AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0193630

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0193630 MtrunA17_Chr2g0283891 99.686 318 1 0 1 318 1 318 0.0 653
Msa0193630 MtrunA17_Chr4g0036951 26.891 238 164 4 47 274 99 336 3.06e-20 90.5
Msa0193630 MtrunA17_Chr4g0067151 26.047 215 154 5 96 309 67 277 2.36e-19 87.0
Msa0193630 MtrunA17_Chr4g0067151 24.000 275 195 10 45 314 61 326 1.90e-12 67.0
Msa0193630 MtrunA17_Chr4g0052291 23.411 299 187 6 54 310 105 403 7.31e-19 86.7
Msa0193630 MtrunA17_Chr4g0052291 24.571 175 117 2 64 223 230 404 1.05e-11 65.5
Msa0193630 MtrunA17_Chr6g0448921 27.670 206 141 6 61 266 59 256 2.79e-17 82.4
Msa0193630 MtrunA17_Chr2g0281451 28.436 211 143 7 100 309 8 211 3.79e-17 82.4
Msa0193630 MtrunA17_Chr1g0185501 29.412 187 126 5 125 309 86 268 6.11e-17 80.1
Msa0193630 MtrunA17_Chr7g0266251 33.333 180 103 7 100 265 9 185 6.93e-17 80.1
Msa0193630 MtrunA17_Chr2g0331981 30.000 190 125 6 78 265 73 256 1.93e-16 80.1
Msa0193630 MtrunA17_Chr5g0401661 29.670 182 113 7 97 269 510 685 3.17e-16 79.3
Msa0193630 MtrunA17_Chr4g0004241 29.474 190 126 6 78 265 73 256 6.36e-16 78.6
Msa0193630 MtrunA17_Chr4g0053651 29.121 182 114 7 97 269 403 578 1.68e-15 77.0
Msa0193630 MtrunA17_Chr8g0377441 28.022 182 112 6 99 267 216 391 1.89e-15 76.6
Msa0193630 MtrunA17_Chr3g0136971 28.700 223 126 9 72 267 358 574 2.61e-15 76.6
Msa0193630 MtrunA17_Chr5g0447911 26.667 225 153 3 62 277 252 473 9.19e-15 74.7
Msa0193630 MtrunA17_Chr5g0447911 27.811 169 115 1 106 267 250 418 1.67e-11 64.7
Msa0193630 MtrunA17_Chr1g0171711 27.193 228 153 8 83 310 572 786 1.05e-14 74.7
Msa0193630 MtrunA17_Chr5g0401671 27.222 180 116 7 99 269 422 595 1.15e-14 74.7
Msa0193630 MtrunA17_Chr3g0093681 24.638 276 149 9 84 313 294 556 1.22e-14 74.3
Msa0193630 MtrunA17_Chr1g0172501 25.664 226 159 7 84 309 294 510 1.83e-14 73.9
Msa0193630 MtrunA17_Chr1g0172501 27.160 162 110 5 106 265 397 552 7.29e-11 63.2
Msa0193630 MtrunA17_Chr7g0253861 29.452 146 99 4 122 267 112 253 2.70e-14 72.8
Msa0193630 MtrunA17_Chr7g0253861 27.570 214 136 9 62 266 99 302 8.58e-11 62.4
Msa0193630 MtrunA17_Chr5g0405851 26.613 248 155 10 41 273 137 372 8.86e-14 71.6
Msa0193630 MtrunA17_Chr5g0396821 30.323 155 105 2 113 267 776 927 1.14e-13 72.0
Msa0193630 MtrunA17_Chr3g0127991 27.568 185 127 4 112 292 138 319 1.23e-12 67.8
Msa0193630 MtrunA17_Chr2g0317491 27.053 207 140 5 109 309 616 817 2.29e-12 67.8
Msa0193630 MtrunA17_Chr8g0347471 23.448 290 173 10 60 310 649 928 4.59e-12 67.0
Msa0193630 MtrunA17_Chr5g0406931 30.319 188 105 9 99 269 203 381 4.60e-12 66.6
Msa0193630 MtrunA17_Chr4g0059031 26.582 237 154 9 85 309 383 611 1.14e-11 65.9
Msa0193630 MtrunA17_Chr3g0143791 21.014 276 194 7 10 265 9 280 4.48e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0193630 AT1G29260.1 81.191 319 57 2 1 318 1 317 0.0 558
Msa0193630 AT4G35050.1 26.809 235 159 4 46 267 101 335 1.37e-20 92.0
Msa0193630 AT5G58230.1 23.000 300 189 6 53 310 104 403 6.38e-20 90.1
Msa0193630 AT5G58230.1 24.000 175 118 2 64 223 230 404 1.23e-11 65.5
Msa0193630 AT3G49660.1 26.050 238 169 6 76 310 38 271 2.14e-19 87.4
Msa0193630 AT2G16780.1 24.153 236 166 3 45 267 99 334 1.12e-17 83.6
Msa0193630 AT2G16780.1 21.888 233 153 6 10 223 171 393 1.94e-11 64.7
Msa0193630 AT2G26060.1 35.519 183 96 9 100 265 13 190 1.09e-16 80.1
Msa0193630 AT2G26060.2 35.519 183 96 9 100 265 13 190 1.31e-16 79.7
Msa0193630 AT5G08390.1 25.926 216 152 6 51 266 49 256 1.42e-16 80.9
Msa0193630 AT5G23430.3 25.926 216 152 6 51 266 49 256 1.92e-16 80.5
Msa0193630 AT5G23430.2 25.926 216 152 6 51 266 49 256 1.92e-16 80.5
Msa0193630 AT5G23430.1 25.926 216 152 6 51 266 49 256 1.99e-16 80.5
Msa0193630 AT2G05720.1 28.054 221 128 7 75 290 76 270 3.14e-16 77.8
Msa0193630 AT3G15980.5 30.000 190 125 6 78 265 73 256 4.28e-16 79.7
Msa0193630 AT3G15980.3 30.000 190 125 6 78 265 73 256 4.34e-16 79.3
Msa0193630 AT3G15980.6 30.000 190 125 6 78 265 73 256 4.34e-16 79.3
Msa0193630 AT3G15980.2 30.000 190 125 6 78 265 73 256 4.34e-16 79.3
Msa0193630 AT3G15980.4 30.000 190 125 6 78 265 73 256 4.34e-16 79.3
Msa0193630 AT3G15980.7 30.000 190 125 6 78 265 73 256 4.50e-16 79.3
Msa0193630 AT3G15980.1 30.000 190 125 6 78 265 73 256 4.57e-16 79.3
Msa0193630 AT5G67320.1 29.670 182 113 7 97 269 438 613 9.22e-16 78.2
Msa0193630 AT1G52360.4 29.474 190 126 6 78 265 73 256 9.26e-16 78.6
Msa0193630 AT1G52360.1 29.474 190 126 6 78 265 73 256 9.26e-16 78.6
Msa0193630 AT1G52360.2 29.474 190 126 6 78 265 117 300 1.26e-15 78.2
Msa0193630 AT1G52360.3 29.474 190 126 6 78 265 73 256 1.26e-15 78.2
Msa0193630 AT1G79990.1 30.000 190 125 6 78 265 73 256 1.95e-15 77.4
Msa0193630 AT1G79990.2 30.000 190 125 6 78 265 73 256 2.09e-15 77.4
Msa0193630 AT5G25150.1 28.626 262 154 11 72 309 361 613 4.32e-15 76.3
Msa0193630 AT5G25150.2 28.626 262 154 11 72 309 361 613 4.73e-15 76.3
Msa0193630 AT2G19540.1 27.374 179 117 4 99 267 215 390 9.24e-15 75.1
Msa0193630 AT1G61210.3 26.190 210 149 6 100 309 8 211 1.53e-14 75.1
Msa0193630 AT1G61210.3 25.500 200 140 6 71 269 67 258 1.05e-13 72.4
Msa0193630 AT1G61210.1 26.190 210 149 6 100 309 8 211 2.22e-14 74.3
Msa0193630 AT1G61210.1 25.500 200 140 6 71 269 67 258 1.72e-13 71.6
Msa0193630 AT1G61210.2 26.190 210 149 6 100 309 8 211 2.26e-14 74.3
Msa0193630 AT1G61210.2 25.500 200 140 6 71 269 67 258 1.87e-13 71.6
Msa0193630 AT4G18900.1 30.952 168 110 1 106 267 232 399 5.19e-14 72.8
Msa0193630 AT4G18900.1 27.803 223 148 5 64 277 236 454 5.64e-14 72.8
Msa0193630 AT2G43770.1 30.822 146 97 4 122 267 110 251 7.82e-14 71.6
Msa0193630 AT2G43770.1 27.570 214 136 9 62 266 97 300 4.19e-11 63.5
Msa0193630 AT1G11160.4 24.623 199 141 6 72 269 68 258 2.12e-13 71.2
Msa0193630 AT1G11160.1 24.623 199 141 6 72 269 68 258 2.19e-13 71.2
Msa0193630 AT1G11160.3 24.623 199 141 6 72 269 26 216 2.26e-13 71.2
Msa0193630 AT1G11160.2 24.623 199 141 6 72 269 68 258 2.37e-13 71.2
Msa0193630 AT2G32950.2 27.602 221 147 6 90 309 296 504 3.07e-13 70.5
Msa0193630 AT2G32950.1 27.602 221 147 6 90 309 409 617 4.16e-13 70.5
Msa0193630 AT4G11110.1 25.571 219 143 5 59 267 721 929 8.61e-13 69.7
Msa0193630 AT2G46340.1 27.184 206 135 5 113 309 771 970 1.43e-12 68.9
Msa0193630 AT2G46340.2 27.184 206 135 5 113 309 771 970 1.43e-12 68.9
Msa0193630 AT4G18905.1 26.754 228 151 5 62 277 266 489 1.84e-12 68.2
Msa0193630 AT4G02730.1 25.595 168 119 6 100 266 36 198 1.95e-12 67.4
Msa0193630 AT4G18905.2 26.754 228 151 5 62 277 276 499 2.10e-12 68.2
Msa0193630 AT4G35370.1 26.455 189 135 2 83 267 189 377 3.79e-12 67.0
Msa0193630 AT4G35370.1 27.461 193 134 3 64 253 219 408 1.44e-11 65.5
Msa0193630 AT5G24520.4 28.144 167 114 3 105 267 130 294 5.47e-12 66.2
Msa0193630 AT5G24520.2 28.144 167 114 3 105 267 130 294 5.47e-12 66.2
Msa0193630 AT5G24520.1 28.144 167 114 3 105 267 130 294 5.47e-12 66.2
Msa0193630 AT5G24520.3 28.144 167 114 3 105 267 130 294 5.47e-12 66.2
Msa0193630 AT3G16650.1 29.213 178 117 7 82 259 190 358 2.17e-11 64.7
Msa0193630 AT1G20540.1 26.087 184 128 5 87 265 100 280 2.59e-11 64.3
Msa0193630 AT3G15354.4 25.728 206 144 4 109 309 335 536 5.10e-11 63.9
Msa0193630 AT3G15354.5 25.728 206 144 4 109 309 335 536 5.10e-11 63.9
Msa0193630 AT3G15354.3 25.728 206 144 4 109 309 585 786 7.33e-11 63.5
Msa0193630 AT4G15900.1 24.561 228 161 7 82 309 196 412 7.40e-11 63.2
Msa0193630 AT5G13480.2 27.972 143 100 3 123 265 233 372 8.47e-11 63.2
Msa0193630 AT5G13480.1 27.972 143 100 3 123 265 222 361 9.05e-11 63.2
Msa0193630 AT5G13480.4 27.972 143 100 3 123 265 210 349 9.73e-11 63.2
Msa0193630 AT5G13480.3 27.972 143 100 3 123 265 210 349 9.81e-11 63.2

Find 109 sgRNAs with CRISPR-Local

Find 208 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGGATTGTACTGTCAGAATT+TGG 0.134510 2_1:+9462567 Msa0193630:CDS
GTTCCGGTTGCCGTGCTTAA+TGG 0.204077 2_1:+9463494 Msa0193630:CDS
AAATCATCTTGTACTGAATC+TGG 0.271979 2_1:+9461951 Msa0193630:five_prime_UTR
TTTGGGATGTAAGGAGTTAT+AGG 0.273478 2_1:+9463471 Msa0193630:CDS
GGGACGATACCGTCAAATTA+TGG 0.291682 2_1:+9462438 Msa0193630:CDS
TTCCGGTTGCCGTGCTTAAT+GGG 0.295179 2_1:+9463495 Msa0193630:CDS
ATGATATGACTGTTTGTGTT+TGG 0.299620 2_1:+9463585 Msa0193630:CDS
TGCTCTGACAGTGAGTATTT+TGG 0.301681 2_1:+9464746 Msa0193630:three_prime_UTR
GTTGTTGAAACTTTCATAAT+GGG 0.301834 2_1:+9464507 Msa0193630:three_prime_UTR
GGTTGTTGAAACTTTCATAA+TGG 0.304144 2_1:+9464506 Msa0193630:three_prime_UTR
ATTGTGTTTATTCATCTGTT+TGG 0.320363 2_1:+9462507 Msa0193630:CDS
AACTTTAGATGGAACCTAAA+AGG 0.329299 2_1:+9464477 Msa0193630:intron
TTGGGATGTAAGGAGTTATA+GGG 0.332484 2_1:+9463472 Msa0193630:CDS
TGATATGACTGTTTGTGTTT+GGG 0.333313 2_1:+9463586 Msa0193630:CDS
AGATTCAGTACAAGATGATT+TGG 0.352069 2_1:-9461949 None:intergenic
CAGTTAAGGTTTGGGATGTA+AGG 0.354149 2_1:+9463462 Msa0193630:CDS
TTGATAAGTCAGTTAAGGTT+TGG 0.355478 2_1:+9463453 Msa0193630:CDS
TTGTGTAAGTTTAAATTGTT+TGG 0.356964 2_1:+9464630 Msa0193630:three_prime_UTR
TAGGCGGCGATTTCGGTGAT+TGG 0.373569 2_1:-9462206 None:intergenic
TGATAAGTCAGTTAAGGTTT+GGG 0.383380 2_1:+9463454 Msa0193630:CDS
TTTGAAAACTGGCATCGTTT+TGG 0.384636 2_1:-9462048 None:intergenic
ATCATACTGAGTTTGCTGTT+GGG 0.389414 2_1:+9463648 Msa0193630:CDS
TGTTCATGAAAGGAACGAAT+AGG 0.390721 2_1:-9462350 None:intergenic
GGGATGAACTTGTTTATGTT+TGG 0.393483 2_1:+9463717 Msa0193630:CDS
GGTGATTGGGAGAGTGGGGT+TGG 0.394635 2_1:-9462192 None:intergenic
GATGAATGTATAATTGCAAC+TGG 0.406242 2_1:+9463425 Msa0193630:CDS
TGTAAGGAGTTATAGGGTTC+CGG 0.408160 2_1:+9463478 Msa0193630:CDS
GCTTCTTGCTAGTACTGGTT+GGG 0.412462 2_1:+9463697 Msa0193630:CDS
ATGAGATTCTTTCGTGCGAT+TGG 0.420567 2_1:+9463393 Msa0193630:CDS
GATATGAGTGTTCTTGTTGA+AGG 0.426691 2_1:+9463674 Msa0193630:CDS
TGACGGAGTAACCGTTGAAT+GGG 0.426922 2_1:-9462073 None:intergenic
TGCCCATTAAGCACGGCAAC+CGG 0.427081 2_1:-9463497 None:intergenic
GTCGGTTGATAAGTCAGTTA+AGG 0.429070 2_1:+9463448 Msa0193630:CDS
GGCTTCTTGCTAGTACTGGT+TGG 0.432245 2_1:+9463696 Msa0193630:CDS
AGAAACGAATCACGGCGAAC+AGG 0.432589 2_1:-9462404 None:intergenic
TTGACGGAGTAACCGTTGAA+TGG 0.442266 2_1:-9462074 None:intergenic
GGATTGTACTGTCAGAATTT+GGG 0.443764 2_1:+9462568 Msa0193630:CDS
GAAGGGCTTCTTGCTAGTAC+TGG 0.444363 2_1:+9463692 Msa0193630:CDS
ATTTCGGTGATTGGGAGAGT+GGG 0.454712 2_1:-9462197 None:intergenic
GATTGGGAGAGTGGGGTTGG+AGG 0.460624 2_1:-9462189 None:intergenic
CTTGTTTATGTTTGGCAACA+TGG 0.461447 2_1:+9463725 Msa0193630:CDS
GGTGTCGTAGGCGGCGATTT+CGG 0.462174 2_1:-9462213 None:intergenic
GTTCATGAAAGGAACGAATA+GGG 0.469484 2_1:-9462349 None:intergenic
GTAGAAGGGGCTGAATTTGA+CGG 0.470246 2_1:-9462090 None:intergenic
TAGGTGGAAGAGTGAGTGTT+AGG 0.471925 2_1:-9462024 None:intergenic
CATCATACTGAGTTTGCTGT+TGG 0.478915 2_1:+9463647 Msa0193630:CDS
AGGCGGCGATTTCGGTGATT+GGG 0.479284 2_1:-9462205 None:intergenic
TGGAGGAGAGTTCGAGGACG+TGG 0.479460 2_1:-9462172 None:intergenic
GGCAACGGCGGCGACGGTAA+TGG 0.482055 2_1:-9462279 None:intergenic
ACCGTCGCCGCCGTTGCCGA+TGG 0.484087 2_1:+9462284 Msa0193630:CDS
ATTTGGGATGTTCGTGAACC+AGG 0.485985 2_1:+9462584 Msa0193630:CDS
TCATACTGAGTTTGCTGTTG+GGG 0.495869 2_1:+9463649 Msa0193630:CDS
TGGGGTTGGAGGAGAGTTCG+AGG 0.501933 2_1:-9462178 None:intergenic
CAAGTGCAAGACAATGAAGT+TGG 0.504929 2_1:+9464537 Msa0193630:three_prime_UTR
AATCATCTTGTACTGAATCT+GGG 0.505519 2_1:+9461952 Msa0193630:five_prime_UTR
TGATCCTAGGGCATCTTGAA+AGG 0.509067 2_1:+9463751 Msa0193630:exon
ATATGAGTGTTCTTGTTGAA+GGG 0.514929 2_1:+9463675 Msa0193630:CDS
AGGTTCTACAATGATTCTTC+CGG 0.515402 2_1:+9463361 Msa0193630:intron
GCCGCATGTGAGGAATTTGT+TGG 0.515565 2_1:+9463550 Msa0193630:CDS
GCATGGTTATGCTGTTAGAA+AGG 0.517131 2_1:+9463517 Msa0193630:CDS
GATGCCGTCGGCGGTGTCGT+AGG 0.517224 2_1:-9462225 None:intergenic
ATGGAACCTAAAAGGAAGAA+TGG 0.517562 2_1:+9464485 Msa0193630:three_prime_UTR
GGCAACATGGAACTGATCCT+AGG 0.522032 2_1:+9463738 Msa0193630:CDS
TTGAACGTTCTCACCGAAGT+GGG 0.523846 2_1:-9462473 None:intergenic
GATTTCGGTGATTGGGAGAG+TGG 0.524323 2_1:-9462198 None:intergenic
ACCATCGGCAACGGCGGCGA+CGG 0.530414 2_1:-9462285 None:intergenic
AATAGTAGAGCATTCAGTAC+TGG 0.531259 2_1:-9464607 None:intergenic
GATCCTAGGGCATCTTGAAA+GGG 0.532838 2_1:+9463752 Msa0193630:exon
CTTCCCTTTCAAGATGCCCT+AGG 0.540302 2_1:-9463755 None:intergenic
GTCGCCACCGCTCAAAACTT+CGG 0.541735 2_1:+9462128 Msa0193630:CDS
GTTGCCGTGCTTAATGGGCA+TGG 0.541849 2_1:+9463500 Msa0193630:CDS
ATCCACGGTCCATAATTTGA+CGG 0.542435 2_1:-9462447 None:intergenic
AACTTCGGCATCCTCGGCAA+CGG 0.545359 2_1:+9462143 Msa0193630:CDS
AGAATCTCATGTTCATGTGC+CGG 0.550681 2_1:-9463380 None:intergenic
TTCGTTTCTCTCCGCTGCGT+GGG 0.552872 2_1:+9462418 Msa0193630:CDS
GCTCAAAACTTCGGCATCCT+CGG 0.554172 2_1:+9462137 Msa0193630:CDS
AGCGAGGTCGTAGAGTTTGA+CGG 0.554977 2_1:-9462309 None:intergenic
GTAGAGTTTGACGGAACCAT+CGG 0.556953 2_1:-9462300 None:intergenic
CGAATAGGGTTTGAAGTAGG+TGG 0.559454 2_1:-9462335 None:intergenic
ATTCGTTTCTCTCCGCTGCG+TGG 0.561476 2_1:+9462417 Msa0193630:CDS
CACCGAAGTGGGACGATCCA+CGG 0.563775 2_1:-9462462 None:intergenic
GCAACATGGAACTGATCCTA+GGG 0.574620 2_1:+9463739 Msa0193630:CDS
CGTGGAGACGGCCGTTGCCG+AGG 0.577422 2_1:-9462154 None:intergenic
GACGGAACCATCGGCAACGG+CGG 0.578656 2_1:-9462291 None:intergenic
AGAGTTCGAGGACGTGGAGA+CGG 0.581734 2_1:-9462166 None:intergenic
GAGCGGTGGCGACGGCGATG+CGG 0.585400 2_1:-9462118 None:intergenic
GCCGCCTACGACACCGCCGA+CGG 0.585566 2_1:+9462221 Msa0193630:CDS
ATCATCTTGTACTGAATCTG+GGG 0.588651 2_1:+9461953 Msa0193630:five_prime_UTR
GCCGTCGGCGGTGTCGTAGG+CGG 0.589550 2_1:-9462222 None:intergenic
TTCACGTGTATGTTCATGAA+AGG 0.590355 2_1:-9462360 None:intergenic
GACCGTGGATCGTCCCACTT+CGG 0.593212 2_1:+9462460 Msa0193630:CDS
TTTGAACGTTCTCACCGAAG+TGG 0.595208 2_1:-9462474 None:intergenic
TTTCGGTGATTGGGAGAGTG+GGG 0.608168 2_1:-9462196 None:intergenic
TTTGACGGAACCATCGGCAA+CGG 0.611477 2_1:-9462294 None:intergenic
GAACGAATAGGGTTTGAAGT+AGG 0.614418 2_1:-9462338 None:intergenic
CTAGGGCATCTTGAAAGGGA+AGG 0.630519 2_1:+9463756 Msa0193630:exon
ATAACCATGCCCATTAAGCA+CGG 0.633480 2_1:-9463504 None:intergenic
GACGGAGTAACCGTTGAATG+GGG 0.634585 2_1:-9462072 None:intergenic
ACCAACAAATTCCTCACATG+CGG 0.642131 2_1:-9463551 None:intergenic
GACGGTATCGTCCCACGCAG+CGG 0.642717 2_1:-9462429 None:intergenic
ACGGCATCTACGACGTCACA+TGG 0.642993 2_1:+9462240 Msa0193630:CDS
CAGCGGAGAGAAACGAATCA+CGG 0.652885 2_1:-9462412 None:intergenic
TACCGTCAAATTATGGACCG+TGG 0.654878 2_1:+9462445 Msa0193630:CDS
TTGAAGTAGGTGGAAGAGCG+AGG 0.660138 2_1:-9462325 None:intergenic
GACGTCGTAGATGCCGTCGG+CGG 0.671920 2_1:-9462234 None:intergenic
TGTGACGTCGTAGATGCCGT+CGG 0.679756 2_1:-9462237 None:intergenic
ATGTATAATTGCAACTGGGT+CGG 0.683430 2_1:+9463430 Msa0193630:CDS
GCGAACAGGATTATAATCAA+CGG 0.693874 2_1:-9462390 None:intergenic
ATGAATGTATAATTGCAACT+GGG 0.763887 2_1:+9463426 Msa0193630:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTCATTTATATGATTAATTT+TGG + chr2_1:9464000-9464019 Msa0193630:intron 10.0%
!! AATTATAAATATAACCAATA+TGG - chr2_1:9464161-9464180 None:intergenic 10.0%
!! GTTATATTTATAATTTAGAA+GGG + chr2_1:9464166-9464185 Msa0193630:intron 10.0%
!! CACATATATAAAAAGAAAAA+GGG - chr2_1:9463811-9463830 None:intergenic 15.0%
!! GGTTATATTTATAATTTAGA+AGG + chr2_1:9464165-9464184 Msa0193630:intron 15.0%
!! TATATCAAAATTGTAATACC+TGG - chr2_1:9462605-9462624 None:intergenic 20.0%
!!! TTTTAGCTATAGTTAAGTTA+AGG + chr2_1:9462758-9462777 Msa0193630:intron 20.0%
!! AATCCATTAAAGCAAAATTA+GGG + chr2_1:9462842-9462861 Msa0193630:intron 20.0%
!!! ATAGTTCAACTAACTTTTAA+GGG - chr2_1:9462963-9462982 None:intergenic 20.0%
!!! TATAGTTCAACTAACTTTTA+AGG - chr2_1:9462964-9462983 None:intergenic 20.0%
!!! AGAATATATTTTGACATGTT+TGG - chr2_1:9463178-9463197 None:intergenic 20.0%
!! ATTACTTAAAAACCTAGTAT+TGG - chr2_1:9463299-9463318 None:intergenic 20.0%
!! CCACATATATAAAAAGAAAA+AGG - chr2_1:9463812-9463831 None:intergenic 20.0%
!!! CCTTTTTCTTTTTATATATG+TGG + chr2_1:9463809-9463828 Msa0193630:intron 20.0%
!!! TTCTTTTTATATATGTGGTT+AGG + chr2_1:9463814-9463833 Msa0193630:intron 20.0%
!! CATGAATTCATTATTTATGA+TGG + chr2_1:9463961-9463980 Msa0193630:intron 20.0%
!! TAAATATAACCAATATGGTT+TGG - chr2_1:9464156-9464175 None:intergenic 20.0%
!! ATTTATAATTTAGAAGGGAT+CGG + chr2_1:9464171-9464190 Msa0193630:intron 20.0%
!! AAGAATAACATAAAAGAACT+AGG - chr2_1:9464419-9464438 None:intergenic 20.0%
!! TAACAATTTGAGCATAAAAA+AGG - chr2_1:9464455-9464474 None:intergenic 20.0%
!! AAATTGTTAAGAACTTTAGA+TGG + chr2_1:9464466-9464485 Msa0193630:intron 20.0%
!! TTGTGTAAGTTTAAATTGTT+TGG + chr2_1:9464630-9464649 Msa0193630:three_prime_UTR 20.0%
! ATTGTGTTTATTCATCTGTT+TGG + chr2_1:9462507-9462526 Msa0193630:CDS 25.0%
!! TCTAAGTGTATGTTTCATTT+TGG + chr2_1:9462688-9462707 Msa0193630:intron 25.0%
! GAATCCATTAAAGCAAAATT+AGG + chr2_1:9462841-9462860 Msa0193630:intron 25.0%
! ATCCATTAAAGCAAAATTAG+GGG + chr2_1:9462843-9462862 Msa0193630:intron 25.0%
!!! AGAATTGATTTTGACATGTT+TGG - chr2_1:9463085-9463104 None:intergenic 25.0%
! TACTTAAATTAGTGTATGTC+TGG - chr2_1:9463240-9463259 None:intergenic 25.0%
! TAACTATTACATCCAATACT+AGG + chr2_1:9463284-9463303 Msa0193630:intron 25.0%
! TATCTATTACATCTAATACC+AGG + chr2_1:9463341-9463360 Msa0193630:intron 25.0%
! ATGAATGTATAATTGCAACT+GGG + chr2_1:9463426-9463445 Msa0193630:CDS 25.0%
! TTTATAATTTAGAAGGGATC+GGG + chr2_1:9464172-9464191 Msa0193630:intron 25.0%
! GTTGTTGAAACTTTCATAAT+GGG + chr2_1:9464507-9464526 Msa0193630:three_prime_UTR 25.0%
!!! TTGGATTTTGTTTGTAACAT+GGG + chr2_1:9464556-9464575 Msa0193630:three_prime_UTR 25.0%
!! GTTGAAATATTTTGTGTATC+TGG - chr2_1:9464717-9464736 None:intergenic 25.0%
AGATTCAGTACAAGATGATT+TGG - chr2_1:9461952-9461971 None:intergenic 30.0%
AAATCATCTTGTACTGAATC+TGG + chr2_1:9461951-9461970 Msa0193630:five_prime_UTR 30.0%
AATCATCTTGTACTGAATCT+GGG + chr2_1:9461952-9461971 Msa0193630:five_prime_UTR 30.0%
TGTAAAAATGAGCTGAACAT+CGG + chr2_1:9462799-9462818 Msa0193630:intron 30.0%
! TACCCCTAATTTTGCTTTAA+TGG - chr2_1:9462848-9462867 None:intergenic 30.0%
!! ATACGGGTTAGAATTGATTA+TGG - chr2_1:9463114-9463133 None:intergenic 30.0%
AAGTAGAATCAGTGTAAGTT+TGG - chr2_1:9463147-9463166 None:intergenic 30.0%
!! TTACACTGATTCTACTTTAG+AGG + chr2_1:9463150-9463169 Msa0193630:intron 30.0%
!!! AATTTTGACTCTTCCAAAAG+TGG + chr2_1:9463212-9463231 Msa0193630:intron 30.0%
GATGAATGTATAATTGCAAC+TGG + chr2_1:9463425-9463444 Msa0193630:CDS 30.0%
TTGATAAGTCAGTTAAGGTT+TGG + chr2_1:9463453-9463472 Msa0193630:CDS 30.0%
TGATAAGTCAGTTAAGGTTT+GGG + chr2_1:9463454-9463473 Msa0193630:CDS 30.0%
ATGATATGACTGTTTGTGTT+TGG + chr2_1:9463585-9463604 Msa0193630:CDS 30.0%
TGATATGACTGTTTGTGTTT+GGG + chr2_1:9463586-9463605 Msa0193630:CDS 30.0%
!! TGTTTGTGTTTGGGATTTTA+TGG + chr2_1:9463595-9463614 Msa0193630:CDS 30.0%
ATATGAGTGTTCTTGTTGAA+GGG + chr2_1:9463675-9463694 Msa0193630:CDS 30.0%
CATTGATACAACAAGACTAT+TGG - chr2_1:9463862-9463881 None:intergenic 30.0%
AATACATCTCTTTCATTGAC+TGG + chr2_1:9463910-9463929 Msa0193630:intron 30.0%
CGATTCATTAAGCAACAAAA+TGG - chr2_1:9464029-9464048 None:intergenic 30.0%
!!! GTTTTTTTGCATTACGTTGT+TGG + chr2_1:9464111-9464130 Msa0193630:intron 30.0%
CTGATACTATACAAATCTCA+AGG - chr2_1:9464282-9464301 None:intergenic 30.0%
TAGAAGACCAATGTTAATAG+AGG - chr2_1:9464387-9464406 None:intergenic 30.0%
AACTTTAGATGGAACCTAAA+AGG + chr2_1:9464477-9464496 Msa0193630:intron 30.0%
GGTTGTTGAAACTTTCATAA+TGG + chr2_1:9464506-9464525 Msa0193630:three_prime_UTR 30.0%
!! GTTGGATTTTGTTTGTAACA+TGG + chr2_1:9464555-9464574 Msa0193630:three_prime_UTR 30.0%
ATCATCTTGTACTGAATCTG+GGG + chr2_1:9461953-9461972 Msa0193630:five_prime_UTR 35.0%
! TTTGAAAACTGGCATCGTTT+TGG - chr2_1:9462051-9462070 None:intergenic 35.0%
!!! TTGAATGGGGTTTTGAAAAC+TGG - chr2_1:9462062-9462081 None:intergenic 35.0%
! GTTTTCAAAACCCCATTCAA+CGG + chr2_1:9462062-9462081 Msa0193630:CDS 35.0%
GTTCATGAAAGGAACGAATA+GGG - chr2_1:9462352-9462371 None:intergenic 35.0%
TGTTCATGAAAGGAACGAAT+AGG - chr2_1:9462353-9462372 None:intergenic 35.0%
TTCACGTGTATGTTCATGAA+AGG - chr2_1:9462363-9462382 None:intergenic 35.0%
GCGAACAGGATTATAATCAA+CGG - chr2_1:9462393-9462412 None:intergenic 35.0%
GGATTGTACTGTCAGAATTT+GGG + chr2_1:9462568-9462587 Msa0193630:CDS 35.0%
! TGTGACTAAAAGTGAGTTGA+AGG + chr2_1:9462911-9462930 Msa0193630:intron 35.0%
GCTTCAAGCAGAATCAATTA+TGG + chr2_1:9463031-9463050 Msa0193630:intron 35.0%
TCAAGCAGAATCAATTATGG+AGG + chr2_1:9463034-9463053 Msa0193630:intron 35.0%
GGGTTAGAATTGATTATGGA+GGG - chr2_1:9463110-9463129 None:intergenic 35.0%
AATTCTAACCCGTATAGAAG+TGG + chr2_1:9463119-9463138 Msa0193630:intron 35.0%
! AGTTTGGTTCCACTTCTATA+CGG - chr2_1:9463131-9463150 None:intergenic 35.0%
AGGTTCTACAATGATTCTTC+CGG + chr2_1:9463361-9463380 Msa0193630:intron 35.0%
ATGTATAATTGCAACTGGGT+CGG + chr2_1:9463430-9463449 Msa0193630:CDS 35.0%
! TTTGGGATGTAAGGAGTTAT+AGG + chr2_1:9463471-9463490 Msa0193630:CDS 35.0%
TTGGGATGTAAGGAGTTATA+GGG + chr2_1:9463472-9463491 Msa0193630:CDS 35.0%
!! TTGTGTTTGGGATTTTATGG+TGG + chr2_1:9463598-9463617 Msa0193630:CDS 35.0%
!! TTTTATGGTGGAAGATGCTT+TGG + chr2_1:9463610-9463629 Msa0193630:CDS 35.0%
!! ATCATACTGAGTTTGCTGTT+GGG + chr2_1:9463648-9463667 Msa0193630:CDS 35.0%
GATATGAGTGTTCTTGTTGA+AGG + chr2_1:9463674-9463693 Msa0193630:CDS 35.0%
! GGGATGAACTTGTTTATGTT+TGG + chr2_1:9463717-9463736 Msa0193630:CDS 35.0%
CTTGTTTATGTTTGGCAACA+TGG + chr2_1:9463725-9463744 Msa0193630:CDS 35.0%
ATATATGTGGTTAGGATGAG+AGG + chr2_1:9463822-9463841 Msa0193630:intron 35.0%
! GTCTTGTTGTATCAATGTTG+AGG + chr2_1:9463865-9463884 Msa0193630:intron 35.0%
TTTGGAAGACAGAAGTAATG+GGG - chr2_1:9464138-9464157 None:intergenic 35.0%
GTTTGGAAGACAGAAGTAAT+GGG - chr2_1:9464139-9464158 None:intergenic 35.0%
TTCTGTCTTCCAAACCATAT+TGG + chr2_1:9464144-9464163 Msa0193630:intron 35.0%
CCTCAGATAATGCACTAAAA+TGG - chr2_1:9464201-9464220 None:intergenic 35.0%
!! CCATTTTAGTGCATTATCTG+AGG + chr2_1:9464198-9464217 Msa0193630:intron 35.0%
TTAATAGAGGCAGAAACAGT+TGG - chr2_1:9464374-9464393 None:intergenic 35.0%
GTTTCTGCCTCTATTAACAT+TGG + chr2_1:9464377-9464396 Msa0193630:intron 35.0%
ATGGAACCTAAAAGGAAGAA+TGG + chr2_1:9464485-9464504 Msa0193630:three_prime_UTR 35.0%
! CAACAACCATTCTTCCTTTT+AGG - chr2_1:9464494-9464513 None:intergenic 35.0%
! AATAGTAGAGCATTCAGTAC+TGG - chr2_1:9464610-9464629 None:intergenic 35.0%
!!! AAACTGGCATCGTTTTGGTT+AGG - chr2_1:9462046-9462065 None:intergenic 40.0%
! GAACGAATAGGGTTTGAAGT+AGG - chr2_1:9462341-9462360 None:intergenic 40.0%
ATCCACGGTCCATAATTTGA+CGG - chr2_1:9462450-9462469 None:intergenic 40.0%
AGAAGCCGATGCAAAAACAT+CGG - chr2_1:9462546-9462565 None:intergenic 40.0%
!!! ATGTTTTTGCATCGGCTTCT+GGG + chr2_1:9462546-9462565 Msa0193630:CDS 40.0%
GGGATTGTACTGTCAGAATT+TGG + chr2_1:9462567-9462586 Msa0193630:CDS 40.0%
! TAGGGGTATGTTTGATTGTG+CGG + chr2_1:9462860-9462879 Msa0193630:intron 40.0%
! CGGGTTAGAATTGATTATGG+AGG - chr2_1:9463111-9463130 None:intergenic 40.0%
! GTTTGGTTCCACTTCTATAC+GGG - chr2_1:9463130-9463149 None:intergenic 40.0%
!! TGTATGTCTGGTTCCACTTT+TGG - chr2_1:9463228-9463247 None:intergenic 40.0%
GGAAGAATCATTGTAGAACC+TGG - chr2_1:9463362-9463381 None:intergenic 40.0%
AGAATCTCATGTTCATGTGC+CGG - chr2_1:9463383-9463402 None:intergenic 40.0%
ATGAGATTCTTTCGTGCGAT+TGG + chr2_1:9463393-9463412 Msa0193630:CDS 40.0%
!! GTCGGTTGATAAGTCAGTTA+AGG + chr2_1:9463448-9463467 Msa0193630:CDS 40.0%
! CAGTTAAGGTTTGGGATGTA+AGG + chr2_1:9463462-9463481 Msa0193630:CDS 40.0%
TGTAAGGAGTTATAGGGTTC+CGG + chr2_1:9463478-9463497 Msa0193630:CDS 40.0%
ATAACCATGCCCATTAAGCA+CGG - chr2_1:9463507-9463526 None:intergenic 40.0%
GCATGGTTATGCTGTTAGAA+AGG + chr2_1:9463517-9463536 Msa0193630:CDS 40.0%
! TTAAATTTTCGCCGCATGTG+AGG + chr2_1:9463540-9463559 Msa0193630:CDS 40.0%
ACCAACAAATTCCTCACATG+CGG - chr2_1:9463554-9463573 None:intergenic 40.0%
!! CATCATACTGAGTTTGCTGT+TGG + chr2_1:9463647-9463666 Msa0193630:CDS 40.0%
!! TCATACTGAGTTTGCTGTTG+GGG + chr2_1:9463649-9463668 Msa0193630:CDS 40.0%
!! AGGGAAGGTACTCAAAACTT+AGG + chr2_1:9463771-9463790 Msa0193630:intron 40.0%
GGTTAGGATGAGAGGAATAT+TGG + chr2_1:9463830-9463849 Msa0193630:intron 40.0%
GGTTTGGAAGACAGAAGTAA+TGG - chr2_1:9464140-9464159 None:intergenic 40.0%
! TCTGAGGAAAATTTTCAGCG+TGG + chr2_1:9464214-9464233 Msa0193630:intron 40.0%
! TTCCTAGTTCTTGTATGCGT+AGG + chr2_1:9464256-9464275 Msa0193630:intron 40.0%
TCACTGTTTACCTTCTTGAC+TGG + chr2_1:9464313-9464332 Msa0193630:intron 40.0%
CACTGTTTACCTTCTTGACT+GGG + chr2_1:9464314-9464333 Msa0193630:intron 40.0%
ACTGTTTACCTTCTTGACTG+GGG + chr2_1:9464315-9464334 Msa0193630:intron 40.0%
CAAGTGCAAGACAATGAAGT+TGG + chr2_1:9464537-9464556 Msa0193630:three_prime_UTR 40.0%
! TGCTCTGACAGTGAGTATTT+TGG + chr2_1:9464746-9464765 Msa0193630:three_prime_UTR 40.0%
TAGGTGGAAGAGTGAGTGTT+AGG - chr2_1:9462027-9462046 None:intergenic 45.0%
TGACGGAGTAACCGTTGAAT+GGG - chr2_1:9462076-9462095 None:intergenic 45.0%
TTGACGGAGTAACCGTTGAA+TGG - chr2_1:9462077-9462096 None:intergenic 45.0%
GTAGAAGGGGCTGAATTTGA+CGG - chr2_1:9462093-9462112 None:intergenic 45.0%
ATTTCGGTGATTGGGAGAGT+GGG - chr2_1:9462200-9462219 None:intergenic 45.0%
GTAGAGTTTGACGGAACCAT+CGG - chr2_1:9462303-9462322 None:intergenic 45.0%
! CGAATAGGGTTTGAAGTAGG+TGG - chr2_1:9462338-9462357 None:intergenic 45.0%
GGGACGATACCGTCAAATTA+TGG + chr2_1:9462438-9462457 Msa0193630:CDS 45.0%
TACCGTCAAATTATGGACCG+TGG + chr2_1:9462445-9462464 Msa0193630:CDS 45.0%
TTGAACGTTCTCACCGAAGT+GGG - chr2_1:9462476-9462495 None:intergenic 45.0%
TTTGAACGTTCTCACCGAAG+TGG - chr2_1:9462477-9462496 None:intergenic 45.0%
!! TCACGCCGATGTTTTTGCAT+CGG + chr2_1:9462538-9462557 Msa0193630:CDS 45.0%
!!! GATGTTTTTGCATCGGCTTC+TGG + chr2_1:9462545-9462564 Msa0193630:CDS 45.0%
!!! TGTTTTTGCATCGGCTTCTG+GGG + chr2_1:9462547-9462566 Msa0193630:CDS 45.0%
! ATTTGGGATGTTCGTGAACC+AGG + chr2_1:9462584-9462603 Msa0193630:CDS 45.0%
!! GCTTCTTGCTAGTACTGGTT+GGG + chr2_1:9463697-9463716 Msa0193630:CDS 45.0%
GCAACATGGAACTGATCCTA+GGG + chr2_1:9463739-9463758 Msa0193630:CDS 45.0%
! TGATCCTAGGGCATCTTGAA+AGG + chr2_1:9463751-9463770 Msa0193630:exon 45.0%
! GATCCTAGGGCATCTTGAAA+GGG + chr2_1:9463752-9463771 Msa0193630:exon 45.0%
CTGTTTACCTTCTTGACTGG+GGG + chr2_1:9464316-9464335 Msa0193630:intron 45.0%
TGTTTACCTTCTTGACTGGG+GGG + chr2_1:9464317-9464336 Msa0193630:intron 45.0%
!!! CTGGCATCGTTTTGGTTAGG+TGG - chr2_1:9462043-9462062 None:intergenic 50.0%
GACGGAGTAACCGTTGAATG+GGG - chr2_1:9462075-9462094 None:intergenic 50.0%
! CGATGCGGTTTTCGTAGAAG+GGG - chr2_1:9462106-9462125 None:intergenic 50.0%
! GCGATGCGGTTTTCGTAGAA+GGG - chr2_1:9462107-9462126 None:intergenic 50.0%
!!! GAGGATGCCGAAGTTTTGAG+CGG - chr2_1:9462138-9462157 None:intergenic 50.0%
GCTCAAAACTTCGGCATCCT+CGG + chr2_1:9462137-9462156 Msa0193630:CDS 50.0%
TTTCGGTGATTGGGAGAGTG+GGG - chr2_1:9462199-9462218 None:intergenic 50.0%
GATTTCGGTGATTGGGAGAG+TGG - chr2_1:9462201-9462220 None:intergenic 50.0%
TTTGACGGAACCATCGGCAA+CGG - chr2_1:9462297-9462316 None:intergenic 50.0%
AGCGAGGTCGTAGAGTTTGA+CGG - chr2_1:9462312-9462331 None:intergenic 50.0%
TTGAAGTAGGTGGAAGAGCG+AGG - chr2_1:9462328-9462347 None:intergenic 50.0%
AGAAACGAATCACGGCGAAC+AGG - chr2_1:9462407-9462426 None:intergenic 50.0%
CAGCGGAGAGAAACGAATCA+CGG - chr2_1:9462415-9462434 None:intergenic 50.0%
TTCCGGTTGCCGTGCTTAAT+GGG + chr2_1:9463495-9463514 Msa0193630:CDS 50.0%
GCCGCATGTGAGGAATTTGT+TGG + chr2_1:9463550-9463569 Msa0193630:CDS 50.0%
GAAGGGCTTCTTGCTAGTAC+TGG + chr2_1:9463692-9463711 Msa0193630:CDS 50.0%
!! GGCTTCTTGCTAGTACTGGT+TGG + chr2_1:9463696-9463715 Msa0193630:CDS 50.0%
GGCAACATGGAACTGATCCT+AGG + chr2_1:9463738-9463757 Msa0193630:CDS 50.0%
CTTCCCTTTCAAGATGCCCT+AGG - chr2_1:9463758-9463777 None:intergenic 50.0%
! CTAGGGCATCTTGAAAGGGA+AGG + chr2_1:9463756-9463775 Msa0193630:exon 50.0%
GGCCTACGCATACAAGAACT+AGG - chr2_1:9464261-9464280 None:intergenic 50.0%
GGGGACTGGATTGTTGTACT+TGG + chr2_1:9464336-9464355 Msa0193630:intron 50.0%
! GGCGATGCGGTTTTCGTAGA+AGG - chr2_1:9462108-9462127 None:intergenic 55.0%
!!! GAAGTTTTGAGCGGTGGCGA+CGG - chr2_1:9462129-9462148 None:intergenic 55.0%
GTCGCCACCGCTCAAAACTT+CGG + chr2_1:9462128-9462147 Msa0193630:CDS 55.0%
!!! GATGCCGAAGTTTTGAGCGG+TGG - chr2_1:9462135-9462154 None:intergenic 55.0%
AACTTCGGCATCCTCGGCAA+CGG + chr2_1:9462143-9462162 Msa0193630:CDS 55.0%
AGAGTTCGAGGACGTGGAGA+CGG - chr2_1:9462169-9462188 None:intergenic 55.0%
AGGCGGCGATTTCGGTGATT+GGG - chr2_1:9462208-9462227 None:intergenic 55.0%
TAGGCGGCGATTTCGGTGAT+TGG - chr2_1:9462209-9462228 None:intergenic 55.0%
TGTGACGTCGTAGATGCCGT+CGG - chr2_1:9462240-9462259 None:intergenic 55.0%
ACGGCATCTACGACGTCACA+TGG + chr2_1:9462240-9462259 Msa0193630:CDS 55.0%
ATTCGTTTCTCTCCGCTGCG+TGG + chr2_1:9462417-9462436 Msa0193630:CDS 55.0%
TTCGTTTCTCTCCGCTGCGT+GGG + chr2_1:9462418-9462437 Msa0193630:CDS 55.0%
GCAAAAACATCGGCGTGACG+AGG - chr2_1:9462536-9462555 None:intergenic 55.0%
GTTCCGGTTGCCGTGCTTAA+TGG + chr2_1:9463494-9463513 Msa0193630:CDS 55.0%
TGCCCATTAAGCACGGCAAC+CGG - chr2_1:9463500-9463519 None:intergenic 55.0%
! GTTGCCGTGCTTAATGGGCA+TGG + chr2_1:9463500-9463519 Msa0193630:CDS 55.0%
TGGAGGAGAGTTCGAGGACG+TGG - chr2_1:9462175-9462194 None:intergenic 60.0%
TGGGGTTGGAGGAGAGTTCG+AGG - chr2_1:9462181-9462200 None:intergenic 60.0%
GATTGGGAGAGTGGGGTTGG+AGG - chr2_1:9462192-9462211 None:intergenic 60.0%
GGTGATTGGGAGAGTGGGGT+TGG - chr2_1:9462195-9462214 None:intergenic 60.0%
! GGTGTCGTAGGCGGCGATTT+CGG - chr2_1:9462216-9462235 None:intergenic 60.0%
GACCGTGGATCGTCCCACTT+CGG + chr2_1:9462460-9462479 Msa0193630:CDS 60.0%
CACCGAAGTGGGACGATCCA+CGG - chr2_1:9462465-9462484 None:intergenic 60.0%
ACCTTCTTGACTGGGGGGAC+TGG + chr2_1:9464322-9464341 Msa0193630:intron 60.0%
TCCAGTCCCCCCAGTCAAGA+AGG - chr2_1:9464326-9464345 None:intergenic 60.0%
GACGTCGTAGATGCCGTCGG+CGG - chr2_1:9462237-9462256 None:intergenic 65.0%
GACGGAACCATCGGCAACGG+CGG - chr2_1:9462294-9462313 None:intergenic 65.0%
GACGGTATCGTCCCACGCAG+CGG - chr2_1:9462432-9462451 None:intergenic 65.0%
!! GATGCCGTCGGCGGTGTCGT+AGG - chr2_1:9462228-9462247 None:intergenic 70.0%
GGCAACGGCGGCGACGGTAA+TGG - chr2_1:9462282-9462301 None:intergenic 70.0%
ACCATCGGCAACGGCGGCGA+CGG - chr2_1:9462288-9462307 None:intergenic 70.0%
GAGCGGTGGCGACGGCGATG+CGG - chr2_1:9462121-9462140 None:intergenic 75.0%
CGTGGAGACGGCCGTTGCCG+AGG - chr2_1:9462157-9462176 None:intergenic 75.0%
GCCGCCTACGACACCGCCGA+CGG + chr2_1:9462221-9462240 Msa0193630:CDS 75.0%
!! GCCGTCGGCGGTGTCGTAGG+CGG - chr2_1:9462225-9462244 None:intergenic 75.0%
ACCGTCGCCGCCGTTGCCGA+TGG + chr2_1:9462284-9462303 Msa0193630:CDS 75.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 9461920 9464770 9461920 ID=Msa0193630;Name=Msa0193630
chr2_1 mRNA 9461920 9464770 9461920 ID=Msa0193630-mRNA-1;Parent=Msa0193630;Name=Msa0193630-mRNA-1;_AED=0.16;_eAED=0.16;_QI=136|1|1|1|0.5|0.33|3|294|318
chr2_1 exon 9461920 9462605 9461920 ID=Msa0193630-mRNA-1:exon:4340;Parent=Msa0193630-mRNA-1
chr2_1 exon 9463363 9463777 9463363 ID=Msa0193630-mRNA-1:exon:4341;Parent=Msa0193630-mRNA-1
chr2_1 exon 9464485 9464770 9464485 ID=Msa0193630-mRNA-1:exon:4342;Parent=Msa0193630-mRNA-1
chr2_1 five_prime_UTR 9461920 9462055 9461920 ID=Msa0193630-mRNA-1:five_prime_utr;Parent=Msa0193630-mRNA-1
chr2_1 CDS 9462056 9462605 9462056 ID=Msa0193630-mRNA-1:cds;Parent=Msa0193630-mRNA-1
chr2_1 CDS 9463363 9463769 9463363 ID=Msa0193630-mRNA-1:cds;Parent=Msa0193630-mRNA-1
chr2_1 three_prime_UTR 9463770 9463777 9463770 ID=Msa0193630-mRNA-1:three_prime_utr;Parent=Msa0193630-mRNA-1
chr2_1 three_prime_UTR 9464485 9464770 9464485 ID=Msa0193630-mRNA-1:three_prime_utr;Parent=Msa0193630-mRNA-1
Gene Sequence

>Msa0193630

ATGCCAGTTTTCAAAACCCCATTCAACGGTTACTCCGTCAAATTCAGCCCCTTCTACGAAAACCGCATCGCCGTCGCCACCGCTCAAAACTTCGGCATCCTCGGCAACGGCCGTCTCCACGTCCTCGAACTCTCCTCCAACCCCACTCTCCCAATCACCGAAATCGCCGCCTACGACACCGCCGACGGCATCTACGACGTCACATGGTCTGAATCTCACGACTCCATTACCGTCGCCGCCGTTGCCGATGGTTCCGTCAAACTCTACGACCTCGCTCTTCCACCTACTTCAAACCCTATTCGTTCCTTTCATGAACATACACGTGAAGTTCATTCCGTTGATTATAATCCTGTTCGCCGTGATTCGTTTCTCTCCGCTGCGTGGGACGATACCGTCAAATTATGGACCGTGGATCGTCCCACTTCGGTGAGAACGTTCAAAGAGCATGCTTATTGTGTTTATTCATCTGTTTGGAATCCTCGTCACGCCGATGTTTTTGCATCGGCTTCTGGGGATTGTACTGTCAGAATTTGGGATGTTCGTGAACCAGGTTCTACAATGATTCTTCCGGCACATGAACATGAGATTCTTTCGTGCGATTGGAATAAGTATGATGAATGTATAATTGCAACTGGGTCGGTTGATAAGTCAGTTAAGGTTTGGGATGTAAGGAGTTATAGGGTTCCGGTTGCCGTGCTTAATGGGCATGGTTATGCTGTTAGAAAGGTTAAATTTTCGCCGCATGTGAGGAATTTGTTGGTGTCTTGTTCTTATGATATGACTGTTTGTGTTTGGGATTTTATGGTGGAAGATGCTTTGGTGAGTAGATATGATCATCATACTGAGTTTGCTGTTGGGGTTGATATGAGTGTTCTTGTTGAAGGGCTTCTTGCTAGTACTGGTTGGGATGAACTTGTTTATGTTTGGCAACATGGAACTGATCCTAGGGCATCTTGA
Protein sequence

>Msa0193630

MPVFKTPFNGYSVKFSPFYENRIAVATAQNFGILGNGRLHVLELSSNPTLPITEIAAYDTADGIYDVTWSESHDSITVAAVADGSVKLYDLALPPTSNPIRSFHEHTREVHSVDYNPVRRDSFLSAAWDDTVKLWTVDRPTSVRTFKEHAYCVYSSVWNPRHADVFASASGDCTVRIWDVREPGSTMILPAHEHEILSCDWNKYDECIIATGSVDKSVKVWDVRSYRVPVAVLNGHGYAVRKVKFSPHVRNLLVSCSYDMTVCVWDFMVEDALVSRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQHGTDPRAS*