Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0198230 | XP_003594432.1 | 86.482 | 577 | 37 | 3 | 1 | 538 | 1 | 575 | 0.0 | 975 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0198230 | sp|Q9M1G5|NDC80_ARATH | 43.178 | 535 | 261 | 6 | 24 | 520 | 33 | 562 | 7.07e-139 | 416 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0198230 | G7IFT2 | 86.482 | 577 | 37 | 3 | 1 | 538 | 1 | 575 | 0.0 | 975 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0198130 | Msa0198230 | 0.957449 | 2.641049e-115 | -8.615850e-47 |
| Msa0198230 | Msa0278330 | 0.923642 | 2.029717e-89 | -8.615850e-47 |
| Msa0198230 | Msa0278350 | 0.967419 | 2.984304e-127 | -8.615850e-47 |
| Msa0198230 | Msa0278370 | 0.933580 | 1.510966e-95 | -8.615850e-47 |
| Msa0198230 | Msa0278450 | 0.903237 | 4.267755e-79 | -8.615850e-47 |
| Msa0198230 | Msa0328150 | 0.909174 | 7.620099e-82 | -8.615850e-47 |
| Msa0198230 | Msa0483100 | 0.804698 | 1.906611e-49 | -8.615850e-47 |
| Msa0198230 | Msa1170350 | 0.865545 | 5.462508e-65 | -8.615850e-47 |
| Msa0198230 | Msa1320670 | 0.801683 | 8.022286e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0198230 | MtrunA17_Chr2g0291491 | 86.482 | 577 | 37 | 3 | 1 | 538 | 1 | 575 | 0.0 | 975 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0198230 | AT3G54630.1 | 43.178 | 535 | 261 | 6 | 24 | 520 | 33 | 562 | 7.19e-140 | 416 |
Find 156 sgRNAs with CRISPR-Local
Find 373 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGATTTATTAAGTTTAAA+AGG | 0.160827 | 2_1:+16831849 | None:intergenic |
| GGAGTTCGGTGAGGAAAATT+AGG | 0.203771 | 2_1:+16831934 | None:intergenic |
| ATGTATACAAGTATATTATT+TGG | 0.244840 | 2_1:-16826926 | Msa0198230:three_prime_UTR |
| TGGAAGGTAGGAAGTGTCTT+TGG | 0.259688 | 2_1:+16832166 | None:intergenic |
| CATAAGATAATTGAGGAGTT+TGG | 0.260608 | 2_1:-16831442 | Msa0198230:CDS |
| TTGGCGACGGTGGGTGGCGG+TGG | 0.276135 | 2_1:+16832190 | None:intergenic |
| GAGAAGTTCGGTGGTGAAAT+TGG | 0.292249 | 2_1:-16830621 | Msa0198230:CDS |
| TGAGCCGTTGGAGAGGGTTT+TGG | 0.311584 | 2_1:-16831410 | Msa0198230:CDS |
| AAGGGCCTGGTTGCAATCTA+TGG | 0.332441 | 2_1:+16831138 | None:intergenic |
| ATAAGATAATTGAGGAGTTT+GGG | 0.338703 | 2_1:-16831441 | Msa0198230:CDS |
| TTCAGCAGGCGTGGTTCCCT+TGG | 0.339122 | 2_1:+16830709 | None:intergenic |
| GGAAGGTAGGAAGTGTCTTT+GGG | 0.347036 | 2_1:+16832167 | None:intergenic |
| GGCCATTGATGCGGGGTAGC+AGG | 0.360117 | 2_1:+16831817 | None:intergenic |
| CAATGCTTTGTCTTATTCAC+TGG | 0.360486 | 2_1:-16831792 | Msa0198230:CDS |
| TGATCATGATGTGGGCATTA+TGG | 0.365375 | 2_1:-16828055 | Msa0198230:CDS |
| GTCTGTTGCTGAGGAGAAAC+TGG | 0.366375 | 2_1:-16831587 | Msa0198230:CDS |
| TGACGAGGCTATTCTTGATA+TGG | 0.379772 | 2_1:-16831644 | Msa0198230:CDS |
| GTCTTTGGGTTGGCGACGGT+GGG | 0.391931 | 2_1:+16832181 | None:intergenic |
| GAGTTCGGTGAGGAAAATTA+GGG | 0.399786 | 2_1:+16831935 | None:intergenic |
| TGGTTGAGAGGGGTTGGTGG+TGG | 0.400749 | 2_1:+16832146 | None:intergenic |
| GTCCGACATCTTCTTAGCTT+CGG | 0.401875 | 2_1:+16828092 | None:intergenic |
| GGCATCTGAATTGAAGTTGC+AGG | 0.406818 | 2_1:-16827486 | Msa0198230:CDS |
| AATGTGGTTAATTGAAAGTA+GGG | 0.409020 | 2_1:-16827161 | Msa0198230:three_prime_UTR |
| TTGAAGAGTTTGAGAAGTAA+AGG | 0.409288 | 2_1:+16831876 | None:intergenic |
| GGGTTGGCGACGGTGGGTGG+CGG | 0.420965 | 2_1:+16832187 | None:intergenic |
| TGAATAAGACAAAGCATTGA+AGG | 0.425794 | 2_1:+16831796 | None:intergenic |
| TGTTGAGTTGGAGGCGCAAT+TGG | 0.435358 | 2_1:-16831545 | Msa0198230:CDS |
| TCACTAGCTGGAAACTCAAA+TGG | 0.437352 | 2_1:-16828160 | Msa0198230:intron |
| CGGAACTTGCTAGGAATGCT+TGG | 0.439222 | 2_1:-16831225 | Msa0198230:CDS |
| GAATGTGGTTAATTGAAAGT+AGG | 0.443207 | 2_1:-16827162 | Msa0198230:three_prime_UTR |
| AGGGGTTGGTGGTGGAAGGT+AGG | 0.444653 | 2_1:+16832154 | None:intergenic |
| TGAGAAAGAGAAGGGTGTGT+TGG | 0.446077 | 2_1:-16831485 | Msa0198230:CDS |
| TTGATTTATTAAGTTTAAAA+GGG | 0.447323 | 2_1:+16831850 | None:intergenic |
| TGCGATTGCGGATTGTTGAT+AGG | 0.448386 | 2_1:+16832043 | None:intergenic |
| GAAATTGTGAGAGGCGAGGA+AGG | 0.448991 | 2_1:+16832010 | None:intergenic |
| AACCACGCCTGCTGAAATCA+TGG | 0.451028 | 2_1:-16830702 | Msa0198230:CDS |
| TAGATTGCAACCAGGCCCTT+AGG | 0.451842 | 2_1:-16831135 | Msa0198230:CDS |
| TACGTGCATCATTAGATTGA+AGG | 0.458764 | 2_1:-16826987 | Msa0198230:three_prime_UTR |
| TGAGAGGGGTTGGTGGTGGA+AGG | 0.460898 | 2_1:+16832150 | None:intergenic |
| TGTGCTTCTAGGTTGAAGAT+TGG | 0.463038 | 2_1:-16830758 | Msa0198230:intron |
| GGCGGAGAAGGAGAAGCAAT+TGG | 0.464127 | 2_1:-16831389 | Msa0198230:CDS |
| TCAGCAGGCGTGGTTCCCTT+GGG | 0.464966 | 2_1:+16830710 | None:intergenic |
| AACGGGAAATTCAAGGAGTT+CGG | 0.466119 | 2_1:+16831920 | None:intergenic |
| AGAGGCAGCTGAGGTTCTAA+AGG | 0.469279 | 2_1:-16828028 | Msa0198230:intron |
| CGCGCATAAGATCAAAGACT+TGG | 0.473475 | 2_1:-16831170 | Msa0198230:CDS |
| TGTCTTTGGGTTGGCGACGG+TGG | 0.473790 | 2_1:+16832180 | None:intergenic |
| AGAGGCGAGGAAGGAGTTGA+TGG | 0.475835 | 2_1:+16832019 | None:intergenic |
| GAGGGGATTCCGACGGAGGA+AGG | 0.476947 | 2_1:+16832089 | None:intergenic |
| TGAGGAAAATTAGGGTTTCG+TGG | 0.477520 | 2_1:+16831943 | None:intergenic |
| ACCCTGCTACCCCGCATCAA+TGG | 0.479729 | 2_1:-16831819 | Msa0198230:CDS |
| TCGCGGTGGTTGAGAGGGGT+TGG | 0.479818 | 2_1:+16832140 | None:intergenic |
| TGCTTGGGAGGAAAAGTGTT+GGG | 0.483018 | 2_1:-16831209 | Msa0198230:CDS |
| GCATTGAAGGCCATTGATGC+GGG | 0.484798 | 2_1:+16831809 | None:intergenic |
| TGGCGACGGTGGGTGGCGGT+GGG | 0.488231 | 2_1:+16832191 | None:intergenic |
| GGTGGTGAAATTGGAAGAGT+TGG | 0.490182 | 2_1:-16830612 | Msa0198230:CDS |
| CGGAATCGCGGTGGTTGAGA+GGG | 0.491653 | 2_1:+16832135 | None:intergenic |
| CGGTGGTTGAGAGGGGTTGG+TGG | 0.491912 | 2_1:+16832143 | None:intergenic |
| TTTGGGTTGGCGACGGTGGG+TGG | 0.492725 | 2_1:+16832184 | None:intergenic |
| GGATGTGGAGAGGATGAAGA+AGG | 0.500189 | 2_1:-16831281 | Msa0198230:CDS |
| TGGGTCAAGGATTGAGCCGT+TGG | 0.504005 | 2_1:-16831422 | Msa0198230:CDS |
| TCGTGGATTTGTTTAGCGGA+AGG | 0.505891 | 2_1:+16831960 | None:intergenic |
| GGAGAAGCAATTGGAGGCGA+AGG | 0.507967 | 2_1:-16831380 | Msa0198230:CDS |
| GCAATTGGAGGCGAAGGTGG+TGG | 0.508621 | 2_1:-16831374 | Msa0198230:CDS |
| GCAAACTGTTGTTGAGTTGG+AGG | 0.509033 | 2_1:-16831554 | Msa0198230:CDS |
| GAGATCCGCGCCGTCTAAGA+AGG | 0.509647 | 2_1:-16831515 | Msa0198230:CDS |
| TCAAGCTCATCCTTCTTAGA+CGG | 0.509935 | 2_1:+16831505 | None:intergenic |
| CTGGTGAGGCGGAACTTGCT+AGG | 0.511152 | 2_1:-16831234 | Msa0198230:CDS |
| GAGGATTGTTGAGGAGAATG+AGG | 0.511952 | 2_1:-16831344 | Msa0198230:CDS |
| CACGCTGTTGAGAGGGATGC+TGG | 0.512009 | 2_1:-16831253 | Msa0198230:CDS |
| AGCAGCCGCCCTTCCTCCGT+CGG | 0.512411 | 2_1:-16832098 | Msa0198230:CDS |
| GTCTTTGTAAAGGTCGAATG+AGG | 0.513877 | 2_1:+16832070 | None:intergenic |
| CGAAGGTGGTGGAGAATGAG+AGG | 0.518233 | 2_1:-16831363 | Msa0198230:CDS |
| AGGGGATTCCGACGGAGGAA+GGG | 0.518465 | 2_1:+16832090 | None:intergenic |
| TGAGTTGGAGGCGCAATTGG+AGG | 0.523011 | 2_1:-16831542 | Msa0198230:CDS |
| GATAGGAACGGTCTTTGTAA+AGG | 0.523078 | 2_1:+16832060 | None:intergenic |
| TGAGCAAACTGTTGTTGAGT+TGG | 0.525689 | 2_1:-16831557 | Msa0198230:CDS |
| AAAATATAGTTATATATTGG+AGG | 0.526340 | 2_1:-16827288 | Msa0198230:CDS |
| TCAGCATAGGATTCAAGCAC+AGG | 0.527543 | 2_1:+16830653 | None:intergenic |
| GGAACTTGCTAGGAATGCTT+GGG | 0.527690 | 2_1:-16831224 | Msa0198230:CDS |
| CTCAAAGTATAAAGAACATG+TGG | 0.527765 | 2_1:-16827393 | Msa0198230:CDS |
| GCCATTGATGCGGGGTAGCA+GGG | 0.530312 | 2_1:+16831818 | None:intergenic |
| GTGGATTTGTTTAGCGGAAG+GGG | 0.530909 | 2_1:+16831962 | None:intergenic |
| GGATGAGCTTGAGAAAGAGA+AGG | 0.531000 | 2_1:-16831494 | Msa0198230:CDS |
| AAGTGTCTTTGGGTTGGCGA+CGG | 0.533107 | 2_1:+16832177 | None:intergenic |
| CCACATCATGATCAGCTAGC+TGG | 0.533202 | 2_1:+16828064 | None:intergenic |
| CGTGGATTTGTTTAGCGGAA+GGG | 0.535425 | 2_1:+16831961 | None:intergenic |
| GGTTTCGTGGATTTGTTTAG+CGG | 0.537126 | 2_1:+16831956 | None:intergenic |
| TCTCTTGATGTCATCAGCAT+AGG | 0.537512 | 2_1:+16830640 | None:intergenic |
| GATGAGCTTGAGAAAGAGAA+GGG | 0.537514 | 2_1:-16831493 | Msa0198230:CDS |
| TCAAAACCCATGATTTCAGC+AGG | 0.541601 | 2_1:+16830695 | None:intergenic |
| GGAGTTGATGGTTGCGATTG+CGG | 0.543181 | 2_1:+16832031 | None:intergenic |
| GCATAAGATCAAAGACTTGG+AGG | 0.544967 | 2_1:-16831167 | Msa0198230:CDS |
| GAAAATGCTGCTAGGCTCGA+GGG | 0.547420 | 2_1:-16830566 | Msa0198230:CDS |
| TCGGAATCGCGGTGGTTGAG+AGG | 0.548735 | 2_1:+16832134 | None:intergenic |
| AAGGATTGAGCCGTTGGAGA+GGG | 0.549405 | 2_1:-16831416 | Msa0198230:CDS |
| TAAGTTTCATAAGATAATTG+AGG | 0.549470 | 2_1:-16831449 | Msa0198230:CDS |
| ATGCTTGGGAGGAAAAGTGT+TGG | 0.549756 | 2_1:-16831210 | Msa0198230:CDS |
| TGATGACATCAAGAGAAGTT+CGG | 0.549998 | 2_1:-16830633 | Msa0198230:CDS |
| GTTGGAGGCGCAATTGGAGG+AGG | 0.550019 | 2_1:-16831539 | Msa0198230:CDS |
| GAGAAGATTTGAAAGAGATG+TGG | 0.554044 | 2_1:+16831988 | None:intergenic |
| TGAGGAGCTTAAGACGAAAG+TGG | 0.557541 | 2_1:-16831326 | Msa0198230:CDS |
| ACCCATGATTTCAGCAGGCG+TGG | 0.557805 | 2_1:+16830700 | None:intergenic |
| ATTTGTTTAGCGGAAGGGGA+AGG | 0.562432 | 2_1:+16831966 | None:intergenic |
| CGAAAATGCTGCTAGGCTCG+AGG | 0.564769 | 2_1:-16830567 | Msa0198230:CDS |
| GGTAGGAAGTGTCTTTGGGT+TGG | 0.569598 | 2_1:+16832171 | None:intergenic |
| AGCATTGAAGGCCATTGATG+CGG | 0.572473 | 2_1:+16831808 | None:intergenic |
| AAAGAGAAGGGTGTGTTGGA+AGG | 0.573060 | 2_1:-16831481 | Msa0198230:CDS |
| GGATTCCGACGGAGGAAGGG+CGG | 0.574947 | 2_1:+16832093 | None:intergenic |
| TCAGTATGTGTTGAATCCCA+AGG | 0.575703 | 2_1:-16830726 | Msa0198230:CDS |
| TCATGAGAAGTCTGTTGCTG+AGG | 0.576689 | 2_1:-16831596 | Msa0198230:CDS |
| CGAGGCTATTCTTGATATGG+AGG | 0.579105 | 2_1:-16831641 | Msa0198230:CDS |
| TCTTTGTAAAGGTCGAATGA+GGG | 0.585965 | 2_1:+16832071 | None:intergenic |
| GCTGCTGACGAGACTGATGT+CGG | 0.586008 | 2_1:+16832115 | None:intergenic |
| GAAGCAATTGGAGGCGAAGG+TGG | 0.589483 | 2_1:-16831377 | Msa0198230:CDS |
| AACGTTTCAGAGATTAGAAG+CGG | 0.589920 | 2_1:-16827365 | Msa0198230:CDS |
| TAATTGAGGAGTTTGGGTCA+AGG | 0.591021 | 2_1:-16831435 | Msa0198230:CDS |
| TGTGGAAATTGTGAGAGGCG+AGG | 0.592842 | 2_1:+16832006 | None:intergenic |
| GGAGTTGCACGCTGTTGAGA+GGG | 0.593133 | 2_1:-16831260 | Msa0198230:CDS |
| ACCACGCCTGCTGAAATCAT+GGG | 0.594180 | 2_1:-16830701 | Msa0198230:CDS |
| ATTGCAACCAGGCCCTTAGG+AGG | 0.594319 | 2_1:-16831132 | Msa0198230:intron |
| AGGAGTTGCACGCTGTTGAG+AGG | 0.594789 | 2_1:-16831261 | Msa0198230:CDS |
| CCAGCTAGCTGATCATGATG+TGG | 0.595217 | 2_1:-16828064 | Msa0198230:CDS |
| GAAGAAATTCAAATGCATGC+CGG | 0.605310 | 2_1:-16827443 | Msa0198230:CDS |
| TTGCGGATTGTTGATAGGAA+CGG | 0.605871 | 2_1:+16832048 | None:intergenic |
| GGAGAAGGAGAAGCAATTGG+AGG | 0.606698 | 2_1:-16831386 | Msa0198230:CDS |
| TGTTGAGAGGGATGCTGGTG+AGG | 0.608981 | 2_1:-16831248 | Msa0198230:CDS |
| CAAGGATTGAGCCGTTGGAG+AGG | 0.615648 | 2_1:-16831417 | Msa0198230:CDS |
| GGAATCGCGGTGGTTGAGAG+GGG | 0.616778 | 2_1:+16832136 | None:intergenic |
| CTTTGTAAAGGTCGAATGAG+GGG | 0.618950 | 2_1:+16832072 | None:intergenic |
| ACTTGCTAGGAATGCTTGGG+AGG | 0.620037 | 2_1:-16831221 | Msa0198230:CDS |
| AGTTCGCCGAAAATGCTGCT+AGG | 0.620707 | 2_1:-16830574 | Msa0198230:CDS |
| CAGTATGTGTTGAATCCCAA+GGG | 0.630232 | 2_1:-16830725 | Msa0198230:CDS |
| CATGATAAAGAAAGAAACAC+AGG | 0.630583 | 2_1:-16828136 | Msa0198230:CDS |
| CTCATCCTTCTTAGACGGCG+CGG | 0.632977 | 2_1:+16831510 | None:intergenic |
| TCAAAGTATAAAGAACATGT+GGG | 0.633300 | 2_1:-16827392 | Msa0198230:CDS |
| ACGTTTCAGAGATTAGAAGC+GGG | 0.634715 | 2_1:-16827364 | Msa0198230:CDS |
| TATGGAAAGAGAGGCAGCTG+AGG | 0.635705 | 2_1:-16828037 | Msa0198230:CDS |
| CAGCTAGCTGATCATGATGT+GGG | 0.635721 | 2_1:-16828063 | Msa0198230:CDS |
| TGTGGGCATTATGGAAAGAG+AGG | 0.640887 | 2_1:-16828046 | Msa0198230:CDS |
| AAAATGCTGCTAGGCTCGAG+GGG | 0.643960 | 2_1:-16830565 | Msa0198230:CDS |
| GAATGAGGGGATTCCGACGG+AGG | 0.648475 | 2_1:+16832085 | None:intergenic |
| CGAGACTGATGTCGGAATCG+CGG | 0.650272 | 2_1:+16832123 | None:intergenic |
| TCATTAGATTGAAGGCACAA+TGG | 0.652260 | 2_1:-16826979 | Msa0198230:three_prime_UTR |
| TTAATGCGAGGGATGTGGAG+AGG | 0.655098 | 2_1:-16831291 | Msa0198230:CDS |
| TCCGCCAAAACCCTCTCCAA+CGG | 0.655375 | 2_1:+16831406 | None:intergenic |
| GTCGAATGAGGGGATTCCGA+CGG | 0.660588 | 2_1:+16832082 | None:intergenic |
| GACTGATGTCGGAATCGCGG+TGG | 0.661612 | 2_1:+16832126 | None:intergenic |
| TGCCGAAGCTAAGAAGATGT+CGG | 0.664082 | 2_1:-16828094 | Msa0198230:CDS |
| GGAGAATGAGAGGATTGTTG+AGG | 0.664358 | 2_1:-16831353 | Msa0198230:CDS |
| GAAGGCACAATGGCACAATG+AGG | 0.674074 | 2_1:-16826969 | Msa0198230:three_prime_UTR |
| CATTGAAGGCCATTGATGCG+GGG | 0.679311 | 2_1:+16831810 | None:intergenic |
| TGAGAGGGATGCTGGTGAGG+CGG | 0.679707 | 2_1:-16831245 | Msa0198230:CDS |
| TCTCTCCATAGATTGCAACC+AGG | 0.696902 | 2_1:-16831143 | Msa0198230:CDS |
| TGACATCAAGAGAAGTTCGG+TGG | 0.704206 | 2_1:-16830630 | Msa0198230:CDS |
| AGAGATGTGGAAATTGTGAG+AGG | 0.708472 | 2_1:+16832001 | None:intergenic |
| GAAATTCAAGGAGTTCGGTG+AGG | 0.740280 | 2_1:+16831925 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTGATTTATTAAGTTTAAAA+GGG | + | chr2_1:16827126-16827145 | None:intergenic | 10.0% |
| !!! | ATTGATTTATTAAGTTTAAA+AGG | + | chr2_1:16827127-16827146 | None:intergenic | 10.0% |
| !!! | AATTATCTTAATTTTATTAG+AGG | - | chr2_1:16827303-16827322 | Msa0198230:CDS | 10.0% |
| !! | AAGAGTAAAAAATTAAAAAA+AGG | - | chr2_1:16829305-16829324 | Msa0198230:intron | 10.0% |
| !! | AGAGTAAAAAATTAAAAAAA+GGG | - | chr2_1:16829306-16829325 | Msa0198230:intron | 10.0% |
| !!! | AGTATTTTAATTTTGTTTTT+CGG | + | chr2_1:16830615-16830634 | None:intergenic | 10.0% |
| !!! | ATATATAACTATATTTTTCT+GGG | + | chr2_1:16831682-16831701 | None:intergenic | 10.0% |
| !!! | AATATATAACTATATTTTTC+TGG | + | chr2_1:16831683-16831702 | None:intergenic | 10.0% |
| !! | AGAAAAATATAGTTATATAT+TGG | - | chr2_1:16831682-16831701 | Msa0198230:intron | 10.0% |
| !! | CATAACAATAATATTCTATT+TGG | - | chr2_1:16827267-16827286 | Msa0198230:CDS | 15.0% |
| !! | ACAAATGATTATAATACAAA+CGG | + | chr2_1:16827902-16827921 | None:intergenic | 15.0% |
| !! | TAAAGATAAAAATAAGAATC+CGG | + | chr2_1:16830977-16830996 | None:intergenic | 15.0% |
| !!! | TTGTGTTTCAATTATTTTTT+TGG | - | chr2_1:16831215-16831234 | Msa0198230:CDS | 15.0% |
| !! | AAAATATAGTTATATATTGG+AGG | - | chr2_1:16831685-16831704 | Msa0198230:intron | 15.0% |
| !! | ATGTATACAAGTATATTATT+TGG | - | chr2_1:16832047-16832066 | Msa0198230:CDS | 15.0% |
| !! | TAAAAAGAATGTTTAAATGA+AGG | + | chr2_1:16832131-16832150 | None:intergenic | 15.0% |
| !! | TAAGTTTCATAAGATAATTG+AGG | - | chr2_1:16827524-16827543 | Msa0198230:intron | 20.0% |
| !! | AAATGATTATAATACAAACG+GGG | + | chr2_1:16827900-16827919 | None:intergenic | 20.0% |
| !! | CAAATGATTATAATACAAAC+GGG | + | chr2_1:16827901-16827920 | None:intergenic | 20.0% |
| !! | ATAATCAATCTAAGAAAACT+AGG | + | chr2_1:16828559-16828578 | None:intergenic | 20.0% |
| !!! | GTTTGTTATGATAGAAATTA+AGG | - | chr2_1:16828854-16828873 | Msa0198230:intron | 20.0% |
| !!! | TACTGAAAAGTAATTTGTTA+AGG | - | chr2_1:16828889-16828908 | Msa0198230:intron | 20.0% |
| !!! | ACTGAAAAGTAATTTGTTAA+GGG | - | chr2_1:16828890-16828909 | Msa0198230:intron | 20.0% |
| !! | TTAGGAAAATAATGATCTAA+TGG | - | chr2_1:16828956-16828975 | Msa0198230:intron | 20.0% |
| !! | ATCAATTAAAAGAGTAGAAA+TGG | - | chr2_1:16829011-16829030 | Msa0198230:intron | 20.0% |
| !! | TGAACATTTATAGTTTCATT+TGG | + | chr2_1:16829193-16829212 | None:intergenic | 20.0% |
| !! | AAGTAAAATTTCAACATCAT+AGG | + | chr2_1:16829253-16829272 | None:intergenic | 20.0% |
| !!! | AAATCATTCATTGATTACTT+TGG | - | chr2_1:16829514-16829533 | Msa0198230:intron | 20.0% |
| !!! | AAATGCTCTTCAATTTTTTA+TGG | + | chr2_1:16829796-16829815 | None:intergenic | 20.0% |
| !! | CAATGTATATTATACTAGTA+TGG | - | chr2_1:16829917-16829936 | Msa0198230:intron | 20.0% |
| !! | TATATTATACTAGTATGGAT+GGG | - | chr2_1:16829922-16829941 | Msa0198230:intron | 20.0% |
| !! | AATAAGAAAATAAGTTCTGT+TGG | - | chr2_1:16830079-16830098 | Msa0198230:intron | 20.0% |
| !! | TCAGAATTAGAACATTAATT+GGG | + | chr2_1:16830299-16830318 | None:intergenic | 20.0% |
| !! | CGACAATGTTTATTAATAAT+AGG | - | chr2_1:16830505-16830524 | Msa0198230:intron | 20.0% |
| !! | AAAAAATCCAAAAACTAAAC+TGG | + | chr2_1:16831166-16831185 | None:intergenic | 20.0% |
| !! | TAGTAAATGATAATCAAACT+GGG | - | chr2_1:16831359-16831378 | Msa0198230:CDS | 20.0% |
| !!! | AACTTTTTATATTGTTGTCA+AGG | - | chr2_1:16831466-16831485 | Msa0198230:CDS | 20.0% |
| !! | AATCAACTTAAAAAGTTTAC+CGG | + | chr2_1:16831552-16831571 | None:intergenic | 20.0% |
| !!! | ATTCAATTCTCTGAATTTTA+CGG | + | chr2_1:16831715-16831734 | None:intergenic | 20.0% |
| !!! | CTTTTAAATATGAATGAATG+TGG | - | chr2_1:16831796-16831815 | Msa0198230:CDS | 20.0% |
| ! | ATAAGATAATTGAGGAGTTT+GGG | - | chr2_1:16827532-16827551 | Msa0198230:intron | 25.0% |
| ! | AAGAAAAAAAAACCTCCTAA+GGG | + | chr2_1:16827856-16827875 | None:intergenic | 25.0% |
| ! | AAAGAAAAAAAAACCTCCTA+AGG | + | chr2_1:16827857-16827876 | None:intergenic | 25.0% |
| ! | TACAAAATGTTGTCAAATAG+TGG | - | chr2_1:16827992-16828011 | Msa0198230:intron | 25.0% |
| ! | CTTGTGTGTTAATGTTAATA+GGG | - | chr2_1:16828162-16828181 | Msa0198230:intron | 25.0% |
| ! | AGCGTTCATTACTATATTTA+AGG | - | chr2_1:16828804-16828823 | Msa0198230:intron | 25.0% |
| ! | ATTAAAAGAGTAGAAATGGA+TGG | - | chr2_1:16829015-16829034 | Msa0198230:intron | 25.0% |
| ! | TTAATTACTTAAACAACTCC+AGG | - | chr2_1:16829093-16829112 | Msa0198230:intron | 25.0% |
| !! | TTTTTACTCTTATACACGTA+TGG | + | chr2_1:16829296-16829315 | None:intergenic | 25.0% |
| ! | AAAGTTATAGTCAAACAGTA+AGG | - | chr2_1:16829592-16829611 | Msa0198230:intron | 25.0% |
| ! | GGCTCTATAGTATAATTTAT+TGG | + | chr2_1:16829823-16829842 | None:intergenic | 25.0% |
| ! | TTTATTTACTACTCCAGTTT+AGG | + | chr2_1:16829881-16829900 | None:intergenic | 25.0% |
| ! | GTATATTATACTAGTATGGA+TGG | - | chr2_1:16829921-16829940 | Msa0198230:intron | 25.0% |
| ! | ACCTACAATTACAAAAATAG+AGG | - | chr2_1:16829999-16830018 | Msa0198230:intron | 25.0% |
| ! | CCTACAATTACAAAAATAGA+GGG | - | chr2_1:16830000-16830019 | Msa0198230:intron | 25.0% |
| ! | CTACAATTACAAAAATAGAG+GGG | - | chr2_1:16830001-16830020 | Msa0198230:intron | 25.0% |
| !!! | GTTTATTTCTGAATCATTGT+AGG | + | chr2_1:16830244-16830263 | None:intergenic | 25.0% |
| ! | CAATGATTCAGAAATAAACT+TGG | - | chr2_1:16830245-16830264 | Msa0198230:intron | 25.0% |
| ! | GAAAAAAAGGGGATATTATT+AGG | + | chr2_1:16830273-16830292 | None:intergenic | 25.0% |
| ! | TTAATTGGGAAGGAAAAAAA+GGG | + | chr2_1:16830285-16830304 | None:intergenic | 25.0% |
| ! | ATTAATTGGGAAGGAAAAAA+AGG | + | chr2_1:16830286-16830305 | None:intergenic | 25.0% |
| ! | AATTAGAACATTAATTGGGA+AGG | + | chr2_1:16830295-16830314 | None:intergenic | 25.0% |
| ! | CTCAGAATTAGAACATTAAT+TGG | + | chr2_1:16830300-16830319 | None:intergenic | 25.0% |
| ! | GTTACTTAAACTATGTACTT+TGG | + | chr2_1:16830537-16830556 | None:intergenic | 25.0% |
| ! | ACATAAACATTGTCAGAAAA+GGG | + | chr2_1:16830692-16830711 | None:intergenic | 25.0% |
| ! | AACATAAACATTGTCAGAAA+AGG | + | chr2_1:16830693-16830712 | None:intergenic | 25.0% |
| ! | AGTTGTATTTGAACCAAATT+GGG | - | chr2_1:16831008-16831027 | Msa0198230:intron | 25.0% |
| ! | TTATTGTGTTTCAATGAACT+TGG | - | chr2_1:16831094-16831113 | Msa0198230:intron | 25.0% |
| ! | AATTGAAACACAAGATCAAT+GGG | + | chr2_1:16831208-16831227 | None:intergenic | 25.0% |
| ! | TAATTGAAACACAAGATCAA+TGG | + | chr2_1:16831209-16831228 | None:intergenic | 25.0% |
| ! | CAGTTTGATTATCATTTACT+AGG | + | chr2_1:16831360-16831379 | None:intergenic | 25.0% |
| ! | CTAGTAAATGATAATCAAAC+TGG | - | chr2_1:16831358-16831377 | Msa0198230:CDS | 25.0% |
| ! | ACAATGTTGTCACATAAATT+GGG | + | chr2_1:16831438-16831457 | None:intergenic | 25.0% |
| ! | TACAATGTTGTCACATAAAT+TGG | + | chr2_1:16831439-16831458 | None:intergenic | 25.0% |
| ! | TCAAAGTATAAAGAACATGT+GGG | - | chr2_1:16831581-16831600 | Msa0198230:CDS | 25.0% |
| ! | AATGTGGTTAATTGAAAGTA+GGG | - | chr2_1:16831812-16831831 | Msa0198230:CDS | 25.0% |
| !!! | AAAGTAGGGTTTTTAGTATT+GGG | - | chr2_1:16831826-16831845 | Msa0198230:CDS | 25.0% |
| !! | TTTTTGTAACGGGAAATTCA+AGG | + | chr2_1:16827063-16827082 | None:intergenic | 30.0% |
| ! | ATCGTCTTCGATTTTTGTAA+CGG | + | chr2_1:16827074-16827093 | None:intergenic | 30.0% |
| TTGAAGAGTTTGAGAAGTAA+AGG | + | chr2_1:16827100-16827119 | None:intergenic | 30.0% | |
| !! | TGAATAAGACAAAGCATTGA+AGG | + | chr2_1:16827180-16827199 | None:intergenic | 30.0% |
| CATAAGATAATTGAGGAGTT+TGG | - | chr2_1:16827531-16827550 | Msa0198230:intron | 30.0% | |
| TATCTCAAAACAATAGCGTT+TGG | + | chr2_1:16827957-16827976 | None:intergenic | 30.0% | |
| TCAAATAGTGGTTGTTATAG+TGG | - | chr2_1:16828004-16828023 | Msa0198230:intron | 30.0% | |
| GCTTGTGTGTTAATGTTAAT+AGG | - | chr2_1:16828161-16828180 | Msa0198230:intron | 30.0% | |
| ! | ACAGGTATATTACTAGTTTG+AGG | + | chr2_1:16828767-16828786 | None:intergenic | 30.0% |
| AAATATAGTAATGAACGCTG+CGG | + | chr2_1:16828803-16828822 | None:intergenic | 30.0% | |
| ! | TATATTTAAGGTCAACGTTG+TGG | - | chr2_1:16828816-16828835 | Msa0198230:intron | 30.0% |
| ACGATTCTATGTTCTTAGTT+AGG | + | chr2_1:16828924-16828943 | None:intergenic | 30.0% | |
| TGATATATTATGCAGTATCC+TGG | + | chr2_1:16829114-16829133 | None:intergenic | 30.0% | |
| AACATCATAGGATTTGAATG+AGG | + | chr2_1:16829241-16829260 | None:intergenic | 30.0% | |
| ! | GATTACTTTGGTAATCTTTC+AGG | - | chr2_1:16829526-16829545 | Msa0198230:intron | 30.0% |
| CAATTAATTTACTCACACGA+TGG | + | chr2_1:16829629-16829648 | None:intergenic | 30.0% | |
| ! | GCATTCATATTAAGCTTTGA+TGG | + | chr2_1:16829772-16829791 | None:intergenic | 30.0% |
| TATACTATAGAGCCACAAAT+TGG | - | chr2_1:16829829-16829848 | Msa0198230:intron | 30.0% | |
| ! | AGCTGAATTTTACCAATTTG+TGG | + | chr2_1:16829844-16829863 | None:intergenic | 30.0% |
| TGGGTAGAAAATTATATTCC+AGG | - | chr2_1:16829941-16829960 | Msa0198230:intron | 30.0% | |
| !!! | CCCTCTATTTTTGTAATTGT+AGG | + | chr2_1:16830003-16830022 | None:intergenic | 30.0% |
| AATTACAAAAATAGAGGGGA+GGG | - | chr2_1:16830005-16830024 | Msa0198230:intron | 30.0% | |
| ! | TTATCATGTCTCCATTTTGA+TGG | + | chr2_1:16830109-16830128 | None:intergenic | 30.0% |
| ! | GTGCTATTGCTTCATTTAAT+TGG | + | chr2_1:16830201-16830220 | None:intergenic | 30.0% |
| TAATTGGGAAGGAAAAAAAG+GGG | + | chr2_1:16830284-16830303 | None:intergenic | 30.0% | |
| CATTCTAAGCTAAGATATCA+TGG | + | chr2_1:16830340-16830359 | None:intergenic | 30.0% | |
| TGATATCTTAGCTTAGAATG+TGG | - | chr2_1:16830340-16830359 | Msa0198230:intron | 30.0% | |
| TATTAATAAACATTGTCGCG+TGG | + | chr2_1:16830503-16830522 | None:intergenic | 30.0% | |
| TTAAACTATGTACTTTGGAC+TGG | + | chr2_1:16830532-16830551 | None:intergenic | 30.0% | |
| GTTTATGTTACACTCTTTGT+TGG | - | chr2_1:16830704-16830723 | Msa0198230:CDS | 30.0% | |
| !! | TTGTTGATTTATTCACTAGC+TGG | - | chr2_1:16830801-16830820 | Msa0198230:intron | 30.0% |
| CATGATAAAGAAAGAAACAC+AGG | - | chr2_1:16830837-16830856 | Msa0198230:intron | 30.0% | |
| CAGTTGTATTTGAACCAAAT+TGG | - | chr2_1:16831007-16831026 | Msa0198230:intron | 30.0% | |
| GTTGTATTTGAACCAAATTG+GGG | - | chr2_1:16831009-16831028 | Msa0198230:intron | 30.0% | |
| AATATGCATTCCACATTGAT+TGG | - | chr2_1:16831129-16831148 | Msa0198230:intron | 30.0% | |
| AAGCTTGCAATAAAAAGGAA+TGG | + | chr2_1:16831330-16831349 | None:intergenic | 30.0% | |
| ! | TTCCTTTTTATTGCAAGCTT+TGG | - | chr2_1:16831330-16831349 | Msa0198230:CDS | 30.0% |
| ! | ATTGGGAAAGATTTAAAACG+AGG | + | chr2_1:16831421-16831440 | None:intergenic | 30.0% |
| CTCAAAGTATAAAGAACATG+TGG | - | chr2_1:16831580-16831599 | Msa0198230:CDS | 30.0% | |
| GAATGTGGTTAATTGAAAGT+AGG | - | chr2_1:16831811-16831830 | Msa0198230:CDS | 30.0% | |
| !!! | GAAAGTAGGGTTTTTAGTAT+TGG | - | chr2_1:16831825-16831844 | Msa0198230:CDS | 30.0% |
| ATGAATACACGAGCAAAATA+TGG | + | chr2_1:16831908-16831927 | None:intergenic | 30.0% | |
| GCATCTTTACATCAAATTGA+TGG | + | chr2_1:16831937-16831956 | None:intergenic | 30.0% | |
| TCTTTGTAAAGGTCGAATGA+GGG | + | chr2_1:16826905-16826924 | None:intergenic | 35.0% | |
| GAGAAGATTTGAAAGAGATG+TGG | + | chr2_1:16826988-16827007 | None:intergenic | 35.0% | |
| ! | TCGTCTTCGATTTTTGTAAC+GGG | + | chr2_1:16827073-16827092 | None:intergenic | 35.0% |
| ! | CAATGCTTTGTCTTATTCAC+TGG | - | chr2_1:16827181-16827200 | Msa0198230:three_prime_UTR | 35.0% |
| AAATTGCTGCTATAGTCTAG+CGG | - | chr2_1:16827923-16827942 | Msa0198230:intron | 35.0% | |
| ! | TTGCTGATAGCGTAAAATAG+AGG | + | chr2_1:16828066-16828085 | None:intergenic | 35.0% |
| GTTTCATTTCATGTGCTTCT+AGG | - | chr2_1:16828204-16828223 | Msa0198230:intron | 35.0% | |
| TGATGACATCAAGAGAAGTT+CGG | - | chr2_1:16828340-16828359 | Msa0198230:intron | 35.0% | |
| GGATAGAGATTGATTATGTG+TGG | - | chr2_1:16828611-16828630 | Msa0198230:intron | 35.0% | |
| GGGTAATGTTGTTGAATTGA+TGG | - | chr2_1:16828693-16828712 | Msa0198230:intron | 35.0% | |
| AGTCAAACATAAATGAGACC+AGG | + | chr2_1:16828744-16828763 | None:intergenic | 35.0% | |
| AATCGTACTCACTCAACATT+AGG | - | chr2_1:16828938-16828957 | Msa0198230:intron | 35.0% | |
| GAAACACTTACATTGAAGCA+AGG | + | chr2_1:16829061-16829080 | None:intergenic | 35.0% | |
| ATTTGGAAGCAGTATTGTAG+AGG | + | chr2_1:16829176-16829195 | None:intergenic | 35.0% | |
| ATAGGATTTGAATGAGGAAG+GGG | + | chr2_1:16829235-16829254 | None:intergenic | 35.0% | |
| CATAGGATTTGAATGAGGAA+GGG | + | chr2_1:16829236-16829255 | None:intergenic | 35.0% | |
| TCATAGGATTTGAATGAGGA+AGG | + | chr2_1:16829237-16829256 | None:intergenic | 35.0% | |
| ! | AAGGGACAACTATGATTTGT+CGG | - | chr2_1:16829324-16829343 | Msa0198230:intron | 35.0% |
| ATAGCATACACCTTCTACAT+AGG | - | chr2_1:16829461-16829480 | Msa0198230:intron | 35.0% | |
| TAGCATACACCTTCTACATA+GGG | - | chr2_1:16829462-16829481 | Msa0198230:intron | 35.0% | |
| ! | TTATTTCTCCCCTATGTAGA+AGG | + | chr2_1:16829474-16829493 | None:intergenic | 35.0% |
| ! | ATTTTATTCCTGTGCAGGTA+TGG | + | chr2_1:16829498-16829517 | None:intergenic | 35.0% |
| ! | GAATGATTTTATTCCTGTGC+AGG | + | chr2_1:16829503-16829522 | None:intergenic | 35.0% |
| TAGTCAAACAGTAAGGATTG+TGG | - | chr2_1:16829599-16829618 | Msa0198230:intron | 35.0% | |
| GTGCAAAATAGAGCGTATAT+AGG | + | chr2_1:16829727-16829746 | None:intergenic | 35.0% | |
| ! | TAAGCTTTGATGGACAATGT+CGG | + | chr2_1:16829762-16829781 | None:intergenic | 35.0% |
| ATGTAAAACCCTACCTAAAC+TGG | - | chr2_1:16829865-16829884 | Msa0198230:intron | 35.0% | |
| TTACTACTCCAGTTTAGGTA+GGG | + | chr2_1:16829876-16829895 | None:intergenic | 35.0% | |
| TTTACTACTCCAGTTTAGGT+AGG | + | chr2_1:16829877-16829896 | None:intergenic | 35.0% | |
| ACAATGATATGTGCTTGGAA+TGG | + | chr2_1:16829969-16829988 | None:intergenic | 35.0% | |
| GTTCTACAATGATATGTGCT+TGG | + | chr2_1:16829974-16829993 | None:intergenic | 35.0% | |
| CAATTACAAAAATAGAGGGG+AGG | - | chr2_1:16830004-16830023 | Msa0198230:intron | 35.0% | |
| ATTACAAAAATAGAGGGGAG+GGG | - | chr2_1:16830006-16830025 | Msa0198230:intron | 35.0% | |
| CATGATAAAGCTTCTACTTG+TGG | - | chr2_1:16830121-16830140 | Msa0198230:intron | 35.0% | |
| ! | TTCTCTGCAATTTGTTTAGG+TGG | + | chr2_1:16830172-16830191 | None:intergenic | 35.0% |
| ! | GTCTTCTCTGCAATTTGTTT+AGG | + | chr2_1:16830175-16830194 | None:intergenic | 35.0% |
| GCTAAGATATCATGGAAAGA+AGG | + | chr2_1:16830332-16830351 | None:intergenic | 35.0% | |
| GGGTAATGTTGTTGAATTGA+TGG | - | chr2_1:16828693-16828712 | Msa0198230:intron | 35.0% | |
| ACTCTTTGTTGGAGTTAGAA+GGG | - | chr2_1:16830715-16830734 | Msa0198230:CDS | 35.0% | |
| GTCAAACAACAGTCTTTACA+AGG | + | chr2_1:16830764-16830783 | None:intergenic | 35.0% | |
| !! | GAGGTTCTAAAGGTAAAATC+CGG | - | chr2_1:16830955-16830974 | Msa0198230:intron | 35.0% |
| TTTGAACCAAATTGGGGAAA+AGG | - | chr2_1:16831015-16831034 | Msa0198230:intron | 35.0% | |
| TTGTGTTTCAATGAACTTGG+AGG | - | chr2_1:16831097-16831116 | Msa0198230:intron | 35.0% | |
| TGTGTTTCAATGAACTTGGA+GGG | - | chr2_1:16831098-16831117 | Msa0198230:intron | 35.0% | |
| AAACTAAACTGGCACGAAAT+TGG | + | chr2_1:16831155-16831174 | None:intergenic | 35.0% | |
| !!! | TTTCGTGCCAGTTTAGTTTT+TGG | - | chr2_1:16831156-16831175 | Msa0198230:CDS | 35.0% |
| TACGAAAAACATGCTAGATG+TGG | + | chr2_1:16831296-16831315 | None:intergenic | 35.0% | |
| AGCCAAAGCTTGCAATAAAA+AGG | + | chr2_1:16831335-16831354 | None:intergenic | 35.0% | |
| GAAGAAATTCAAATGCATGC+CGG | - | chr2_1:16831530-16831549 | Msa0198230:CDS | 35.0% | |
| AACGTTTCAGAGATTAGAAG+CGG | - | chr2_1:16831608-16831627 | Msa0198230:CDS | 35.0% | |
| TACGTGCATCATTAGATTGA+AGG | - | chr2_1:16831986-16832005 | Msa0198230:CDS | 35.0% | |
| ! | TCATTAGATTGAAGGCACAA+TGG | - | chr2_1:16831994-16832013 | Msa0198230:CDS | 35.0% |
| CTTTGTAAAGGTCGAATGAG+GGG | + | chr2_1:16826904-16826923 | None:intergenic | 40.0% | |
| GTCTTTGTAAAGGTCGAATG+AGG | + | chr2_1:16826906-16826925 | None:intergenic | 40.0% | |
| GATAGGAACGGTCTTTGTAA+AGG | + | chr2_1:16826916-16826935 | None:intergenic | 40.0% | |
| ! | TTGCGGATTGTTGATAGGAA+CGG | + | chr2_1:16826928-16826947 | None:intergenic | 40.0% |
| AGAGATGTGGAAATTGTGAG+AGG | + | chr2_1:16826975-16826994 | None:intergenic | 40.0% | |
| ! | GGTTTCGTGGATTTGTTTAG+CGG | + | chr2_1:16827020-16827039 | None:intergenic | 40.0% |
| TGAGGAAAATTAGGGTTTCG+TGG | + | chr2_1:16827033-16827052 | None:intergenic | 40.0% | |
| ! | GAGTTCGGTGAGGAAAATTA+GGG | + | chr2_1:16827041-16827060 | None:intergenic | 40.0% |
| AACGGGAAATTCAAGGAGTT+CGG | + | chr2_1:16827056-16827075 | None:intergenic | 40.0% | |
| ! | TTTTATTAGAGGCGATGACG+AGG | - | chr2_1:16827314-16827333 | Msa0198230:CDS | 40.0% |
| TGACGAGGCTATTCTTGATA+TGG | - | chr2_1:16827329-16827348 | Msa0198230:CDS | 40.0% | |
| TGAGCAAACTGTTGTTGAGT+TGG | - | chr2_1:16827416-16827435 | Msa0198230:CDS | 40.0% | |
| TCAAGCTCATCCTTCTTAGA+CGG | + | chr2_1:16827471-16827490 | None:intergenic | 40.0% | |
| GATGAGCTTGAGAAAGAGAA+GGG | - | chr2_1:16827480-16827499 | Msa0198230:CDS | 40.0% | |
| TAATTGAGGAGTTTGGGTCA+AGG | - | chr2_1:16827538-16827557 | Msa0198230:intron | 40.0% | |
| ! | AGTTGCAGACTTTTAATGCG+AGG | - | chr2_1:16827670-16827689 | Msa0198230:intron | 40.0% |
| ! | GTTGCAGACTTTTAATGCGA+GGG | - | chr2_1:16827671-16827690 | Msa0198230:intron | 40.0% |
| GCATAAGATCAAAGACTTGG+AGG | - | chr2_1:16827806-16827825 | Msa0198230:intron | 40.0% | |
| !!! | TGCTATAGTCTAGCGGATTT+TGG | - | chr2_1:16827930-16827949 | Msa0198230:intron | 40.0% |
| ! | TGTGCTTCTAGGTTGAAGAT+TGG | - | chr2_1:16828215-16828234 | Msa0198230:intron | 40.0% |
| TCAGTATGTGTTGAATCCCA+AGG | - | chr2_1:16828247-16828266 | Msa0198230:intron | 40.0% | |
| CAGTATGTGTTGAATCCCAA+GGG | - | chr2_1:16828248-16828267 | Msa0198230:intron | 40.0% | |
| TCAAAACCCATGATTTCAGC+AGG | + | chr2_1:16828281-16828300 | None:intergenic | 40.0% | |
| TCTCTTGATGTCATCAGCAT+AGG | + | chr2_1:16828336-16828355 | None:intergenic | 40.0% | |
| !! | TTCGGCGAACTTTTTCTGAA+GGG | + | chr2_1:16828390-16828409 | None:intergenic | 40.0% |
| !! | TTTCGGCGAACTTTTTCTGA+AGG | + | chr2_1:16828391-16828410 | None:intergenic | 40.0% |
| TGTGCTTGTGCTTTACATGA+AGG | - | chr2_1:16828525-16828544 | Msa0198230:intron | 40.0% | |
| TCTATCCAAACTCACTCTCT+CGG | + | chr2_1:16828598-16828617 | None:intergenic | 40.0% | |
| TTGATTATGTGTGGACAGTG+TGG | - | chr2_1:16828620-16828639 | Msa0198230:intron | 40.0% | |
| TTCCACATTCTAATTCCTGC+AGG | + | chr2_1:16828663-16828682 | None:intergenic | 40.0% | |
| CAGGTACAAGTTAGAAACAC+AGG | + | chr2_1:16828725-16828744 | None:intergenic | 40.0% | |
| ! | CTGTGTTTCTAACTTGTACC+TGG | - | chr2_1:16828723-16828742 | Msa0198230:intron | 40.0% |
| AATATACCTGTGCATCCGTA+TGG | - | chr2_1:16828776-16828795 | Msa0198230:intron | 40.0% | |
| ATATACCTGTGCATCCGTAT+GGG | - | chr2_1:16828777-16828796 | Msa0198230:intron | 40.0% | |
| ! | AGGGACAACTATGATTTGTC+GGG | - | chr2_1:16829325-16829344 | Msa0198230:intron | 40.0% |
| AGCATACACCTTCTACATAG+GGG | - | chr2_1:16829463-16829482 | Msa0198230:intron | 40.0% | |
| GAAATAAACCATACCTGCAC+AGG | - | chr2_1:16829487-16829506 | Msa0198230:intron | 40.0% | |
| CTGACATCACTTCCTGAAAT+AGG | - | chr2_1:16829692-16829711 | Msa0198230:intron | 40.0% | |
| ACAATGTCGGGCTTCTTATT+TGG | + | chr2_1:16829749-16829768 | None:intergenic | 40.0% | |
| ! | AAGCTTTGATGGACAATGTC+GGG | + | chr2_1:16829761-16829780 | None:intergenic | 40.0% |
| CTGTTGGTACACCATCAAAA+TGG | - | chr2_1:16830095-16830114 | Msa0198230:intron | 40.0% | |
| GTGCAACAAGTAAGAAACAC+AGG | + | chr2_1:16830407-16830426 | None:intergenic | 40.0% | |
| TTGTCAGAAAAGGGAAGAGT+GGG | + | chr2_1:16830683-16830702 | None:intergenic | 40.0% | |
| ATTGTCAGAAAAGGGAAGAG+TGG | + | chr2_1:16830684-16830703 | None:intergenic | 40.0% | |
| CACTCTTTGTTGGAGTTAGA+AGG | - | chr2_1:16830714-16830733 | Msa0198230:CDS | 40.0% | |
| TCACTAGCTGGAAACTCAAA+TGG | - | chr2_1:16830813-16830832 | Msa0198230:intron | 40.0% | |
| TGATCATGATGTGGGCATTA+TGG | - | chr2_1:16830918-16830937 | Msa0198230:intron | 40.0% | |
| ACGAAATTGGCCAATCAATG+TGG | + | chr2_1:16831142-16831161 | None:intergenic | 40.0% | |
| ACGTTTCAGAGATTAGAAGC+GGG | - | chr2_1:16831609-16831628 | Msa0198230:CDS | 40.0% | |
| GAGCAAAATATGGAGCTGAA+TGG | + | chr2_1:16831898-16831917 | None:intergenic | 40.0% | |
| !! | GGAAGGTAGGAAGTGTCTTT+GGG | + | chr2_1:16826809-16826828 | None:intergenic | 45.0% |
| !! | TGGAAGGTAGGAAGTGTCTT+TGG | + | chr2_1:16826810-16826829 | None:intergenic | 45.0% |
| ! | TGCGATTGCGGATTGTTGAT+AGG | + | chr2_1:16826933-16826952 | None:intergenic | 45.0% |
| ATTTGTTTAGCGGAAGGGGA+AGG | + | chr2_1:16827010-16827029 | None:intergenic | 45.0% | |
| ! | GTGGATTTGTTTAGCGGAAG+GGG | + | chr2_1:16827014-16827033 | None:intergenic | 45.0% |
| ! | CGTGGATTTGTTTAGCGGAA+GGG | + | chr2_1:16827015-16827034 | None:intergenic | 45.0% |
| ! | TCGTGGATTTGTTTAGCGGA+AGG | + | chr2_1:16827016-16827035 | None:intergenic | 45.0% |
| ! | GGAGTTCGGTGAGGAAAATT+AGG | + | chr2_1:16827042-16827061 | None:intergenic | 45.0% |
| ! | GAAATTCAAGGAGTTCGGTG+AGG | + | chr2_1:16827051-16827070 | None:intergenic | 45.0% |
| ! | AGCATTGAAGGCCATTGATG+CGG | + | chr2_1:16827168-16827187 | None:intergenic | 45.0% |
| TCGACGAATTCGAGAGAGAT+AGG | + | chr2_1:16827230-16827249 | None:intergenic | 45.0% | |
| CGAGGCTATTCTTGATATGG+AGG | - | chr2_1:16827332-16827351 | Msa0198230:CDS | 45.0% | |
| TCATGAGAAGTCTGTTGCTG+AGG | - | chr2_1:16827377-16827396 | Msa0198230:CDS | 45.0% | |
| !! | GCAAACTGTTGTTGAGTTGG+AGG | - | chr2_1:16827419-16827438 | Msa0198230:CDS | 45.0% |
| GGATGAGCTTGAGAAAGAGA+AGG | - | chr2_1:16827479-16827498 | Msa0198230:CDS | 45.0% | |
| ! | TGAGAAAGAGAAGGGTGTGT+TGG | - | chr2_1:16827488-16827507 | Msa0198230:CDS | 45.0% |
| ! | AAAGAGAAGGGTGTGTTGGA+AGG | - | chr2_1:16827492-16827511 | Msa0198230:intron | 45.0% |
| GGAGAATGAGAGGATTGTTG+AGG | - | chr2_1:16827620-16827639 | Msa0198230:intron | 45.0% | |
| GAGGATTGTTGAGGAGAATG+AGG | - | chr2_1:16827629-16827648 | Msa0198230:intron | 45.0% | |
| TGAGGAGCTTAAGACGAAAG+TGG | - | chr2_1:16827647-16827666 | Msa0198230:intron | 45.0% | |
| ! | GACTTTTAATGCGAGGGATG+TGG | - | chr2_1:16827677-16827696 | Msa0198230:intron | 45.0% |
| !! | GGAACTTGCTAGGAATGCTT+GGG | - | chr2_1:16827749-16827768 | Msa0198230:intron | 45.0% |
| ! | ATGCTTGGGAGGAAAAGTGT+TGG | - | chr2_1:16827763-16827782 | Msa0198230:intron | 45.0% |
| !! | TGCTTGGGAGGAAAAGTGTT+GGG | - | chr2_1:16827764-16827783 | Msa0198230:intron | 45.0% |
| CGCGCATAAGATCAAAGACT+TGG | - | chr2_1:16827803-16827822 | Msa0198230:intron | 45.0% | |
| TCTCTCCATAGATTGCAACC+AGG | - | chr2_1:16827830-16827849 | Msa0198230:intron | 45.0% | |
| AAAAAAACCTCCTAAGGGCC+TGG | + | chr2_1:16827851-16827870 | None:intergenic | 45.0% | |
| CTAGTCAAGTGTGCACTGTT+TGG | - | chr2_1:16828108-16828127 | Msa0198230:CDS | 45.0% | |
| TCAGCATAGGATTCAAGCAC+AGG | + | chr2_1:16828323-16828342 | None:intergenic | 45.0% | |
| TGACATCAAGAGAAGTTCGG+TGG | - | chr2_1:16828343-16828362 | Msa0198230:intron | 45.0% | |
| ! | GAGAAGTTCGGTGGTGAAAT+TGG | - | chr2_1:16828352-16828371 | Msa0198230:intron | 45.0% |
| GGTGGTGAAATTGGAAGAGT+TGG | - | chr2_1:16828361-16828380 | Msa0198230:intron | 45.0% | |
| ATGTACCGAGAGAGTGAGTT+TGG | - | chr2_1:16828590-16828609 | Msa0198230:intron | 45.0% | |
| TAGAATGTGGAAGCTGATGC+AGG | - | chr2_1:16828671-16828690 | Msa0198230:intron | 45.0% | |
| AGAATGTGGAAGCTGATGCA+GGG | - | chr2_1:16828672-16828691 | Msa0198230:intron | 45.0% | |
| ! | GGGACAACTATGATTTGTCG+GGG | - | chr2_1:16829326-16829345 | Msa0198230:intron | 45.0% |
| ! | GGACAACTATGATTTGTCGG+GGG | - | chr2_1:16829327-16829346 | Msa0198230:intron | 45.0% |
| ! | AACTATGATTTGTCGGGGGT+AGG | - | chr2_1:16829331-16829350 | Msa0198230:intron | 45.0% |
| ! | ACTATGATTTGTCGGGGGTA+GGG | - | chr2_1:16829332-16829351 | Msa0198230:intron | 45.0% |
| CACTTCCTGAAATAGGCTTC+TGG | - | chr2_1:16829699-16829718 | Msa0198230:intron | 45.0% | |
| AGGATCCAGAAGCCTATTTC+AGG | + | chr2_1:16829707-16829726 | None:intergenic | 45.0% | |
| TATGTGCTTGGAATGGTTCC+TGG | + | chr2_1:16829962-16829981 | None:intergenic | 45.0% | |
| TGGTTAGAACAGTTCACTGC+TGG | - | chr2_1:16830141-16830160 | Msa0198230:intron | 45.0% | |
| CTGAATCATTGTAGGTGTGC+TGG | + | chr2_1:16830236-16830255 | None:intergenic | 45.0% | |
| TAGAATGTGGAAGCTGATGC+AGG | - | chr2_1:16828671-16828690 | Msa0198230:intron | 45.0% | |
| AGAATGTGGAAGCTGATGCA+GGG | - | chr2_1:16828672-16828691 | Msa0198230:intron | 45.0% | |
| TGCCGAAGCTAAGAAGATGT+CGG | - | chr2_1:16830879-16830898 | Msa0198230:intron | 45.0% | |
| GTCCGACATCTTCTTAGCTT+CGG | + | chr2_1:16830884-16830903 | None:intergenic | 45.0% | |
| CAGCTAGCTGATCATGATGT+GGG | - | chr2_1:16830910-16830929 | Msa0198230:intron | 45.0% | |
| TGTGGGCATTATGGAAAGAG+AGG | - | chr2_1:16830927-16830946 | Msa0198230:intron | 45.0% | |
| TGGGTAGCAACTAGCATCTT+AGG | + | chr2_1:16831189-16831208 | None:intergenic | 45.0% | |
| GGCATCTGAATTGAAGTTGC+AGG | - | chr2_1:16831487-16831506 | Msa0198230:CDS | 45.0% | |
| !! | TAAATAAAATGATATTAAAA+TGG | - | chr2_1:16829893-16829912 | Msa0198230:intron | 5.0% |
| !! | AAATAAAATGATATTAAAAT+GGG | - | chr2_1:16829894-16829913 | Msa0198230:intron | 5.0% |
| !! | AAAATTAAAATACTATTAAA+AGG | - | chr2_1:16830621-16830640 | Msa0198230:CDS | 5.0% |
| !! | AAGTGTCTTTGGGTTGGCGA+CGG | + | chr2_1:16826799-16826818 | None:intergenic | 50.0% |
| !! | GGTAGGAAGTGTCTTTGGGT+TGG | + | chr2_1:16826805-16826824 | None:intergenic | 50.0% |
| !! | GGAGTTGATGGTTGCGATTG+CGG | + | chr2_1:16826945-16826964 | None:intergenic | 50.0% |
| GAAATTGTGAGAGGCGAGGA+AGG | + | chr2_1:16826966-16826985 | None:intergenic | 50.0% | |
| TGTGGAAATTGTGAGAGGCG+AGG | + | chr2_1:16826970-16826989 | None:intergenic | 50.0% | |
| CATTGAAGGCCATTGATGCG+GGG | + | chr2_1:16827166-16827185 | None:intergenic | 50.0% | |
| GCATTGAAGGCCATTGATGC+GGG | + | chr2_1:16827167-16827186 | None:intergenic | 50.0% | |
| GTCTGTTGCTGAGGAGAAAC+TGG | - | chr2_1:16827386-16827405 | Msa0198230:CDS | 50.0% | |
| !! | TGTTGAGTTGGAGGCGCAAT+TGG | - | chr2_1:16827428-16827447 | Msa0198230:CDS | 50.0% |
| AAGGATTGAGCCGTTGGAGA+GGG | - | chr2_1:16827557-16827576 | Msa0198230:intron | 50.0% | |
| GGAGAAGGAGAAGCAATTGG+AGG | - | chr2_1:16827587-16827606 | Msa0198230:intron | 50.0% | |
| TTAATGCGAGGGATGTGGAG+AGG | - | chr2_1:16827682-16827701 | Msa0198230:intron | 50.0% | |
| GGATGTGGAGAGGATGAAGA+AGG | - | chr2_1:16827692-16827711 | Msa0198230:intron | 50.0% | |
| !! | CGGAACTTGCTAGGAATGCT+TGG | - | chr2_1:16827748-16827767 | Msa0198230:intron | 50.0% |
| ! | ACTTGCTAGGAATGCTTGGG+AGG | - | chr2_1:16827752-16827771 | Msa0198230:intron | 50.0% |
| AAGGGCCTGGTTGCAATCTA+TGG | + | chr2_1:16827838-16827857 | None:intergenic | 50.0% | |
| TAGATTGCAACCAGGCCCTT+AGG | - | chr2_1:16827838-16827857 | Msa0198230:intron | 50.0% | |
| AACCACGCCTGCTGAAATCA+TGG | - | chr2_1:16828271-16828290 | Msa0198230:intron | 50.0% | |
| ACCACGCCTGCTGAAATCAT+GGG | - | chr2_1:16828272-16828291 | Msa0198230:intron | 50.0% | |
| AGTTCGCCGAAAATGCTGCT+AGG | - | chr2_1:16828399-16828418 | Msa0198230:intron | 50.0% | |
| ! | CTCGAGCCTAGCAGCATTTT+CGG | + | chr2_1:16828408-16828427 | None:intergenic | 50.0% |
| GAAAATGCTGCTAGGCTCGA+GGG | - | chr2_1:16828407-16828426 | Msa0198230:intron | 50.0% | |
| AAAATGCTGCTAGGCTCGAG+GGG | - | chr2_1:16828408-16828427 | Msa0198230:intron | 50.0% | |
| TGGACAGTGTGGTATCAGAG+TGG | - | chr2_1:16828631-16828650 | Msa0198230:intron | 50.0% | |
| GGCCTGCAGGAATTAGAATG+TGG | - | chr2_1:16828658-16828677 | Msa0198230:intron | 50.0% | |
| GAATGTGGAAGCTGATGCAG+GGG | - | chr2_1:16828673-16828692 | Msa0198230:intron | 50.0% | |
| ! | CTATGATTTGTCGGGGGTAG+GGG | - | chr2_1:16829333-16829352 | Msa0198230:intron | 50.0% |
| ! | TATGATTTGTCGGGGGTAGG+GGG | - | chr2_1:16829334-16829353 | Msa0198230:intron | 50.0% |
| GAATGTGGAAGCTGATGCAG+GGG | - | chr2_1:16828673-16828692 | Msa0198230:intron | 50.0% | |
| CCACATCATGATCAGCTAGC+TGG | + | chr2_1:16830912-16830931 | None:intergenic | 50.0% | |
| CCAGCTAGCTGATCATGATG+TGG | - | chr2_1:16830909-16830928 | Msa0198230:intron | 50.0% | |
| TATGGAAAGAGAGGCAGCTG+AGG | - | chr2_1:16830936-16830955 | Msa0198230:intron | 50.0% | |
| ! | AGAGGCAGCTGAGGTTCTAA+AGG | - | chr2_1:16830945-16830964 | Msa0198230:intron | 50.0% |
| ! | CCAACGCCTTTTCCCCAATT+TGG | + | chr2_1:16831024-16831043 | None:intergenic | 50.0% |
| ! | CCAAATTGGGGAAAAGGCGT+TGG | - | chr2_1:16831021-16831040 | Msa0198230:intron | 50.0% |
| ! | GAAGGCACAATGGCACAATG+AGG | - | chr2_1:16832004-16832023 | Msa0198230:CDS | 50.0% |
| CGAGACTGATGTCGGAATCG+CGG | + | chr2_1:16826853-16826872 | None:intergenic | 55.0% | |
| GCTGCTGACGAGACTGATGT+CGG | + | chr2_1:16826861-16826880 | None:intergenic | 55.0% | |
| GTCGAATGAGGGGATTCCGA+CGG | + | chr2_1:16826894-16826913 | None:intergenic | 55.0% | |
| AGAGGCGAGGAAGGAGTTGA+TGG | + | chr2_1:16826957-16826976 | None:intergenic | 55.0% | |
| ! | TGAGTTGGAGGCGCAATTGG+AGG | - | chr2_1:16827431-16827450 | Msa0198230:CDS | 55.0% |
| CTCATCCTTCTTAGACGGCG+CGG | + | chr2_1:16827466-16827485 | None:intergenic | 55.0% | |
| TGGGTCAAGGATTGAGCCGT+TGG | - | chr2_1:16827551-16827570 | Msa0198230:intron | 55.0% | |
| CAAGGATTGAGCCGTTGGAG+AGG | - | chr2_1:16827556-16827575 | Msa0198230:intron | 55.0% | |
| ! | TGAGCCGTTGGAGAGGGTTT+TGG | - | chr2_1:16827563-16827582 | Msa0198230:intron | 55.0% |
| TCCGCCAAAACCCTCTCCAA+CGG | + | chr2_1:16827570-16827589 | None:intergenic | 55.0% | |
| GGCGGAGAAGGAGAAGCAAT+TGG | - | chr2_1:16827584-16827603 | Msa0198230:intron | 55.0% | |
| GGAGAAGCAATTGGAGGCGA+AGG | - | chr2_1:16827593-16827612 | Msa0198230:intron | 55.0% | |
| GAAGCAATTGGAGGCGAAGG+TGG | - | chr2_1:16827596-16827615 | Msa0198230:intron | 55.0% | |
| !! | CGAAGGTGGTGGAGAATGAG+AGG | - | chr2_1:16827610-16827629 | Msa0198230:intron | 55.0% |
| AGGAGTTGCACGCTGTTGAG+AGG | - | chr2_1:16827712-16827731 | Msa0198230:intron | 55.0% | |
| GGAGTTGCACGCTGTTGAGA+GGG | - | chr2_1:16827713-16827732 | Msa0198230:intron | 55.0% | |
| TGTTGAGAGGGATGCTGGTG+AGG | - | chr2_1:16827725-16827744 | Msa0198230:intron | 55.0% | |
| ATTGCAACCAGGCCCTTAGG+AGG | - | chr2_1:16827841-16827860 | Msa0198230:intron | 55.0% | |
| ACCCATGATTTCAGCAGGCG+TGG | + | chr2_1:16828276-16828295 | None:intergenic | 55.0% | |
| CGAAAATGCTGCTAGGCTCG+AGG | - | chr2_1:16828406-16828425 | Msa0198230:intron | 55.0% | |
| GTGTGGTATCAGAGTGGTGC+TGG | - | chr2_1:16828637-16828656 | Msa0198230:intron | 55.0% | |
| AATGAACGCTGCGGCCCATA+CGG | + | chr2_1:16828794-16828813 | None:intergenic | 55.0% | |
| ! | ATGATTTGTCGGGGGTAGGG+GGG | - | chr2_1:16829335-16829354 | Msa0198230:intron | 55.0% |
| GGAGTCAGAGGACAAGCACA+AGG | + | chr2_1:16830482-16830501 | None:intergenic | 55.0% | |
| ACATTGTCGCGTGGAGTCAG+AGG | + | chr2_1:16830494-16830513 | None:intergenic | 55.0% | |
| !! | GTCTTTGGGTTGGCGACGGT+GGG | + | chr2_1:16826795-16826814 | None:intergenic | 60.0% |
| !! | TGTCTTTGGGTTGGCGACGG+TGG | + | chr2_1:16826796-16826815 | None:intergenic | 60.0% |
| !! | AGGGGTTGGTGGTGGAAGGT+AGG | + | chr2_1:16826822-16826841 | None:intergenic | 60.0% |
| !! | TGAGAGGGGTTGGTGGTGGA+AGG | + | chr2_1:16826826-16826845 | None:intergenic | 60.0% |
| !! | TGGTTGAGAGGGGTTGGTGG+TGG | + | chr2_1:16826830-16826849 | None:intergenic | 60.0% |
| GGAATCGCGGTGGTTGAGAG+GGG | + | chr2_1:16826840-16826859 | None:intergenic | 60.0% | |
| CGGAATCGCGGTGGTTGAGA+GGG | + | chr2_1:16826841-16826860 | None:intergenic | 60.0% | |
| TCGGAATCGCGGTGGTTGAG+AGG | + | chr2_1:16826842-16826861 | None:intergenic | 60.0% | |
| GACTGATGTCGGAATCGCGG+TGG | + | chr2_1:16826850-16826869 | None:intergenic | 60.0% | |
| AGGGGATTCCGACGGAGGAA+GGG | + | chr2_1:16826886-16826905 | None:intergenic | 60.0% | |
| GAATGAGGGGATTCCGACGG+AGG | + | chr2_1:16826891-16826910 | None:intergenic | 60.0% | |
| ACCCTGCTACCCCGCATCAA+TGG | - | chr2_1:16827154-16827173 | Msa0198230:three_prime_UTR | 60.0% | |
| GCCATTGATGCGGGGTAGCA+GGG | + | chr2_1:16827158-16827177 | None:intergenic | 60.0% | |
| ! | GTTGGAGGCGCAATTGGAGG+AGG | - | chr2_1:16827434-16827453 | Msa0198230:CDS | 60.0% |
| GAGATCCGCGCCGTCTAAGA+AGG | - | chr2_1:16827458-16827477 | Msa0198230:CDS | 60.0% | |
| !! | GCCGTTGGAGAGGGTTTTGG+CGG | - | chr2_1:16827566-16827585 | Msa0198230:intron | 60.0% |
| !! | GGAGAGGGTTTTGGCGGAGA+AGG | - | chr2_1:16827572-16827591 | Msa0198230:intron | 60.0% |
| GCAATTGGAGGCGAAGGTGG+TGG | - | chr2_1:16827599-16827618 | Msa0198230:intron | 60.0% | |
| CACGCTGTTGAGAGGGATGC+TGG | - | chr2_1:16827720-16827739 | Msa0198230:intron | 60.0% | |
| TGAGAGGGATGCTGGTGAGG+CGG | - | chr2_1:16827728-16827747 | Msa0198230:intron | 60.0% | |
| ! | CTGGTGAGGCGGAACTTGCT+AGG | - | chr2_1:16827739-16827758 | Msa0198230:intron | 60.0% |
| TCAGCAGGCGTGGTTCCCTT+GGG | + | chr2_1:16828266-16828285 | None:intergenic | 60.0% | |
| TTCAGCAGGCGTGGTTCCCT+TGG | + | chr2_1:16828267-16828286 | None:intergenic | 60.0% | |
| !! | TTTGGGTTGGCGACGGTGGG+TGG | + | chr2_1:16826792-16826811 | None:intergenic | 65.0% |
| CGGTGGTTGAGAGGGGTTGG+TGG | + | chr2_1:16826833-16826852 | None:intergenic | 65.0% | |
| TCGCGGTGGTTGAGAGGGGT+TGG | + | chr2_1:16826836-16826855 | None:intergenic | 65.0% | |
| GGATTCCGACGGAGGAAGGG+CGG | + | chr2_1:16826883-16826902 | None:intergenic | 65.0% | |
| GAGGGGATTCCGACGGAGGA+AGG | + | chr2_1:16826887-16826906 | None:intergenic | 65.0% | |
| GGCCATTGATGCGGGGTAGC+AGG | + | chr2_1:16827159-16827178 | None:intergenic | 65.0% | |
| !! | TCAGAGTGGTGCTGGCCTGC+AGG | - | chr2_1:16828645-16828664 | Msa0198230:intron | 65.0% |
| TGCGGCCCATACGGATGCAC+AGG | + | chr2_1:16828785-16828804 | None:intergenic | 65.0% | |
| AGCAGCCGCCCTTCCTCCGT+CGG | - | chr2_1:16826875-16826894 | Msa0198230:three_prime_UTR | 70.0% | |
| ! | TGGCGACGGTGGGTGGCGGT+GGG | + | chr2_1:16826785-16826804 | None:intergenic | 75.0% |
| ! | TTGGCGACGGTGGGTGGCGG+TGG | + | chr2_1:16826786-16826805 | None:intergenic | 75.0% |
| ! | GGGTTGGCGACGGTGGGTGG+CGG | + | chr2_1:16826789-16826808 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 16826773 | 16832222 | 16826773 | ID=Msa0198230;Name=Msa0198230 |
| chr2_1 | mRNA | 16826773 | 16832222 | 16826773 | ID=Msa0198230-mRNA-1;Parent=Msa0198230;Name=Msa0198230-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0.8|0.66|1|0.8|0.66|6|435|538 |
| chr2_1 | exon | 16826773 | 16827057 | 16826773 | ID=Msa0198230-mRNA-1:exon:7011;Parent=Msa0198230-mRNA-1 |
| chr2_1 | exon | 16827109 | 16827507 | 16827109 | ID=Msa0198230-mRNA-1:exon:7010;Parent=Msa0198230-mRNA-1 |
| chr2_1 | exon | 16828029 | 16828175 | 16828029 | ID=Msa0198230-mRNA-1:exon:7009;Parent=Msa0198230-mRNA-1 |
| chr2_1 | exon | 16830523 | 16830769 | 16830523 | ID=Msa0198230-mRNA-1:exon:7008;Parent=Msa0198230-mRNA-1 |
| chr2_1 | exon | 16831133 | 16831672 | 16831133 | ID=Msa0198230-mRNA-1:exon:7007;Parent=Msa0198230-mRNA-1 |
| chr2_1 | exon | 16831789 | 16832222 | 16831789 | ID=Msa0198230-mRNA-1:exon:7006;Parent=Msa0198230-mRNA-1 |
| chr2_1 | CDS | 16831789 | 16832222 | 16831789 | ID=Msa0198230-mRNA-1:cds;Parent=Msa0198230-mRNA-1 |
| chr2_1 | CDS | 16831133 | 16831672 | 16831133 | ID=Msa0198230-mRNA-1:cds;Parent=Msa0198230-mRNA-1 |
| chr2_1 | CDS | 16830523 | 16830769 | 16830523 | ID=Msa0198230-mRNA-1:cds;Parent=Msa0198230-mRNA-1 |
| chr2_1 | CDS | 16828029 | 16828175 | 16828029 | ID=Msa0198230-mRNA-1:cds;Parent=Msa0198230-mRNA-1 |
| chr2_1 | CDS | 16827259 | 16827507 | 16827259 | ID=Msa0198230-mRNA-1:cds;Parent=Msa0198230-mRNA-1 |
| chr2_1 | three_prime_UTR | 16827109 | 16827258 | 16827109 | ID=Msa0198230-mRNA-1:three_prime_utr;Parent=Msa0198230-mRNA-1 |
| chr2_1 | three_prime_UTR | 16826773 | 16827057 | 16826773 | ID=Msa0198230-mRNA-1:three_prime_utr;Parent=Msa0198230-mRNA-1 |
| Gene Sequence |
| Protein sequence |
