Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1397740 | AES64050.1 | 93.307 | 254 | 15 | 1 | 1 | 254 | 1 | 252 | 1.35e-173 | 501 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1397740 | sp|P26413|HSP70_SOYBN | 73.228 | 254 | 66 | 1 | 1 | 254 | 1 | 252 | 2.15e-135 | 398 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1397740 | G7ILM0 | 93.307 | 254 | 15 | 1 | 1 | 254 | 1 | 252 | 6.46e-174 | 501 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002460 | Msa1397740 | 0.801763 | 7.722442e-49 | -8.615850e-47 |
| Msa0010890 | Msa1397740 | 0.805215 | 1.486833e-49 | -8.615850e-47 |
| Msa0028620 | Msa1397740 | 0.804206 | 2.414319e-49 | -8.615850e-47 |
| Msa0074600 | Msa1397740 | 0.809780 | 1.597318e-50 | -8.615850e-47 |
| Msa0077400 | Msa1397740 | 0.828252 | 9.967414e-55 | -8.615850e-47 |
| Msa0081020 | Msa1397740 | 0.811012 | 8.660029e-51 | -8.615850e-47 |
| Msa0108410 | Msa1397740 | 0.810895 | 9.180900e-51 | -8.615850e-47 |
| Msa1353470 | Msa1397740 | 0.800092 | 1.695104e-48 | -8.615850e-47 |
| Msa1388930 | Msa1397740 | 0.832016 | 1.202408e-55 | -8.615850e-47 |
| Msa1392240 | Msa1397740 | 0.803848 | 2.865531e-49 | -8.615850e-47 |
| Msa1397740 | Msa1422420 | 0.805440 | 1.333366e-49 | -8.615850e-47 |
| Msa1397740 | Msa1424630 | 0.815522 | 8.853701e-52 | -8.615850e-47 |
| Msa1397740 | Msa1425090 | 0.845948 | 2.952583e-59 | -8.615850e-47 |
| Msa1397740 | Msa1430550 | 0.812653 | 3.804109e-51 | -8.615850e-47 |
| Msa1397740 | Msa1440560 | 0.813953 | 1.971090e-51 | -8.615850e-47 |
| Msa1397740 | Msa1448640 | 0.803744 | 3.012190e-49 | -8.615850e-47 |
| Msa1397740 | Msa1450100 | 0.824088 | 9.755116e-54 | -8.615850e-47 |
| Msa1397740 | Msa1458680 | 0.825755 | 3.941988e-54 | -8.615850e-47 |
| Msa1397740 | Msa1459100 | 0.843404 | 1.430646e-58 | -8.615850e-47 |
| Msa0615290 | Msa1397740 | 0.825803 | 3.840246e-54 | -8.615850e-47 |
| Msa0625190 | Msa1397740 | 0.835634 | 1.496659e-56 | -8.615850e-47 |
| Msa0631330 | Msa1397740 | 0.804147 | 2.483821e-49 | -8.615850e-47 |
| Msa0633700 | Msa1397740 | 0.803985 | 2.684443e-49 | -8.615850e-47 |
| Msa0661650 | Msa1397740 | 0.805812 | 1.114397e-49 | -8.615850e-47 |
| Msa0685900 | Msa1397740 | 0.826685 | 2.368868e-54 | -8.615850e-47 |
| Msa0690340 | Msa1397740 | 0.837721 | 4.396643e-57 | -8.615850e-47 |
| Msa0696850 | Msa1397740 | 0.801580 | 8.419869e-49 | -8.615850e-47 |
| Msa0698290 | Msa1397740 | 0.820891 | 5.396348e-53 | -8.615850e-47 |
| Msa0708310 | Msa1397740 | 0.821901 | 3.155082e-53 | -8.615850e-47 |
| Msa0738340 | Msa1397740 | 0.813806 | 2.124528e-51 | -8.615850e-47 |
| Msa0817460 | Msa1397740 | 0.803783 | 2.956203e-49 | -8.615850e-47 |
| Msa0124320 | Msa1397740 | 0.822253 | 2.615285e-53 | -8.615850e-47 |
| Msa0195100 | Msa1397740 | 0.810012 | 1.423927e-50 | -8.615850e-47 |
| Msa0195890 | Msa1397740 | 0.801865 | 7.358476e-49 | -8.615850e-47 |
| Msa0202800 | Msa1397740 | 0.801268 | 9.755528e-49 | -8.615850e-47 |
| Msa0204840 | Msa1397740 | 0.810241 | 1.270923e-50 | -8.615850e-47 |
| Msa0208140 | Msa1397740 | 0.811123 | 8.193692e-51 | -8.615850e-47 |
| Msa0225100 | Msa1397740 | 0.822714 | 2.042904e-53 | -8.615850e-47 |
| Msa0237310 | Msa1397740 | 0.802488 | 5.478076e-49 | -8.615850e-47 |
| Msa1226460 | Msa1397740 | 0.801455 | 8.934081e-49 | -8.615850e-47 |
| Msa1238820 | Msa1397740 | 0.842299 | 2.814149e-58 | -8.615850e-47 |
| Msa1266490 | Msa1397740 | 0.800127 | 1.667575e-48 | -8.615850e-47 |
| Msa1269480 | Msa1397740 | 0.808894 | 2.474994e-50 | -8.615850e-47 |
| Msa1277150 | Msa1397740 | 0.823532 | 1.316416e-53 | -8.615850e-47 |
| Msa1296890 | Msa1397740 | 0.810063 | 1.388884e-50 | -8.615850e-47 |
| Msa1299960 | Msa1397740 | 0.817995 | 2.469576e-52 | -8.615850e-47 |
| Msa1325060 | Msa1397740 | 0.830499 | 2.838333e-55 | -8.615850e-47 |
| Msa0367870 | Msa1397740 | 0.804598 | 2.000134e-49 | -8.615850e-47 |
| Msa0386090 | Msa1397740 | 0.810605 | 1.060634e-50 | -8.615850e-47 |
| Msa0389770 | Msa1397740 | 0.800623 | 1.321492e-48 | -8.615850e-47 |
| Msa0403640 | Msa1397740 | 0.826470 | 2.664979e-54 | -8.615850e-47 |
| Msa0432670 | Msa1397740 | 0.809182 | 2.146906e-50 | -8.615850e-47 |
| Msa0448340 | Msa1397740 | 0.802956 | 4.385255e-49 | -8.615850e-47 |
| Msa0455760 | Msa1397740 | 0.804905 | 1.725824e-49 | -8.615850e-47 |
| Msa0464680 | Msa1397740 | 0.805529 | 1.277795e-49 | -8.615850e-47 |
| Msa0992680 | Msa1397740 | 0.809112 | 2.222391e-50 | -8.615850e-47 |
| Msa0999290 | Msa1397740 | 0.870976 | 9.708669e-67 | -8.615850e-47 |
| Msa0999680 | Msa1397740 | 0.833629 | 4.778195e-56 | -8.615850e-47 |
| Msa1000290 | Msa1397740 | 0.800711 | 1.267731e-48 | -8.615850e-47 |
| Msa1002330 | Msa1397740 | 0.811217 | 7.820197e-51 | -8.615850e-47 |
| Msa1019000 | Msa1397740 | 0.898814 | 3.668347e-77 | -8.615850e-47 |
| Msa1019150 | Msa1397740 | 0.939001 | 2.643680e-99 | -8.615850e-47 |
| Msa1026480 | Msa1397740 | 0.816046 | 6.765697e-52 | -8.615850e-47 |
| Msa1037780 | Msa1397740 | 0.838808 | 2.307420e-57 | -8.615850e-47 |
| Msa1047080 | Msa1397740 | 0.806440 | 8.216414e-50 | -8.615850e-47 |
| Msa1066670 | Msa1397740 | 0.823043 | 1.713254e-53 | -8.615850e-47 |
| Msa1081330 | Msa1397740 | 0.837854 | 4.065921e-57 | -8.615850e-47 |
| Msa1083840 | Msa1397740 | 0.803992 | 2.675074e-49 | -8.615850e-47 |
| Msa1089940 | Msa1397740 | 0.802589 | 5.223153e-49 | -8.615850e-47 |
| Msa1100050 | Msa1397740 | 0.809289 | 2.036434e-50 | -8.615850e-47 |
| Msa1101860 | Msa1397740 | 0.834726 | 2.537781e-56 | -8.615850e-47 |
| Msa0264830 | Msa1397740 | 0.806172 | 9.358564e-50 | -8.615850e-47 |
| Msa0266180 | Msa1397740 | 0.828690 | 7.815494e-55 | -8.615850e-47 |
| Msa0274730 | Msa1397740 | 0.803693 | 3.085600e-49 | -8.615850e-47 |
| Msa0275300 | Msa1397740 | 0.829013 | 6.525431e-55 | -8.615850e-47 |
| Msa0283470 | Msa1397740 | 0.809586 | 1.758236e-50 | -8.615850e-47 |
| Msa0287740 | Msa1397740 | 0.826027 | 3.398499e-54 | -8.615850e-47 |
| Msa0287870 | Msa1397740 | 0.822847 | 1.902472e-53 | -8.615850e-47 |
| Msa0290720 | Msa1397740 | 0.826457 | 2.684772e-54 | -8.615850e-47 |
| Msa0290870 | Msa1397740 | 0.805344 | 1.396787e-49 | -8.615850e-47 |
| Msa0307540 | Msa1397740 | 0.810135 | 1.339960e-50 | -8.615850e-47 |
| Msa0308630 | Msa1397740 | 0.800230 | 1.589051e-48 | -8.615850e-47 |
| Msa0331980 | Msa1397740 | 0.800800 | 1.215848e-48 | -8.615850e-47 |
| Msa0363790 | Msa1397740 | 0.807668 | 4.516461e-50 | -8.615850e-47 |
| Msa1119940 | Msa1397740 | 0.800181 | 1.625814e-48 | -8.615850e-47 |
| Msa1121490 | Msa1397740 | 0.805363 | 1.383923e-49 | -8.615850e-47 |
| Msa1131050 | Msa1397740 | 0.846910 | 1.613455e-59 | -8.615850e-47 |
| Msa1147740 | Msa1397740 | 0.951604 | 1.437698e-109 | -8.615850e-47 |
| Msa1155170 | Msa1397740 | -0.803585 | 3.249470e-49 | -8.615850e-47 |
| Msa1175180 | Msa1397740 | 0.808540 | 2.945836e-50 | -8.615850e-47 |
| Msa1188710 | Msa1397740 | 0.800882 | 1.169734e-48 | -8.615850e-47 |
| Msa1190920 | Msa1397740 | 0.807175 | 5.747904e-50 | -8.615850e-47 |
| Msa1207220 | Msa1397740 | 0.807283 | 5.450824e-50 | -8.615850e-47 |
| Msa0486690 | Msa1397740 | 0.822466 | 2.333971e-53 | -8.615850e-47 |
| Msa0528950 | Msa1397740 | 0.803188 | 3.928151e-49 | -8.615850e-47 |
| Msa0534880 | Msa1397740 | 0.806398 | 8.388670e-50 | -8.615850e-47 |
| Msa0548470 | Msa1397740 | 0.802514 | 5.410119e-49 | -8.615850e-47 |
| Msa0557460 | Msa1397740 | 0.809939 | 1.476539e-50 | -8.615850e-47 |
| Msa0559500 | Msa1397740 | 0.812852 | 3.441709e-51 | -8.615850e-47 |
| Msa0559510 | Msa1397740 | 0.800644 | 1.308181e-48 | -8.615850e-47 |
| Msa0562660 | Msa1397740 | 0.826074 | 3.311287e-54 | -8.615850e-47 |
| Msa0574600 | Msa1397740 | 0.800703 | 1.272535e-48 | -8.615850e-47 |
| Msa0579660 | Msa1397740 | 0.816815 | 4.551454e-52 | -8.615850e-47 |
| Msa0600700 | Msa1397740 | 0.808906 | 2.460402e-50 | -8.615850e-47 |
| Msa0855870 | Msa1397740 | 0.813540 | 2.430849e-51 | -8.615850e-47 |
| Msa0871880 | Msa1397740 | 0.804105 | 2.534000e-49 | -8.615850e-47 |
| Msa0875290 | Msa1397740 | 0.801211 | 1.002130e-48 | -8.615850e-47 |
| Msa0899970 | Msa1397740 | 0.842205 | 2.981193e-58 | -8.615850e-47 |
| Msa0927310 | Msa1397740 | 0.872816 | 2.377184e-67 | -8.615850e-47 |
| Msa0937230 | Msa1397740 | 0.816191 | 6.280013e-52 | -8.615850e-47 |
| Msa0965080 | Msa1397740 | 0.826104 | 3.257273e-54 | -8.615850e-47 |
| Msa0965290 | Msa1397740 | 0.834764 | 2.481439e-56 | -8.615850e-47 |
| Msa0965610 | Msa1397740 | 0.826551 | 2.548982e-54 | -8.615850e-47 |
| Msa0967870 | Msa1397740 | 0.818879 | 1.556511e-52 | -8.615850e-47 |
| Msa0974520 | Msa1397740 | 0.811790 | 5.869438e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1397740 | MtrunA17_Chr2g0284681 | 93.307 | 254 | 15 | 1 | 1 | 254 | 1 | 252 | 1.86e-177 | 501 |
| Msa1397740 | MtrunA17_Chr4g0073741 | 73.622 | 254 | 65 | 1 | 1 | 254 | 1 | 252 | 8.83e-139 | 404 |
| Msa1397740 | MtrunA17_Chr4g0031321 | 73.684 | 247 | 63 | 1 | 8 | 254 | 9 | 253 | 2.27e-131 | 385 |
| Msa1397740 | MtrunA17_Chr4g0031301 | 73.279 | 247 | 64 | 1 | 8 | 254 | 9 | 253 | 5.12e-131 | 384 |
| Msa1397740 | MtrunA17_Chr7g0262821 | 72.065 | 247 | 67 | 1 | 8 | 254 | 9 | 253 | 3.49e-129 | 380 |
| Msa1397740 | MtrunA17_Chr7g0223181 | 72.065 | 247 | 67 | 1 | 8 | 254 | 9 | 253 | 6.82e-128 | 376 |
| Msa1397740 | MtrunA17_Chr7g0223291 | 71.660 | 247 | 68 | 1 | 8 | 254 | 9 | 253 | 5.19e-127 | 374 |
| Msa1397740 | MtrunA17_Chr7g0223741 | 68.254 | 252 | 76 | 2 | 5 | 254 | 6 | 255 | 6.21e-120 | 354 |
| Msa1397740 | MtrunA17_Chr2g0293561 | 65.462 | 249 | 82 | 2 | 8 | 254 | 9 | 255 | 7.51e-119 | 345 |
| Msa1397740 | MtrunA17_Chr7g0245521 | 66.265 | 249 | 80 | 2 | 8 | 254 | 9 | 255 | 3.23e-118 | 338 |
| Msa1397740 | MtrunA17_Chr6g0462681 | 65.992 | 247 | 82 | 1 | 8 | 254 | 9 | 253 | 3.16e-117 | 350 |
| Msa1397740 | MtrunA17_Chr7g0223851 | 66.935 | 248 | 78 | 2 | 5 | 250 | 15 | 260 | 2.62e-116 | 346 |
| Msa1397740 | MtrunA17_Chr7g0225671 | 65.234 | 256 | 85 | 2 | 1 | 254 | 9 | 262 | 3.21e-116 | 346 |
| Msa1397740 | MtrunA17_Chr6g0462601 | 67.611 | 247 | 78 | 1 | 8 | 254 | 9 | 253 | 3.42e-116 | 345 |
| Msa1397740 | MtrunA17_Chr7g0221661 | 66.265 | 249 | 80 | 2 | 8 | 254 | 9 | 255 | 8.23e-116 | 344 |
| Msa1397740 | MtrunA17_Chr1g0151991 | 62.302 | 252 | 91 | 2 | 5 | 254 | 6 | 255 | 1.14e-115 | 333 |
| Msa1397740 | MtrunA17_Chr2g0298851 | 64.800 | 250 | 84 | 2 | 7 | 254 | 8 | 255 | 1.34e-114 | 341 |
| Msa1397740 | MtrunA17_Chr7g0223731 | 65.873 | 252 | 82 | 2 | 5 | 254 | 6 | 255 | 1.93e-114 | 341 |
| Msa1397740 | MtrunA17_Chr2g0296391 | 64.427 | 253 | 86 | 2 | 4 | 254 | 5 | 255 | 5.25e-114 | 337 |
| Msa1397740 | MtrunA17_Chr7g0223031 | 64.286 | 252 | 86 | 2 | 5 | 254 | 6 | 255 | 5.48e-114 | 340 |
| Msa1397740 | MtrunA17_Chr7g0223711 | 65.060 | 249 | 83 | 2 | 8 | 254 | 9 | 255 | 6.07e-114 | 340 |
| Msa1397740 | MtrunA17_Chr5g0427901 | 63.077 | 260 | 81 | 3 | 8 | 254 | 9 | 266 | 2.04e-113 | 338 |
| Msa1397740 | MtrunA17_Chr7g0228281 | 65.200 | 250 | 83 | 2 | 7 | 254 | 69 | 316 | 2.73e-113 | 338 |
| Msa1397740 | MtrunA17_Chr7g0223721 | 65.060 | 249 | 83 | 2 | 8 | 254 | 9 | 255 | 1.53e-112 | 336 |
| Msa1397740 | MtrunA17_Chr7g0233311 | 65.462 | 249 | 82 | 2 | 8 | 254 | 9 | 255 | 5.00e-112 | 335 |
| Msa1397740 | MtrunA17_Chr2g0293581 | 61.811 | 254 | 93 | 2 | 3 | 254 | 5 | 256 | 3.33e-111 | 333 |
| Msa1397740 | MtrunA17_Chr6g0462641 | 63.922 | 255 | 89 | 2 | 1 | 254 | 1 | 253 | 1.19e-110 | 333 |
| Msa1397740 | MtrunA17_Chr7g0233301 | 64.659 | 249 | 84 | 2 | 8 | 254 | 9 | 255 | 1.32e-110 | 330 |
| Msa1397740 | MtrunA17_Chr6g0462771 | 64.400 | 250 | 87 | 1 | 5 | 254 | 6 | 253 | 1.68e-110 | 332 |
| Msa1397740 | MtrunA17_Chr7g0223821 | 64.286 | 252 | 86 | 2 | 5 | 254 | 6 | 255 | 2.77e-110 | 333 |
| Msa1397740 | MtrunA17_Chr7g0223701 | 64.516 | 248 | 84 | 2 | 8 | 253 | 9 | 254 | 3.46e-110 | 331 |
| Msa1397740 | MtrunA17_Chr2g0299921 | 67.206 | 247 | 77 | 2 | 8 | 254 | 1029 | 1271 | 4.76e-110 | 348 |
| Msa1397740 | MtrunA17_Chr2g0299921 | 65.726 | 248 | 80 | 3 | 8 | 254 | 1413 | 1656 | 8.42e-106 | 335 |
| Msa1397740 | MtrunA17_Chr4g0040931 | 63.563 | 247 | 86 | 2 | 8 | 252 | 9 | 253 | 5.22e-110 | 329 |
| Msa1397740 | MtrunA17_Chr7g0223781 | 63.454 | 249 | 87 | 2 | 8 | 254 | 9 | 255 | 5.22e-110 | 329 |
| Msa1397740 | MtrunA17_Chr7g0248131 | 65.737 | 251 | 80 | 4 | 8 | 254 | 9 | 257 | 1.54e-109 | 328 |
| Msa1397740 | MtrunA17_Chr7g0223751 | 62.249 | 249 | 90 | 2 | 8 | 254 | 9 | 255 | 3.85e-109 | 327 |
| Msa1397740 | MtrunA17_Chr2g0293601 | 62.651 | 249 | 89 | 2 | 8 | 254 | 9 | 255 | 4.96e-109 | 323 |
| Msa1397740 | MtrunA17_Chr7g0223621 | 63.052 | 249 | 88 | 2 | 8 | 254 | 9 | 255 | 1.03e-108 | 326 |
| Msa1397740 | MtrunA17_Chr2g0299851 | 65.182 | 247 | 82 | 2 | 8 | 254 | 1038 | 1280 | 1.05e-108 | 342 |
| Msa1397740 | MtrunA17_Chr6g0462711 | 62.948 | 251 | 90 | 2 | 5 | 254 | 7 | 255 | 2.18e-108 | 327 |
| Msa1397740 | MtrunA17_Chr2g0299821 | 62.651 | 249 | 89 | 2 | 8 | 254 | 9 | 255 | 6.59e-108 | 320 |
| Msa1397740 | MtrunA17_Chr7g0223801 | 62.249 | 249 | 89 | 3 | 8 | 254 | 9 | 254 | 7.11e-108 | 324 |
| Msa1397740 | MtrunA17_Chr8g0350731 | 63.454 | 249 | 87 | 2 | 8 | 254 | 37 | 283 | 8.11e-108 | 325 |
| Msa1397740 | MtrunA17_Chr2g0298861 | 61.776 | 259 | 84 | 3 | 9 | 254 | 10 | 266 | 1.75e-107 | 323 |
| Msa1397740 | MtrunA17_Chr2g0287631 | 64.659 | 249 | 84 | 2 | 8 | 254 | 9 | 255 | 8.95e-107 | 321 |
| Msa1397740 | MtrunA17_Chr8g0388671 | 62.598 | 254 | 88 | 4 | 2 | 254 | 32 | 279 | 1.70e-105 | 319 |
| Msa1397740 | MtrunA17_Chr8g0388761 | 61.660 | 253 | 90 | 4 | 3 | 254 | 33 | 279 | 5.16e-105 | 318 |
| Msa1397740 | MtrunA17_Chr2g0299791 | 63.563 | 247 | 86 | 2 | 8 | 254 | 1042 | 1284 | 8.41e-102 | 323 |
| Msa1397740 | MtrunA17_Chr7g0248151 | 64.257 | 249 | 85 | 2 | 8 | 254 | 9 | 255 | 1.59e-101 | 308 |
| Msa1397740 | MtrunA17_Chr7g0215261 | 60.800 | 250 | 76 | 3 | 7 | 254 | 8 | 237 | 5.71e-101 | 305 |
| Msa1397740 | MtrunA17_Chr2g0299881 | 63.200 | 250 | 84 | 4 | 9 | 254 | 1039 | 1284 | 5.55e-99 | 315 |
| Msa1397740 | MtrunA17_Chr2g0299881 | 60.606 | 66 | 22 | 1 | 184 | 249 | 1414 | 1475 | 2.50e-16 | 78.6 |
| Msa1397740 | MtrunA17_Chr7g0223631 | 59.036 | 249 | 84 | 4 | 8 | 254 | 9 | 241 | 3.80e-96 | 293 |
| Msa1397740 | MtrunA17_Chr4g0012541 | 58.468 | 248 | 90 | 3 | 5 | 250 | 6 | 242 | 7.68e-94 | 288 |
| Msa1397740 | MtrunA17_Chr2g0331381 | 55.645 | 248 | 80 | 3 | 9 | 254 | 7 | 226 | 6.98e-93 | 281 |
| Msa1397740 | MtrunA17_Chr7g0217971 | 56.627 | 249 | 80 | 3 | 8 | 254 | 9 | 231 | 3.37e-92 | 283 |
| Msa1397740 | MtrunA17_Chr7g0223831 | 57.540 | 252 | 75 | 3 | 5 | 254 | 6 | 227 | 1.95e-91 | 281 |
| Msa1397740 | MtrunA17_Chr2g0293271 | 60.000 | 210 | 80 | 2 | 20 | 227 | 43 | 250 | 4.02e-87 | 265 |
| Msa1397740 | MtrunA17_Chr7g0223671 | 61.413 | 184 | 69 | 1 | 71 | 254 | 8 | 189 | 2.62e-81 | 242 |
| Msa1397740 | MtrunA17_Chr8g0390821 | 48.667 | 300 | 84 | 8 | 8 | 254 | 11 | 293 | 6.36e-80 | 253 |
| Msa1397740 | MtrunA17_Chr2g0279901 | 53.815 | 249 | 98 | 6 | 9 | 254 | 57 | 291 | 7.66e-79 | 250 |
| Msa1397740 | MtrunA17_Chr6g0462611 | 63.351 | 191 | 68 | 1 | 64 | 254 | 15 | 203 | 8.13e-79 | 249 |
| Msa1397740 | MtrunA17_Chr6g0462861 | 51.807 | 249 | 103 | 5 | 8 | 254 | 9 | 242 | 2.68e-77 | 246 |
| Msa1397740 | MtrunA17_Chr4g0049501 | 50.400 | 250 | 112 | 4 | 6 | 254 | 51 | 289 | 5.28e-77 | 245 |
| Msa1397740 | MtrunA17_Chr7g0223541 | 62.500 | 184 | 67 | 1 | 71 | 254 | 31 | 212 | 2.98e-76 | 241 |
| Msa1397740 | MtrunA17_Chr7g0223771 | 65.161 | 155 | 52 | 1 | 91 | 245 | 2 | 154 | 5.44e-69 | 210 |
| Msa1397740 | MtrunA17_Chr1g0188601 | 60.843 | 166 | 63 | 1 | 89 | 254 | 1 | 164 | 1.16e-68 | 210 |
| Msa1397740 | MtrunA17_Chr2g0277021 | 47.390 | 249 | 120 | 5 | 7 | 254 | 70 | 308 | 1.73e-64 | 213 |
| Msa1397740 | MtrunA17_Chr7g0223681 | 61.111 | 162 | 61 | 1 | 88 | 249 | 2 | 161 | 1.93e-63 | 207 |
| Msa1397740 | MtrunA17_Chr7g0223861 | 66.165 | 133 | 43 | 1 | 75 | 207 | 4 | 134 | 1.30e-58 | 182 |
| Msa1397740 | MtrunA17_Chr1g0166551 | 43.548 | 248 | 64 | 3 | 8 | 253 | 5 | 178 | 4.25e-58 | 192 |
| Msa1397740 | MtrunA17_Chr6g0462791 | 60.000 | 150 | 57 | 2 | 105 | 254 | 1 | 147 | 1.98e-57 | 181 |
| Msa1397740 | MtrunA17_Chr4g0046881 | 61.417 | 127 | 47 | 1 | 128 | 254 | 10 | 134 | 1.85e-49 | 159 |
| Msa1397740 | MtrunA17_Chr4g0004331 | 37.143 | 245 | 151 | 2 | 9 | 252 | 4 | 246 | 2.46e-48 | 170 |
| Msa1397740 | MtrunA17_Chr6g0462751 | 49.102 | 167 | 64 | 3 | 64 | 228 | 12 | 159 | 1.94e-46 | 157 |
| Msa1397740 | MtrunA17_Chr2g0331901 | 35.918 | 245 | 154 | 2 | 9 | 252 | 4 | 246 | 3.25e-45 | 161 |
| Msa1397740 | MtrunA17_Chr6g0462701 | 50.327 | 153 | 50 | 2 | 102 | 254 | 27 | 153 | 1.80e-42 | 142 |
| Msa1397740 | MtrunA17_Chr5g0444001 | 33.878 | 245 | 159 | 2 | 9 | 252 | 4 | 246 | 3.11e-42 | 150 |
| Msa1397740 | MtrunA17_Chr6g0481391 | 53.226 | 124 | 53 | 2 | 35 | 158 | 13 | 131 | 3.31e-38 | 130 |
| Msa1397740 | MtrunA17_Chr3g0098761 | 31.429 | 245 | 165 | 2 | 9 | 252 | 4 | 246 | 6.69e-38 | 140 |
| Msa1397740 | MtrunA17_Chr6g0462631 | 46.988 | 166 | 61 | 3 | 89 | 254 | 15 | 153 | 6.98e-38 | 134 |
| Msa1397740 | MtrunA17_Chr5g0394231 | 40.556 | 180 | 55 | 3 | 71 | 250 | 5 | 132 | 7.09e-35 | 123 |
| Msa1397740 | MtrunA17_Chr5g0394391 | 31.890 | 254 | 154 | 7 | 8 | 249 | 29 | 275 | 2.23e-31 | 121 |
| Msa1397740 | MtrunA17_Chr6g0462621 | 73.016 | 63 | 17 | 0 | 8 | 70 | 9 | 71 | 1.29e-29 | 106 |
| Msa1397740 | MtrunA17_Chr3g0120101 | 29.167 | 264 | 161 | 7 | 6 | 252 | 24 | 278 | 1.48e-26 | 108 |
| Msa1397740 | MtrunA17_Chr6g0481381 | 62.162 | 74 | 28 | 0 | 175 | 248 | 1 | 74 | 9.86e-26 | 99.8 |
| Msa1397740 | MtrunA17_Chr7g0223691 | 70.769 | 65 | 17 | 1 | 8 | 70 | 9 | 73 | 1.16e-25 | 96.3 |
| Msa1397740 | MtrunA17_Chr1g0188591 | 61.765 | 68 | 24 | 1 | 5 | 70 | 6 | 73 | 6.80e-24 | 92.0 |
| Msa1397740 | MtrunA17_Chr4g0064621 | 28.846 | 260 | 163 | 8 | 8 | 249 | 140 | 395 | 1.81e-20 | 90.5 |
| Msa1397740 | MtrunA17_Chr7g0223791 | 51.220 | 82 | 32 | 2 | 53 | 134 | 18 | 91 | 1.23e-19 | 83.6 |
| Msa1397740 | MtrunA17_Chr4g0060241 | 27.381 | 252 | 162 | 7 | 8 | 248 | 20 | 261 | 4.87e-19 | 85.9 |
| Msa1397740 | MtrunA17_Chr5g0442161 | 31.818 | 154 | 96 | 4 | 8 | 156 | 28 | 177 | 2.33e-16 | 74.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1397740 | AT1G16030.1 | 73.622 | 254 | 65 | 1 | 1 | 254 | 1 | 252 | 2.80e-134 | 393 |
| Msa1397740 | AT1G56410.1 | 73.279 | 247 | 64 | 1 | 8 | 254 | 9 | 253 | 8.33e-131 | 383 |
| Msa1397740 | AT5G02500.2 | 72.470 | 247 | 66 | 1 | 8 | 254 | 9 | 253 | 5.96e-130 | 378 |
| Msa1397740 | AT5G02500.1 | 72.470 | 247 | 66 | 1 | 8 | 254 | 9 | 253 | 2.59e-128 | 378 |
| Msa1397740 | AT3G09440.1 | 71.660 | 247 | 68 | 1 | 8 | 254 | 9 | 253 | 2.09e-127 | 375 |
| Msa1397740 | AT3G09440.4 | 71.660 | 247 | 68 | 1 | 8 | 254 | 9 | 253 | 2.09e-127 | 375 |
| Msa1397740 | AT3G09440.2 | 71.660 | 247 | 68 | 1 | 8 | 254 | 9 | 253 | 2.09e-127 | 375 |
| Msa1397740 | AT3G09440.3 | 71.660 | 247 | 68 | 1 | 8 | 254 | 9 | 253 | 2.09e-127 | 375 |
| Msa1397740 | AT3G12580.1 | 72.470 | 247 | 66 | 1 | 8 | 254 | 9 | 253 | 1.14e-126 | 374 |
| Msa1397740 | AT5G02490.1 | 71.255 | 247 | 69 | 1 | 8 | 254 | 9 | 253 | 3.07e-126 | 372 |
| Msa1397740 | AT1G09080.2 | 65.854 | 246 | 78 | 3 | 9 | 254 | 43 | 282 | 1.30e-111 | 335 |
| Msa1397740 | AT1G09080.1 | 65.854 | 246 | 78 | 3 | 9 | 254 | 53 | 292 | 1.98e-111 | 335 |
| Msa1397740 | AT5G42020.2 | 62.205 | 254 | 89 | 4 | 2 | 254 | 31 | 278 | 9.99e-107 | 321 |
| Msa1397740 | AT5G42020.1 | 62.205 | 254 | 89 | 4 | 2 | 254 | 31 | 278 | 1.88e-106 | 322 |
| Msa1397740 | AT5G28540.1 | 62.205 | 254 | 89 | 4 | 2 | 254 | 31 | 278 | 2.69e-106 | 322 |
| Msa1397740 | AT5G42020.3 | 62.205 | 254 | 89 | 4 | 2 | 254 | 36 | 283 | 3.27e-106 | 322 |
| Msa1397740 | AT4G37910.1 | 53.036 | 247 | 104 | 5 | 9 | 254 | 55 | 290 | 1.74e-78 | 250 |
| Msa1397740 | AT4G37910.2 | 53.036 | 247 | 104 | 5 | 9 | 254 | 55 | 290 | 1.74e-78 | 250 |
| Msa1397740 | AT5G09590.1 | 52.016 | 248 | 103 | 6 | 9 | 253 | 60 | 294 | 2.12e-74 | 239 |
| Msa1397740 | AT4G24280.1 | 46.988 | 249 | 121 | 5 | 7 | 254 | 79 | 317 | 4.45e-65 | 215 |
| Msa1397740 | AT5G49910.1 | 46.850 | 254 | 114 | 6 | 7 | 254 | 79 | 317 | 8.93e-65 | 214 |
| Msa1397740 | AT1G79930.2 | 39.184 | 245 | 146 | 2 | 9 | 252 | 4 | 246 | 7.73e-52 | 180 |
| Msa1397740 | AT1G79930.1 | 39.184 | 245 | 146 | 2 | 9 | 252 | 4 | 246 | 1.31e-51 | 180 |
| Msa1397740 | AT1G79920.1 | 38.776 | 245 | 147 | 2 | 9 | 252 | 4 | 246 | 1.71e-50 | 176 |
| Msa1397740 | AT1G79920.3 | 38.776 | 245 | 147 | 2 | 9 | 252 | 4 | 246 | 1.84e-50 | 176 |
| Msa1397740 | AT1G79920.2 | 38.776 | 245 | 147 | 2 | 9 | 252 | 4 | 246 | 1.84e-50 | 176 |
| Msa1397740 | AT1G79920.4 | 38.776 | 245 | 147 | 2 | 9 | 252 | 4 | 246 | 1.84e-50 | 176 |
| Msa1397740 | AT1G11660.4 | 36.585 | 246 | 152 | 3 | 9 | 252 | 4 | 247 | 2.82e-44 | 159 |
| Msa1397740 | AT1G11660.3 | 36.585 | 246 | 152 | 3 | 9 | 252 | 4 | 247 | 2.82e-44 | 159 |
| Msa1397740 | AT1G11660.1 | 36.585 | 246 | 152 | 3 | 9 | 252 | 4 | 247 | 2.82e-44 | 159 |
| Msa1397740 | AT1G11660.2 | 36.967 | 211 | 129 | 3 | 44 | 252 | 2 | 210 | 2.11e-34 | 130 |
| Msa1397740 | AT2G32120.1 | 30.556 | 252 | 158 | 7 | 8 | 248 | 30 | 275 | 1.06e-26 | 108 |
| Msa1397740 | AT2G32120.2 | 30.556 | 252 | 158 | 7 | 8 | 248 | 30 | 275 | 1.06e-26 | 108 |
| Msa1397740 | AT4G16660.2 | 25.564 | 266 | 177 | 5 | 5 | 254 | 47 | 307 | 8.88e-24 | 100 |
| Msa1397740 | AT4G16660.1 | 25.564 | 266 | 177 | 5 | 5 | 254 | 23 | 283 | 9.88e-24 | 100 |
Find 57 sgRNAs with CRISPR-Local
Find 134 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAAATTGCTGAAACATATT+TGG | 0.113940 | tig0022176:+104608 | Msa1397740:CDS |
| CATGGTGTTGTCTAAGTTAA+AGG | 0.173778 | tig0022176:+104587 | Msa1397740:CDS |
| ACTGCAGCTGCTATTGCTTA+TGG | 0.208608 | tig0022176:+104759 | Msa1397740:CDS |
| TGGTTTGGAACAACCTTAAA+AGG | 0.212043 | tig0022176:-104492 | None:intergenic |
| CAATCACGGGTTTGTCTTTG+TGG | 0.307374 | tig0022176:-104512 | None:intergenic |
| AATGTTCTTGTCTTTGATCT+TGG | 0.331932 | tig0022176:+104816 | Msa1397740:CDS |
| ACACGGTTCCCTTGGTCGTT+TGG | 0.354947 | tig0022176:-104309 | None:intergenic |
| ACTTTGGGAGATACTCATTT+GGG | 0.360641 | tig0022176:+104900 | Msa1397740:CDS |
| TTCAAGGTTAAGGCCACTTT+GGG | 0.364020 | tig0022176:+104885 | Msa1397740:CDS |
| TTATGTCTTGTTGGACTGAT+TGG | 0.374106 | tig0022176:-104461 | None:intergenic |
| GAAATTGCTGAAACATATTT+GGG | 0.374370 | tig0022176:+104609 | Msa1397740:CDS |
| ACGGGTTTGTCTTTGTGGTT+TGG | 0.375126 | tig0022176:-104507 | None:intergenic |
| AGCTGCTATTGCTTATGGTT+TGG | 0.376546 | tig0022176:+104764 | Msa1397740:CDS |
| CACTTTGGGAGATACTCATT+TGG | 0.379211 | tig0022176:+104899 | Msa1397740:CDS |
| AAAGATGCAGGGAAAATTGC+TGG | 0.381725 | tig0022176:+104705 | Msa1397740:CDS |
| TCCAACAAGACATAAGGTTT+TGG | 0.384795 | tig0022176:+104469 | Msa1397740:CDS |
| CGAAGGAATGTTCAAGGTTA+AGG | 0.387070 | tig0022176:+104875 | Msa1397740:CDS |
| ACCGACACTGAAAGATTAAT+AGG | 0.390230 | tig0022176:+104354 | Msa1397740:CDS |
| CTTGTCTTTGATCTTGGTGG+TGG | 0.402810 | tig0022176:+104822 | Msa1397740:CDS |
| TTTGATGCCAAACGTTTGAT+TGG | 0.402974 | tig0022176:+104423 | Msa1397740:CDS |
| GCCAAAACCTTATGTCTTGT+TGG | 0.404961 | tig0022176:-104470 | None:intergenic |
| GTTCTTGTCTTTGATCTTGG+TGG | 0.414303 | tig0022176:+104819 | Msa1397740:CDS |
| GTTCAAGGTTAAGGCCACTT+TGG | 0.441611 | tig0022176:+104884 | Msa1397740:CDS |
| TCGGTGAAGGCAACGTAAGA+AGG | 0.448873 | tig0022176:-104336 | None:intergenic |
| GCGACGACCAATCAAACGTT+TGG | 0.486511 | tig0022176:-104430 | None:intergenic |
| TGTACCAAGGTCAATGCCTA+TGG | 0.490620 | tig0022176:-104238 | None:intergenic |
| AATCAGTCCAACAAGACATA+AGG | 0.516258 | tig0022176:+104463 | Msa1397740:CDS |
| AAGGGGTGACACGGTTCCCT+TGG | 0.517703 | tig0022176:-104317 | None:intergenic |
| ACCTATTAATCTTTCAGTGT+CGG | 0.522436 | tig0022176:-104355 | None:intergenic |
| AGACAAGCTACAAAAGATGC+AGG | 0.525606 | tig0022176:+104693 | Msa1397740:CDS |
| TGTGAGTTGTTGAAGTAAGC+AGG | 0.526143 | tig0022176:-104669 | None:intergenic |
| TGTTGACGAAGGAATGTTCA+AGG | 0.538033 | tig0022176:+104869 | Msa1397740:CDS |
| CGGTGAAGGCAACGTAAGAA+GGG | 0.538770 | tig0022176:-104335 | None:intergenic |
| TTGTAATTGACAGCAATCAC+GGG | 0.544513 | tig0022176:-104525 | None:intergenic |
| TCCTTCGTCAACAGTCACTA+AGG | 0.546693 | tig0022176:-104859 | None:intergenic |
| ACCTCAAGAGATATCTTCCA+TGG | 0.553297 | tig0022176:+104569 | Msa1397740:CDS |
| TTTGTAATTGACAGCAATCA+CGG | 0.553769 | tig0022176:-104526 | None:intergenic |
| TAATCTTTCAGTGTCGGTGA+AGG | 0.565703 | tig0022176:-104349 | None:intergenic |
| TTGGGAGATACTCATTTGGG+TGG | 0.571754 | tig0022176:+104903 | Msa1397740:CDS |
| GACAAGAAAATGTGGAGAGA+AGG | 0.578701 | tig0022176:+104786 | Msa1397740:CDS |
| TATGAAATAATTCAACAAGA+CGG | 0.584129 | tig0022176:-104953 | None:intergenic |
| TGCAGCTGTAGCTTGTACCA+AGG | 0.595496 | tig0022176:-104251 | None:intergenic |
| TAAGCAATAGCAGCTGCAGT+AGG | 0.618882 | tig0022176:-104756 | None:intergenic |
| GTGATTGCTGTCAATTACAA+AGG | 0.623404 | tig0022176:+104528 | Msa1397740:CDS |
| CAACGTAAGAAGGGGTGACA+CGG | 0.629570 | tig0022176:-104326 | None:intergenic |
| AAATCCATAGGCATTGACCT+TGG | 0.630161 | tig0022176:+104234 | Msa1397740:CDS |
| AGATCATTCCAAACGACCAA+GGG | 0.630317 | tig0022176:+104301 | Msa1397740:CDS |
| GAGATCATTCCAAACGACCA+AGG | 0.630381 | tig0022176:+104300 | Msa1397740:CDS |
| ATGGTTTGGACAAGAAAATG+TGG | 0.630603 | tig0022176:+104778 | Msa1397740:CDS |
| CAAATGAGTATCTCCCAAAG+TGG | 0.637746 | tig0022176:-104898 | None:intergenic |
| TCCTTAGTGACTGTTGACGA+AGG | 0.640013 | tig0022176:+104858 | Msa1397740:CDS |
| ACCATGGAAGATATCTCTTG+AGG | 0.641800 | tig0022176:-104570 | None:intergenic |
| GACAAGCTACAAAAGATGCA+GGG | 0.645331 | tig0022176:+104694 | Msa1397740:CDS |
| GGTGAAGGCAACGTAAGAAG+GGG | 0.669245 | tig0022176:-104334 | None:intergenic |
| ATTGCAGTGTGGCGAAACAA+TGG | 0.672404 | tig0022176:+104273 | Msa1397740:CDS |
| CTTTAACTTAGACAACACCA+TGG | 0.681981 | tig0022176:-104586 | None:intergenic |
| GCTACAGCTGCATTGCAGTG+TGG | 0.691567 | tig0022176:+104262 | Msa1397740:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGTTGATTTTGATAACAATT+TGG | + | tig0022176:104926-104945 | Msa1397740:CDS | 20.0% |
| !! | TATGAAATAATTCAACAAGA+CGG | - | tig0022176:104956-104975 | None:intergenic | 20.0% |
| !!! | TGTTGATTTTGATAACAATT+TGG | + | tig0022176:104926-104945 | Msa1397740:CDS | 20.0% |
| !! | TATGAAATAATTCAACAAGA+CGG | - | tig0022176:104956-104975 | None:intergenic | 20.0% |
| !!! | ATTTTTGGCTAATTGGTTTA+TGG | - | tig0022176:104388-104407 | None:intergenic | 25.0% |
| ! | GAAATTGCTGAAACATATTT+GGG | + | tig0022176:104609-104628 | Msa1397740:CDS | 25.0% |
| !!! | ATTTTTGGCTAATTGGTTTA+TGG | - | tig0022176:104388-104407 | None:intergenic | 25.0% |
| ! | GAAATTGCTGAAACATATTT+GGG | + | tig0022176:104609-104628 | Msa1397740:CDS | 25.0% |
| ACAAGAAAAAGCAAATCCAT+AGG | + | tig0022176:104222-104241 | Msa1397740:CDS | 30.0% | |
| ACCTATTAATCTTTCAGTGT+CGG | - | tig0022176:104358-104377 | None:intergenic | 30.0% | |
| TTTGTAATTGACAGCAATCA+CGG | - | tig0022176:104529-104548 | None:intergenic | 30.0% | |
| ! | GAGGTGAAAAATGTTTTTCT+TGG | - | tig0022176:104554-104573 | None:intergenic | 30.0% |
| GGAAATTGCTGAAACATATT+TGG | + | tig0022176:104608-104627 | Msa1397740:CDS | 30.0% | |
| AATGTTCTTGTCTTTGATCT+TGG | + | tig0022176:104816-104835 | Msa1397740:CDS | 30.0% | |
| ACAAGAAAAAGCAAATCCAT+AGG | + | tig0022176:104222-104241 | Msa1397740:CDS | 30.0% | |
| ACCTATTAATCTTTCAGTGT+CGG | - | tig0022176:104358-104377 | None:intergenic | 30.0% | |
| TTTGTAATTGACAGCAATCA+CGG | - | tig0022176:104529-104548 | None:intergenic | 30.0% | |
| ! | GAGGTGAAAAATGTTTTTCT+TGG | - | tig0022176:104554-104573 | None:intergenic | 30.0% |
| GGAAATTGCTGAAACATATT+TGG | + | tig0022176:104608-104627 | Msa1397740:CDS | 30.0% | |
| AATGTTCTTGTCTTTGATCT+TGG | + | tig0022176:104816-104835 | Msa1397740:CDS | 30.0% | |
| ACCGACACTGAAAGATTAAT+AGG | + | tig0022176:104354-104373 | Msa1397740:CDS | 35.0% | |
| !!! | TGTGTGGATTTTTGGCTAAT+TGG | - | tig0022176:104395-104414 | None:intergenic | 35.0% |
| !!! | AATGGTGTTGTGTGGATTTT+TGG | - | tig0022176:104403-104422 | None:intergenic | 35.0% |
| CAAACGTTTGGCATCAAAAA+TGG | - | tig0022176:104421-104440 | None:intergenic | 35.0% | |
| TTTGATGCCAAACGTTTGAT+TGG | + | tig0022176:104423-104442 | Msa1397740:CDS | 35.0% | |
| ! | TTATGTCTTGTTGGACTGAT+TGG | - | tig0022176:104464-104483 | None:intergenic | 35.0% |
| AATCAGTCCAACAAGACATA+AGG | + | tig0022176:104463-104482 | Msa1397740:CDS | 35.0% | |
| ! | TCCAACAAGACATAAGGTTT+TGG | + | tig0022176:104469-104488 | Msa1397740:CDS | 35.0% |
| !! | CATAAGGTTTTGGCCTTTTA+AGG | + | tig0022176:104479-104498 | Msa1397740:CDS | 35.0% |
| ! | TGGTTTGGAACAACCTTAAA+AGG | - | tig0022176:104495-104514 | None:intergenic | 35.0% |
| TTGTAATTGACAGCAATCAC+GGG | - | tig0022176:104528-104547 | None:intergenic | 35.0% | |
| GTGATTGCTGTCAATTACAA+AGG | + | tig0022176:104528-104547 | Msa1397740:CDS | 35.0% | |
| ! | CTTTAACTTAGACAACACCA+TGG | - | tig0022176:104589-104608 | None:intergenic | 35.0% |
| !! | CATGGTGTTGTCTAAGTTAA+AGG | + | tig0022176:104587-104606 | Msa1397740:CDS | 35.0% |
| !!! | TTGCTGGTTTTAATGTGATG+AGG | + | tig0022176:104721-104740 | Msa1397740:CDS | 35.0% |
| ! | ATGGTTTGGACAAGAAAATG+TGG | + | tig0022176:104778-104797 | Msa1397740:CDS | 35.0% |
| ! | ACTTTGGGAGATACTCATTT+GGG | + | tig0022176:104900-104919 | Msa1397740:CDS | 35.0% |
| ACCGACACTGAAAGATTAAT+AGG | + | tig0022176:104354-104373 | Msa1397740:CDS | 35.0% | |
| !!! | TGTGTGGATTTTTGGCTAAT+TGG | - | tig0022176:104395-104414 | None:intergenic | 35.0% |
| !!! | AATGGTGTTGTGTGGATTTT+TGG | - | tig0022176:104403-104422 | None:intergenic | 35.0% |
| CAAACGTTTGGCATCAAAAA+TGG | - | tig0022176:104421-104440 | None:intergenic | 35.0% | |
| TTTGATGCCAAACGTTTGAT+TGG | + | tig0022176:104423-104442 | Msa1397740:CDS | 35.0% | |
| ! | TTATGTCTTGTTGGACTGAT+TGG | - | tig0022176:104464-104483 | None:intergenic | 35.0% |
| AATCAGTCCAACAAGACATA+AGG | + | tig0022176:104463-104482 | Msa1397740:CDS | 35.0% | |
| ! | TCCAACAAGACATAAGGTTT+TGG | + | tig0022176:104469-104488 | Msa1397740:CDS | 35.0% |
| !! | CATAAGGTTTTGGCCTTTTA+AGG | + | tig0022176:104479-104498 | Msa1397740:CDS | 35.0% |
| ! | TGGTTTGGAACAACCTTAAA+AGG | - | tig0022176:104495-104514 | None:intergenic | 35.0% |
| TTGTAATTGACAGCAATCAC+GGG | - | tig0022176:104528-104547 | None:intergenic | 35.0% | |
| GTGATTGCTGTCAATTACAA+AGG | + | tig0022176:104528-104547 | Msa1397740:CDS | 35.0% | |
| ! | CTTTAACTTAGACAACACCA+TGG | - | tig0022176:104589-104608 | None:intergenic | 35.0% |
| !! | CATGGTGTTGTCTAAGTTAA+AGG | + | tig0022176:104587-104606 | Msa1397740:CDS | 35.0% |
| !!! | TTGCTGGTTTTAATGTGATG+AGG | + | tig0022176:104721-104740 | Msa1397740:CDS | 35.0% |
| ! | ATGGTTTGGACAAGAAAATG+TGG | + | tig0022176:104778-104797 | Msa1397740:CDS | 35.0% |
| ! | ACTTTGGGAGATACTCATTT+GGG | + | tig0022176:104900-104919 | Msa1397740:CDS | 35.0% |
| !! | AAATCCATAGGCATTGACCT+TGG | + | tig0022176:104234-104253 | Msa1397740:CDS | 40.0% |
| AGATCATTCCAAACGACCAA+GGG | + | tig0022176:104301-104320 | Msa1397740:CDS | 40.0% | |
| !! | TAATCTTTCAGTGTCGGTGA+AGG | - | tig0022176:104352-104371 | None:intergenic | 40.0% |
| !! | GCATCAAAAATGGTGTTGTG+TGG | - | tig0022176:104411-104430 | None:intergenic | 40.0% |
| GCCAAAACCTTATGTCTTGT+TGG | - | tig0022176:104473-104492 | None:intergenic | 40.0% | |
| ACCTCAAGAGATATCTTCCA+TGG | + | tig0022176:104569-104588 | Msa1397740:CDS | 40.0% | |
| ACCATGGAAGATATCTCTTG+AGG | - | tig0022176:104573-104592 | None:intergenic | 40.0% | |
| TGTGAGTTGTTGAAGTAAGC+AGG | - | tig0022176:104672-104691 | None:intergenic | 40.0% | |
| AGACAAGCTACAAAAGATGC+AGG | + | tig0022176:104693-104712 | Msa1397740:CDS | 40.0% | |
| GACAAGCTACAAAAGATGCA+GGG | + | tig0022176:104694-104713 | Msa1397740:CDS | 40.0% | |
| AAAGATGCAGGGAAAATTGC+TGG | + | tig0022176:104705-104724 | Msa1397740:CDS | 40.0% | |
| AGCTGCTATTGCTTATGGTT+TGG | + | tig0022176:104764-104783 | Msa1397740:CDS | 40.0% | |
| GACAAGAAAATGTGGAGAGA+AGG | + | tig0022176:104786-104805 | Msa1397740:CDS | 40.0% | |
| GTTCTTGTCTTTGATCTTGG+TGG | + | tig0022176:104819-104838 | Msa1397740:CDS | 40.0% | |
| TGTTGACGAAGGAATGTTCA+AGG | + | tig0022176:104869-104888 | Msa1397740:CDS | 40.0% | |
| CGAAGGAATGTTCAAGGTTA+AGG | + | tig0022176:104875-104894 | Msa1397740:CDS | 40.0% | |
| ! | TTCAAGGTTAAGGCCACTTT+GGG | + | tig0022176:104885-104904 | Msa1397740:CDS | 40.0% |
| CAAATGAGTATCTCCCAAAG+TGG | - | tig0022176:104901-104920 | None:intergenic | 40.0% | |
| ! | CACTTTGGGAGATACTCATT+TGG | + | tig0022176:104899-104918 | Msa1397740:CDS | 40.0% |
| !! | AAATCCATAGGCATTGACCT+TGG | + | tig0022176:104234-104253 | Msa1397740:CDS | 40.0% |
| AGATCATTCCAAACGACCAA+GGG | + | tig0022176:104301-104320 | Msa1397740:CDS | 40.0% | |
| !! | TAATCTTTCAGTGTCGGTGA+AGG | - | tig0022176:104352-104371 | None:intergenic | 40.0% |
| !! | GCATCAAAAATGGTGTTGTG+TGG | - | tig0022176:104411-104430 | None:intergenic | 40.0% |
| GCCAAAACCTTATGTCTTGT+TGG | - | tig0022176:104473-104492 | None:intergenic | 40.0% | |
| ACCTCAAGAGATATCTTCCA+TGG | + | tig0022176:104569-104588 | Msa1397740:CDS | 40.0% | |
| ACCATGGAAGATATCTCTTG+AGG | - | tig0022176:104573-104592 | None:intergenic | 40.0% | |
| TGTGAGTTGTTGAAGTAAGC+AGG | - | tig0022176:104672-104691 | None:intergenic | 40.0% | |
| AGACAAGCTACAAAAGATGC+AGG | + | tig0022176:104693-104712 | Msa1397740:CDS | 40.0% | |
| GACAAGCTACAAAAGATGCA+GGG | + | tig0022176:104694-104713 | Msa1397740:CDS | 40.0% | |
| AAAGATGCAGGGAAAATTGC+TGG | + | tig0022176:104705-104724 | Msa1397740:CDS | 40.0% | |
| AGCTGCTATTGCTTATGGTT+TGG | + | tig0022176:104764-104783 | Msa1397740:CDS | 40.0% | |
| GACAAGAAAATGTGGAGAGA+AGG | + | tig0022176:104786-104805 | Msa1397740:CDS | 40.0% | |
| GTTCTTGTCTTTGATCTTGG+TGG | + | tig0022176:104819-104838 | Msa1397740:CDS | 40.0% | |
| TGTTGACGAAGGAATGTTCA+AGG | + | tig0022176:104869-104888 | Msa1397740:CDS | 40.0% | |
| CGAAGGAATGTTCAAGGTTA+AGG | + | tig0022176:104875-104894 | Msa1397740:CDS | 40.0% | |
| ! | TTCAAGGTTAAGGCCACTTT+GGG | + | tig0022176:104885-104904 | Msa1397740:CDS | 40.0% |
| CAAATGAGTATCTCCCAAAG+TGG | - | tig0022176:104901-104920 | None:intergenic | 40.0% | |
| ! | CACTTTGGGAGATACTCATT+TGG | + | tig0022176:104899-104918 | Msa1397740:CDS | 40.0% |
| TGTACCAAGGTCAATGCCTA+TGG | - | tig0022176:104241-104260 | None:intergenic | 45.0% | |
| ATTGCAGTGTGGCGAAACAA+TGG | + | tig0022176:104273-104292 | Msa1397740:CDS | 45.0% | |
| GAGATCATTCCAAACGACCA+AGG | + | tig0022176:104300-104319 | Msa1397740:CDS | 45.0% | |
| ACGGGTTTGTCTTTGTGGTT+TGG | - | tig0022176:104510-104529 | None:intergenic | 45.0% | |
| CAATCACGGGTTTGTCTTTG+TGG | - | tig0022176:104515-104534 | None:intergenic | 45.0% | |
| TAAGCAATAGCAGCTGCAGT+AGG | - | tig0022176:104759-104778 | None:intergenic | 45.0% | |
| ACTGCAGCTGCTATTGCTTA+TGG | + | tig0022176:104759-104778 | Msa1397740:CDS | 45.0% | |
| CTTGTCTTTGATCTTGGTGG+TGG | + | tig0022176:104822-104841 | Msa1397740:CDS | 45.0% | |
| TCCTTAGTGACTGTTGACGA+AGG | + | tig0022176:104858-104877 | Msa1397740:CDS | 45.0% | |
| TCCTTCGTCAACAGTCACTA+AGG | - | tig0022176:104862-104881 | None:intergenic | 45.0% | |
| GTTCAAGGTTAAGGCCACTT+TGG | + | tig0022176:104884-104903 | Msa1397740:CDS | 45.0% | |
| TTGGGAGATACTCATTTGGG+TGG | + | tig0022176:104903-104922 | Msa1397740:CDS | 45.0% | |
| TGTACCAAGGTCAATGCCTA+TGG | - | tig0022176:104241-104260 | None:intergenic | 45.0% | |
| ATTGCAGTGTGGCGAAACAA+TGG | + | tig0022176:104273-104292 | Msa1397740:CDS | 45.0% | |
| GAGATCATTCCAAACGACCA+AGG | + | tig0022176:104300-104319 | Msa1397740:CDS | 45.0% | |
| ACGGGTTTGTCTTTGTGGTT+TGG | - | tig0022176:104510-104529 | None:intergenic | 45.0% | |
| CAATCACGGGTTTGTCTTTG+TGG | - | tig0022176:104515-104534 | None:intergenic | 45.0% | |
| TAAGCAATAGCAGCTGCAGT+AGG | - | tig0022176:104759-104778 | None:intergenic | 45.0% | |
| ACTGCAGCTGCTATTGCTTA+TGG | + | tig0022176:104759-104778 | Msa1397740:CDS | 45.0% | |
| CTTGTCTTTGATCTTGGTGG+TGG | + | tig0022176:104822-104841 | Msa1397740:CDS | 45.0% | |
| TCCTTAGTGACTGTTGACGA+AGG | + | tig0022176:104858-104877 | Msa1397740:CDS | 45.0% | |
| TCCTTCGTCAACAGTCACTA+AGG | - | tig0022176:104862-104881 | None:intergenic | 45.0% | |
| GTTCAAGGTTAAGGCCACTT+TGG | + | tig0022176:104884-104903 | Msa1397740:CDS | 45.0% | |
| TTGGGAGATACTCATTTGGG+TGG | + | tig0022176:104903-104922 | Msa1397740:CDS | 45.0% | |
| ! | TGCAGCTGTAGCTTGTACCA+AGG | - | tig0022176:104254-104273 | None:intergenic | 50.0% |
| CAACGTAAGAAGGGGTGACA+CGG | - | tig0022176:104329-104348 | None:intergenic | 50.0% | |
| GGTGAAGGCAACGTAAGAAG+GGG | - | tig0022176:104337-104356 | None:intergenic | 50.0% | |
| CGGTGAAGGCAACGTAAGAA+GGG | - | tig0022176:104338-104357 | None:intergenic | 50.0% | |
| TCGGTGAAGGCAACGTAAGA+AGG | - | tig0022176:104339-104358 | None:intergenic | 50.0% | |
| GCGACGACCAATCAAACGTT+TGG | - | tig0022176:104433-104452 | None:intergenic | 50.0% | |
| ! | TGCAGCTGTAGCTTGTACCA+AGG | - | tig0022176:104254-104273 | None:intergenic | 50.0% |
| CAACGTAAGAAGGGGTGACA+CGG | - | tig0022176:104329-104348 | None:intergenic | 50.0% | |
| GGTGAAGGCAACGTAAGAAG+GGG | - | tig0022176:104337-104356 | None:intergenic | 50.0% | |
| CGGTGAAGGCAACGTAAGAA+GGG | - | tig0022176:104338-104357 | None:intergenic | 50.0% | |
| TCGGTGAAGGCAACGTAAGA+AGG | - | tig0022176:104339-104358 | None:intergenic | 50.0% | |
| GCGACGACCAATCAAACGTT+TGG | - | tig0022176:104433-104452 | None:intergenic | 50.0% | |
| GCTACAGCTGCATTGCAGTG+TGG | + | tig0022176:104262-104281 | Msa1397740:CDS | 55.0% | |
| ACACGGTTCCCTTGGTCGTT+TGG | - | tig0022176:104312-104331 | None:intergenic | 55.0% | |
| GCTACAGCTGCATTGCAGTG+TGG | + | tig0022176:104262-104281 | Msa1397740:CDS | 55.0% | |
| ACACGGTTCCCTTGGTCGTT+TGG | - | tig0022176:104312-104331 | None:intergenic | 55.0% | |
| AAGGGGTGACACGGTTCCCT+TGG | - | tig0022176:104320-104339 | None:intergenic | 60.0% | |
| AAGGGGTGACACGGTTCCCT+TGG | - | tig0022176:104320-104339 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0022176 | gene | 104216 | 104977 | 104216 | ID=Msa1397740;Name=Msa1397740 |
| tig0022176 | mRNA | 104216 | 104977 | 104216 | ID=Msa1397740-mRNA-1;Parent=Msa1397740;Name=Msa1397740-mRNA-1;_AED=0.36;_eAED=0.36;_QI=0|-1|0|1|-1|1|1|0|254 |
| tig0022176 | exon | 104216 | 104977 | 104216 | ID=Msa1397740-mRNA-1:exon:16246;Parent=Msa1397740-mRNA-1 |
| tig0022176 | CDS | 104216 | 104977 | 104216 | ID=Msa1397740-mRNA-1:cds;Parent=Msa1397740-mRNA-1 |
| Gene Sequence |
| Protein sequence |
