Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1170350 | XP_003594432.1 | 90.641 | 577 | 24 | 2 | 1 | 549 | 1 | 575 | 0.0 | 1027 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1170350 | sp|Q9M1G5|NDC80_ARATH | 43.470 | 536 | 269 | 6 | 24 | 531 | 33 | 562 | 4.33e-145 | 432 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1170350 | G7IFT2 | 90.641 | 577 | 24 | 2 | 1 | 549 | 1 | 575 | 0.0 | 1027 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0106620 | Msa1170350 | 0.815432 | 9.274801e-52 | -8.615850e-47 |
| Msa0106710 | Msa1170350 | 0.800972 | 1.121554e-48 | -8.615850e-47 |
| Msa0619050 | Msa1170350 | 0.800493 | 1.404512e-48 | -8.615850e-47 |
| Msa0632370 | Msa1170350 | 0.804214 | 2.405406e-49 | -8.615850e-47 |
| Msa0658590 | Msa1170350 | 0.800236 | 1.584432e-48 | -8.615850e-47 |
| Msa0138370 | Msa1170350 | 0.840008 | 1.126150e-57 | -8.615850e-47 |
| Msa0198130 | Msa1170350 | 0.881073 | 3.248343e-70 | -8.615850e-47 |
| Msa0198230 | Msa1170350 | 0.865545 | 5.462508e-65 | -8.615850e-47 |
| Msa0232020 | Msa1170350 | 0.800852 | 1.186478e-48 | -8.615850e-47 |
| Msa0237210 | Msa1170350 | 0.820078 | 8.295067e-53 | -8.615850e-47 |
| Msa1027990 | Msa1170350 | 0.810964 | 8.869233e-51 | -8.615850e-47 |
| Msa0278330 | Msa1170350 | 0.924069 | 1.152564e-89 | -8.615850e-47 |
| Msa0278350 | Msa1170350 | 0.864930 | 8.531795e-65 | -8.615850e-47 |
| Msa0278370 | Msa1170350 | 0.924789 | 4.402412e-90 | -8.615850e-47 |
| Msa0278450 | Msa1170350 | 0.951298 | 2.742328e-109 | -8.615850e-47 |
| Msa0279710 | Msa1170350 | 0.801067 | 1.072291e-48 | -8.615850e-47 |
| Msa0315690 | Msa1170350 | 0.816843 | 4.485899e-52 | -8.615850e-47 |
| Msa0328080 | Msa1170350 | 0.866938 | 1.976267e-65 | -8.615850e-47 |
| Msa0328150 | Msa1170350 | 0.921521 | 3.217026e-88 | -8.615850e-47 |
| Msa1170350 | Msa1186020 | 0.809950 | 1.468347e-50 | -8.615850e-47 |
| Msa1170350 | Msa1236160 | -0.810326 | 1.218758e-50 | -8.615850e-47 |
| Msa1170350 | Msa1238820 | 0.806235 | 9.075523e-50 | -8.615850e-47 |
| Msa1170350 | Msa1320670 | 0.825834 | 3.775900e-54 | -8.615850e-47 |
| Msa1170350 | Msa1345810 | 0.829447 | 5.123025e-55 | -8.615850e-47 |
| Msa1170350 | Msa1355450 | 0.811716 | 6.093039e-51 | -8.615850e-47 |
| Msa1170350 | Msa1392580 | 0.805612 | 1.227185e-49 | -8.615850e-47 |
| Msa0483100 | Msa1170350 | 0.817472 | 3.240146e-52 | -8.615850e-47 |
| Msa0534720 | Msa1170350 | 0.822121 | 2.806678e-53 | -8.615850e-47 |
| Msa0579660 | Msa1170350 | 0.806351 | 8.582497e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1170350 | MtrunA17_Chr2g0291491 | 90.641 | 577 | 24 | 2 | 1 | 549 | 1 | 575 | 0.0 | 1027 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1170350 | AT3G54630.1 | 43.470 | 536 | 269 | 6 | 24 | 531 | 33 | 562 | 4.40e-146 | 432 |
Find 146 sgRNAs with CRISPR-Local
Find 265 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATAACAATAATATTCTATT+TGG | 0.158248 | 7_4:+63531709 | Msa1170350:CDS |
| ATTGATTTATTAAGTTTAAA+AGG | 0.160827 | 7_4:-63531565 | None:intergenic |
| GGAGTTCGGTGAGGAAAATT+AGG | 0.203771 | 7_4:-63531480 | None:intergenic |
| TGGAAGGTAGGAAGTGTCTT+TGG | 0.259688 | 7_4:-63531248 | None:intergenic |
| CATAAGATAATTGAGGAGTT+TGG | 0.260608 | 7_4:+63531973 | Msa1170350:CDS |
| TTGGCGACGGTGGGTGGCGG+TGG | 0.276135 | 7_4:-63531224 | None:intergenic |
| GAGAAGTTCGGTGGTGAAAT+TGG | 0.292249 | 7_4:+63532794 | Msa1170350:CDS |
| TGAGCCGTTGGAGAGGGTTT+TGG | 0.311584 | 7_4:+63532005 | Msa1170350:CDS |
| ATGAATACACGAGCAAAATA+TGG | 0.313368 | 7_4:-63534921 | None:intergenic |
| ATAAGATAATTGAGGAGTTT+GGG | 0.338703 | 7_4:+63531974 | Msa1170350:CDS |
| TTCAGCAGGCGTGGTTCCCT+TGG | 0.339122 | 7_4:-63532706 | None:intergenic |
| GGAAGGTAGGAAGTGTCTTT+GGG | 0.347036 | 7_4:-63531247 | None:intergenic |
| GGCCATTGATGCGGGGTAGC+AGG | 0.360117 | 7_4:-63531598 | None:intergenic |
| CAATGCTTTGTCTTATTCAC+TGG | 0.360486 | 7_4:+63531623 | Msa1170350:CDS |
| TGATCATGATGTGGGCATTA+TGG | 0.365375 | 7_4:+63533691 | Msa1170350:CDS |
| GTCTGTTGCTGAGGAGAAAC+TGG | 0.366375 | 7_4:+63531828 | Msa1170350:CDS |
| TGACGAGGCTATTCTTGATA+TGG | 0.379772 | 7_4:+63531771 | Msa1170350:CDS |
| GTCTTTGGGTTGGCGACGGT+GGG | 0.391931 | 7_4:-63531233 | None:intergenic |
| GAGTTCGGTGAGGAAAATTA+GGG | 0.399786 | 7_4:-63531479 | None:intergenic |
| TGGTTGAGAGGGGTTGGTGG+TGG | 0.400749 | 7_4:-63531268 | None:intergenic |
| TTAGATTGAAGGCACAATAC+TGG | 0.401443 | 7_4:+63535013 | Msa1170350:three_prime_UTR |
| GTCCGACATCTTCTTAGCTT+CGG | 0.401875 | 7_4:-63533654 | None:intergenic |
| GCATCTTTACATCAAATTGA+TGG | 0.403182 | 7_4:-63534950 | None:intergenic |
| GGCATCTGAATTGAAGTTGC+AGG | 0.406818 | 7_4:+63534412 | Msa1170350:intron |
| TTGAAGAGTTTGAGAAGTAA+AGG | 0.409288 | 7_4:-63531538 | None:intergenic |
| GGGTTGGCGACGGTGGGTGG+CGG | 0.420965 | 7_4:-63531227 | None:intergenic |
| TGAATAAGACAAAGCATTGA+AGG | 0.425794 | 7_4:-63531619 | None:intergenic |
| TGTTGAGTTGGAGGCGCAAT+TGG | 0.435358 | 7_4:+63531870 | Msa1170350:CDS |
| TCACTAGCTGGAAACTCAAA+TGG | 0.437352 | 7_4:+63533586 | Msa1170350:intron |
| CGGAACTTGCTAGGAATGCT+TGG | 0.439222 | 7_4:+63532190 | Msa1170350:CDS |
| AGGGGTTGGTGGTGGAAGGT+AGG | 0.444653 | 7_4:-63531260 | None:intergenic |
| TTGATTTATTAAGTTTAAAA+GGG | 0.447323 | 7_4:-63531564 | None:intergenic |
| TGCGATTGCGGATTGTTGAT+AGG | 0.448386 | 7_4:-63531371 | None:intergenic |
| GAAATTGTGAGAGGCGAGGA+AGG | 0.448991 | 7_4:-63531404 | None:intergenic |
| AACCACGCCTGCTGAAATCA+TGG | 0.451028 | 7_4:+63532713 | Msa1170350:CDS |
| TACGTGCATCATTAGATTGA+AGG | 0.458764 | 7_4:+63535002 | Msa1170350:three_prime_UTR |
| TGAGAGGGGTTGGTGGTGGA+AGG | 0.460898 | 7_4:-63531264 | None:intergenic |
| GAATGTGGTTAATTGAAAGT+AGG | 0.462877 | 7_4:+63534736 | Msa1170350:three_prime_UTR |
| GAATGTGGTTAATTGAAAGT+AGG | 0.462877 | 7_4:+63534827 | Msa1170350:three_prime_UTR |
| TGTGCTTCTAGGTTGAAGAT+TGG | 0.463038 | 7_4:+63532657 | Msa1170350:intron |
| GGCGGAGAAGGAGAAGCAAT+TGG | 0.464127 | 7_4:+63532026 | Msa1170350:CDS |
| TCAGCAGGCGTGGTTCCCTT+GGG | 0.464966 | 7_4:-63532705 | None:intergenic |
| AACGGGAAATTCAAGGAGTT+CGG | 0.466119 | 7_4:-63531494 | None:intergenic |
| ACCCTGCTACCCCGCATCAA+TGG | 0.472909 | 7_4:+63531596 | Msa1170350:CDS |
| TGTCTTTGGGTTGGCGACGG+TGG | 0.473790 | 7_4:-63531234 | None:intergenic |
| TGAGAAAGAGAAGGCTGTGT+TGG | 0.474513 | 7_4:+63531930 | Msa1170350:CDS |
| AGAGGCGAGGAAGGAGTTGA+TGG | 0.475835 | 7_4:-63531395 | None:intergenic |
| GAGGGGATTCCGACGGAGGA+AGG | 0.476947 | 7_4:-63531325 | None:intergenic |
| TGAGGAAAATTAGGGTTTCG+TGG | 0.477520 | 7_4:-63531471 | None:intergenic |
| TCGCGGTGGTTGAGAGGGGT+TGG | 0.479818 | 7_4:-63531274 | None:intergenic |
| TCGACGAATTCGAGAGAGAT+AGG | 0.483008 | 7_4:-63531669 | None:intergenic |
| GCATTGAAGGCCATTGATGC+GGG | 0.484798 | 7_4:-63531606 | None:intergenic |
| TGGCGACGGTGGGTGGCGGT+GGG | 0.488231 | 7_4:-63531223 | None:intergenic |
| GGTGGTGAAATTGGAAGAGT+TGG | 0.490182 | 7_4:+63532803 | Msa1170350:CDS |
| CGGAATCGCGGTGGTTGAGA+GGG | 0.491653 | 7_4:-63531279 | None:intergenic |
| CGGTGGTTGAGAGGGGTTGG+TGG | 0.491912 | 7_4:-63531271 | None:intergenic |
| TTTGGGTTGGCGACGGTGGG+TGG | 0.492725 | 7_4:-63531230 | None:intergenic |
| GGATGTGGAGAGGATGAAGA+AGG | 0.500189 | 7_4:+63532134 | Msa1170350:CDS |
| TGGGTCAAGGATTGAGCCGT+TGG | 0.504005 | 7_4:+63531993 | Msa1170350:CDS |
| TCGTGGATTTGTTTAGCGGA+AGG | 0.505891 | 7_4:-63531454 | None:intergenic |
| GGAGAAGCAATTGGAGGCGA+AGG | 0.507967 | 7_4:+63532035 | Msa1170350:CDS |
| GCAATTGGAGGCGAAGGTGG+TGG | 0.508621 | 7_4:+63532041 | Msa1170350:CDS |
| GCAAACTGTTGTTGAGTTGG+AGG | 0.509033 | 7_4:+63531861 | Msa1170350:CDS |
| GAGATCCGCGCCGTCTAAGA+AGG | 0.509647 | 7_4:+63531900 | Msa1170350:CDS |
| TCAAGCTCATCCTTCTTAGA+CGG | 0.509935 | 7_4:-63531910 | None:intergenic |
| CTGGTGAGGCGGAACTTGCT+AGG | 0.511152 | 7_4:+63532181 | Msa1170350:CDS |
| GAGGATTGTTGAGGAGAATG+AGG | 0.511952 | 7_4:+63532071 | Msa1170350:CDS |
| CACGCTGTTGAGAGGGATGC+TGG | 0.512009 | 7_4:+63532162 | Msa1170350:CDS |
| AGCAGCCGCCCTTCCTCCGT+CGG | 0.512411 | 7_4:+63531316 | Msa1170350:CDS |
| GTCTTTGTAAAGGTCGAATG+AGG | 0.513877 | 7_4:-63531344 | None:intergenic |
| CGAAGGTGGTGGAGAATGAG+AGG | 0.518233 | 7_4:+63532052 | Msa1170350:CDS |
| AGGGGATTCCGACGGAGGAA+GGG | 0.518465 | 7_4:-63531324 | None:intergenic |
| TGAGTTGGAGGCGCAATTGG+AGG | 0.523011 | 7_4:+63531873 | Msa1170350:CDS |
| GATAGGAACGGTCTTTGTAA+AGG | 0.523078 | 7_4:-63531354 | None:intergenic |
| TGAGCAAACTGTTGTTGAGT+TGG | 0.525689 | 7_4:+63531858 | Msa1170350:CDS |
| AAAATATAGTTATATATTGG+AGG | 0.526340 | 7_4:+63534610 | Msa1170350:CDS |
| TCAGCATAGGATTCAAGCAC+AGG | 0.527543 | 7_4:-63532762 | None:intergenic |
| GGAACTTGCTAGGAATGCTT+GGG | 0.527690 | 7_4:+63532191 | Msa1170350:CDS |
| CTCAAAGTATAAAGAACATG+TGG | 0.527765 | 7_4:+63534505 | Msa1170350:CDS |
| GCCATTGATGCGGGGTAGCA+GGG | 0.530312 | 7_4:-63531597 | None:intergenic |
| GTGGATTTGTTTAGCGGAAG+GGG | 0.530909 | 7_4:-63531452 | None:intergenic |
| AAGTGTCTTTGGGTTGGCGA+CGG | 0.533107 | 7_4:-63531237 | None:intergenic |
| CCACATCATGATCAGCTAGC+TGG | 0.533202 | 7_4:-63533682 | None:intergenic |
| CGTGGATTTGTTTAGCGGAA+GGG | 0.535425 | 7_4:-63531453 | None:intergenic |
| GGTTTCGTGGATTTGTTTAG+CGG | 0.537126 | 7_4:-63531458 | None:intergenic |
| TCTCTTGATGTCATCAGCAT+AGG | 0.537512 | 7_4:-63532775 | None:intergenic |
| TCAAAACCCATGATTTCAGC+AGG | 0.541601 | 7_4:-63532720 | None:intergenic |
| GGAGTTGATGGTTGCGATTG+CGG | 0.543181 | 7_4:-63531383 | None:intergenic |
| TCGGAATCGCGGTGGTTGAG+AGG | 0.548735 | 7_4:-63531280 | None:intergenic |
| AAGGATTGAGCCGTTGGAGA+GGG | 0.549405 | 7_4:+63531999 | Msa1170350:CDS |
| TAAGTTTCATAAGATAATTG+AGG | 0.549470 | 7_4:+63531966 | Msa1170350:CDS |
| TGATGACATCAAGAGAAGTT+CGG | 0.549998 | 7_4:+63532782 | Msa1170350:CDS |
| GTTGGAGGCGCAATTGGAGG+AGG | 0.550019 | 7_4:+63531876 | Msa1170350:CDS |
| GAGAAGATTTGAAAGAGATG+TGG | 0.554044 | 7_4:-63531426 | None:intergenic |
| TGAGGAGCTTAAGACGAAAG+TGG | 0.557541 | 7_4:+63532089 | Msa1170350:CDS |
| ACCCATGATTTCAGCAGGCG+TGG | 0.557805 | 7_4:-63532715 | None:intergenic |
| ATTTGTTTAGCGGAAGGGGA+AGG | 0.562432 | 7_4:-63531448 | None:intergenic |
| AAAGAGAAGGCTGTGTTGGA+AGG | 0.564662 | 7_4:+63531934 | Msa1170350:CDS |
| GGTAGGAAGTGTCTTTGGGT+TGG | 0.569598 | 7_4:-63531243 | None:intergenic |
| AGCATTGAAGGCCATTGATG+CGG | 0.572473 | 7_4:-63531607 | None:intergenic |
| GGATTCCGACGGAGGAAGGG+CGG | 0.574947 | 7_4:-63531321 | None:intergenic |
| TCAGTATGTGTTGAATCCCA+AGG | 0.575703 | 7_4:+63532689 | Msa1170350:CDS |
| TCATGAGAAGTCTGTTGCTG+AGG | 0.576689 | 7_4:+63531819 | Msa1170350:CDS |
| CGAGGCTATTCTTGATATGG+AGG | 0.579105 | 7_4:+63531774 | Msa1170350:CDS |
| GAGCAAAATATGGAGCTGAA+TGG | 0.581103 | 7_4:-63534911 | None:intergenic |
| TCTTTGTAAAGGTCGAATGA+GGG | 0.585965 | 7_4:-63531343 | None:intergenic |
| GCTGCTGACGAGACTGATGT+CGG | 0.586008 | 7_4:-63531299 | None:intergenic |
| GAAGCAATTGGAGGCGAAGG+TGG | 0.589483 | 7_4:+63532038 | Msa1170350:CDS |
| TAATTGAGGAGTTTGGGTCA+AGG | 0.591021 | 7_4:+63531980 | Msa1170350:CDS |
| TGTGGAAATTGTGAGAGGCG+AGG | 0.592842 | 7_4:-63531408 | None:intergenic |
| GGAGTTGCACGCTGTTGAGA+GGG | 0.593133 | 7_4:+63532155 | Msa1170350:CDS |
| ACCACGCCTGCTGAAATCAT+GGG | 0.594180 | 7_4:+63532714 | Msa1170350:CDS |
| AGGAGTTGCACGCTGTTGAG+AGG | 0.594789 | 7_4:+63532154 | Msa1170350:CDS |
| CCAGCTAGCTGATCATGATG+TGG | 0.595217 | 7_4:+63533682 | Msa1170350:CDS |
| GAAGAAATTCAAATGCATGC+CGG | 0.605310 | 7_4:+63534455 | Msa1170350:CDS |
| TTGCGGATTGTTGATAGGAA+CGG | 0.605871 | 7_4:-63531366 | None:intergenic |
| GGAGAAGGAGAAGCAATTGG+AGG | 0.606698 | 7_4:+63532029 | Msa1170350:CDS |
| TGTTGAGAGGGATGCTGGTG+AGG | 0.608981 | 7_4:+63532167 | Msa1170350:CDS |
| CAAGGATTGAGCCGTTGGAG+AGG | 0.615648 | 7_4:+63531998 | Msa1170350:CDS |
| AAAGTTTCAGAGATTAGAAG+CGG | 0.616241 | 7_4:+63534533 | Msa1170350:CDS |
| GGAATCGCGGTGGTTGAGAG+GGG | 0.616778 | 7_4:-63531278 | None:intergenic |
| AGTCCGCTGAAAATGCTGCT+AGG | 0.618268 | 7_4:+63532841 | Msa1170350:CDS |
| AAGTTTCAGAGATTAGAAGC+GGG | 0.618896 | 7_4:+63534534 | Msa1170350:CDS |
| CTTTGTAAAGGTCGAATGAG+GGG | 0.618950 | 7_4:-63531342 | None:intergenic |
| ACTTGCTAGGAATGCTTGGG+AGG | 0.620037 | 7_4:+63532194 | Msa1170350:CDS |
| GGATGAGCTTGAGAAAGAGA+AGG | 0.627265 | 7_4:+63531921 | Msa1170350:CDS |
| TATGGAAAGAGAGGCAGCTG+AGG | 0.628545 | 7_4:+63533709 | Msa1170350:CDS |
| CAGTATGTGTTGAATCCCAA+GGG | 0.630232 | 7_4:+63532690 | Msa1170350:CDS |
| CATGATAAAGAAAGAAACAC+AGG | 0.630583 | 7_4:+63533610 | Msa1170350:CDS |
| CTCATCCTTCTTAGACGGCG+CGG | 0.632977 | 7_4:-63531905 | None:intergenic |
| TCAAAGTATAAAGAACATGT+GGG | 0.633300 | 7_4:+63534506 | Msa1170350:CDS |
| CAGCTAGCTGATCATGATGT+GGG | 0.635721 | 7_4:+63533683 | Msa1170350:CDS |
| TGTGGGCATTATGGAAAGAG+AGG | 0.640887 | 7_4:+63533700 | Msa1170350:CDS |
| GAATGAGGGGATTCCGACGG+AGG | 0.648475 | 7_4:-63531329 | None:intergenic |
| CGAGACTGATGTCGGAATCG+CGG | 0.650272 | 7_4:-63531291 | None:intergenic |
| TTAATGCGAGGGATGTGGAG+AGG | 0.655098 | 7_4:+63532124 | Msa1170350:CDS |
| TCCGCCAAAACCCTCTCCAA+CGG | 0.655375 | 7_4:-63532009 | None:intergenic |
| GTCGAATGAGGGGATTCCGA+CGG | 0.660588 | 7_4:-63531332 | None:intergenic |
| GACTGATGTCGGAATCGCGG+TGG | 0.661612 | 7_4:-63531288 | None:intergenic |
| TGCCGAAGCTAAGAAGATGT+CGG | 0.664082 | 7_4:+63533652 | Msa1170350:CDS |
| GGAGAATGAGAGGATTGTTG+AGG | 0.664358 | 7_4:+63532062 | Msa1170350:CDS |
| CATTGAAGGCCATTGATGCG+GGG | 0.679311 | 7_4:-63531605 | None:intergenic |
| TGAGAGGGATGCTGGTGAGG+CGG | 0.679707 | 7_4:+63532170 | Msa1170350:CDS |
| TGACATCAAGAGAAGTTCGG+TGG | 0.704206 | 7_4:+63532785 | Msa1170350:CDS |
| AGAGATGTGGAAATTGTGAG+AGG | 0.708472 | 7_4:-63531413 | None:intergenic |
| GAAATTCAAGGAGTTCGGTG+AGG | 0.740280 | 7_4:-63531489 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATAATAATATTAATAAT+AGG | + | chr7_4:63533278-63533297 | Msa1170350:intron | 0.0% |
| !! | TTGATTTATTAAGTTTAAAA+GGG | - | chr7_4:63531567-63531586 | None:intergenic | 10.0% |
| !!! | ATTGATTTATTAAGTTTAAA+AGG | - | chr7_4:63531568-63531587 | None:intergenic | 10.0% |
| !!! | AATTATCTTAATTTTATTAG+AGG | + | chr7_4:63531745-63531764 | Msa1170350:CDS | 10.0% |
| !! | AAAATTAAAATGCTATTAAA+AGG | + | chr7_4:63533394-63533413 | Msa1170350:intron | 10.0% |
| !!! | ATATATAACTATATTTTTCT+GGG | - | chr7_4:63534607-63534626 | None:intergenic | 10.0% |
| !!! | AATATATAACTATATTTTTC+TGG | - | chr7_4:63534608-63534627 | None:intergenic | 10.0% |
| !! | AGAAAAATATAGTTATATAT+TGG | + | chr7_4:63534607-63534626 | Msa1170350:CDS | 10.0% |
| !! | CATAACAATAATATTCTATT+TGG | + | chr7_4:63531709-63531728 | Msa1170350:CDS | 15.0% |
| !! | ACAAATGATTATAATACAAA+CGG | - | chr7_4:63532344-63532363 | None:intergenic | 15.0% |
| !!! | AGCATTTTAATTTTGTTTTT+CGG | - | chr7_4:63533388-63533407 | None:intergenic | 15.0% |
| !!! | TTGTGTTTCAATTATTTTTT+TGG | + | chr7_4:63533989-63534008 | Msa1170350:intron | 15.0% |
| !! | AAAATATAGTTATATATTGG+AGG | + | chr7_4:63534610-63534629 | Msa1170350:CDS | 15.0% |
| !! | GTATACAAATATATTCTATT+TGG | + | chr7_4:63535067-63535086 | Msa1170350:intron | 15.0% |
| !! | TAAGTTTCATAAGATAATTG+AGG | + | chr7_4:63531966-63531985 | Msa1170350:CDS | 20.0% |
| !! | ATAATCAATCTAAGAAAACT+AGG | - | chr7_4:63533001-63533020 | None:intergenic | 20.0% |
| !! | AAAAAATCCAAAAACTAAAC+TGG | - | chr7_4:63533940-63533959 | None:intergenic | 20.0% |
| !! | TAGTAAATGATAATCAAACT+GGG | + | chr7_4:63534133-63534152 | Msa1170350:intron | 20.0% |
| !!! | AACTTTTTATATTGTTGTCA+AGG | + | chr7_4:63534391-63534410 | Msa1170350:intron | 20.0% |
| !! | AATCAACTTAAAAAGTTTAC+CGG | - | chr7_4:63534477-63534496 | None:intergenic | 20.0% |
| !!! | ATTCAATTCTCTGAATTTTA+CGG | - | chr7_4:63534640-63534659 | None:intergenic | 20.0% |
| !!! | CTTTTAAATATGAATGAATG+TGG | + | chr7_4:63534721-63534740 | Msa1170350:three_prime_UTR | 20.0% |
| !!! | AAAGTAGGTTTTTTAGTATT+GGG | + | chr7_4:63534751-63534770 | Msa1170350:three_prime_UTR | 20.0% |
| !!! | CTTTTAAATATGAATGAATG+TGG | + | chr7_4:63534721-63534740 | Msa1170350:three_prime_UTR | 20.0% |
| !!! | AAAGTAGGTTTTTTAGTATT+GGG | + | chr7_4:63534751-63534770 | Msa1170350:three_prime_UTR | 20.0% |
| !! | TAAAAAGAATGTTCAAATGA+AGG | - | chr7_4:63535121-63535140 | None:intergenic | 20.0% |
| ! | ATAAGATAATTGAGGAGTTT+GGG | + | chr7_4:63531974-63531993 | Msa1170350:CDS | 25.0% |
| ! | AAGAAAAAAAAACCTCCTAA+GGG | - | chr7_4:63532298-63532317 | None:intergenic | 25.0% |
| ! | AAAGAAAAAAAAACCTCCTA+AGG | - | chr7_4:63532299-63532318 | None:intergenic | 25.0% |
| ! | TACAAAATGTTGTCAAATAG+TGG | + | chr7_4:63532434-63532453 | Msa1170350:intron | 25.0% |
| ! | CTTGTGTGTTAATGTTAATA+GGG | + | chr7_4:63532604-63532623 | Msa1170350:intron | 25.0% |
| ! | GTTACTTAAACTATGTACTT+TGG | - | chr7_4:63533310-63533329 | None:intergenic | 25.0% |
| ! | ACATAAACATTGTCAGAAAA+GGG | - | chr7_4:63533465-63533484 | None:intergenic | 25.0% |
| ! | AACATAAACATTGTCAGAAA+AGG | - | chr7_4:63533466-63533485 | None:intergenic | 25.0% |
| ! | AGTTGTATTTGAACCAAATT+GGG | + | chr7_4:63533781-63533800 | Msa1170350:intron | 25.0% |
| ! | AATTGAAACACAAGATCAAT+GGG | - | chr7_4:63533982-63534001 | None:intergenic | 25.0% |
| ! | TAATTGAAACACAAGATCAA+TGG | - | chr7_4:63533983-63534002 | None:intergenic | 25.0% |
| ! | AAGAATATGAGTGCATAATT+TGG | + | chr7_4:63534029-63534048 | Msa1170350:intron | 25.0% |
| ! | CAGTTTGATTATCATTTACT+AGG | - | chr7_4:63534134-63534153 | None:intergenic | 25.0% |
| ! | CTAGTAAATGATAATCAAAC+TGG | + | chr7_4:63534132-63534151 | Msa1170350:intron | 25.0% |
| ! | ACAATGTTGTCACATAAATT+GGG | - | chr7_4:63534363-63534382 | None:intergenic | 25.0% |
| ! | TACAATGTTGTCACATAAAT+TGG | - | chr7_4:63534364-63534383 | None:intergenic | 25.0% |
| ! | TCAAAGTATAAAGAACATGT+GGG | + | chr7_4:63534506-63534525 | Msa1170350:CDS | 25.0% |
| !!! | GAAAGTAGGTTTTTTAGTAT+TGG | + | chr7_4:63534750-63534769 | Msa1170350:three_prime_UTR | 25.0% |
| !!! | GAAAGTAGGTTTTTTAGTAT+TGG | + | chr7_4:63534750-63534769 | Msa1170350:three_prime_UTR | 25.0% |
| !! | TTTTTGTAACGGGAAATTCA+AGG | - | chr7_4:63531504-63531523 | None:intergenic | 30.0% |
| ! | ATCGTCTTCGATTTTTGTAA+CGG | - | chr7_4:63531515-63531534 | None:intergenic | 30.0% |
| TTGAAGAGTTTGAGAAGTAA+AGG | - | chr7_4:63531541-63531560 | None:intergenic | 30.0% | |
| !! | TGAATAAGACAAAGCATTGA+AGG | - | chr7_4:63531622-63531641 | None:intergenic | 30.0% |
| CATAAGATAATTGAGGAGTT+TGG | + | chr7_4:63531973-63531992 | Msa1170350:CDS | 30.0% | |
| TATCTCAAAACAATAGCGTT+TGG | - | chr7_4:63532399-63532418 | None:intergenic | 30.0% | |
| TCAAATAGTGGTTGTTATAG+TGG | + | chr7_4:63532446-63532465 | Msa1170350:intron | 30.0% | |
| GCTTGTGTGTTAATGTTAAT+AGG | + | chr7_4:63532603-63532622 | Msa1170350:intron | 30.0% | |
| ATTATTTAAACATTGTCGCG+TGG | - | chr7_4:63533266-63533285 | None:intergenic | 30.0% | |
| TTAAACTATGTACTTTGGAC+TGG | - | chr7_4:63533305-63533324 | None:intergenic | 30.0% | |
| GTTTATGTTACACTCTTTGT+TGG | + | chr7_4:63533477-63533496 | Msa1170350:intron | 30.0% | |
| AACAAGCAGTAGAAAAGAAA+AGG | - | chr7_4:63533559-63533578 | None:intergenic | 30.0% | |
| !! | TTGTTGATTTATTCACTAGC+TGG | + | chr7_4:63533574-63533593 | Msa1170350:intron | 30.0% |
| CATGATAAAGAAAGAAACAC+AGG | + | chr7_4:63533610-63533629 | Msa1170350:CDS | 30.0% | |
| !!! | GAGGTTTTAAAGGTAATATC+TGG | + | chr7_4:63533728-63533747 | Msa1170350:intron | 30.0% |
| CAGTTGTATTTGAACCAAAT+TGG | + | chr7_4:63533780-63533799 | Msa1170350:intron | 30.0% | |
| GTTGTATTTGAACCAAATTG+GGG | + | chr7_4:63533782-63533801 | Msa1170350:intron | 30.0% | |
| TTGTATTTGAACCAAATTGG+GGG | + | chr7_4:63533783-63533802 | Msa1170350:intron | 30.0% | |
| TTATTGTGTTTCGATGAACT+TGG | + | chr7_4:63533868-63533887 | Msa1170350:intron | 30.0% | |
| AATATGCATTCCACATTGAT+TGG | + | chr7_4:63533903-63533922 | Msa1170350:intron | 30.0% | |
| AAGCTTGCAATAAAAAGGAA+TGG | - | chr7_4:63534104-63534123 | None:intergenic | 30.0% | |
| ! | TTCCTTTTTATTGCAAGCTT+TGG | + | chr7_4:63534104-63534123 | Msa1170350:intron | 30.0% |
| AATATCCATGTTGCTAAGTT+TGG | - | chr7_4:63534286-63534305 | None:intergenic | 30.0% | |
| ! | ATTGGGAAAGATTTAAAACG+AGG | - | chr7_4:63534346-63534365 | None:intergenic | 30.0% |
| CTCAAAGTATAAAGAACATG+TGG | + | chr7_4:63534505-63534524 | Msa1170350:CDS | 30.0% | |
| AAAGTTTCAGAGATTAGAAG+CGG | + | chr7_4:63534533-63534552 | Msa1170350:CDS | 30.0% | |
| GAATGTGGTTAATTGAAAGT+AGG | + | chr7_4:63534736-63534755 | Msa1170350:three_prime_UTR | 30.0% | |
| GAATGTGGTTAATTGAAAGT+AGG | + | chr7_4:63534736-63534755 | Msa1170350:three_prime_UTR | 30.0% | |
| ATGAATACACGAGCAAAATA+TGG | - | chr7_4:63534924-63534943 | None:intergenic | 30.0% | |
| GCATCTTTACATCAAATTGA+TGG | - | chr7_4:63534953-63534972 | None:intergenic | 30.0% | |
| TCTTTGTAAAGGTCGAATGA+GGG | - | chr7_4:63531346-63531365 | None:intergenic | 35.0% | |
| GAGAAGATTTGAAAGAGATG+TGG | - | chr7_4:63531429-63531448 | None:intergenic | 35.0% | |
| ! | TCGTCTTCGATTTTTGTAAC+GGG | - | chr7_4:63531514-63531533 | None:intergenic | 35.0% |
| ! | CAATGCTTTGTCTTATTCAC+TGG | + | chr7_4:63531623-63531642 | Msa1170350:CDS | 35.0% |
| AAATTGCTGCTATAGTCTAG+CGG | + | chr7_4:63532365-63532384 | Msa1170350:intron | 35.0% | |
| GTTTCATTTCATGTGCTTCT+AGG | + | chr7_4:63532646-63532665 | Msa1170350:intron | 35.0% | |
| TGATGACATCAAGAGAAGTT+CGG | + | chr7_4:63532782-63532801 | Msa1170350:CDS | 35.0% | |
| GGATAAAGATTGATTGTGTG+TGG | + | chr7_4:63533053-63533072 | Msa1170350:intron | 35.0% | |
| GGGTAATGTTGTTGAATTGA+TGG | + | chr7_4:63533135-63533154 | Msa1170350:intron | 35.0% | |
| CAACAACAAGTATGAAACAC+AGG | - | chr7_4:63533167-63533186 | None:intergenic | 35.0% | |
| ACTCTTTGTTGGAGTTAGAA+GGG | + | chr7_4:63533488-63533507 | Msa1170350:intron | 35.0% | |
| GTCAAACAACAGTCTTTACA+AGG | - | chr7_4:63533537-63533556 | None:intergenic | 35.0% | |
| AAACTAAACTGGCACGAAAT+TGG | - | chr7_4:63533929-63533948 | None:intergenic | 35.0% | |
| !!! | TTTCGTGCCAGTTTAGTTTT+TGG | + | chr7_4:63533930-63533949 | Msa1170350:intron | 35.0% |
| TACGAAAAACATGCTAGATG+TGG | - | chr7_4:63534070-63534089 | None:intergenic | 35.0% | |
| AGCCAAAGCTTGCAATAAAA+AGG | - | chr7_4:63534109-63534128 | None:intergenic | 35.0% | |
| TGTAGTAACGAGTTAGTTCA+AGG | + | chr7_4:63534239-63534258 | Msa1170350:intron | 35.0% | |
| GTAGTAACGAGTTAGTTCAA+GGG | + | chr7_4:63534240-63534259 | Msa1170350:intron | 35.0% | |
| TGGAGATAGTTTAAGCTTGA+TGG | - | chr7_4:63534266-63534285 | None:intergenic | 35.0% | |
| TATCTCCAAACTTAGCAACA+TGG | + | chr7_4:63534278-63534297 | Msa1170350:intron | 35.0% | |
| GAAGAAATTCAAATGCATGC+CGG | + | chr7_4:63534455-63534474 | Msa1170350:CDS | 35.0% | |
| AAGTTTCAGAGATTAGAAGC+GGG | + | chr7_4:63534534-63534553 | Msa1170350:CDS | 35.0% | |
| TACGTGCATCATTAGATTGA+AGG | + | chr7_4:63535002-63535021 | Msa1170350:three_prime_UTR | 35.0% | |
| ! | TTAGATTGAAGGCACAATAC+TGG | + | chr7_4:63535013-63535032 | Msa1170350:three_prime_UTR | 35.0% |
| CTTTGTAAAGGTCGAATGAG+GGG | - | chr7_4:63531345-63531364 | None:intergenic | 40.0% | |
| GTCTTTGTAAAGGTCGAATG+AGG | - | chr7_4:63531347-63531366 | None:intergenic | 40.0% | |
| GATAGGAACGGTCTTTGTAA+AGG | - | chr7_4:63531357-63531376 | None:intergenic | 40.0% | |
| ! | TTGCGGATTGTTGATAGGAA+CGG | - | chr7_4:63531369-63531388 | None:intergenic | 40.0% |
| AGAGATGTGGAAATTGTGAG+AGG | - | chr7_4:63531416-63531435 | None:intergenic | 40.0% | |
| ! | GGTTTCGTGGATTTGTTTAG+CGG | - | chr7_4:63531461-63531480 | None:intergenic | 40.0% |
| TGAGGAAAATTAGGGTTTCG+TGG | - | chr7_4:63531474-63531493 | None:intergenic | 40.0% | |
| ! | GAGTTCGGTGAGGAAAATTA+GGG | - | chr7_4:63531482-63531501 | None:intergenic | 40.0% |
| AACGGGAAATTCAAGGAGTT+CGG | - | chr7_4:63531497-63531516 | None:intergenic | 40.0% | |
| ! | TTTTATTAGAGGCGATGACG+AGG | + | chr7_4:63531756-63531775 | Msa1170350:CDS | 40.0% |
| TGACGAGGCTATTCTTGATA+TGG | + | chr7_4:63531771-63531790 | Msa1170350:CDS | 40.0% | |
| TGAGCAAACTGTTGTTGAGT+TGG | + | chr7_4:63531858-63531877 | Msa1170350:CDS | 40.0% | |
| TCAAGCTCATCCTTCTTAGA+CGG | - | chr7_4:63531913-63531932 | None:intergenic | 40.0% | |
| TAATTGAGGAGTTTGGGTCA+AGG | + | chr7_4:63531980-63531999 | Msa1170350:CDS | 40.0% | |
| ! | AGTTGCAGACTTTTAATGCG+AGG | + | chr7_4:63532112-63532131 | Msa1170350:CDS | 40.0% |
| ! | GTTGCAGACTTTTAATGCGA+GGG | + | chr7_4:63532113-63532132 | Msa1170350:CDS | 40.0% |
| GCATAAGATCAAAGACTTGG+AGG | + | chr7_4:63532248-63532267 | Msa1170350:intron | 40.0% | |
| AAAAAAACCTCCTAAGGGCA+TGG | - | chr7_4:63532293-63532312 | None:intergenic | 40.0% | |
| !!! | TGCTATAGTCTAGCGGATTT+TGG | + | chr7_4:63532372-63532391 | Msa1170350:intron | 40.0% |
| ! | TGTGCTTCTAGGTTGAAGAT+TGG | + | chr7_4:63532657-63532676 | Msa1170350:intron | 40.0% |
| TCAGTATGTGTTGAATCCCA+AGG | + | chr7_4:63532689-63532708 | Msa1170350:CDS | 40.0% | |
| CAGTATGTGTTGAATCCCAA+GGG | + | chr7_4:63532690-63532709 | Msa1170350:CDS | 40.0% | |
| TCAAAACCCATGATTTCAGC+AGG | - | chr7_4:63532723-63532742 | None:intergenic | 40.0% | |
| TCTCTTGATGTCATCAGCAT+AGG | - | chr7_4:63532778-63532797 | None:intergenic | 40.0% | |
| !! | TTTCAGCGGACTTTTTCTGA+AGG | - | chr7_4:63532833-63532852 | None:intergenic | 40.0% |
| TGTGCTTGTGCTTTACATGA+AGG | + | chr7_4:63532967-63532986 | Msa1170350:intron | 40.0% | |
| ATGTACTGAGAGAGTGAGTT+TGG | + | chr7_4:63533032-63533051 | Msa1170350:intron | 40.0% | |
| TTCCACATTCTAATTCCTGC+AGG | - | chr7_4:63533105-63533124 | None:intergenic | 40.0% | |
| GTTGTTGTACTACTGTCTAC+TGG | + | chr7_4:63533180-63533199 | Msa1170350:intron | 40.0% | |
| TTGTCAGAAAAGGGAAGAGT+GGG | - | chr7_4:63533456-63533475 | None:intergenic | 40.0% | |
| ATTGTCAGAAAAGGGAAGAG+TGG | - | chr7_4:63533457-63533476 | None:intergenic | 40.0% | |
| CACTCTTTGTTGGAGTTAGA+AGG | + | chr7_4:63533487-63533506 | Msa1170350:intron | 40.0% | |
| TCACTAGCTGGAAACTCAAA+TGG | + | chr7_4:63533586-63533605 | Msa1170350:intron | 40.0% | |
| TGATCATGATGTGGGCATTA+TGG | + | chr7_4:63533691-63533710 | Msa1170350:CDS | 40.0% | |
| TTGAACCAAATTGGGGGAAA+AGG | + | chr7_4:63533789-63533808 | Msa1170350:intron | 40.0% | |
| TTGTGTTTCGATGAACTTGG+AGG | + | chr7_4:63533871-63533890 | Msa1170350:intron | 40.0% | |
| TGTGTTTCGATGAACTTGGA+GGG | + | chr7_4:63533872-63533891 | Msa1170350:intron | 40.0% | |
| ACGAAATTGGCCAATCAATG+TGG | - | chr7_4:63533916-63533935 | None:intergenic | 40.0% | |
| !! | CTGGGAGTGTTGAAGAAAAA+AGG | + | chr7_4:63534151-63534170 | Msa1170350:intron | 40.0% |
| GAGCAAAATATGGAGCTGAA+TGG | - | chr7_4:63534914-63534933 | None:intergenic | 40.0% | |
| !! | GGAAGGTAGGAAGTGTCTTT+GGG | - | chr7_4:63531250-63531269 | None:intergenic | 45.0% |
| !! | TGGAAGGTAGGAAGTGTCTT+TGG | - | chr7_4:63531251-63531270 | None:intergenic | 45.0% |
| ! | TGCGATTGCGGATTGTTGAT+AGG | - | chr7_4:63531374-63531393 | None:intergenic | 45.0% |
| ATTTGTTTAGCGGAAGGGGA+AGG | - | chr7_4:63531451-63531470 | None:intergenic | 45.0% | |
| ! | GTGGATTTGTTTAGCGGAAG+GGG | - | chr7_4:63531455-63531474 | None:intergenic | 45.0% |
| ! | CGTGGATTTGTTTAGCGGAA+GGG | - | chr7_4:63531456-63531475 | None:intergenic | 45.0% |
| ! | TCGTGGATTTGTTTAGCGGA+AGG | - | chr7_4:63531457-63531476 | None:intergenic | 45.0% |
| ! | GGAGTTCGGTGAGGAAAATT+AGG | - | chr7_4:63531483-63531502 | None:intergenic | 45.0% |
| ! | GAAATTCAAGGAGTTCGGTG+AGG | - | chr7_4:63531492-63531511 | None:intergenic | 45.0% |
| ! | AGCATTGAAGGCCATTGATG+CGG | - | chr7_4:63531610-63531629 | None:intergenic | 45.0% |
| TCGACGAATTCGAGAGAGAT+AGG | - | chr7_4:63531672-63531691 | None:intergenic | 45.0% | |
| CGAGGCTATTCTTGATATGG+AGG | + | chr7_4:63531774-63531793 | Msa1170350:CDS | 45.0% | |
| TCATGAGAAGTCTGTTGCTG+AGG | + | chr7_4:63531819-63531838 | Msa1170350:CDS | 45.0% | |
| !! | GCAAACTGTTGTTGAGTTGG+AGG | + | chr7_4:63531861-63531880 | Msa1170350:CDS | 45.0% |
| GGATGAGCTTGAGAAAGAGA+AGG | + | chr7_4:63531921-63531940 | Msa1170350:CDS | 45.0% | |
| TGAGAAAGAGAAGGCTGTGT+TGG | + | chr7_4:63531930-63531949 | Msa1170350:CDS | 45.0% | |
| AAAGAGAAGGCTGTGTTGGA+AGG | + | chr7_4:63531934-63531953 | Msa1170350:CDS | 45.0% | |
| GGAGAATGAGAGGATTGTTG+AGG | + | chr7_4:63532062-63532081 | Msa1170350:CDS | 45.0% | |
| GAGGATTGTTGAGGAGAATG+AGG | + | chr7_4:63532071-63532090 | Msa1170350:CDS | 45.0% | |
| TGAGGAGCTTAAGACGAAAG+TGG | + | chr7_4:63532089-63532108 | Msa1170350:CDS | 45.0% | |
| ! | GACTTTTAATGCGAGGGATG+TGG | + | chr7_4:63532119-63532138 | Msa1170350:CDS | 45.0% |
| !! | GGAACTTGCTAGGAATGCTT+GGG | + | chr7_4:63532191-63532210 | Msa1170350:CDS | 45.0% |
| ! | ATGCTTGGGAGGAAAAGTGT+TGG | + | chr7_4:63532205-63532224 | Msa1170350:intron | 45.0% |
| !! | TGCTTGGGAGGAAAAGTGTT+GGG | + | chr7_4:63532206-63532225 | Msa1170350:intron | 45.0% |
| CGCGCATAAGATCAAAGACT+TGG | + | chr7_4:63532245-63532264 | Msa1170350:intron | 45.0% | |
| ! | AAGGGCATGGTTGCAATCTA+TGG | - | chr7_4:63532280-63532299 | None:intergenic | 45.0% |
| TAGATTGCAACCATGCCCTT+AGG | + | chr7_4:63532280-63532299 | Msa1170350:intron | 45.0% | |
| CTAGTCAAGTGTGCACTGTT+TGG | + | chr7_4:63532550-63532569 | Msa1170350:intron | 45.0% | |
| TCAGCATAGGATTCAAGCAC+AGG | - | chr7_4:63532765-63532784 | None:intergenic | 45.0% | |
| TGACATCAAGAGAAGTTCGG+TGG | + | chr7_4:63532785-63532804 | Msa1170350:CDS | 45.0% | |
| ! | GAGAAGTTCGGTGGTGAAAT+TGG | + | chr7_4:63532794-63532813 | Msa1170350:CDS | 45.0% |
| GGTGGTGAAATTGGAAGAGT+TGG | + | chr7_4:63532803-63532822 | Msa1170350:CDS | 45.0% | |
| ! | AAGCCTAGCAGCATTTTCAG+CGG | - | chr7_4:63532847-63532866 | None:intergenic | 45.0% |
| TTGATTGTGTGTGGACAGTG+TGG | + | chr7_4:63533062-63533081 | Msa1170350:intron | 45.0% | |
| TAGAATGTGGAAGCTGATGC+AGG | + | chr7_4:63533113-63533132 | Msa1170350:intron | 45.0% | |
| AGAATGTGGAAGCTGATGCA+GGG | + | chr7_4:63533114-63533133 | Msa1170350:intron | 45.0% | |
| TGCCGAAGCTAAGAAGATGT+CGG | + | chr7_4:63533652-63533671 | Msa1170350:CDS | 45.0% | |
| GTCCGACATCTTCTTAGCTT+CGG | - | chr7_4:63533657-63533676 | None:intergenic | 45.0% | |
| CAGCTAGCTGATCATGATGT+GGG | + | chr7_4:63533683-63533702 | Msa1170350:CDS | 45.0% | |
| TGTGGGCATTATGGAAAGAG+AGG | + | chr7_4:63533700-63533719 | Msa1170350:CDS | 45.0% | |
| !! | AGAGGCAGCTGAGGTTTTAA+AGG | + | chr7_4:63533718-63533737 | Msa1170350:CDS | 45.0% |
| TGGGTAGCAACTAGCATCTT+AGG | - | chr7_4:63533963-63533982 | None:intergenic | 45.0% | |
| GGCATCTGAATTGAAGTTGC+AGG | + | chr7_4:63534412-63534431 | Msa1170350:intron | 45.0% | |
| ! | GATTGAAGGCACAATACTGG+AGG | + | chr7_4:63535016-63535035 | Msa1170350:intron | 45.0% |
| !! | AAGTGTCTTTGGGTTGGCGA+CGG | - | chr7_4:63531240-63531259 | None:intergenic | 50.0% |
| !! | GGTAGGAAGTGTCTTTGGGT+TGG | - | chr7_4:63531246-63531265 | None:intergenic | 50.0% |
| !! | GGAGTTGATGGTTGCGATTG+CGG | - | chr7_4:63531386-63531405 | None:intergenic | 50.0% |
| GAAATTGTGAGAGGCGAGGA+AGG | - | chr7_4:63531407-63531426 | None:intergenic | 50.0% | |
| TGTGGAAATTGTGAGAGGCG+AGG | - | chr7_4:63531411-63531430 | None:intergenic | 50.0% | |
| CATTGAAGGCCATTGATGCG+GGG | - | chr7_4:63531608-63531627 | None:intergenic | 50.0% | |
| GCATTGAAGGCCATTGATGC+GGG | - | chr7_4:63531609-63531628 | None:intergenic | 50.0% | |
| GTCTGTTGCTGAGGAGAAAC+TGG | + | chr7_4:63531828-63531847 | Msa1170350:CDS | 50.0% | |
| !! | TGTTGAGTTGGAGGCGCAAT+TGG | + | chr7_4:63531870-63531889 | Msa1170350:CDS | 50.0% |
| AAGGATTGAGCCGTTGGAGA+GGG | + | chr7_4:63531999-63532018 | Msa1170350:CDS | 50.0% | |
| GGAGAAGGAGAAGCAATTGG+AGG | + | chr7_4:63532029-63532048 | Msa1170350:CDS | 50.0% | |
| TTAATGCGAGGGATGTGGAG+AGG | + | chr7_4:63532124-63532143 | Msa1170350:CDS | 50.0% | |
| GGATGTGGAGAGGATGAAGA+AGG | + | chr7_4:63532134-63532153 | Msa1170350:CDS | 50.0% | |
| !! | CGGAACTTGCTAGGAATGCT+TGG | + | chr7_4:63532190-63532209 | Msa1170350:CDS | 50.0% |
| ! | ACTTGCTAGGAATGCTTGGG+AGG | + | chr7_4:63532194-63532213 | Msa1170350:CDS | 50.0% |
| ATTGCAACCATGCCCTTAGG+AGG | + | chr7_4:63532283-63532302 | Msa1170350:intron | 50.0% | |
| AACCACGCCTGCTGAAATCA+TGG | + | chr7_4:63532713-63532732 | Msa1170350:CDS | 50.0% | |
| ACCACGCCTGCTGAAATCAT+GGG | + | chr7_4:63532714-63532733 | Msa1170350:CDS | 50.0% | |
| AGTCCGCTGAAAATGCTGCT+AGG | + | chr7_4:63532841-63532860 | Msa1170350:CDS | 50.0% | |
| TGGACAGTGTGGTATCAGAG+TGG | + | chr7_4:63533073-63533092 | Msa1170350:intron | 50.0% | |
| GGCCTGCAGGAATTAGAATG+TGG | + | chr7_4:63533100-63533119 | Msa1170350:intron | 50.0% | |
| GAATGTGGAAGCTGATGCAG+GGG | + | chr7_4:63533115-63533134 | Msa1170350:intron | 50.0% | |
| GGAGTCAGAGGACAAGTACA+AGG | - | chr7_4:63533245-63533264 | None:intergenic | 50.0% | |
| CCACATCATGATCAGCTAGC+TGG | - | chr7_4:63533685-63533704 | None:intergenic | 50.0% | |
| CCAGCTAGCTGATCATGATG+TGG | + | chr7_4:63533682-63533701 | Msa1170350:CDS | 50.0% | |
| TATGGAAAGAGAGGCAGCTG+AGG | + | chr7_4:63533709-63533728 | Msa1170350:CDS | 50.0% | |
| ! | CAACGCCTTTTCCCCCAATT+TGG | - | chr7_4:63533797-63533816 | None:intergenic | 50.0% |
| ! | CAAATTGGGGGAAAAGGCGT+TGG | + | chr7_4:63533795-63533814 | Msa1170350:intron | 50.0% |
| CGAGACTGATGTCGGAATCG+CGG | - | chr7_4:63531294-63531313 | None:intergenic | 55.0% | |
| GCTGCTGACGAGACTGATGT+CGG | - | chr7_4:63531302-63531321 | None:intergenic | 55.0% | |
| GTCGAATGAGGGGATTCCGA+CGG | - | chr7_4:63531335-63531354 | None:intergenic | 55.0% | |
| AGAGGCGAGGAAGGAGTTGA+TGG | - | chr7_4:63531398-63531417 | None:intergenic | 55.0% | |
| ! | TGAGTTGGAGGCGCAATTGG+AGG | + | chr7_4:63531873-63531892 | Msa1170350:CDS | 55.0% |
| CTCATCCTTCTTAGACGGCG+CGG | - | chr7_4:63531908-63531927 | None:intergenic | 55.0% | |
| TGGGTCAAGGATTGAGCCGT+TGG | + | chr7_4:63531993-63532012 | Msa1170350:CDS | 55.0% | |
| CAAGGATTGAGCCGTTGGAG+AGG | + | chr7_4:63531998-63532017 | Msa1170350:CDS | 55.0% | |
| ! | TGAGCCGTTGGAGAGGGTTT+TGG | + | chr7_4:63532005-63532024 | Msa1170350:CDS | 55.0% |
| TCCGCCAAAACCCTCTCCAA+CGG | - | chr7_4:63532012-63532031 | None:intergenic | 55.0% | |
| GGCGGAGAAGGAGAAGCAAT+TGG | + | chr7_4:63532026-63532045 | Msa1170350:CDS | 55.0% | |
| GGAGAAGCAATTGGAGGCGA+AGG | + | chr7_4:63532035-63532054 | Msa1170350:CDS | 55.0% | |
| GAAGCAATTGGAGGCGAAGG+TGG | + | chr7_4:63532038-63532057 | Msa1170350:CDS | 55.0% | |
| !! | CGAAGGTGGTGGAGAATGAG+AGG | + | chr7_4:63532052-63532071 | Msa1170350:CDS | 55.0% |
| AGGAGTTGCACGCTGTTGAG+AGG | + | chr7_4:63532154-63532173 | Msa1170350:CDS | 55.0% | |
| GGAGTTGCACGCTGTTGAGA+GGG | + | chr7_4:63532155-63532174 | Msa1170350:CDS | 55.0% | |
| TGTTGAGAGGGATGCTGGTG+AGG | + | chr7_4:63532167-63532186 | Msa1170350:CDS | 55.0% | |
| ACCCATGATTTCAGCAGGCG+TGG | - | chr7_4:63532718-63532737 | None:intergenic | 55.0% | |
| GTGTGGTATCAGAGTGGTGC+TGG | + | chr7_4:63533079-63533098 | Msa1170350:intron | 55.0% | |
| ACATTGTCGCGTGGAGTCAG+AGG | - | chr7_4:63533257-63533276 | None:intergenic | 55.0% | |
| !! | GTCTTTGGGTTGGCGACGGT+GGG | - | chr7_4:63531236-63531255 | None:intergenic | 60.0% |
| !! | TGTCTTTGGGTTGGCGACGG+TGG | - | chr7_4:63531237-63531256 | None:intergenic | 60.0% |
| !! | AGGGGTTGGTGGTGGAAGGT+AGG | - | chr7_4:63531263-63531282 | None:intergenic | 60.0% |
| !! | TGAGAGGGGTTGGTGGTGGA+AGG | - | chr7_4:63531267-63531286 | None:intergenic | 60.0% |
| !! | TGGTTGAGAGGGGTTGGTGG+TGG | - | chr7_4:63531271-63531290 | None:intergenic | 60.0% |
| GGAATCGCGGTGGTTGAGAG+GGG | - | chr7_4:63531281-63531300 | None:intergenic | 60.0% | |
| CGGAATCGCGGTGGTTGAGA+GGG | - | chr7_4:63531282-63531301 | None:intergenic | 60.0% | |
| TCGGAATCGCGGTGGTTGAG+AGG | - | chr7_4:63531283-63531302 | None:intergenic | 60.0% | |
| GACTGATGTCGGAATCGCGG+TGG | - | chr7_4:63531291-63531310 | None:intergenic | 60.0% | |
| AGGGGATTCCGACGGAGGAA+GGG | - | chr7_4:63531327-63531346 | None:intergenic | 60.0% | |
| GAATGAGGGGATTCCGACGG+AGG | - | chr7_4:63531332-63531351 | None:intergenic | 60.0% | |
| ACCCTGCTACCCCGCATCAA+TGG | + | chr7_4:63531596-63531615 | Msa1170350:CDS | 60.0% | |
| GCCATTGATGCGGGGTAGCA+GGG | - | chr7_4:63531600-63531619 | None:intergenic | 60.0% | |
| ! | GTTGGAGGCGCAATTGGAGG+AGG | + | chr7_4:63531876-63531895 | Msa1170350:CDS | 60.0% |
| GAGATCCGCGCCGTCTAAGA+AGG | + | chr7_4:63531900-63531919 | Msa1170350:CDS | 60.0% | |
| !! | GCCGTTGGAGAGGGTTTTGG+CGG | + | chr7_4:63532008-63532027 | Msa1170350:CDS | 60.0% |
| !! | GGAGAGGGTTTTGGCGGAGA+AGG | + | chr7_4:63532014-63532033 | Msa1170350:CDS | 60.0% |
| GCAATTGGAGGCGAAGGTGG+TGG | + | chr7_4:63532041-63532060 | Msa1170350:CDS | 60.0% | |
| CACGCTGTTGAGAGGGATGC+TGG | + | chr7_4:63532162-63532181 | Msa1170350:CDS | 60.0% | |
| TGAGAGGGATGCTGGTGAGG+CGG | + | chr7_4:63532170-63532189 | Msa1170350:CDS | 60.0% | |
| ! | CTGGTGAGGCGGAACTTGCT+AGG | + | chr7_4:63532181-63532200 | Msa1170350:CDS | 60.0% |
| TCAGCAGGCGTGGTTCCCTT+GGG | - | chr7_4:63532708-63532727 | None:intergenic | 60.0% | |
| TTCAGCAGGCGTGGTTCCCT+TGG | - | chr7_4:63532709-63532728 | None:intergenic | 60.0% | |
| !! | TTTGGGTTGGCGACGGTGGG+TGG | - | chr7_4:63531233-63531252 | None:intergenic | 65.0% |
| CGGTGGTTGAGAGGGGTTGG+TGG | - | chr7_4:63531274-63531293 | None:intergenic | 65.0% | |
| TCGCGGTGGTTGAGAGGGGT+TGG | - | chr7_4:63531277-63531296 | None:intergenic | 65.0% | |
| GGATTCCGACGGAGGAAGGG+CGG | - | chr7_4:63531324-63531343 | None:intergenic | 65.0% | |
| GAGGGGATTCCGACGGAGGA+AGG | - | chr7_4:63531328-63531347 | None:intergenic | 65.0% | |
| GGCCATTGATGCGGGGTAGC+AGG | - | chr7_4:63531601-63531620 | None:intergenic | 65.0% | |
| !! | TCAGAGTGGTGCTGGCCTGC+AGG | + | chr7_4:63533087-63533106 | Msa1170350:intron | 65.0% |
| AGCAGCCGCCCTTCCTCCGT+CGG | + | chr7_4:63531316-63531335 | Msa1170350:CDS | 70.0% | |
| ! | TGGCGACGGTGGGTGGCGGT+GGG | - | chr7_4:63531226-63531245 | None:intergenic | 75.0% |
| ! | TTGGCGACGGTGGGTGGCGG+TGG | - | chr7_4:63531227-63531246 | None:intergenic | 75.0% |
| ! | GGGTTGGCGACGGTGGGTGG+CGG | - | chr7_4:63531230-63531249 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 63531214 | 63535219 | 63531214 | ID=Msa1170350;Name=Msa1170350 |
| chr7_4 | mRNA | 63531214 | 63535219 | 63531214 | ID=Msa1170350-mRNA-1;Parent=Msa1170350;Name=Msa1170350-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0.75|0.8|1|0.75|0.6|5|440|549 |
| chr7_4 | exon | 63531214 | 63532220 | 63531214 | ID=Msa1170350-mRNA-1:exon:20310;Parent=Msa1170350-mRNA-1 |
| chr7_4 | exon | 63532668 | 63532914 | 63532668 | ID=Msa1170350-mRNA-1:exon:20311;Parent=Msa1170350-mRNA-1 |
| chr7_4 | exon | 63533593 | 63533739 | 63533593 | ID=Msa1170350-mRNA-1:exon:20312;Parent=Msa1170350-mRNA-1 |
| chr7_4 | exon | 63534413 | 63535032 | 63534413 | ID=Msa1170350-mRNA-1:exon:20313;Parent=Msa1170350-mRNA-1 |
| chr7_4 | exon | 63535151 | 63535219 | 63535151 | ID=Msa1170350-mRNA-1:exon:20314;Parent=Msa1170350-mRNA-1 |
| chr7_4 | CDS | 63531214 | 63532220 | 63531214 | ID=Msa1170350-mRNA-1:cds;Parent=Msa1170350-mRNA-1 |
| chr7_4 | CDS | 63532668 | 63532914 | 63532668 | ID=Msa1170350-mRNA-1:cds;Parent=Msa1170350-mRNA-1 |
| chr7_4 | CDS | 63533593 | 63533739 | 63533593 | ID=Msa1170350-mRNA-1:cds;Parent=Msa1170350-mRNA-1 |
| chr7_4 | CDS | 63534413 | 63534661 | 63534413 | ID=Msa1170350-mRNA-1:cds;Parent=Msa1170350-mRNA-1 |
| chr7_4 | three_prime_UTR | 63534662 | 63535032 | 63534662 | ID=Msa1170350-mRNA-1:three_prime_utr;Parent=Msa1170350-mRNA-1 |
| chr7_4 | three_prime_UTR | 63535151 | 63535219 | 63535151 | ID=Msa1170350-mRNA-1:three_prime_utr;Parent=Msa1170350-mRNA-1 |
| Gene Sequence |
| Protein sequence |
