCTATTGCTAT+TGG | 0.307089 | 1_3:+61908758 | None:intergenic |
| TCCGTAAGAGATCCAGTTCT+TGG | 0.307110 | 1_3:-61900389 | Msa0131190:three_prime_UTR |
| CATGTATCAGTCTCCTTTCT+GGG | 0.318592 | 1_3:+61907489 | None:intergenic |
| TTCATTATTTCTCAGGGTCT+TGG | 0.321630 | 1_3:-61902294 | Msa0131190:intron |
| TCGCAAAAGTTGAATTGAAT+TGG | 0.335467 | 1_3:+61908861 | None:intergenic |
| GTACATATGGGAACCACTTT+CGG | 0.342196 | 1_3:-61907854 | Msa0131190:CDS |
| TTTCCTCTTTGATCAGTATT+GGG | 0.342486 | 1_3:+61907321 | None:intergenic |
| GCTTCAAGTTTGTCAAATAC+TGG | 0.357310 | 1_3:+61902267 | None:intergenic |
| ATTTCCTCTTTGATCAGTAT+TGG | 0.358775 | 1_3:+61907320 | None:intergenic |
| TCCTTTGCTGGTGTCTGCTT+TGG | 0.362739 | 1_3:+61909003 | None:intergenic |
| TGGCTATTGCTATTGCTATT+GGG | 0.364841 | 1_3:+61908759 | None:intergenic |
| CTCAGATAAAATCTTCATTC+TGG | 0.368408 | 1_3:-61900460 | Msa0131190:three_prime_UTR |
| CCTTTCTGGGAGTTGTAATT+CGG | 0.369236 | 1_3:+61907502 | None:intergenic |
| CGGGCAGCTGGGAGTACATA+TGG | 0.371354 | 1_3:-61907867 | Msa0131190:CDS |
| GTGTTCACTCCCAGTCAAAA+AGG | 0.378540 | 1_3:+61902048 | None:intergenic |
| TCATTCTGGCTAGTGTTTAG+TGG | 0.379236 | 1_3:-61900446 | Msa0131190:three_prime_UTR |
| TGTTTCAATAAATGAAGCTT+TGG | 0.379583 | 1_3:-61900117 | Msa0131190:three_prime_UTR |
| ACCATTGGAAGGGTTGCTTC+TGG | 0.385048 | 1_3:-61906999 | Msa0131190:CDS |
| GAAATAATTAACATGAGAAT+AGG | 0.385678 | 1_3:-61901830 | Msa0131190:CDS |
| CATGTTAATTATTTCTCCAT+TGG | 0.386598 | 1_3:+61901838 | None:intergenic |
| AATGAAATACTCTTTGTTTG+AGG | 0.389567 | 1_3:+61908809 | None:intergenic |
| AATTGAAAACCCTTAGTTGC+GGG | 0.393669 | 1_3:+61902216 | None:intergenic |
| TTCTCTGCATATTCAGGGTC+TGG | 0.396812 | 1_3:+61903945 | None:intergenic |
| TTTACAGAGATTCGGGCAGC+TGG | 0.397683 | 1_3:-61907879 | Msa0131190:intron |
| CTCATGGTCAATTAAGTCTT+CGG | 0.397981 | 1_3:+61905174 | None:intergenic |
| TAAAATACTCTCAGGAGTTT+CGG | 0.400065 | 1_3:-61907466 | Msa0131190:CDS |
| TGTCTGCTTTGGTAAGTTGT+TGG | 0.406083 | 1_3:+61909014 | None:intergenic |
| TGGGTGCATATATCAGTAAT+TGG | 0.408539 | 1_3:-61900484 | Msa0131190:three_prime_UTR |
| TATGTCATTGCCCGCAACTA+AGG | 0.414702 | 1_3:-61902226 | Msa0131190:CDS |
| GTGCCTTTCTGAAAATGAAA+TGG | 0.415398 | 1_3:-61900504 | Msa0131190:exon |
| GGAGGAGAGGGATCGGAGAT+TGG | 0.418731 | 1_3:+61908658 | None:intergenic |
| GGTACTTGTGGACCAATTGA+TGG | 0.418936 | 1_3:-61900607 | Msa0131190:CDS |
| GGAAGGAGTGAGGAAGGGTT+TGG | 0.419419 | 1_3:+61908718 | None:intergenic |
| AGGGATCGGAGATTGGAATT+GGG | 0.422790 | 1_3:+61908665 | None:intergenic |
| TCATGGTCAATTAAGTCTTC+GGG | 0.427778 | 1_3:+61905175 | None:intergenic |
| CTTTGTTTGAGGTTCGGTAA+TGG | 0.430366 | 1_3:+61908820 | None:intergenic |
| GTATGGTGTCAGATCAGTTC+AGG | 0.431140 | 1_3:-61907134 | Msa0131190:intron |
| AATACTCTTTGTTTGAGGTT+CGG | 0.434743 | 1_3:+61908814 | None:intergenic |
| AAACCGCTCTGGTGGGATAC+AGG | 0.446252 | 1_3:-61901978 | Msa0131190:intron |
| AGTTGTTGGTGAGTCGAGAA+TGG | 0.450017 | 1_3:+61909028 | None:intergenic |
| GGTAGAGGCCATGGTAGCTT+TGG | 0.452564 | 1_3:-61900628 | Msa0131190:CDS |
| ATACATATATATATGTTTGC+GGG | 0.452751 | 1_3:-61900344 | Msa0131190:three_prime_UTR |
| TGACAAACTTGAAGCTGAGT+TGG | 0.456051 | 1_3:-61902259 | Msa0131190:CDS |
| AGGAAGAGAAAGAATCGGTT+CGG | 0.456406 | 1_3:+61908696 | None:intergenic |
| ACGACATGCAGTCCAAGAAC+TGG | 0.457953 | 1_3:+61900377 | None:intergenic |
| GCAACCTATGACATGAAGTA+TGG | 0.467320 | 1_3:-61907151 | Msa0131190:CDS |
| GTGCATGTTGTGCCATCAAT+TGG | 0.469901 | 1_3:+61900595 | None:intergenic |
| GTTGTAATTCGGCTTTGACC+TGG | 0.476712 | 1_3:+61907513 | None:intergenic |
| CAGTATTGGGCACAAATACA+TGG | 0.482313 | 1_3:+61907334 | None:intergenic |
| TTGGGCACAAATACATGGAT+TGG | 0.483473 | 1_3:+61907339 | None:intergenic |
| GGTAGACGGAGGAGAGGGAT+CGG | 0.486339 | 1_3:+61908651 | None:intergenic |
| CGTGGGCAGTAACTGGGAAA+TGG | 0.488897 | 1_3:-61908951 | Msa0131190:five_prime_UTR |
| TGTTTCTAATTTGGCTGACA+AGG | 0.491775 | 1_3:+61900533 | None:intergenic |
| GGAAGAGAAAGAATCGGTTC+GGG | 0.494003 | 1_3:+61908697 | None:intergenic |
| GGTGTTGGATGTGTCATTGA+TGG | 0.495772 | 1_3:-61907801 | Msa0131190:CDS |
| TCCAAGAACTGGATCTCTTA+CGG | 0.497558 | 1_3:+61900388 | None:intergenic |
| CCGAATTACAACTCCCAGAA+AGG | 0.500551 | 1_3:-61907502 | Msa0131190:CDS |
| ATTGGAATTGGGAGAAAGGA+AGG | 0.503710 | 1_3:+61908676 | None:intergenic |
| AGGAGTGAGGAAGGGTTTGG+TGG | 0.507069 | 1_3:+61908721 | None:intergenic |
| GTGAGTCGAGAATGGGAAGA+TGG | 0.507831 | 1_3:+61909036 | None:intergenic |
| GTTGTTGGTGAGTCGAGAAT+GGG | 0.508037 | 1_3:+61909029 | None:intergenic |
| GAATCTCATGGAGGAGGTGT+TGG | 0.513832 | 1_3:-61907816 | Msa0131190:CDS |
| TGAGACACTGACACTTGATC+AGG | 0.515093 | 1_3:-61905155 | Msa0131190:intron |
| AACTCCTATATTTAGGGTGG+TGG | 0.515942 | 1_3:-61907041 | Msa0131190:intron |
| GGAGATTGGAATTGGGAGAA+AGG | 0.519246 | 1_3:+61908672 | None:intergenic |
| GGGCAGCTGGGAGTACATAT+GGG | 0.522096 | 1_3:-61907866 | Msa0131190:CDS |
| CATGGTAGCTTTGGTACTTG+TGG | 0.522487 | 1_3:-61900619 | Msa0131190:CDS |
| TCATCTTCTCTGCATATTCA+GGG | 0.523950 | 1_3:+61903940 | None:intergenic |
| GGCTGAGATACCAACCTCTC+GGG | 0.524544 | 1_3:+61901024 | None:intergenic |
| ACGGAGGTAGACGGAGGAGA+GGG | 0.527565 | 1_3:+61908646 | None:intergenic |
| TTCTTGTAAATCAAAGTTCG+CGG | 0.527748 | 1_3:+61900557 | None:intergenic |
| AAGGAAGGAAGAGAAAGAAT+CGG | 0.529630 | 1_3:+61908691 | None:intergenic |
| TGCCTTTCTGAAAATGAAAT+GGG | 0.530857 | 1_3:-61900503 | Msa0131190:exon |
| ATTGAATTGGTTGGTGGCAA+TGG | 0.530997 | 1_3:+61908874 | None:intergenic |
| GACGGAGGTAGACGGAGGAG+AGG | 0.531416 | 1_3:+61908645 | None:intergenic |
| TTAATTGCAGGAGTTACTAC+AGG | 0.532875 | 1_3:-61907366 | Msa0131190:intron |
| GATACATGTAAAATACTCTC+AGG | 0.533691 | 1_3:-61907474 | Msa0131190:CDS |
| GATACATATATATATGTTTG+CGG | 0.533727 | 1_3:-61900345 | Msa0131190:three_prime_UTR |
| GTTCTTGTGTATAGGAGGCC+AGG | 0.534576 | 1_3:-61907531 | Msa0131190:intron |
| AATCAGGGTGGAATTTCCAA+TGG | 0.534772 | 1_3:-61901854 | Msa0131190:intron |
| TGTCATAGGTTGCATCCGCA+TGG | 0.536508 | 1_3:+61907161 | None:intergenic |
| GACACCATACTTCATGTCAT+AGG | 0.537696 | 1_3:+61907147 | None:intergenic |
| TCTTGTAAATCAAAGTTCGC+GGG | 0.540183 | 1_3:+61900558 | None:intergenic |
| ATGTCATTGCCCGCAACTAA+GGG | 0.549586 | 1_3:-61902225 | Msa0131190:CDS |
| TCTTCTGCTAGGGAAACCAT+TGG | 0.551202 | 1_3:-61907014 | Msa0131190:CDS |
| GGTTCGGGAAGGAGTGAGGA+AGG | 0.551542 | 1_3:+61908712 | None:intergenic |
| AAAAGTTGAATTGAATTGGT+TGG | 0.558126 | 1_3:+61908865 | None:intergenic |
| AAGCCACGTGGGCAGTAACT+GGG | 0.560152 | 1_3:-61908957 | Msa0131190:five_prime_UTR |
| AGTTGAATTGAATTGGTTGG+TGG | 0.561720 | 1_3:+61908868 | None:intergenic |
| GTGGTGGTAGATCTTCTGCT+AGG | 0.562776 | 1_3:-61907025 | Msa0131190:CDS |
| GAAACGAGGACGGAGGTAGA+CGG | 0.563398 | 1_3:+61908637 | None:intergenic |
| CCTGTGCACTTGAGAGACAT+AGG | 0.564384 | 1_3:+61905207 | None:intergenic |
| TGCAGCTGTACCCATGGTAG+AGG | 0.565756 | 1_3:-61900643 | Msa0131190:intron |
| CTCTGAAGCTGATATGCAAG+AGG | 0.568295 | 1_3:-61907757 | Msa0131190:CDS |
| AGCTACCATGGCCTCTACCA+TGG | 0.568585 | 1_3:+61900632 | None:intergenic |
| ACCAGAAGCAACCCTTCCAA+TGG | 0.569596 | 1_3:+61906998 | None:intergenic |
| CCTATGTCTCTCAAGTGCAC+AGG | 0.572163 | 1_3:-61905207 | Msa0131190:CDS |
| CAACCTCTCGGGACAACACA+GGG | 0.572864 | 1_3:+61901035 | None:intergenic |
| CATATGTTGTAACCCGAAAG+TGG | 0.573615 | 1_3:+61907841 | None:intergenic |
| ACAAGAACAAACCGCTCTGG+TGG | 0.573699 | 1_3:-61901986 | Msa0131190:CDS |
| ACAGGGATCATGACGACCAC+GGG | 0.574091 | 1_3:+61901052 | None:intergenic |
| TGCTAGGGAAACCATTGGAA+GGG | 0.574957 | 1_3:-61907009 | Msa0131190:CDS |
| TGTACCCATGGTAGAGGCCA+TGG | 0.577435 | 1_3:-61900637 | Msa0131190:CDS |
| GTCATAGGTTGCATCCGCAT+GGG | 0.577755 | 1_3:+61907162 | None:intergenic |
| CTGCTAGGGAAACCATTGGA+AGG | 0.577836 | 1_3:-61907010 | Msa0131190:CDS |
| GTGAAAGGTGATTCTGTTGG+TGG | 0.578147 | 1_3:-61903894 | Msa0131190:CDS |
| GTGAATCCAAGAAGCGAACA+AGG | 0.578442 | 1_3:-61909075 | Msa0131190:five_prime_UTR |
| CAACAGAATCACCTTTCACT+CGG | 0.578783 | 1_3:+61903898 | None:intergenic |
| AGGACAAGAACAAACCGCTC+TGG | 0.581332 | 1_3:-61901989 | Msa0131190:CDS |
| TGGTGGTAGATCTTCTGCTA+GGG | 0.582067 | 1_3:-61907024 | Msa0131190:CDS |
| ACAACATATGGAGAATCTCA+TGG | 0.584104 | 1_3:-61907828 | Msa0131190:CDS |
| TTATATAGATCAAAATGGAA+AGG | 0.585581 | 1_3:-61902014 | Msa0131190:CDS |
| GATCAAGTGTCAGTGTCTCA+TGG | 0.586576 | 1_3:+61905158 | None:intergenic |
| ATTGATGCTGTCCGAGTGAA+AGG | 0.587265 | 1_3:-61903909 | Msa0131190:CDS |
| GCTACCATGGCCTCTACCAT+GGG | 0.587349 | 1_3:+61900633 | None:intergenic |
| TGCATATCAGCTTCAGAGAG+AGG | 0.589694 | 1_3:+61907762 | None:intergenic |
| TTACAGAGATTCGGGCAGCT+GGG | 0.592616 | 1_3:-61907878 | Msa0131190:intron |
| GCTTCAGAGAGAGGGAGGCG+AGG | 0.596196 | 1_3:+61907771 | None:intergenic |
| GCATATCAGCTTCAGAGAGA+GGG | 0.596658 | 1_3:+61907763 | None:intergenic |
| GAAGCAATCTACAGTGACTC+GGG | 0.598566 | 1_3:-61901099 | Msa0131190:CDS |
| AGTAACTGGGAAATGGTGGT+AGG | 0.600229 | 1_3:-61908944 | Msa0131190:five_prime_UTR |
| GTGCCCAATACTGATCAAAG+AGG | 0.603337 | 1_3:-61907324 | Msa0131190:CDS |
| CACAAGTACCAAAGCTACCA+TGG | 0.605561 | 1_3:+61900620 | None:intergenic |
| CACAGGGATCATGACGACCA+CGG | 0.605920 | 1_3:+61901051 | None:intergenic |
| TGAACTTGCAGCTGTACCCA+TGG | 0.607274 | 1_3:-61900649 | Msa0131190:intron |
| TATGGAGAATCTCATGGAGG+AGG | 0.607485 | 1_3:-61907822 | Msa0131190:CDS |
| TAGGTTGCATCCGCATGGGA+AGG | 0.607769 | 1_3:+61907166 | None:intergenic |
| ATACTCTCAGGAGTTTCGGA+AGG | 0.610665 | 1_3:-61907462 | Msa0131190:intron |
| AGAAGCAATCTACAGTGACT+CGG | 0.610730 | 1_3:-61901100 | Msa0131190:CDS |
| CCAACCTCTCGGGACAACAC+AGG | 0.611393 | 1_3:+61901034 | None:intergenic |
| AGCTTATAGGCCTTCCCATG+CGG | 0.616697 | 1_3:-61907176 | Msa0131190:CDS |
| AATCGGTTCGGGAAGGAGTG+AGG | 0.619223 | 1_3:+61908708 | None:intergenic |
| GGTGGAGATCGAAGAAGCCA+TGG | 0.622096 | 1_3:+61908739 | None:intergenic |
| GCGTAATTCTAGCATAGTAG+TGG | 0.622148 | 1_3:+61908903 | None:intergenic |
| GTTCGGGAAGGAGTGAGGAA+GGG | 0.624145 | 1_3:+61908713 | None:intergenic |
| AAATTGAAAACCCTTAGTTG+CGG | 0.624146 | 1_3:+61902215 | None:intergenic |
| TCAGAGAGAGGGAGGCGAGG+AGG | 0.627324 | 1_3:+61907774 | None:intergenic |
| GAGAAAGAATCGGTTCGGGA+AGG | 0.628737 | 1_3:+61908701 | None:intergenic |
| TGCAAGAGGATCTTGACAGA+AGG | 0.632234 | 1_3:-61907743 | Msa0131190:intron |
| CAAGAACAAACCGCTCTGGT+GGG | 0.632701 | 1_3:-61901985 | Msa0131190:CDS |
| ACCAAAGCAGACACCAGCAA+AGG | 0.639168 | 1_3:-61909004 | Msa0131190:five_prime_UTR |
| TGTTTGAGGTTCGGTAATGG+TGG | 0.641901 | 1_3:+61908823 | None:intergenic |
| GGGCAGTAACTGGGAAATGG+TGG | 0.642610 | 1_3:-61908948 | Msa0131190:five_prime_UTR |
| CTTACTGTAATAGTCGATGT+CGG | 0.643905 | 1_3:+61901800 | None:intergenic |
| TATCAGCTTCAGAGAGAGGG+AGG | 0.644707 | 1_3:+61907766 | None:intergenic |
| TAGATCAAAATGGAAAGGTG+AGG | 0.648351 | 1_3:-61902009 | Msa0131190:CDS |
| AAAGGACCAATGACCAAACA+AGG | 0.652812 | 1_3:-61908986 | Msa0131190:five_prime_UTR |
| AATAGCAATAGCAATAGCCA+TGG | 0.652972 | 1_3:-61908756 | Msa0131190:exon |
| TTTCCCAGTTACTGCCCACG+TGG | 0.653902 | 1_3:+61908954 | None:intergenic |
| CGAGTGAAAGGTGATTCTGT+TGG | 0.682023 | 1_3:-61903897 | Msa0131190:CDS |
| GAAACAGAGCTCATAGCCCG+TGG | 0.694287 | 1_3:-61901068 | Msa0131190:CDS |
| ACGAGGACGGAGGTAGACGG+AGG | 0.699102 | 1_3:+61908640 | None:intergenic |
| GTGTTGTAACATGCATTGTG+AGG | 0.723456 | 1_3:-61903872 | Msa0131190:CDS |
| GATCCCTGTGTTGTCCCGAG+AGG | 0.731256 | 1_3:-61901038 | Msa0131190:intron |
| ACATATGGAGAATCTCATGG+AGG | 0.763629 | 1_3:-61907825 | Msa0131190:CDS |
| ATACCTGTATCCCACCAGAG+CGG | 0.816288 | 1_3:+61901975 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTAATTAATATAA+AGG | - | chr1_3:61908904-61908923 | Msa0131190:five_prime_UTR | 0.0% |
| !!! | AATTGTTGTTATTATTTTTA+TGG | - | chr1_3:61900646-61900665 | Msa0131190:intron | 10.0% |
| !!! | TTTTATACATTTTATCTTAA+AGG | + | chr1_3:61904773-61904792 | None:intergenic | 10.0% |
| !!! | TTTAAGATAAAATGTATAAA+AGG | - | chr1_3:61904772-61904791 | Msa0131190:intron | 10.0% |
| !!! | TAATTTGTTAATTTGTTAAT+TGG | - | chr1_3:61906025-61906044 | Msa0131190:intron | 10.0% |
| !!! | AATTTGTTAATTTGTTAATT+GGG | - | chr1_3:61906026-61906045 | Msa0131190:intron | 10.0% |
| !! | AAAAATACTAATAAAATTCA+AGG | + | chr1_3:61906125-61906144 | None:intergenic | 10.0% |
| !! | ATATTTACTAAATTAATTTC+TGG | + | chr1_3:61906472-61906491 | None:intergenic | 10.0% |
| !! | TATTTAAATATCAAATAACA+GGG | + | chr1_3:61906689-61906708 | None:intergenic | 10.0% |
| !! | TTATTTAAATATCAAATAAC+AGG | + | chr1_3:61906690-61906709 | None:intergenic | 10.0% |
| !! | TATTGTTTATATTTAAATCA+GGG | - | chr1_3:61907340-61907359 | Msa0131190:CDS | 10.0% |
| !! | TATACATTAATTAATATTGA+GGG | + | chr1_3:61907694-61907713 | None:intergenic | 10.0% |
| !! | AACATAAAACTTTAAATAAT+GGG | + | chr1_3:61908242-61908261 | None:intergenic | 10.0% |
| !!! | AAAATTTCGTAATTTTTTAT+TGG | - | chr1_3:61908535-61908554 | Msa0131190:intron | 10.0% |
| !! | GAATTTCAACATTATTAAAT+TGG | - | chr1_3:61900927-61900946 | Msa0131190:intron | 15.0% |
| !! | TGAGAATTGAAAAAAATATA+TGG | - | chr1_3:61901109-61901128 | Msa0131190:intron | 15.0% |
| !! | AAAGAAATTTAACATTAGTA+TGG | + | chr1_3:61902305-61902324 | None:intergenic | 15.0% |
| !!! | TTTCTTTAATGTTTTTTAAC+AGG | - | chr1_3:61902318-61902337 | Msa0131190:intron | 15.0% |
| !! | TGATTAAAACGAATATTATA+GGG | + | chr1_3:61902828-61902847 | None:intergenic | 15.0% |
| !! | ATGATTAAAACGAATATTAT+AGG | + | chr1_3:61902829-61902848 | None:intergenic | 15.0% |
| !! | ATTTGATATAACAATTTGTA+TGG | - | chr1_3:61904641-61904660 | Msa0131190:intron | 15.0% |
| !! | TGTATAAATAAATATCTCAA+AGG | - | chr1_3:61904682-61904701 | Msa0131190:intron | 15.0% |
| !! | GTATAAATAAATATCTCAAA+GGG | - | chr1_3:61904683-61904702 | Msa0131190:intron | 15.0% |
| !! | TATAAATAAATATCTCAAAG+GGG | - | chr1_3:61904684-61904703 | Msa0131190:intron | 15.0% |
| !!! | CTCTTTTTGTATTTATTTAT+TGG | - | chr1_3:61904926-61904945 | Msa0131190:intron | 15.0% |
| !! | TAAAATAAGTAGTATGAATT+AGG | + | chr1_3:61905008-61905027 | None:intergenic | 15.0% |
| !!! | TAATGTTACTTTTTCTTTTT+TGG | - | chr1_3:61905113-61905132 | Msa0131190:intron | 15.0% |
| !! | TATAAAGTTACAAATCAATA+GGG | + | chr1_3:61906759-61906778 | None:intergenic | 15.0% |
| !! | ATATAAAGTTACAAATCAAT+AGG | + | chr1_3:61906760-61906779 | None:intergenic | 15.0% |
| !!! | GAATTTTATATAGATCAAAA+TGG | - | chr1_3:61907190-61907209 | Msa0131190:CDS | 15.0% |
| !! | GTATTGTTTATATTTAAATC+AGG | - | chr1_3:61907339-61907358 | Msa0131190:CDS | 15.0% |
| !! | ATACATTAATTAATATTGAG+GGG | + | chr1_3:61907693-61907712 | None:intergenic | 15.0% |
| !! | GTATACATTAATTAATATTG+AGG | + | chr1_3:61907695-61907714 | None:intergenic | 15.0% |
| !! | CAACATAAAACTTTAAATAA+TGG | + | chr1_3:61908243-61908262 | None:intergenic | 15.0% |
| !! | GTTGAAATTTAATAGAAAAT+CGG | + | chr1_3:61908479-61908498 | None:intergenic | 15.0% |
| !! | AAAGAGAAAAAAAAATAACA+TGG | + | chr1_3:61908937-61908956 | None:intergenic | 15.0% |
| !!! | ATGTATTTTTTATAGTGAAT+TGG | - | chr1_3:61909010-61909029 | Msa0131190:five_prime_UTR | 15.0% |
| !! | ATAACAACAATTCAAACAAA+CGG | + | chr1_3:61900638-61900657 | None:intergenic | 20.0% |
| !! | ACAACATTAAGATTGAAAAA+TGG | + | chr1_3:61900740-61900759 | None:intergenic | 20.0% |
| !! | TTTCAACATTATTAAATTGG+CGG | - | chr1_3:61900930-61900949 | Msa0131190:intron | 20.0% |
| !!! | ATTTTATTGAAATGCTAGTA+AGG | - | chr1_3:61901576-61901595 | Msa0131190:intron | 20.0% |
| !!! | TTTTATTGAAATGCTAGTAA+GGG | - | chr1_3:61901577-61901596 | Msa0131190:intron | 20.0% |
| !!! | CTTTAAAGAATAACATTGTA+AGG | - | chr1_3:61901656-61901675 | Msa0131190:intron | 20.0% |
| !! | TCGTATAATTTATTAATTGC+AGG | - | chr1_3:61901831-61901850 | Msa0131190:CDS | 20.0% |
| !! | TGTTCAGAAATATTCAATAA+AGG | - | chr1_3:61901927-61901946 | Msa0131190:intron | 20.0% |
| !!! | CTAATAAAATGTTGTACTTT+TGG | - | chr1_3:61901978-61901997 | Msa0131190:intron | 20.0% |
| !! | AAAATCCTTAAAAAATTTGC+AGG | - | chr1_3:61902246-61902265 | Msa0131190:CDS | 20.0% |
| !! | CTGTATTGTTCTTTAATTAA+TGG | + | chr1_3:61902421-61902440 | None:intergenic | 20.0% |
| !!! | ACTTCTTCTTTCTTATTTAT+GGG | - | chr1_3:61902505-61902524 | Msa0131190:intron | 20.0% |
| !! | CAAGATACATATGAAAAATT+AGG | - | chr1_3:61902722-61902741 | Msa0131190:intron | 20.0% |
| !!! | ATATACTGGTTATTTTGTTT+TGG | - | chr1_3:61902774-61902793 | Msa0131190:intron | 20.0% |
| !!! | TATTCGTTTTAATCATTGTT+TGG | - | chr1_3:61902833-61902852 | Msa0131190:intron | 20.0% |
| !!! | TATAGGAGATTATATTTTCT+GGG | + | chr1_3:61903215-61903234 | None:intergenic | 20.0% |
| !!! | AATGCAAACAGTTTTATAAA+AGG | + | chr1_3:61904120-61904139 | None:intergenic | 20.0% |
| !!! | AATACTTTTTTATGGACATT+TGG | - | chr1_3:61904199-61904218 | Msa0131190:intron | 20.0% |
| !! | ACTGAGTTTAAATTTAACAA+AGG | + | chr1_3:61904390-61904409 | None:intergenic | 20.0% |
| !! | TGACAACATTATTAAGAAAA+TGG | - | chr1_3:61904559-61904578 | Msa0131190:intron | 20.0% |
| !! | GACAACATTATTAAGAAAAT+GGG | - | chr1_3:61904560-61904579 | Msa0131190:intron | 20.0% |
| !! | AATCATTAGATACAGTTATT+TGG | + | chr1_3:61904882-61904901 | None:intergenic | 20.0% |
| !!! | TATCTAATGATTACTTTTCA+TGG | - | chr1_3:61904890-61904909 | Msa0131190:intron | 20.0% |
| !! | AAATAAATACAAAAAGAGCA+AGG | + | chr1_3:61904924-61904943 | None:intergenic | 20.0% |
| !! | AAATAATTCTGCAAGAAAAT+AGG | - | chr1_3:61905401-61905420 | Msa0131190:intron | 20.0% |
| !! | AATAATTCTGCAAGAAAATA+GGG | - | chr1_3:61905402-61905421 | Msa0131190:intron | 20.0% |
| !!! | TTTTATTGGGAAACTATATT+TGG | - | chr1_3:61905470-61905489 | Msa0131190:intron | 20.0% |
| !!! | TTAAAATGGTTTTAAGTGAA+GGG | + | chr1_3:61905797-61905816 | None:intergenic | 20.0% |
| !!! | TTCACTTAAAACCATTTTAA+GGG | - | chr1_3:61905797-61905816 | Msa0131190:intron | 20.0% |
| !!! | TGTGACTTTTATTTCAAATT+AGG | - | chr1_3:61906176-61906195 | Msa0131190:intron | 20.0% |
| !!! | TGAATTTTGAGTAATGTTTA+AGG | - | chr1_3:61906208-61906227 | Msa0131190:intron | 20.0% |
| !! | TGCAAATTTAATACTTGTAT+CGG | + | chr1_3:61906634-61906653 | None:intergenic | 20.0% |
| !! | CTAAAAAAATTACATTGATC+AGG | + | chr1_3:61907091-61907110 | None:intergenic | 20.0% |
| !! | TAGCTTAATGAAATCTTTAT+AGG | - | chr1_3:61907136-61907155 | Msa0131190:CDS | 20.0% |
| !! | TTATATAGATCAAAATGGAA+AGG | - | chr1_3:61907195-61907214 | Msa0131190:CDS | 20.0% |
| !!! | TAGAAACAACTAATTTGTTA+TGG | + | chr1_3:61907270-61907289 | None:intergenic | 20.0% |
| !! | GAAATAATTAACATGAGAAT+AGG | - | chr1_3:61907379-61907398 | Msa0131190:intron | 20.0% |
| !! | ACATTAGATTTATGTCTTTA+TGG | + | chr1_3:61908431-61908450 | None:intergenic | 20.0% |
| !! | AAAGACATAAATCTAATGTT+AGG | - | chr1_3:61908432-61908451 | Msa0131190:intron | 20.0% |
| !! | GATACATATATATATGTTTG+CGG | - | chr1_3:61908864-61908883 | Msa0131190:five_prime_UTR | 20.0% |
| !! | ATACATATATATATGTTTGC+GGG | - | chr1_3:61908865-61908884 | Msa0131190:five_prime_UTR | 20.0% |
| ! | AAAAGTTGAATTGAATTGGT+TGG | + | chr1_3:61900347-61900366 | None:intergenic | 25.0% |
| !! | AATGAAATACTCTTTGTTTG+AGG | + | chr1_3:61900403-61900422 | None:intergenic | 25.0% |
| ! | AAAGTAGCAGAAAATAAAGA+AGG | + | chr1_3:61900788-61900807 | None:intergenic | 25.0% |
| !!! | AATTTTGGTACAGAAAATTC+AGG | + | chr1_3:61900829-61900848 | None:intergenic | 25.0% |
| ! | TTGAAGTTGAAAATAAAGCT+GGG | + | chr1_3:61901156-61901175 | None:intergenic | 25.0% |
| !! | TTTGAAGTTGAAAATAAAGC+TGG | + | chr1_3:61901157-61901176 | None:intergenic | 25.0% |
| ! | ACTTCAAATTCCAATTAGTT+TGG | - | chr1_3:61901169-61901188 | Msa0131190:intron | 25.0% |
| !! | TGATGTATTTTACAGAGATT+CGG | - | chr1_3:61901322-61901341 | Msa0131190:intron | 25.0% |
| ! | TTACAATAGTTATGAGAAGA+CGG | + | chr1_3:61901515-61901534 | None:intergenic | 25.0% |
| ! | TAGAGGAATAATGTATAAGA+TGG | - | chr1_3:61901553-61901572 | Msa0131190:intron | 25.0% |
| ! | TCTTTACAGTGTAATAAGTT+AGG | - | chr1_3:61902104-61902123 | Msa0131190:intron | 25.0% |
| ! | TTAACCTTTCAATAGAAACT+TGG | - | chr1_3:61902381-61902400 | Msa0131190:intron | 25.0% |
| ! | AATACCAAGTTTCTATTGAA+AGG | + | chr1_3:61902388-61902407 | None:intergenic | 25.0% |
| ! | TTTCAATAGAAACTTGGTAT+TGG | - | chr1_3:61902387-61902406 | Msa0131190:intron | 25.0% |
| ! | TTCAATAGAAACTTGGTATT+GGG | - | chr1_3:61902388-61902407 | Msa0131190:intron | 25.0% |
| !! | CACTTCTTCTTTCTTATTTA+TGG | - | chr1_3:61902504-61902523 | Msa0131190:intron | 25.0% |
| ! | ATATTATGTGTTAGGACATT+TGG | + | chr1_3:61902599-61902618 | None:intergenic | 25.0% |
| !!! | CAATGTGAATGATTTGTTTT+AGG | + | chr1_3:61902628-61902647 | None:intergenic | 25.0% |
| ! | TAACCAGTATATTATAGACA+GGG | + | chr1_3:61902766-61902785 | None:intergenic | 25.0% |
| ! | ATAACCAGTATATTATAGAC+AGG | + | chr1_3:61902767-61902786 | None:intergenic | 25.0% |
| ! | ATTTCAGCTATAATGATCAA+AGG | + | chr1_3:61903088-61903107 | None:intergenic | 25.0% |
| ! | TGAAATGATATAGAGTGAAA+TGG | - | chr1_3:61903102-61903121 | Msa0131190:intron | 25.0% |
| !! | GTATAGGAGATTATATTTTC+TGG | + | chr1_3:61903216-61903235 | None:intergenic | 25.0% |
| ! | TGGCTTATTAGATAAAGAAT+TGG | - | chr1_3:61903402-61903421 | Msa0131190:intron | 25.0% |
| !!! | CTAATAACTCTAAAACCTTT+TGG | + | chr1_3:61903591-61903610 | None:intergenic | 25.0% |
| ! | AAACACGTTAAACAGTTAAA+AGG | + | chr1_3:61903925-61903944 | None:intergenic | 25.0% |
| !!! | AATGATATTTCTGGATGAAT+TGG | + | chr1_3:61903954-61903973 | None:intergenic | 25.0% |
| ! | AATTCATCCAGAAATATCAT+TGG | - | chr1_3:61903953-61903972 | Msa0131190:CDS | 25.0% |
| !!! | CTACTTTTAATTCCATTTCA+TGG | - | chr1_3:61904276-61904295 | Msa0131190:intron | 25.0% |
| ! | CAAAATCATTAGTTGTAACA+TGG | + | chr1_3:61904324-61904343 | None:intergenic | 25.0% |
| !! | GTTACAACTAATGATTTTGT+CGG | - | chr1_3:61904325-61904344 | Msa0131190:intron | 25.0% |
| !!! | TGATGATGAATGTATTGATT+TGG | - | chr1_3:61904732-61904751 | Msa0131190:intron | 25.0% |
| !!! | ATGTATTGATTTGGTAGTAA+AGG | - | chr1_3:61904741-61904760 | Msa0131190:intron | 25.0% |
| !!! | TGTATTGATTTGGTAGTAAA+GGG | - | chr1_3:61904742-61904761 | Msa0131190:intron | 25.0% |
| !!! | ATTATTTTTACTTGTCAGAG+AGG | + | chr1_3:61905388-61905407 | None:intergenic | 25.0% |
| !!! | CTTAAAATGGTTTTAAGTGA+AGG | + | chr1_3:61905798-61905817 | None:intergenic | 25.0% |
| !! | CTTCACTTAAAACCATTTTA+AGG | - | chr1_3:61905796-61905815 | Msa0131190:intron | 25.0% |
| ! | TACAAAAATGACCCTTAAAA+TGG | + | chr1_3:61905811-61905830 | None:intergenic | 25.0% |
| !!! | TTGTTAATTTGTTAATTGGG+AGG | - | chr1_3:61906029-61906048 | Msa0131190:intron | 25.0% |
| !!! | TTTGTTACTTTAAGCTTTAG+AGG | - | chr1_3:61906083-61906102 | Msa0131190:intron | 25.0% |
| !! | ATACGTGATATAGAATTTTG+TGG | - | chr1_3:61906490-61906509 | Msa0131190:intron | 25.0% |
| !!! | TTAATTGCCATTGGTTTTTT+TGG | + | chr1_3:61906521-61906540 | None:intergenic | 25.0% |
| ! | TGAGTTTATTTAATTGCCAT+TGG | + | chr1_3:61906530-61906549 | None:intergenic | 25.0% |
| !! | TTAATACTTGTATCGGTATA+TGG | + | chr1_3:61906627-61906646 | None:intergenic | 25.0% |
| ! | ATAATAGGAATGAGAGAAAA+AGG | - | chr1_3:61906706-61906725 | Msa0131190:intron | 25.0% |
| !! | CAATACAAACATAAAGTACT+TGG | + | chr1_3:61906853-61906872 | None:intergenic | 25.0% |
| !! | AAATGACTTCATTATTTCTC+AGG | - | chr1_3:61906908-61906927 | Msa0131190:intron | 25.0% |
| !! | AATGACTTCATTATTTCTCA+GGG | - | chr1_3:61906909-61906928 | Msa0131190:intron | 25.0% |
| ! | TGTTTATATTTAAATCAGGG+TGG | - | chr1_3:61907343-61907362 | Msa0131190:CDS | 25.0% |
| !! | CATGTTAATTATTTCTCCAT+TGG | + | chr1_3:61907374-61907393 | None:intergenic | 25.0% |
| ! | TAAGTGTTAAAAGTTGTGTA+TGG | - | chr1_3:61907612-61907631 | Msa0131190:intron | 25.0% |
| ! | AAGTGTTAAAAGTTGTGTAT+GGG | - | chr1_3:61907613-61907632 | Msa0131190:intron | 25.0% |
| ! | ATTAATATTGAGGGGATATA+AGG | + | chr1_3:61907685-61907704 | None:intergenic | 25.0% |
| ! | TCTCATTCAAATAGAGAAAA+TGG | + | chr1_3:61907842-61907861 | None:intergenic | 25.0% |
| ! | TAATGGGATGAAAATAAGAT+AGG | + | chr1_3:61908226-61908245 | None:intergenic | 25.0% |
| !! | GCAACAAATTTTGTAGTTTT+TGG | - | chr1_3:61909041-61909060 | Msa0131190:five_prime_UTR | 25.0% |
| ! | TGTTTCAATAAATGAAGCTT+TGG | - | chr1_3:61909092-61909111 | Msa0131190:five_prime_UTR | 25.0% |
| !! | TTTTATCCTTGTTTGGTCAT+TGG | + | chr1_3:61900232-61900251 | None:intergenic | 30.0% |
| TCGCAAAAGTTGAATTGAAT+TGG | + | chr1_3:61900351-61900370 | None:intergenic | 30.0% | |
| ! | AATACTCTTTGTTTGAGGTT+CGG | + | chr1_3:61900398-61900417 | None:intergenic | 30.0% |
| !!! | TACTAACGGAGTTGTTTTTT+GGG | + | chr1_3:61900598-61900617 | None:intergenic | 30.0% |
| !!! | ATACTAACGGAGTTGTTTTT+TGG | + | chr1_3:61900599-61900618 | None:intergenic | 30.0% |
| ! | ACCAAAATTTTCCAGTTGTA+AGG | - | chr1_3:61900840-61900859 | Msa0131190:intron | 30.0% |
| ! | TCCTTACAACTGGAAAATTT+TGG | + | chr1_3:61900844-61900863 | None:intergenic | 30.0% |
| ! | AAATTTTCCAGTTGTAAGGA+TGG | - | chr1_3:61900844-61900863 | Msa0131190:intron | 30.0% |
| ACTGCAATGTCAATATTGTT+AGG | - | chr1_3:61900980-61900999 | Msa0131190:intron | 30.0% | |
| TAGTCTCAAACCAAACTAAT+TGG | + | chr1_3:61901182-61901201 | None:intergenic | 30.0% | |
| ! | GATGTATTTTACAGAGATTC+GGG | - | chr1_3:61901323-61901342 | Msa0131190:intron | 30.0% |
| AACTATTGTAAAAAGCCCTT+TGG | - | chr1_3:61901524-61901543 | Msa0131190:intron | 30.0% | |
| CATTATGAATGATAGCTGAT+AGG | - | chr1_3:61901607-61901626 | Msa0131190:intron | 30.0% | |
| ATTGTAAGGTTCTTGTGTAT+AGG | - | chr1_3:61901670-61901689 | Msa0131190:intron | 30.0% | |
| GATACATGTAAAATACTCTC+AGG | - | chr1_3:61901735-61901754 | Msa0131190:intron | 30.0% | |
| TAAAATACTCTCAGGAGTTT+CGG | - | chr1_3:61901743-61901762 | Msa0131190:intron | 30.0% | |
| TTCTTCTTACTGCTATTAAC+TGG | - | chr1_3:61901777-61901796 | Msa0131190:intron | 30.0% | |
| TCTTCTTACTGCTATTAACT+GGG | - | chr1_3:61901778-61901797 | Msa0131190:intron | 30.0% | |
| TTTCCTCTTTGATCAGTATT+GGG | + | chr1_3:61901891-61901910 | None:intergenic | 30.0% | |
| ATTTCCTCTTTGATCAGTAT+TGG | + | chr1_3:61901892-61901911 | None:intergenic | 30.0% | |
| TTTATTAGCCACGTAAATCA+AGG | + | chr1_3:61901966-61901985 | None:intergenic | 30.0% | |
| !!! | GTACTTTTGGATACTTTTTC+AGG | - | chr1_3:61901991-61902010 | Msa0131190:CDS | 30.0% |
| ACATCTGAACTCCTATATTT+AGG | - | chr1_3:61902161-61902180 | Msa0131190:intron | 30.0% | |
| CATCTGAACTCCTATATTTA+GGG | - | chr1_3:61902162-61902181 | Msa0131190:intron | 30.0% | |
| !!! | CAGTTCCTGCAAATTTTTTA+AGG | + | chr1_3:61902254-61902273 | None:intergenic | 30.0% |
| TAAAAAATTTGCAGGAACTG+AGG | - | chr1_3:61902254-61902273 | Msa0131190:CDS | 30.0% | |
| CTAACATGATAGATCATTCT+TGG | + | chr1_3:61902344-61902363 | None:intergenic | 30.0% | |
| CAAGAATGATCTATCATGTT+AGG | - | chr1_3:61902342-61902361 | Msa0131190:intron | 30.0% | |
| AAGAACAATACAGAACTTCA+AGG | - | chr1_3:61902428-61902447 | Msa0131190:intron | 30.0% | |
| AGAACAATACAGAACTTCAA+GGG | - | chr1_3:61902429-61902448 | Msa0131190:intron | 30.0% | |
| TGAGATAGTTGTAAGAAATG+AGG | + | chr1_3:61902538-61902557 | None:intergenic | 30.0% | |
| ! | AAGTAGTTAGTTGGTTAGTT+GGG | + | chr1_3:61902562-61902581 | None:intergenic | 30.0% |
| AGGTTTATCAAGTAGTTAGT+TGG | + | chr1_3:61902571-61902590 | None:intergenic | 30.0% | |
| !!! | GTGAATGATTTGTTTTAGGT+GGG | + | chr1_3:61902624-61902643 | None:intergenic | 30.0% |
| !!! | TGTGAATGATTTGTTTTAGG+TGG | + | chr1_3:61902625-61902644 | None:intergenic | 30.0% |
| TCATCGTGCTTTCAATATTA+GGG | + | chr1_3:61902701-61902720 | None:intergenic | 30.0% | |
| TTCATCGTGCTTTCAATATT+AGG | + | chr1_3:61902702-61902721 | None:intergenic | 30.0% | |
| ! | TTTGGTCCCTATAATTGTTT+TGG | - | chr1_3:61902792-61902811 | Msa0131190:intron | 30.0% |
| TTTCGGCCAAAACAATTATA+GGG | + | chr1_3:61902801-61902820 | None:intergenic | 30.0% | |
| ATTTCGGCCAAAACAATTAT+AGG | + | chr1_3:61902802-61902821 | None:intergenic | 30.0% | |
| !!! | TATAATTGTTTTGGCCGAAA+TGG | - | chr1_3:61902801-61902820 | Msa0131190:intron | 30.0% |
| GAATATTATAGGGACCATTT+CGG | + | chr1_3:61902818-61902837 | None:intergenic | 30.0% | |
| ATTGAGCTAGCTATTGTTAT+GGG | + | chr1_3:61902919-61902938 | None:intergenic | 30.0% | |
| TATTGAGCTAGCTATTGTTA+TGG | + | chr1_3:61902920-61902939 | None:intergenic | 30.0% | |
| ! | AATAGCTAGCTCAATAGTTT+TGG | - | chr1_3:61902924-61902943 | Msa0131190:intron | 30.0% |
| ! | GAATTCTTTAGAGACATGAA+TGG | + | chr1_3:61902972-61902991 | None:intergenic | 30.0% |
| ATAATGATCAAAGGTTCTCT+TGG | + | chr1_3:61903079-61903098 | None:intergenic | 30.0% | |
| AGAAACATTGCAGATACAAT+AGG | + | chr1_3:61903301-61903320 | None:intergenic | 30.0% | |
| AAAAGTCCACTATATGAACA+TGG | + | chr1_3:61903340-61903359 | None:intergenic | 30.0% | |
| !!! | ATGTTCATATAGTGGACTTT+TGG | - | chr1_3:61903339-61903358 | Msa0131190:intron | 30.0% |
| TAAGCCATCAATGTTATCAA+TGG | + | chr1_3:61903389-61903408 | None:intergenic | 30.0% | |
| AGAACAAAAAAAGGAAAGCT+GGG | + | chr1_3:61903444-61903463 | None:intergenic | 30.0% | |
| ATAGGAAGGAGAACAAAAAA+AGG | + | chr1_3:61903453-61903472 | None:intergenic | 30.0% | |
| !!! | AGATCTGGTTTTTGATATGA+TGG | + | chr1_3:61903526-61903545 | None:intergenic | 30.0% |
| ! | AAAACCAGATCTAGTAGTTT+TGG | - | chr1_3:61903534-61903553 | Msa0131190:intron | 30.0% |
| ATAACCAAAACTACTAGATC+TGG | + | chr1_3:61903541-61903560 | None:intergenic | 30.0% | |
| !!! | AGATCTAGTAGTTTTGGTTA+TGG | - | chr1_3:61903540-61903559 | Msa0131190:intron | 30.0% |
| CATATTACACAAGATCAGTA+TGG | + | chr1_3:61903677-61903696 | None:intergenic | 30.0% | |
| AACAAAAAATTGAGAGAGAG+GGG | + | chr1_3:61903743-61903762 | None:intergenic | 30.0% | |
| GAACAAAAAATTGAGAGAGA+GGG | + | chr1_3:61903744-61903763 | None:intergenic | 30.0% | |
| TGAACAAAAAATTGAGAGAG+AGG | + | chr1_3:61903745-61903764 | None:intergenic | 30.0% | |
| TAACAGATTAAAGGAGTTCA+AGG | + | chr1_3:61903850-61903869 | None:intergenic | 30.0% | |
| GTCAAGTAGTATTCTAAACA+TGG | - | chr1_3:61904152-61904171 | Msa0131190:intron | 30.0% | |
| TTGAAATGCATTCCATGAAA+TGG | + | chr1_3:61904291-61904310 | None:intergenic | 30.0% | |
| ! | GATTTTGTCGGAAGAAATTT+TGG | - | chr1_3:61904337-61904356 | Msa0131190:intron | 30.0% |
| GAGTACATTTATTCGAAATG+TGG | + | chr1_3:61904429-61904448 | None:intergenic | 30.0% | |
| ! | CAAATTTTTACCATTCCAAC+TGG | - | chr1_3:61904587-61904606 | Msa0131190:intron | 30.0% |
| !! | GTATTGATTTGGTAGTAAAG+GGG | - | chr1_3:61904743-61904762 | Msa0131190:intron | 30.0% |
| CAGTTATTTGGTCAAAATAC+AGG | + | chr1_3:61904870-61904889 | None:intergenic | 30.0% | |
| GGACAAATTCCAAAAAGTAA+TGG | + | chr1_3:61905218-61905237 | None:intergenic | 30.0% | |
| GAACAATATTACTCTCAATC+TGG | + | chr1_3:61905239-61905258 | None:intergenic | 30.0% | |
| !! | TTTGGCTTTCTGAATTTCAA+CGG | - | chr1_3:61905488-61905507 | Msa0131190:intron | 30.0% |
| TAAAACTCTGTTGTCAATAG+TGG | - | chr1_3:61905612-61905631 | Msa0131190:intron | 30.0% | |
| ! | GAAATCCTGTATTTTACACA+GGG | + | chr1_3:61905775-61905794 | None:intergenic | 30.0% |
| ATGGAGAAGAGTAATAGTTA+GGG | + | chr1_3:61905844-61905863 | None:intergenic | 30.0% | |
| !!! | GATGAGATGGATTTTTTTGT+TGG | + | chr1_3:61905909-61905928 | None:intergenic | 30.0% |
| CAAGAGATTAGAACAAAGAT+GGG | + | chr1_3:61905961-61905980 | None:intergenic | 30.0% | |
| TCAAGAGATTAGAACAAAGA+TGG | + | chr1_3:61905962-61905981 | None:intergenic | 30.0% | |
| CAGAACAATCTAATAGTGAT+AGG | + | chr1_3:61906658-61906677 | None:intergenic | 30.0% | |
| ATCACTATTAGATTGTTCTG+AGG | - | chr1_3:61906658-61906677 | Msa0131190:intron | 30.0% | |
| !! | TATTAGATTGTTCTGAGGTA+TGG | - | chr1_3:61906663-61906682 | Msa0131190:intron | 30.0% |
| CATGCAAGTCGATATATAAA+GGG | + | chr1_3:61906785-61906804 | None:intergenic | 30.0% | |
| AAATTGAAAACCCTTAGTTG+CGG | + | chr1_3:61906997-61907016 | None:intergenic | 30.0% | |
| !!! | ATTTTTTTAGCAGTTGTGTC+TGG | - | chr1_3:61907101-61907120 | Msa0131190:intron | 30.0% |
| !!! | TTTTTTTAGCAGTTGTGTCT+GGG | - | chr1_3:61907102-61907121 | Msa0131190:intron | 30.0% |
| ! | TTTATAGGTACCTTTTTGAC+TGG | - | chr1_3:61907151-61907170 | Msa0131190:CDS | 30.0% |
| !! | TTATAGGTACCTTTTTGACT+GGG | - | chr1_3:61907152-61907171 | Msa0131190:CDS | 30.0% |
| AGTAAGATTACGCAAACAAA+AGG | + | chr1_3:61907961-61907980 | None:intergenic | 30.0% | |
| ACCTAAATCAGCTAAAAATG+GGG | + | chr1_3:61908019-61908038 | None:intergenic | 30.0% | |
| CACCTAAATCAGCTAAAAAT+GGG | + | chr1_3:61908020-61908039 | None:intergenic | 30.0% | |
| !! | AAAGTATTTTCCCAGTAGAT+TGG | + | chr1_3:61908386-61908405 | None:intergenic | 30.0% |
| !! | TTTCTTTTCTAGTGATGAGA+AGG | + | chr1_3:61908518-61908537 | None:intergenic | 30.0% |
| TTCTTGTAAATCAAAGTTCG+CGG | + | chr1_3:61908655-61908674 | None:intergenic | 30.0% | |
| !! | CACTTCTTCTGTTTCTAATT+TGG | + | chr1_3:61908688-61908707 | None:intergenic | 30.0% |
| ! | TGCCTTTCTGAAAATGAAAT+GGG | - | chr1_3:61908706-61908725 | Msa0131190:CDS | 30.0% |
| ! | CAGAATGAAGATTTTATCTG+AGG | + | chr1_3:61908751-61908770 | None:intergenic | 30.0% |
| CTCAGATAAAATCTTCATTC+TGG | - | chr1_3:61908749-61908768 | Msa0131190:exon | 30.0% | |
| !!! | GTGGCTTTTTTATCCTTGTT+TGG | + | chr1_3:61900239-61900258 | None:intergenic | 35.0% |
| AGTTGAATTGAATTGGTTGG+TGG | + | chr1_3:61900344-61900363 | None:intergenic | 35.0% | |
| ! | TGGCTATTGCTATTGCTATT+GGG | + | chr1_3:61900453-61900472 | None:intergenic | 35.0% |
| ! | ATGGCTATTGCTATTGCTAT+TGG | + | chr1_3:61900454-61900473 | None:intergenic | 35.0% |
| AATAGCAATAGCAATAGCCA+TGG | - | chr1_3:61900453-61900472 | Msa0131190:three_prime_UTR | 35.0% | |
| AAGGAAGGAAGAGAAAGAAT+CGG | + | chr1_3:61900521-61900540 | None:intergenic | 35.0% | |
| !!! | ACTAACGGAGTTGTTTTTTG+GGG | + | chr1_3:61900597-61900616 | None:intergenic | 35.0% |
| ACAGAGAGAGAGAATACTAA+CGG | + | chr1_3:61900612-61900631 | None:intergenic | 35.0% | |
| ATGAATTCCATCCTTACAAC+TGG | + | chr1_3:61900854-61900873 | None:intergenic | 35.0% | |
| CAATGTCAATATTGTTAGGC+TGG | - | chr1_3:61900984-61901003 | Msa0131190:intron | 35.0% | |
| TTAATCACACAAGCTGATGT+AGG | - | chr1_3:61901061-61901080 | Msa0131190:CDS | 35.0% | |
| TCTTAGGAAGTCTAGACTAA+TGG | - | chr1_3:61901258-61901277 | Msa0131190:intron | 35.0% | |
| ATGGTACTGTGATTGATGAA+TGG | - | chr1_3:61901277-61901296 | Msa0131190:intron | 35.0% | |
| TGGTACTGTGATTGATGAAT+GGG | - | chr1_3:61901278-61901297 | Msa0131190:intron | 35.0% | |
| ACAACATATGGAGAATCTCA+TGG | - | chr1_3:61901381-61901400 | Msa0131190:intron | 35.0% | |
| ! | AGACGGTGAGATAATTTTGA+AGG | + | chr1_3:61901498-61901517 | None:intergenic | 35.0% |
| TATTGTAAAAAGCCCTTTGG+AGG | - | chr1_3:61901527-61901546 | Msa0131190:intron | 35.0% | |
| TTAATTGCAGGAGTTACTAC+AGG | - | chr1_3:61901843-61901862 | Msa0131190:CDS | 35.0% | |
| GTGGTCATTAGATAGGAAAT+GGG | + | chr1_3:61902480-61902499 | None:intergenic | 35.0% | |
| TGTGGTCATTAGATAGGAAA+TGG | + | chr1_3:61902481-61902500 | None:intergenic | 35.0% | |
| !! | AAGAAAGAAGAAGTGTCATG+TGG | + | chr1_3:61902499-61902518 | None:intergenic | 35.0% |
| CAAGTAGTTAGTTGGTTAGT+TGG | + | chr1_3:61902563-61902582 | None:intergenic | 35.0% | |
| TGTTAGGACATTTGGTAAGA+AGG | + | chr1_3:61902591-61902610 | None:intergenic | 35.0% | |
| GCTTTCAATATTAGGGAACT+TGG | + | chr1_3:61902694-61902713 | None:intergenic | 35.0% | |
| TCACCCTGTCTATAATATAC+TGG | - | chr1_3:61902760-61902779 | Msa0131190:intron | 35.0% | |
| CTTGGTAAGTGATCATATTC+TGG | + | chr1_3:61903061-61903080 | None:intergenic | 35.0% | |
| ! | CAACTCTAAGGAAGACAAAA+GGG | + | chr1_3:61903185-61903204 | None:intergenic | 35.0% |
| TTGACAACATTGTAGGGTAT+AGG | + | chr1_3:61903232-61903251 | None:intergenic | 35.0% | |
| GCAGATTTGACAACATTGTA+GGG | + | chr1_3:61903238-61903257 | None:intergenic | 35.0% | |
| TGCAGATTTGACAACATTGT+AGG | + | chr1_3:61903239-61903258 | None:intergenic | 35.0% | |
| ! | ACTATATGAACATGGTGTTG+CGG | + | chr1_3:61903332-61903351 | None:intergenic | 35.0% |
| !!! | TCATATAGTGGACTTTTGGT+TGG | - | chr1_3:61903343-61903362 | Msa0131190:intron | 35.0% |
| TCAATGTTATCAATGGCGAA+TGG | + | chr1_3:61903382-61903401 | None:intergenic | 35.0% | |
| ! | TTCGCCATTGATAACATTGA+TGG | - | chr1_3:61903382-61903401 | Msa0131190:intron | 35.0% |
| GAGAACAAAAAAAGGAAAGC+TGG | + | chr1_3:61903445-61903464 | None:intergenic | 35.0% | |
| ! | TGTTGCAGAAAAGCATGAAT+AGG | + | chr1_3:61903471-61903490 | None:intergenic | 35.0% |
| TTGTTCTAGTACTTGCACAA+AGG | + | chr1_3:61903626-61903645 | None:intergenic | 35.0% | |
| TTTGTGCAAGTACTAGAACA+AGG | - | chr1_3:61903625-61903644 | Msa0131190:intron | 35.0% | |
| TTGTGCAAGTACTAGAACAA+GGG | - | chr1_3:61903626-61903645 | Msa0131190:intron | 35.0% | |
| TACACAAGATCAGTATGGAT+AGG | + | chr1_3:61903672-61903691 | None:intergenic | 35.0% | |
| TGGTTGAGCTAACAGATTAA+AGG | + | chr1_3:61903859-61903878 | None:intergenic | 35.0% | |
| GACTTAGCCAATGATATTTC+TGG | + | chr1_3:61903963-61903982 | None:intergenic | 35.0% | |
| TCATGGTCAATTAAGTCTTC+GGG | + | chr1_3:61904037-61904056 | None:intergenic | 35.0% | |
| CTCATGGTCAATTAAGTCTT+CGG | + | chr1_3:61904038-61904057 | None:intergenic | 35.0% | |
| GAAAAAGTTTCAGTTCACAG+AGG | - | chr1_3:61904468-61904487 | Msa0131190:intron | 35.0% | |
| ACGACTGATGAGTATTACTA+AGG | - | chr1_3:61904533-61904552 | Msa0131190:intron | 35.0% | |
| ACTAATGCACATTTACCAGT+TGG | + | chr1_3:61904605-61904624 | None:intergenic | 35.0% | |
| TCATCTTCTCTGCATATTCA+GGG | + | chr1_3:61905272-61905291 | None:intergenic | 35.0% | |
| ATCATCTTCTCTGCATATTC+AGG | + | chr1_3:61905273-61905292 | None:intergenic | 35.0% | |
| TAAAAGTGATAACAACCACG+AGG | - | chr1_3:61905446-61905465 | Msa0131190:intron | 35.0% | |
| AAAAGTGATAACAACCACGA+GGG | - | chr1_3:61905447-61905466 | Msa0131190:intron | 35.0% | |
| TACAACCCTGTGTAAAATAC+AGG | - | chr1_3:61905767-61905786 | Msa0131190:intron | 35.0% | |
| ! | GGAAATCCTGTATTTTACAC+AGG | + | chr1_3:61905776-61905795 | None:intergenic | 35.0% |
| GATGGAGAAGAGTAATAGTT+AGG | + | chr1_3:61905845-61905864 | None:intergenic | 35.0% | |
| TTAAACCTCTGTTGTCAAAG+CGG | + | chr1_3:61906373-61906392 | None:intergenic | 35.0% | |
| GGAAACTCCAAAAAAACCAA+TGG | - | chr1_3:61906511-61906530 | Msa0131190:intron | 35.0% | |
| AAGGTAAGATTCCAAACTCA+TGG | + | chr1_3:61906584-61906603 | None:intergenic | 35.0% | |
| TGATACAGCAAAAATCTGGA+AGG | + | chr1_3:61906603-61906622 | None:intergenic | 35.0% | |
| TGGATGATACAGCAAAAATC+TGG | + | chr1_3:61906607-61906626 | None:intergenic | 35.0% | |
| GCATGCAAGTCGATATATAA+AGG | + | chr1_3:61906786-61906805 | None:intergenic | 35.0% | |
| TTGCATGCCTGATATCTTAT+AGG | - | chr1_3:61906798-61906817 | Msa0131190:intron | 35.0% | |
| GGAAATGCCTATAAGATATC+AGG | + | chr1_3:61906808-61906827 | None:intergenic | 35.0% | |
| TTGGTTGCAAAACAATGCAA+AGG | + | chr1_3:61906834-61906853 | None:intergenic | 35.0% | |
| ! | TTCATTATTTCTCAGGGTCT+TGG | - | chr1_3:61906915-61906934 | Msa0131190:intron | 35.0% |
| ! | GCTTCAAGTTTGTCAAATAC+TGG | + | chr1_3:61906945-61906964 | None:intergenic | 35.0% |
| AATTGAAAACCCTTAGTTGC+GGG | + | chr1_3:61906996-61907015 | None:intergenic | 35.0% | |
| ! | GCAACTAAGGGTTTTCAATT+TGG | - | chr1_3:61906996-61907015 | Msa0131190:CDS | 35.0% |
| ! | AAGGGTTTTCAATTTGGTAG+TGG | - | chr1_3:61907002-61907021 | Msa0131190:CDS | 35.0% |
| !! | AGGGTTTTCAATTTGGTAGT+GGG | - | chr1_3:61907003-61907022 | Msa0131190:CDS | 35.0% |
| !!! | TTTTTTAGCAGTTGTGTCTG+GGG | - | chr1_3:61907103-61907122 | Msa0131190:intron | 35.0% |
| TAGATCAAAATGGAAAGGTG+AGG | - | chr1_3:61907200-61907219 | Msa0131190:intron | 35.0% | |
| CTTACTGTAATAGTCGATGT+CGG | + | chr1_3:61907412-61907431 | None:intergenic | 35.0% | |
| CATATCAAAAACCAATGCCA+GGG | - | chr1_3:61907550-61907569 | Msa0131190:intron | 35.0% | |
| ATATCAAAAACCAATGCCAG+GGG | - | chr1_3:61907551-61907570 | Msa0131190:intron | 35.0% | |
| !! | CTACACAGTTGATCTTGTTT+TGG | + | chr1_3:61907781-61907800 | None:intergenic | 35.0% |
| CAAAACAAGATCAACTGTGT+AGG | - | chr1_3:61907779-61907798 | Msa0131190:CDS | 35.0% | |
| CTAAATCAGCTAAAAATGGG+GGG | + | chr1_3:61908017-61908036 | None:intergenic | 35.0% | |
| CCTAAATCAGCTAAAAATGG+GGG | + | chr1_3:61908018-61908037 | None:intergenic | 35.0% | |
| CCACCTAAATCAGCTAAAAA+TGG | + | chr1_3:61908021-61908040 | None:intergenic | 35.0% | |
| !!! | CCATTTTTAGCTGATTTAGG+TGG | - | chr1_3:61908018-61908037 | Msa0131190:intron | 35.0% |
| ! | CAATGTTAACTCGGTTCTAA+AGG | + | chr1_3:61908303-61908322 | None:intergenic | 35.0% |
| CTTTCAGGACAATGTTAACT+CGG | + | chr1_3:61908312-61908331 | None:intergenic | 35.0% | |
| GAGTTAACATTGTCCTGAAA+GGG | - | chr1_3:61908311-61908330 | Msa0131190:intron | 35.0% | |
| AAACATTATCTCACCCTTTC+AGG | + | chr1_3:61908327-61908346 | None:intergenic | 35.0% | |
| ! | ATTTTCCCAGTAGATTGGAT+CGG | + | chr1_3:61908381-61908400 | None:intergenic | 35.0% |
| !! | TTTTCTAGTGATGAGAAGGT+AGG | + | chr1_3:61908514-61908533 | None:intergenic | 35.0% |
| TCTTGTAAATCAAAGTTCGC+GGG | + | chr1_3:61908654-61908673 | None:intergenic | 35.0% | |
| ! | TGTTTCTAATTTGGCTGACA+AGG | + | chr1_3:61908679-61908698 | None:intergenic | 35.0% |
| ! | GTGCCTTTCTGAAAATGAAA+TGG | - | chr1_3:61908705-61908724 | Msa0131190:CDS | 35.0% |
| ! | CACCCATTTCATTTTCAGAA+AGG | + | chr1_3:61908711-61908730 | None:intergenic | 35.0% |
| TGGGTGCATATATCAGTAAT+TGG | - | chr1_3:61908725-61908744 | Msa0131190:CDS | 35.0% | |
| TAACTTCCTTGTTCGCTTCT+TGG | + | chr1_3:61900143-61900162 | None:intergenic | 40.0% | |
| TGTCTGCTTTGGTAAGTTGT+TGG | + | chr1_3:61900198-61900217 | None:intergenic | 40.0% | |
| AAAGGACCAATGACCAAACA+AGG | - | chr1_3:61900223-61900242 | Msa0131190:three_prime_UTR | 40.0% | |
| ACAAGGATAAAAAAGCCACG+TGG | - | chr1_3:61900240-61900259 | Msa0131190:three_prime_UTR | 40.0% | |
| CAAGGATAAAAAAGCCACGT+GGG | - | chr1_3:61900241-61900260 | Msa0131190:three_prime_UTR | 40.0% | |
| GCGTAATTCTAGCATAGTAG+TGG | + | chr1_3:61900309-61900328 | None:intergenic | 40.0% | |
| !! | ATTGAATTGGTTGGTGGCAA+TGG | + | chr1_3:61900338-61900357 | None:intergenic | 40.0% |
| ! | CTTTGTTTGAGGTTCGGTAA+TGG | + | chr1_3:61900392-61900411 | None:intergenic | 40.0% |
| AGGAAGAGAAAGAATCGGTT+CGG | + | chr1_3:61900516-61900535 | None:intergenic | 40.0% | |
| ATTGGAATTGGGAGAAAGGA+AGG | + | chr1_3:61900536-61900555 | None:intergenic | 40.0% | |
| !!! | AGTTGTTTTTTGGGGAAACG+AGG | + | chr1_3:61900589-61900608 | None:intergenic | 40.0% |
| !! | AATTCAGGTTGCACAAAGAG+TGG | + | chr1_3:61900814-61900833 | None:intergenic | 40.0% |
| ATTGACATTGCAGTTGAGCT+AGG | + | chr1_3:61900974-61900993 | None:intergenic | 40.0% | |
| GTACATATGGGAACCACTTT+CGG | - | chr1_3:61901355-61901374 | Msa0131190:intron | 40.0% | |
| TACATATGGGAACCACTTTC+GGG | - | chr1_3:61901356-61901375 | Msa0131190:intron | 40.0% | |
| CATATGTTGTAACCCGAAAG+TGG | + | chr1_3:61901371-61901390 | None:intergenic | 40.0% | |
| !! | CACTTTCGGGTTACAACATA+TGG | - | chr1_3:61901369-61901388 | Msa0131190:intron | 40.0% |
| ACATATGGAGAATCTCATGG+AGG | - | chr1_3:61901384-61901403 | Msa0131190:intron | 40.0% | |
| ATTCCTCTATAGCCTCCAAA+GGG | + | chr1_3:61901542-61901561 | None:intergenic | 40.0% | |
| TATTCCTCTATAGCCTCCAA+AGG | + | chr1_3:61901543-61901562 | None:intergenic | 40.0% | |
| GTAAGGTTCTTGTGTATAGG+AGG | - | chr1_3:61901673-61901692 | Msa0131190:intron | 40.0% | |
| ! | CCTTTCTGGGAGTTGTAATT+CGG | + | chr1_3:61901710-61901729 | None:intergenic | 40.0% |
| CATGTATCAGTCTCCTTTCT+GGG | + | chr1_3:61901723-61901742 | None:intergenic | 40.0% | |
| ACATGTATCAGTCTCCTTTC+TGG | + | chr1_3:61901724-61901743 | None:intergenic | 40.0% | |
| TTGGGCACAAATACATGGAT+TGG | + | chr1_3:61901873-61901892 | None:intergenic | 40.0% | |
| ! | CAGTATTGGGCACAAATACA+TGG | + | chr1_3:61901878-61901897 | None:intergenic | 40.0% |
| AACCATGACCTTGATTTACG+TGG | - | chr1_3:61901955-61901974 | Msa0131190:intron | 40.0% | |
| ! | GCGAGATGTCATTAGCTTAT+AGG | - | chr1_3:61902020-61902039 | Msa0131190:CDS | 40.0% |
| GCAACCTATGACATGAAGTA+TGG | - | chr1_3:61902058-61902077 | Msa0131190:intron | 40.0% | |
| GACACCATACTTCATGTCAT+AGG | + | chr1_3:61902065-61902084 | None:intergenic | 40.0% | |
| CTGAACTCCTATATTTAGGG+TGG | - | chr1_3:61902165-61902184 | Msa0131190:intron | 40.0% | |
| ! | AACTCCTATATTTAGGGTGG+TGG | - | chr1_3:61902168-61902187 | Msa0131190:intron | 40.0% |
| TCTACCACCACCCTAAATAT+AGG | + | chr1_3:61902175-61902194 | None:intergenic | 40.0% | |
| GTGTCATGTGGTCATTAGAT+AGG | + | chr1_3:61902487-61902506 | None:intergenic | 40.0% | |
| GGTGGGTGATATTATGTGTT+AGG | + | chr1_3:61902607-61902626 | None:intergenic | 40.0% | |
| ACTGCAAGTTGTTCAACTTG+AGG | + | chr1_3:61902652-61902671 | None:intergenic | 40.0% | |
| !! | ATTGTTATGGGCACTGAAGA+AGG | + | chr1_3:61902907-61902926 | None:intergenic | 40.0% |
| ! | ATTTTCTCTCTCTCAGCAAG+AGG | - | chr1_3:61903006-61903025 | Msa0131190:intron | 40.0% |
| ATAGAGTGAAATGGCCTACT+AGG | - | chr1_3:61903111-61903130 | Msa0131190:intron | 40.0% | |
| AATTGAGAACCAGACCTAGT+AGG | + | chr1_3:61903128-61903147 | None:intergenic | 40.0% | |
| AGACAAAAGGGTTAGAAAGC+AGG | + | chr1_3:61903173-61903192 | None:intergenic | 40.0% | |
| ! | GCAACTCTAAGGAAGACAAA+AGG | + | chr1_3:61903186-61903205 | None:intergenic | 40.0% |
| ATGTTGTCAAATCTGCACCA+TGG | - | chr1_3:61903242-61903261 | Msa0131190:intron | 40.0% | |
| ! | ACAATAGGTGTTGCAGTCAA+TGG | + | chr1_3:61903286-61903305 | None:intergenic | 40.0% |
| ! | ATCTGCAATGTTTCTGCCAT+AGG | - | chr1_3:61903306-61903325 | Msa0131190:intron | 40.0% |
| GCAACACCATGTTCATATAG+TGG | - | chr1_3:61903331-61903350 | Msa0131190:intron | 40.0% | |
| ! | GCAGAAAAGCATGAATAGGA+AGG | + | chr1_3:61903467-61903486 | None:intergenic | 40.0% |
| TGTGCAAGTACTAGAACAAG+GGG | - | chr1_3:61903627-61903646 | Msa0131190:intron | 40.0% | |
| ACAAGATCAGTATGGATAGG+AGG | + | chr1_3:61903669-61903688 | None:intergenic | 40.0% | |
| AGGGGAGATATCTAGTAAGT+AGG | + | chr1_3:61903725-61903744 | None:intergenic | 40.0% | |
| TCACCAATGCATGTTTGATG+CGG | - | chr1_3:61903762-61903781 | Msa0131190:intron | 40.0% | |
| AATCCGCATCAAACATGCAT+TGG | + | chr1_3:61903768-61903787 | None:intergenic | 40.0% | |
| TTAAAGGAGTTCAAGGTCCA+GGG | + | chr1_3:61903843-61903862 | None:intergenic | 40.0% | |
| ATTAAAGGAGTTCAAGGTCC+AGG | + | chr1_3:61903844-61903863 | None:intergenic | 40.0% | |
| ACATATATCCACACCAAACG+AGG | + | chr1_3:61903901-61903920 | None:intergenic | 40.0% | |
| TTGTAGTCAAGCCTGCTTAT+CGG | - | chr1_3:61904241-61904260 | Msa0131190:intron | 40.0% | |
| !! | CTTTCTAGTTTCCGATAAGC+AGG | + | chr1_3:61904255-61904274 | None:intergenic | 40.0% |
| TGCACATTTACCAGTTGGAA+TGG | + | chr1_3:61904600-61904619 | None:intergenic | 40.0% | |
| AGGTCATTCTCGTCAAAACA+TGG | - | chr1_3:61904792-61904811 | Msa0131190:intron | 40.0% | |
| GGTCATTCTCGTCAAAACAT+GGG | - | chr1_3:61904793-61904812 | Msa0131190:intron | 40.0% | |
| TGAGCCAATTTGAAAGACTG+CGG | + | chr1_3:61905074-61905093 | None:intergenic | 40.0% | |
| CAACAGAATCACCTTTCACT+CGG | + | chr1_3:61905314-61905333 | None:intergenic | 40.0% | |
| GTGTTGTAACATGCATTGTG+AGG | - | chr1_3:61905337-61905356 | Msa0131190:intron | 40.0% | |
| !! | AACAACCACGAGGGTTTTAT+TGG | - | chr1_3:61905456-61905475 | Msa0131190:intron | 40.0% |
| !!! | ACAACCACGAGGGTTTTATT+GGG | - | chr1_3:61905457-61905476 | Msa0131190:intron | 40.0% |
| CGATGAAGAAGTTGTGTTTG+CGG | + | chr1_3:61905884-61905903 | None:intergenic | 40.0% | |
| GATGAGATGAGAAGATGAGA+TGG | + | chr1_3:61905922-61905941 | None:intergenic | 40.0% | |
| !! | GCTTTAGAGGCTTAAAGTGT+CGG | - | chr1_3:61906096-61906115 | Msa0131190:intron | 40.0% |
| GGACTAAAAGATGGTCTTTG+AGG | + | chr1_3:61906416-61906435 | None:intergenic | 40.0% | |
| CAAGCAATATTACAGTCGCA+GGG | + | chr1_3:61906440-61906459 | None:intergenic | 40.0% | |
| TCAAGCAATATTACAGTCGC+AGG | + | chr1_3:61906441-61906460 | None:intergenic | 40.0% | |
| ! | CATCTAGGATTCCATGAGTT+TGG | - | chr1_3:61906570-61906589 | Msa0131190:intron | 40.0% |
| TGCAAAACAATGCAAAGGAG+TGG | + | chr1_3:61906829-61906848 | None:intergenic | 40.0% | |
| TGACAAACTTGAAGCTGAGT+TGG | - | chr1_3:61906950-61906969 | Msa0131190:intron | 40.0% | |
| ATCAGTGCTTTGTCTTGTAC+AGG | - | chr1_3:61907061-61907080 | Msa0131190:intron | 40.0% | |
| TCAGTGCTTTGTCTTGTACA+GGG | - | chr1_3:61907062-61907081 | Msa0131190:intron | 40.0% | |
| AATCAGGGTGGAATTTCCAA+TGG | - | chr1_3:61907355-61907374 | Msa0131190:CDS | 40.0% | |
| !!! | CCTGGCATTGGTTTTTGATA+TGG | + | chr1_3:61907552-61907571 | None:intergenic | 40.0% |
| CCATATCAAAAACCAATGCC+AGG | - | chr1_3:61907549-61907568 | Msa0131190:intron | 40.0% | |
| TGGTTAGTAGAGTGATAAGG+AGG | + | chr1_3:61907653-61907672 | None:intergenic | 40.0% | |
| TGGTGGTTAGTAGAGTGATA+AGG | + | chr1_3:61907656-61907675 | None:intergenic | 40.0% | |
| !! | GGGATATAAGGTTGATTTGG+TGG | + | chr1_3:61907673-61907692 | None:intergenic | 40.0% |
| ! | GAGGGGATATAAGGTTGATT+TGG | + | chr1_3:61907676-61907695 | None:intergenic | 40.0% |
| ACCATCATCTGATCAGTGTA+CGG | - | chr1_3:61907888-61907907 | Msa0131190:intron | 40.0% | |
| ! | GGTTAGACATGCTGTGTTTT+CGG | - | chr1_3:61907918-61907937 | Msa0131190:intron | 40.0% |
| ! | GTTAGACATGCTGTGTTTTC+GGG | - | chr1_3:61907919-61907938 | Msa0131190:intron | 40.0% |
| ! | TTAGACATGCTGTGTTTTCG+GGG | - | chr1_3:61907920-61907939 | Msa0131190:intron | 40.0% |
| ATCTTACTGCTTCCATTCCT+TGG | - | chr1_3:61907973-61907992 | Msa0131190:intron | 40.0% | |
| !!! | CCCCCATTTTTAGCTGATTT+AGG | - | chr1_3:61908015-61908034 | Msa0131190:intron | 40.0% |
| AGAAGCAATCTACAGTGACT+CGG | - | chr1_3:61908109-61908128 | Msa0131190:intron | 40.0% | |
| GATAGGCAGCATTTCAGAAA+AGG | + | chr1_3:61908209-61908228 | None:intergenic | 40.0% | |
| CGAGTTAACATTGTCCTGAA+AGG | - | chr1_3:61908310-61908329 | Msa0131190:intron | 40.0% | |
| ! | TCATTCTGGCTAGTGTTTAG+TGG | - | chr1_3:61908763-61908782 | Msa0131190:five_prime_UTR | 40.0% |
| TCCAAGAACTGGATCTCTTA+CGG | + | chr1_3:61908824-61908843 | None:intergenic | 40.0% | |
| GTGAATCCAAGAAGCGAACA+AGG | - | chr1_3:61900134-61900153 | Msa0131190:three_prime_UTR | 45.0% | |
| ! | GTTGTTGGTGAGTCGAGAAT+GGG | + | chr1_3:61900183-61900202 | None:intergenic | 45.0% |
| ! | AGTTGTTGGTGAGTCGAGAA+TGG | + | chr1_3:61900184-61900203 | None:intergenic | 45.0% |
| TTTGGTCATTGGTCCTTTGC+TGG | + | chr1_3:61900221-61900240 | None:intergenic | 45.0% | |
| AGTAACTGGGAAATGGTGGT+AGG | - | chr1_3:61900265-61900284 | Msa0131190:three_prime_UTR | 45.0% | |
| ! | TGTTTGAGGTTCGGTAATGG+TGG | + | chr1_3:61900389-61900408 | None:intergenic | 45.0% |
| ! | GGAAGAGAAAGAATCGGTTC+GGG | + | chr1_3:61900515-61900534 | None:intergenic | 45.0% |
| GGAGATTGGAATTGGGAGAA+AGG | + | chr1_3:61900540-61900559 | None:intergenic | 45.0% | |
| AGGGATCGGAGATTGGAATT+GGG | + | chr1_3:61900547-61900566 | None:intergenic | 45.0% | |
| !!! | GTTTTTTGGGGAAACGAGGA+CGG | + | chr1_3:61900585-61900604 | None:intergenic | 45.0% |
| ! | GTTACTGCTACTTCTCATGC+TGG | - | chr1_3:61901230-61901249 | Msa0131190:intron | 45.0% |
| TATGGAGAATCTCATGGAGG+AGG | - | chr1_3:61901387-61901406 | Msa0131190:intron | 45.0% | |
| ! | GGTGTTGGATGTGTCATTGA+TGG | - | chr1_3:61901408-61901427 | Msa0131190:intron | 45.0% |
| GCATATCAGCTTCAGAGAGA+GGG | + | chr1_3:61901449-61901468 | None:intergenic | 45.0% | |
| TGCATATCAGCTTCAGAGAG+AGG | + | chr1_3:61901450-61901469 | None:intergenic | 45.0% | |
| !! | CTCTGAAGCTGATATGCAAG+AGG | - | chr1_3:61901452-61901471 | Msa0131190:intron | 45.0% |
| TGCAAGAGGATCTTGACAGA+AGG | - | chr1_3:61901466-61901485 | Msa0131190:intron | 45.0% | |
| ! | GTTGTAATTCGGCTTTGACC+TGG | + | chr1_3:61901699-61901718 | None:intergenic | 45.0% |
| CCGAATTACAACTCCCAGAA+AGG | - | chr1_3:61901707-61901726 | Msa0131190:intron | 45.0% | |
| ATACTCTCAGGAGTTTCGGA+AGG | - | chr1_3:61901747-61901766 | Msa0131190:intron | 45.0% | |
| GTGCCCAATACTGATCAAAG+AGG | - | chr1_3:61901885-61901904 | Msa0131190:intron | 45.0% | |
| AGCCACGTAAATCAAGGTCA+TGG | + | chr1_3:61901960-61901979 | None:intergenic | 45.0% | |
| ! | GTATGGTGTCAGATCAGTTC+AGG | - | chr1_3:61902075-61902094 | Msa0131190:intron | 45.0% |
| TGGTGGTAGATCTTCTGCTA+GGG | - | chr1_3:61902185-61902204 | Msa0131190:intron | 45.0% | |
| TCTTCTGCTAGGGAAACCAT+TGG | - | chr1_3:61902195-61902214 | Msa0131190:intron | 45.0% | |
| TGCTAGGGAAACCATTGGAA+GGG | - | chr1_3:61902200-61902219 | Msa0131190:CDS | 45.0% | |
| GATAGGAAATGGGAGCCTTT+CGG | + | chr1_3:61902470-61902489 | None:intergenic | 45.0% | |
| GAGTGAATTCACGAGTCACT+TGG | - | chr1_3:61903031-61903050 | Msa0131190:intron | 45.0% | |
| TTGTCAAATCTGCACCATGG+TGG | - | chr1_3:61903245-61903264 | Msa0131190:intron | 45.0% | |
| TGTCAAATCTGCACCATGGT+GGG | - | chr1_3:61903246-61903265 | Msa0131190:intron | 45.0% | |
| ! | ATAGGTGTTGCAGTCAATGG+TGG | + | chr1_3:61903283-61903302 | None:intergenic | 45.0% |
| AATGGCGAATGGCAGAGTAT+GGG | + | chr1_3:61903371-61903390 | None:intergenic | 45.0% | |
| !! | AGAGGAGGTTTTGGCAAAAG+TGG | + | chr1_3:61903495-61903514 | None:intergenic | 45.0% |
| !! | GATATGATGGATGACTGCAG+AGG | + | chr1_3:61903513-61903532 | None:intergenic | 45.0% |
| ! | TGGAAGCTTGCTTACCAGTT+TGG | - | chr1_3:61903560-61903579 | Msa0131190:intron | 45.0% |
| !! | ACCAGTTTGGTGTCACCAAA+AGG | - | chr1_3:61903573-61903592 | Msa0131190:intron | 45.0% |
| !! | ACCTTTTGGTGACACCAAAC+TGG | + | chr1_3:61903577-61903596 | None:intergenic | 45.0% |
| GATCAGTATGGATAGGAGGA+TGG | + | chr1_3:61903665-61903684 | None:intergenic | 45.0% | |
| ATATCCACACCAAACGAGGA+GGG | + | chr1_3:61903897-61903916 | None:intergenic | 45.0% | |
| TATATCCACACCAAACGAGG+AGG | + | chr1_3:61903898-61903917 | None:intergenic | 45.0% | |
| GATCAAGTGTCAGTGTCTCA+TGG | + | chr1_3:61904054-61904073 | None:intergenic | 45.0% | |
| TGAGACACTGACACTTGATC+AGG | - | chr1_3:61904054-61904073 | Msa0131190:intron | 45.0% | |
| ! | GTCTGATCAGAAGAGCATGA+CGG | + | chr1_3:61905042-61905061 | None:intergenic | 45.0% |
| CTTGCCGCAGTCTTTCAAAT+TGG | - | chr1_3:61905067-61905086 | Msa0131190:intron | 45.0% | |
| CAGGAATTCGACTTCAGAGA+TGG | + | chr1_3:61905190-61905209 | None:intergenic | 45.0% | |
| TTCTCTGCATATTCAGGGTC+TGG | + | chr1_3:61905267-61905286 | None:intergenic | 45.0% | |
| ATTGATGCTGTCCGAGTGAA+AGG | - | chr1_3:61905300-61905319 | Msa0131190:intron | 45.0% | |
| CGAGTGAAAGGTGATTCTGT+TGG | - | chr1_3:61905312-61905331 | Msa0131190:intron | 45.0% | |
| GTGAAAGGTGATTCTGTTGG+TGG | - | chr1_3:61905315-61905334 | Msa0131190:intron | 45.0% | |
| GAGGTGAAAAGACTTACACG+TGG | + | chr1_3:61905369-61905388 | None:intergenic | 45.0% | |
| GTTTCCCAATAAAACCCTCG+TGG | + | chr1_3:61905464-61905483 | None:intergenic | 45.0% | |
| ! | GCGTTGCGTTTTTCCGTTTT+TGG | + | chr1_3:61905653-61905672 | None:intergenic | 45.0% |
| CGCAATTGCGGGTATAAAGT+GGG | - | chr1_3:61905716-61905735 | Msa0131190:intron | 45.0% | |
| !! | GGCTGTGTATTTGGTTCTGA+TGG | + | chr1_3:61905863-61905882 | None:intergenic | 45.0% |
| TGTGTTTGCGGCTGTGTATT+TGG | + | chr1_3:61905872-61905891 | None:intergenic | 45.0% | |
| CTGTTGTCAAAGCGGAAATG+CGG | + | chr1_3:61906365-61906384 | None:intergenic | 45.0% | |
| CATTTCCGCTTTGACAACAG+AGG | - | chr1_3:61906365-61906384 | Msa0131190:intron | 45.0% | |
| TATGTCATTGCCCGCAACTA+AGG | - | chr1_3:61906983-61907002 | Msa0131190:CDS | 45.0% | |
| ATGTCATTGCCCGCAACTAA+GGG | - | chr1_3:61906984-61907003 | Msa0131190:CDS | 45.0% | |
| !! | CAATTTGGTAGTGGGTTTGC+AGG | - | chr1_3:61907011-61907030 | Msa0131190:CDS | 45.0% |
| GTGTTCACTCCCAGTCAAAA+AGG | + | chr1_3:61907164-61907183 | None:intergenic | 45.0% | |
| GAGAGAGAGAGAGAGGATAT+TGG | + | chr1_3:61907436-61907455 | None:intergenic | 45.0% | |
| ! | GTTGCGCTCAAGTTCTAACT+TGG | - | chr1_3:61907583-61907602 | Msa0131190:intron | 45.0% |
| TCAAGTGTGAAAACGGTGTG+GGG | + | chr1_3:61907742-61907761 | None:intergenic | 45.0% | |
| CTCAAGTGTGAAAACGGTGT+GGG | + | chr1_3:61907743-61907762 | None:intergenic | 45.0% | |
| CCTCACCTCAAGTGTGAAAA+CGG | + | chr1_3:61907749-61907768 | None:intergenic | 45.0% | |
| ! | CGTTTTCACACTTGAGGTGA+GGG | - | chr1_3:61907747-61907766 | Msa0131190:CDS | 45.0% |
| CCATCATCTGATCAGTGTAC+GGG | - | chr1_3:61907889-61907908 | Msa0131190:intron | 45.0% | |
| TGATCAGTGTACGGGATGTA+TGG | - | chr1_3:61907897-61907916 | Msa0131190:intron | 45.0% | |
| !! | TGTTTTCGGGGTAGCAATTG+AGG | - | chr1_3:61907932-61907951 | Msa0131190:intron | 45.0% |
| AACATCTGCATGCCAAGGAA+TGG | + | chr1_3:61907988-61908007 | None:intergenic | 45.0% | |
| ATGTGAACATCTGCATGCCA+AGG | + | chr1_3:61907993-61908012 | None:intergenic | 45.0% | |
| GTAGATTGCTTCTTCTGCAC+AGG | + | chr1_3:61908102-61908121 | None:intergenic | 45.0% | |
| GAAGCAATCTACAGTGACTC+GGG | - | chr1_3:61908110-61908129 | Msa0131190:intron | 45.0% | |
| ATGTAGCCGATCCAATCTAC+TGG | - | chr1_3:61908372-61908391 | Msa0131190:intron | 45.0% | |
| TGTAGCCGATCCAATCTACT+GGG | - | chr1_3:61908373-61908392 | Msa0131190:intron | 45.0% | |
| CACAAGTACCAAAGCTACCA+TGG | + | chr1_3:61908592-61908611 | None:intergenic | 45.0% | |
| !! | CATGGTAGCTTTGGTACTTG+TGG | - | chr1_3:61908590-61908609 | Msa0131190:intron | 45.0% |
| GGTACTTGTGGACCAATTGA+TGG | - | chr1_3:61908602-61908621 | Msa0131190:intron | 45.0% | |
| GTGCATGTTGTGCCATCAAT+TGG | + | chr1_3:61908617-61908636 | None:intergenic | 45.0% | |
| TCCGTAAGAGATCCAGTTCT+TGG | - | chr1_3:61908820-61908839 | Msa0131190:five_prime_UTR | 45.0% | |
| TTGGACTGCATGTCGTATTC+TGG | - | chr1_3:61908839-61908858 | Msa0131190:five_prime_UTR | 45.0% | |
| !! | TATATTATTATTACATTATT+TGG | - | chr1_3:61900900-61900919 | Msa0131190:intron | 5.0% |
| !!! | TTATTTTTAATACTTTTTTA+TGG | - | chr1_3:61904191-61904210 | Msa0131190:intron | 5.0% |
| !! | TTATTTGATATTTAAATAAT+AGG | - | chr1_3:61906691-61906710 | Msa0131190:intron | 5.0% |
| GTGAGTCGAGAATGGGAAGA+TGG | + | chr1_3:61900176-61900195 | None:intergenic | 50.0% | |
| ACCAAAGCAGACACCAGCAA+AGG | - | chr1_3:61900205-61900224 | Msa0131190:three_prime_UTR | 50.0% | |
| TCCTTTGCTGGTGTCTGCTT+TGG | + | chr1_3:61900209-61900228 | None:intergenic | 50.0% | |
| !! | GAGAAAGAATCGGTTCGGGA+AGG | + | chr1_3:61900511-61900530 | None:intergenic | 50.0% |
| GAGGGATCGGAGATTGGAAT+TGG | + | chr1_3:61900548-61900567 | None:intergenic | 50.0% | |
| TGCAGTTGAGCTAGGCCTTA+CGG | + | chr1_3:61900966-61900985 | None:intergenic | 50.0% | |
| TTAGGCTGGACACTTTCACC+CGG | - | chr1_3:61900998-61901017 | Msa0131190:intron | 50.0% | |
| TCTCATGCTGGTCGCATCTT+AGG | - | chr1_3:61901242-61901261 | Msa0131190:intron | 50.0% | |
| TTTACAGAGATTCGGGCAGC+TGG | - | chr1_3:61901330-61901349 | Msa0131190:intron | 50.0% | |
| TTACAGAGATTCGGGCAGCT+GGG | - | chr1_3:61901331-61901350 | Msa0131190:intron | 50.0% | |
| ! | GAATCTCATGGAGGAGGTGT+TGG | - | chr1_3:61901393-61901412 | Msa0131190:intron | 50.0% |
| TATCAGCTTCAGAGAGAGGG+AGG | + | chr1_3:61901446-61901465 | None:intergenic | 50.0% | |
| ! | AAGCCCTTTGGAGGCTATAG+AGG | - | chr1_3:61901536-61901555 | Msa0131190:intron | 50.0% |
| GTTCTTGTGTATAGGAGGCC+AGG | - | chr1_3:61901678-61901697 | Msa0131190:intron | 50.0% | |
| AGCTTATAGGCCTTCCCATG+CGG | - | chr1_3:61902033-61902052 | Msa0131190:CDS | 50.0% | |
| GTCATAGGTTGCATCCGCAT+GGG | + | chr1_3:61902050-61902069 | None:intergenic | 50.0% | |
| TGTCATAGGTTGCATCCGCA+TGG | + | chr1_3:61902051-61902070 | None:intergenic | 50.0% | |
| GTGGTGGTAGATCTTCTGCT+AGG | - | chr1_3:61902184-61902203 | Msa0131190:intron | 50.0% | |
| CTGCTAGGGAAACCATTGGA+AGG | - | chr1_3:61902199-61902218 | Msa0131190:CDS | 50.0% | |
| ACCATTGGAAGGGTTGCTTC+TGG | - | chr1_3:61902210-61902229 | Msa0131190:CDS | 50.0% | |
| ACCAGAAGCAACCCTTCCAA+TGG | + | chr1_3:61902214-61902233 | None:intergenic | 50.0% | |
| GTGAAATGGCCTACTAGGTC+TGG | - | chr1_3:61903116-61903135 | Msa0131190:intron | 50.0% | |
| GGCTAACACAAAACCCACCA+TGG | + | chr1_3:61903262-61903281 | None:intergenic | 50.0% | |
| ATGGCGAATGGCAGAGTATG+GGG | + | chr1_3:61903370-61903389 | None:intergenic | 50.0% | |
| CAATGGCGAATGGCAGAGTA+TGG | + | chr1_3:61903372-61903391 | None:intergenic | 50.0% | |
| ! | GATGACTGCAGAGGAGGTTT+TGG | + | chr1_3:61903504-61903523 | None:intergenic | 50.0% |
| !! | ATGATGGATGACTGCAGAGG+AGG | + | chr1_3:61903510-61903529 | None:intergenic | 50.0% |
| CAGGGTTCGAATCTTGGCAA+GGG | + | chr1_3:61903825-61903844 | None:intergenic | 50.0% | |
| AAGGTCCAGGGTTCGAATCT+TGG | + | chr1_3:61903831-61903850 | None:intergenic | 50.0% | |
| TATCCACACCAAACGAGGAG+GGG | + | chr1_3:61903896-61903915 | None:intergenic | 50.0% | |
| CCTGTGCACTTGAGAGACAT+AGG | + | chr1_3:61904005-61904024 | None:intergenic | 50.0% | |
| CCTATGTCTCTCAAGTGCAC+AGG | - | chr1_3:61904002-61904021 | Msa0131190:intron | 50.0% | |
| TTGTCAATAGTGGCCGATCG+CGG | - | chr1_3:61905622-61905641 | Msa0131190:intron | 50.0% | |
| TTTGGAGAAAGCGGCTGAAG+CGG | - | chr1_3:61905692-61905711 | Msa0131190:intron | 50.0% | |
| GCGCAATTGCGGGTATAAAG+TGG | - | chr1_3:61905715-61905734 | Msa0131190:intron | 50.0% | |
| !! | TCGCAGGGTGGACTAAAAGA+TGG | + | chr1_3:61906425-61906444 | None:intergenic | 50.0% |
| GCAATATTACAGTCGCAGGG+TGG | + | chr1_3:61906437-61906456 | None:intergenic | 50.0% | |
| ! | CTCAGACTAGCTGTGCTCTT+TGG | - | chr1_3:61906546-61906565 | Msa0131190:intron | 50.0% |
| GCTGTGCTCTTTGGTCATCT+AGG | - | chr1_3:61906555-61906574 | Msa0131190:intron | 50.0% | |
| AGGACAAGAACAAACCGCTC+TGG | - | chr1_3:61907220-61907239 | Msa0131190:intron | 50.0% | |
| ACAAGAACAAACCGCTCTGG+TGG | - | chr1_3:61907223-61907242 | Msa0131190:intron | 50.0% | |
| CAAGAACAAACCGCTCTGGT+GGG | - | chr1_3:61907224-61907243 | Msa0131190:intron | 50.0% | |
| ATACCTGTATCCCACCAGAG+CGG | + | chr1_3:61907237-61907256 | None:intergenic | 50.0% | |
| AGAGAGAGAGAGAGAGAGAG+AGG | + | chr1_3:61907441-61907460 | None:intergenic | 50.0% | |
| CTCATTTACTCCCCTGGCAT+TGG | + | chr1_3:61907564-61907583 | None:intergenic | 50.0% | |
| CAAGTGTGAAAACGGTGTGG+GGG | + | chr1_3:61907741-61907760 | None:intergenic | 50.0% | |
| CCTCAAGTGTGAAAACGGTG+TGG | + | chr1_3:61907744-61907763 | None:intergenic | 50.0% | |
| ! | CCACACCGTTTTCACACTTG+AGG | - | chr1_3:61907741-61907760 | Msa0131190:intron | 50.0% |
| ! | CCGTTTTCACACTTGAGGTG+AGG | - | chr1_3:61907746-61907765 | Msa0131190:CDS | 50.0% |
| CCCGTACACTGATCAGATGA+TGG | + | chr1_3:61907892-61907911 | None:intergenic | 50.0% | |
| AGGCTGAGATACCAACCTCT+CGG | + | chr1_3:61908189-61908208 | None:intergenic | 50.0% | |
| TGAACTTGCAGCTGTACCCA+TGG | - | chr1_3:61908560-61908579 | Msa0131190:intron | 50.0% | |
| ACGACATGCAGTCCAAGAAC+TGG | + | chr1_3:61908835-61908854 | None:intergenic | 50.0% | |
| AAAGCCACGTGGGCAGTAAC+TGG | - | chr1_3:61900251-61900270 | Msa0131190:three_prime_UTR | 55.0% | |
| AAGCCACGTGGGCAGTAACT+GGG | - | chr1_3:61900252-61900271 | Msa0131190:three_prime_UTR | 55.0% | |
| TTTCCCAGTTACTGCCCACG+TGG | + | chr1_3:61900258-61900277 | None:intergenic | 55.0% | |
| CGTGGGCAGTAACTGGGAAA+TGG | - | chr1_3:61900258-61900277 | Msa0131190:three_prime_UTR | 55.0% | |
| GGGCAGTAACTGGGAAATGG+TGG | - | chr1_3:61900261-61900280 | Msa0131190:three_prime_UTR | 55.0% | |
| GGTGGAGATCGAAGAAGCCA+TGG | + | chr1_3:61900473-61900492 | None:intergenic | 55.0% | |
| AGGAGTGAGGAAGGGTTTGG+TGG | + | chr1_3:61900491-61900510 | None:intergenic | 55.0% | |
| GGAAGGAGTGAGGAAGGGTT+TGG | + | chr1_3:61900494-61900513 | None:intergenic | 55.0% | |
| GTTCGGGAAGGAGTGAGGAA+GGG | + | chr1_3:61900499-61900518 | None:intergenic | 55.0% | |
| !! | AATCGGTTCGGGAAGGAGTG+AGG | + | chr1_3:61900504-61900523 | None:intergenic | 55.0% |
| GAAACGAGGACGGAGGTAGA+CGG | + | chr1_3:61900575-61900594 | None:intergenic | 55.0% | |
| !! | TTTTGGGGAAACGAGGACGG+AGG | + | chr1_3:61900582-61900601 | None:intergenic | 55.0% |
| TAGGCTGGACACTTTCACCC+GGG | - | chr1_3:61900999-61901018 | Msa0131190:intron | 55.0% | |
| ! | GGGCAGCTGGGAGTACATAT+GGG | - | chr1_3:61901343-61901362 | Msa0131190:intron | 55.0% |
| TAGGTTGCATCCGCATGGGA+AGG | + | chr1_3:61902046-61902065 | None:intergenic | 55.0% | |
| GAAATGGGAGCCTTTCGGCA+GGG | + | chr1_3:61902465-61902484 | None:intergenic | 55.0% | |
| CTGGGTCAAGCGCAACTCTA+AGG | + | chr1_3:61903197-61903216 | None:intergenic | 55.0% | |
| !! | GAACATGGTGTTGCGGCCTA+TGG | + | chr1_3:61903325-61903344 | None:intergenic | 55.0% |
| CCAGGGTTCGAATCTTGGCA+AGG | + | chr1_3:61903826-61903845 | None:intergenic | 55.0% | |
| CCTTGCCAAGATTCGAACCC+TGG | - | chr1_3:61903823-61903842 | Msa0131190:intron | 55.0% | |
| ACACCAAACGAGGAGGGGAT+GGG | + | chr1_3:61903891-61903910 | None:intergenic | 55.0% | |
| TTTCTCCAAACGCTCCGCGT+TGG | + | chr1_3:61905682-61905701 | None:intergenic | 55.0% | |
| TTGGAGAAAGCGGCTGAAGC+GGG | - | chr1_3:61905693-61905712 | Msa0131190:intron | 55.0% | |
| GGTATAAAGTGGGCGCGATG+CGG | - | chr1_3:61905726-61905745 | Msa0131190:intron | 55.0% | |
| GTATAAAGTGGGCGCGATGC+GGG | - | chr1_3:61905727-61905746 | Msa0131190:intron | 55.0% | |
| AGCGGGCACTATTTCGGTGA+CGG | + | chr1_3:61906293-61906312 | None:intergenic | 55.0% | |
| GGCCACCCCAAAAATTGACG+CGG | + | chr1_3:61906334-61906353 | None:intergenic | 55.0% | |
| AAACCGCTCTGGTGGGATAC+AGG | - | chr1_3:61907231-61907250 | Msa0131190:intron | 55.0% | |
| GCGCAACTCATTTACTCCCC+TGG | + | chr1_3:61907570-61907589 | None:intergenic | 55.0% | |
| GAAACAGAGCTCATAGCCCG+TGG | - | chr1_3:61908141-61908160 | Msa0131190:intron | 55.0% | |
| ACAGGGATCATGACGACCAC+GGG | + | chr1_3:61908160-61908179 | None:intergenic | 55.0% | |
| CACAGGGATCATGACGACCA+CGG | + | chr1_3:61908161-61908180 | None:intergenic | 55.0% | |
| CAACCTCTCGGGACAACACA+GGG | + | chr1_3:61908177-61908196 | None:intergenic | 55.0% | |
| GGCTGAGATACCAACCTCTC+GGG | + | chr1_3:61908188-61908207 | None:intergenic | 55.0% | |
| TGCAGCTGTACCCATGGTAG+AGG | - | chr1_3:61908566-61908585 | Msa0131190:intron | 55.0% | |
| TGTACCCATGGTAGAGGCCA+TGG | - | chr1_3:61908572-61908591 | Msa0131190:intron | 55.0% | |
| GCTACCATGGCCTCTACCAT+GGG | + | chr1_3:61908579-61908598 | None:intergenic | 55.0% | |
| AGCTACCATGGCCTCTACCA+TGG | + | chr1_3:61908580-61908599 | None:intergenic | 55.0% | |
| GGTAGAGGCCATGGTAGCTT+TGG | - | chr1_3:61908581-61908600 | Msa0131190:intron | 55.0% | |
| GGTTCGGGAAGGAGTGAGGA+AGG | + | chr1_3:61900500-61900519 | None:intergenic | 60.0% | |
| GGAGGAGAGGGATCGGAGAT+TGG | + | chr1_3:61900554-61900573 | None:intergenic | 60.0% | |
| GGTAGACGGAGGAGAGGGAT+CGG | + | chr1_3:61900561-61900580 | None:intergenic | 60.0% | |
| ACGGAGGTAGACGGAGGAGA+GGG | + | chr1_3:61900566-61900585 | None:intergenic | 60.0% | |
| ! | CGGGCAGCTGGGAGTACATA+TGG | - | chr1_3:61901342-61901361 | Msa0131190:intron | 60.0% |
| TCTGCAACCTCCCTGCCGAA+AGG | - | chr1_3:61902452-61902471 | Msa0131190:intron | 60.0% | |
| GGAAATGGGAGCCTTTCGGC+AGG | + | chr1_3:61902466-61902485 | None:intergenic | 60.0% | |
| GAGGGGATGGGTAGCTCACT+TGG | + | chr1_3:61903879-61903898 | None:intergenic | 60.0% | |
| CTACCCATCCCCTCCTCGTT+TGG | - | chr1_3:61903885-61903904 | Msa0131190:CDS | 60.0% | |
| CACACCAAACGAGGAGGGGA+TGG | + | chr1_3:61903892-61903911 | None:intergenic | 60.0% | |
| ! | CATCCCCTCCTCGTTTGGTG+TGG | - | chr1_3:61903890-61903909 | Msa0131190:CDS | 60.0% |
| AATAGTGGCCGATCGCGGTG+CGG | - | chr1_3:61905627-61905646 | Msa0131190:intron | 60.0% | |
| !!! | GTTTTTGGCCGCACCGCGAT+CGG | + | chr1_3:61905638-61905657 | None:intergenic | 60.0% |
| GATCGCGGTGCGGCCAAAAA+CGG | - | chr1_3:61905637-61905656 | Msa0131190:intron | 60.0% | |
| ! | CGCGGAGCGTTTGGAGAAAG+CGG | - | chr1_3:61905683-61905702 | Msa0131190:intron | 60.0% |
| CGGGCACTATTTCGGTGACG+GGG | + | chr1_3:61906291-61906310 | None:intergenic | 60.0% | |
| GCGGGCACTATTTCGGTGAC+GGG | + | chr1_3:61906292-61906311 | None:intergenic | 60.0% | |
| !! | GCGCGTAGCGGGCACTATTT+CGG | + | chr1_3:61906299-61906318 | None:intergenic | 60.0% |
| CCAAAAATTGACGCGGCGCG+GGG | + | chr1_3:61906327-61906346 | None:intergenic | 60.0% | |
| CCCAAAAATTGACGCGGCGC+GGG | + | chr1_3:61906328-61906347 | None:intergenic | 60.0% | |
| ! | CCCGCGCCGCGTCAATTTTT+GGG | - | chr1_3:61906325-61906344 | Msa0131190:intron | 60.0% |
| CCCCAAAAATTGACGCGGCG+CGG | + | chr1_3:61906329-61906348 | None:intergenic | 60.0% | |
| ! | CCGCGCCGCGTCAATTTTTG+GGG | - | chr1_3:61906326-61906345 | Msa0131190:intron | 60.0% |
| !! | CGCCGCGTCAATTTTTGGGG+TGG | - | chr1_3:61906329-61906348 | Msa0131190:intron | 60.0% |
| TGTGAAAACGGTGTGGGGGC+GGG | + | chr1_3:61907737-61907756 | None:intergenic | 60.0% | |
| GTGTGAAAACGGTGTGGGGG+CGG | + | chr1_3:61907738-61907757 | None:intergenic | 60.0% | |
| GATCCCTGTGTTGTCCCGAG+AGG | - | chr1_3:61908171-61908190 | Msa0131190:intron | 60.0% | |
| CCAACCTCTCGGGACAACAC+AGG | + | chr1_3:61908178-61908197 | None:intergenic | 60.0% | |
| CCTGTGTTGTCCCGAGAGGT+TGG | - | chr1_3:61908175-61908194 | Msa0131190:intron | 60.0% | |
| GACGGAGGTAGACGGAGGAG+AGG | + | chr1_3:61900567-61900586 | None:intergenic | 65.0% | |
| ACGAGGACGGAGGTAGACGG+AGG | + | chr1_3:61900572-61900591 | None:intergenic | 65.0% | |
| GGCGGTGTCTGCTGTCCGTA+AGG | - | chr1_3:61900948-61900967 | Msa0131190:intron | 65.0% | |
| GAGCAGAACTGCGAGGTCCC+GGG | + | chr1_3:61901019-61901038 | None:intergenic | 65.0% | |
| CGAGCAGAACTGCGAGGTCC+CGG | + | chr1_3:61901020-61901039 | None:intergenic | 65.0% | |
| ACCTCGCAGTTCTGCTCGCG+AGG | - | chr1_3:61901022-61901041 | Msa0131190:intron | 65.0% | |
| TCAGAGAGAGGGAGGCGAGG+AGG | + | chr1_3:61901438-61901457 | None:intergenic | 65.0% | |
| GCTTCAGAGAGAGGGAGGCG+AGG | + | chr1_3:61901441-61901460 | None:intergenic | 65.0% | |
| ATGGGAGCCTTTCGGCAGGG+AGG | + | chr1_3:61902462-61902481 | None:intergenic | 65.0% | |
| GGCTGAAGCGGGCGCAATTG+CGG | - | chr1_3:61905704-61905723 | Msa0131190:intron | 65.0% | |
| GCTGAAGCGGGCGCAATTGC+GGG | - | chr1_3:61905705-61905724 | Msa0131190:intron | 65.0% | |
| ! | CCCCGCGCCGCGTCAATTTT+TGG | - | chr1_3:61906324-61906343 | Msa0131190:intron | 65.0% |
| GCCTCGCGAGCAGAACTGCG+AGG | + | chr1_3:61901026-61901045 | None:intergenic | 70.0% | |
| CGCAACGCAGCGCTCCAACG+CGG | - | chr1_3:61905665-61905684 | Msa0131190:intron | 70.0% | |
| ! | GCGCTCCAACGCGGAGCGTT+TGG | - | chr1_3:61905674-61905693 | Msa0131190:intron | 70.0% |
| GGGCGCGATGCGGGTCAAAG+CGG | - | chr1_3:61905736-61905755 | Msa0131190:intron | 70.0% | |
| GGCGCGATGCGGGTCAAAGC+GGG | - | chr1_3:61905737-61905756 | Msa0131190:intron | 70.0% | |
| AATTGACGCGGCGCGGGGTG+CGG | + | chr1_3:61906322-61906341 | None:intergenic | 70.0% | |
| AGCGGAAATGCGGCGCGACG+CGG | + | chr1_3:61906355-61906374 | None:intergenic | 70.0% | |
| ATTGACGCGGCGCGGGGTGC+GGG | + | chr1_3:61906321-61906340 | None:intergenic | 75.0% | |
| ! | GCGGGGTGCGGGCGCGTAGC+GGG | + | chr1_3:61906310-61906329 | None:intergenic | 85.0% |
| ! | CGCGGGGTGCGGGCGCGTAG+CGG | + | chr1_3:61906311-61906330 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 61900110 | 61909121 | 61900110 | ID=Msa0131190;Name=Msa0131190 |
| chr1_3 | mRNA | 61900110 | 61909121 | 61900110 | ID=Msa0131190-mRNA-1;Parent=Msa0131190;Name=Msa0131190-mRNA-1;_AED=0.08;_eAED=0.08;_QI=362|1|1|1|1|1|13|405|436 |
| chr1_3 | exon | 61900110 | 61900660 | 61900110 | ID=Msa0131190-mRNA-1:exon:20587;Parent=Msa0131190-mRNA-1 |
| chr1_3 | exon | 61901039 | 61901123 | 61901039 | ID=Msa0131190-mRNA-1:exon:20586;Parent=Msa0131190-mRNA-1 |
| chr1_3 | exon | 61901805 | 61901870 | 61901805 | ID=Msa0131190-mRNA-1:exon:20585;Parent=Msa0131190-mRNA-1 |
| chr1_3 | exon | 61901979 | 61902073 | 61901979 | ID=Msa0131190-mRNA-1:exon:20584;Parent=Msa0131190-mRNA-1 |
| chr1_3 | exon | 61902199 | 61902301 | 61902199 | ID=Msa0131190-mRNA-1:exon:20583;Parent=Msa0131190-mRNA-1 |
| chr1_3 | exon | 61903860 | 61903991 | 61903860 | ID=Msa0131190-mRNA-1:exon:20582;Parent=Msa0131190-mRNA-1 |
| chr1_3 | exon | 61905156 | 61905236 | 61905156 | ID=Msa0131190-mRNA-1:exon:20581;Parent=Msa0131190-mRNA-1 |
| chr1_3 | exon | 61906956 | 61907048 | 61906956 | ID=Msa0131190-mRNA-1:exon:20580;Parent=Msa0131190-mRNA-1 |
| chr1_3 | exon | 61907135 | 61907218 | 61907135 | ID=Msa0131190-mRNA-1:exon:20579;Parent=Msa0131190-mRNA-1 |
| chr1_3 | exon | 61907320 | 61907378 | 61907320 | ID=Msa0131190-mRNA-1:exon:20578;Parent=Msa0131190-mRNA-1 |
| chr1_3 | exon | 61907463 | 61907539 | 61907463 | ID=Msa0131190-mRNA-1:exon:20577;Parent=Msa0131190-mRNA-1 |
| chr1_3 | exon | 61907744 | 61907894 | 61907744 | ID=Msa0131190-mRNA-1:exon:20576;Parent=Msa0131190-mRNA-1 |
| chr1_3 | exon | 61908621 | 61909121 | 61908621 | ID=Msa0131190-mRNA-1:exon:20575;Parent=Msa0131190-mRNA-1 |
| chr1_3 | five_prime_UTR | 61908760 | 61909121 | 61908760 | ID=Msa0131190-mRNA-1:five_prime_utr;Parent=Msa0131190-mRNA-1 |
| chr1_3 | CDS | 61908621 | 61908759 | 61908621 | ID=Msa0131190-mRNA-1:cds;Parent=Msa0131190-mRNA-1 |
| chr1_3 | CDS | 61907744 | 61907894 | 61907744 | ID=Msa0131190-mRNA-1:cds;Parent=Msa0131190-mRNA-1 |
| chr1_3 | CDS | 61907463 | 61907539 | 61907463 | ID=Msa0131190-mRNA-1:cds;Parent=Msa0131190-mRNA-1 |
| chr1_3 | CDS | 61907320 | 61907378 | 61907320 | ID=Msa0131190-mRNA-1:cds;Parent=Msa0131190-mRNA-1 |
| chr1_3 | CDS | 61907135 | 61907218 | 61907135 | ID=Msa0131190-mRNA-1:cds;Parent=Msa0131190-mRNA-1 |
| chr1_3 | CDS | 61906956 | 61907048 | 61906956 | ID=Msa0131190-mRNA-1:cds;Parent=Msa0131190-mRNA-1 |
| chr1_3 | CDS | 61905156 | 61905236 | 61905156 | ID=Msa0131190-mRNA-1:cds;Parent=Msa0131190-mRNA-1 |
| chr1_3 | CDS | 61903860 | 61903991 | 61903860 | ID=Msa0131190-mRNA-1:cds;Parent=Msa0131190-mRNA-1 |
| chr1_3 | CDS | 61902199 | 61902301 | 61902199 | ID=Msa0131190-mRNA-1:cds;Parent=Msa0131190-mRNA-1 |
| chr1_3 | CDS | 61901979 | 61902073 | 61901979 | ID=Msa0131190-mRNA-1:cds;Parent=Msa0131190-mRNA-1 |
| chr1_3 | CDS | 61901805 | 61901870 | 61901805 | ID=Msa0131190-mRNA-1:cds;Parent=Msa0131190-mRNA-1 |
| chr1_3 | CDS | 61901039 | 61901123 | 61901039 | ID=Msa0131190-mRNA-1:cds;Parent=Msa0131190-mRNA-1 |
| chr1_3 | CDS | 61900515 | 61900660 | 61900515 | ID=Msa0131190-mRNA-1:cds;Parent=Msa0131190-mRNA-1 |
| chr1_3 | three_prime_UTR | 61900110 | 61900514 | 61900110 | ID=Msa0131190-mRNA-1:three_prime_utr;Parent=Msa0131190-mRNA-1 |
| Gene Sequence |
| Protein sequence |
