Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0278370 | XP_003594432.1 | 95.667 | 577 | 23 | 1 | 1 | 577 | 1 | 575 | 0.0 | 1105 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0278370 | sp|Q9M1G5|NDC80_ARATH | 45.725 | 538 | 282 | 5 | 24 | 559 | 33 | 562 | 2.63e-163 | 480 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0278370 | G7IFT2 | 95.667 | 577 | 23 | 1 | 1 | 577 | 1 | 575 | 0.0 | 1105 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0048510 | Msa0278370 | 0.802633 | 5.113084e-49 | -8.615850e-47 |
| Msa0094780 | Msa0278370 | 0.811144 | 8.108994e-51 | -8.615850e-47 |
| Msa0198130 | Msa0278370 | 0.940370 | 2.621889e-100 | -8.615850e-47 |
| Msa0198230 | Msa0278370 | 0.933580 | 1.510966e-95 | -8.615850e-47 |
| Msa0225860 | Msa0278370 | 0.802096 | 6.598305e-49 | -8.615850e-47 |
| Msa0237210 | Msa0278370 | 0.807657 | 4.541567e-50 | -8.615850e-47 |
| Msa0260510 | Msa0278370 | 0.808016 | 3.809513e-50 | -8.615850e-47 |
| Msa0278330 | Msa0278370 | 0.964886 | 6.778071e-124 | -8.615850e-47 |
| Msa0278350 | Msa0278370 | 0.951303 | 2.713423e-109 | -8.615850e-47 |
| Msa0278370 | Msa0278450 | 0.965092 | 3.701616e-124 | -8.615850e-47 |
| Msa0278370 | Msa0328080 | 0.866028 | 3.846357e-65 | -8.615850e-47 |
| Msa0278370 | Msa0328150 | 0.977551 | 5.227439e-144 | -8.615850e-47 |
| Msa0278370 | Msa0361910 | 0.806768 | 7.005860e-50 | -8.615850e-47 |
| Msa0278370 | Msa0483100 | 0.849635 | 2.849282e-60 | -8.615850e-47 |
| Msa0278370 | Msa0534720 | 0.842506 | 2.480386e-58 | -8.615850e-47 |
| Msa0278370 | Msa1027990 | 0.800599 | 1.336331e-48 | -8.615850e-47 |
| Msa0278370 | Msa1155900 | 0.802578 | 5.250402e-49 | -8.615850e-47 |
| Msa0278370 | Msa1170350 | 0.924789 | 4.402412e-90 | -8.615850e-47 |
| Msa0278370 | Msa1192570 | 0.804792 | 1.822107e-49 | -8.615850e-47 |
| Msa0278370 | Msa1320670 | 0.853207 | 2.783089e-61 | -8.615850e-47 |
| Msa0278370 | Msa1345810 | 0.802588 | 5.225194e-49 | -8.615850e-47 |
| Msa0278370 | Msa1392580 | 0.818302 | 2.104052e-52 | -8.615850e-47 |
| Msa0278370 | Msa1397400 | 0.811950 | 5.416311e-51 | -8.615850e-47 |
| Msa0278370 | Msa1420950 | 0.800497 | 1.401602e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0278370 | MtrunA17_Chr2g0291491 | 95.667 | 577 | 23 | 1 | 1 | 577 | 1 | 575 | 0.0 | 1105 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0278370 | AT3G54630.1 | 45.725 | 538 | 282 | 5 | 24 | 559 | 33 | 562 | 2.68e-164 | 480 |
Find 165 sgRNAs with CRISPR-Local
Find 396 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATAACAATAATATTCTATT+TGG | 0.158248 | 2_3:-11379991 | Msa0278370:CDS |
| ATTGATTTATTAAGTTTAAA+AGG | 0.160827 | 2_3:+11380135 | None:intergenic |
| CTATGTTATGTATACAAAAT+AGG | 0.178307 | 2_3:-11374925 | None:intergenic |
| GGAGTTCGGTGAGGAAAATT+AGG | 0.203771 | 2_3:+11380220 | None:intergenic |
| TGGAAGGTAGGAAGTGTCTT+TGG | 0.259688 | 2_3:+11380452 | None:intergenic |
| CATAAGATAATTGAGGAGTT+TGG | 0.260608 | 2_3:-11379727 | Msa0278370:CDS |
| TTGGCGACGGTGGGTGGCGG+TGG | 0.276135 | 2_3:+11380476 | None:intergenic |
| GAGAAGTTCGGTGGTGAAAT+TGG | 0.292249 | 2_3:-11378906 | Msa0278370:CDS |
| TGAGCCGTTGGAGAGGGTTT+TGG | 0.311584 | 2_3:-11379695 | Msa0278370:CDS |
| AAGGGCCTGGTTGCAATCTA+TGG | 0.332441 | 2_3:+11379423 | None:intergenic |
| ATAAGATAATTGAGGAGTTT+GGG | 0.338703 | 2_3:-11379726 | Msa0278370:CDS |
| TTCAGCAGGCGTGGTTCCCT+TGG | 0.339122 | 2_3:+11378994 | None:intergenic |
| ATGAATACAAGAGCAAAATA+TGG | 0.344269 | 2_3:+11375083 | None:intergenic |
| GGAAGGTAGGAAGTGTCTTT+GGG | 0.347036 | 2_3:+11380453 | None:intergenic |
| GGCCATTGATGCGGGGTAGC+AGG | 0.360117 | 2_3:+11380102 | None:intergenic |
| CAATGCTTTGTCTTATTCAC+TGG | 0.360486 | 2_3:-11380077 | Msa0278370:CDS |
| TGATCATGATGTGGGCATTA+TGG | 0.365375 | 2_3:-11376345 | Msa0278370:CDS |
| GTCTGTTGCTGAGGAGAAAC+TGG | 0.366375 | 2_3:-11379872 | Msa0278370:CDS |
| TATGTTATGTATACAAAATA+GGG | 0.372003 | 2_3:-11374924 | None:intergenic |
| TGACGAGGCTATTCTTGATA+TGG | 0.379772 | 2_3:-11379929 | Msa0278370:CDS |
| GTCTTTGGGTTGGCGACGGT+GGG | 0.391931 | 2_3:+11380467 | None:intergenic |
| GAGTTCGGTGAGGAAAATTA+GGG | 0.399786 | 2_3:+11380221 | None:intergenic |
| TGGTTGAGAGGGGTTGGTGG+TGG | 0.400749 | 2_3:+11380432 | None:intergenic |
| GTCCGACATCTTCTTAGCTT+CGG | 0.401875 | 2_3:+11376382 | None:intergenic |
| GCATCTTTACATCAAATTGA+TGG | 0.403182 | 2_3:+11375054 | None:intergenic |
| GGCATCTGAATTGAAGTTGC+AGG | 0.406818 | 2_3:-11375623 | Msa0278370:CDS |
| TTGAAGAGTTTGAGAAGTAA+AGG | 0.409288 | 2_3:+11380162 | None:intergenic |
| GGGTTGGCGACGGTGGGTGG+CGG | 0.420965 | 2_3:+11380473 | None:intergenic |
| TGAATAAGACAAAGCATTGA+AGG | 0.425794 | 2_3:+11380081 | None:intergenic |
| TGTTGAGTTGGAGGCGCAAT+TGG | 0.435358 | 2_3:-11379830 | Msa0278370:CDS |
| TCACTAGCTGGAAACTCAAA+TGG | 0.437352 | 2_3:-11376450 | Msa0278370:intron |
| CGGAACTTGCTAGGAATGCT+TGG | 0.439222 | 2_3:-11379510 | Msa0278370:CDS |
| AGGGGTTGGTGGTGGAAGGT+AGG | 0.444653 | 2_3:+11380440 | None:intergenic |
| TGAGAAAGAGAAGGGTGTGT+TGG | 0.446077 | 2_3:-11379770 | Msa0278370:CDS |
| TTGATTTATTAAGTTTAAAA+GGG | 0.447323 | 2_3:+11380136 | None:intergenic |
| TGCGATTGCGGATTGTTGAT+AGG | 0.448386 | 2_3:+11380329 | None:intergenic |
| GAAATTGTGAGAGGCGAGGA+AGG | 0.448991 | 2_3:+11380296 | None:intergenic |
| AACCACGCCTGCTGAAATCA+TGG | 0.451028 | 2_3:-11378987 | Msa0278370:CDS |
| TAGATTGCAACCAGGCCCTT+AGG | 0.451842 | 2_3:-11379420 | Msa0278370:CDS |
| TACGTGCATCATTAGATTGA+AGG | 0.458764 | 2_3:-11375002 | Msa0278370:three_prime_UTR |
| TGAGAGGGGTTGGTGGTGGA+AGG | 0.460898 | 2_3:+11380436 | None:intergenic |
| GAATGTGGTTAATTGAAAGT+AGG | 0.462877 | 2_3:-11375177 | Msa0278370:three_prime_UTR |
| GAATGTGGTTAATTGAAAGT+AGG | 0.462877 | 2_3:-11375299 | Msa0278370:three_prime_UTR |
| TGTGCTTCTAGGTTGAAGAT+TGG | 0.463038 | 2_3:-11379043 | Msa0278370:intron |
| GGCGGAGAAGGAGAAGCAAT+TGG | 0.464127 | 2_3:-11379674 | Msa0278370:CDS |
| TCAGCAGGCGTGGTTCCCTT+GGG | 0.464966 | 2_3:+11378995 | None:intergenic |
| AACGGGAAATTCAAGGAGTT+CGG | 0.466119 | 2_3:+11380206 | None:intergenic |
| AGAGGCAGCTGAGGTTCTAA+AGG | 0.469279 | 2_3:-11376318 | Msa0278370:intron |
| ACCCTGCTACCCCGCATCAA+TGG | 0.472909 | 2_3:-11380104 | Msa0278370:CDS |
| CGCGCATAAGATCAAAGACT+TGG | 0.473475 | 2_3:-11379455 | Msa0278370:CDS |
| TGTCTTTGGGTTGGCGACGG+TGG | 0.473790 | 2_3:+11380466 | None:intergenic |
| AGAGGCGAGGAAGGAGTTGA+TGG | 0.475835 | 2_3:+11380305 | None:intergenic |
| GAGGGGATTCCGACGGAGGA+AGG | 0.476947 | 2_3:+11380375 | None:intergenic |
| TGAGGAAAATTAGGGTTTCG+TGG | 0.477520 | 2_3:+11380229 | None:intergenic |
| TCGCGGTGGTTGAGAGGGGT+TGG | 0.479818 | 2_3:+11380426 | None:intergenic |
| TCGACGAATTCGAGAGAGAT+AGG | 0.483008 | 2_3:+11380031 | None:intergenic |
| TGCTTGGGAGGAAAAGTGTT+GGG | 0.483018 | 2_3:-11379494 | Msa0278370:CDS |
| GCATTGAAGGCCATTGATGC+GGG | 0.484798 | 2_3:+11380094 | None:intergenic |
| TGGCGACGGTGGGTGGCGGT+GGG | 0.488231 | 2_3:+11380477 | None:intergenic |
| GGTGGTGAAATTGGAAGAGT+TGG | 0.490182 | 2_3:-11378897 | Msa0278370:CDS |
| CGGAATCGCGGTGGTTGAGA+GGG | 0.491653 | 2_3:+11380421 | None:intergenic |
| CGGTGGTTGAGAGGGGTTGG+TGG | 0.491912 | 2_3:+11380429 | None:intergenic |
| TTTGGGTTGGCGACGGTGGG+TGG | 0.492725 | 2_3:+11380470 | None:intergenic |
| TTGTTGTTGTTGAATGCAAC+GGG | 0.498103 | 2_3:+11380573 | None:intergenic |
| GGATGTGGAGAGGATGAAGA+AGG | 0.500189 | 2_3:-11379566 | Msa0278370:CDS |
| TGGGTCAAGGATTGAGCCGT+TGG | 0.504005 | 2_3:-11379707 | Msa0278370:CDS |
| TCGTGGATTTGTTTAGCGGA+AGG | 0.505891 | 2_3:+11380246 | None:intergenic |
| GGAGAAGCAATTGGAGGCGA+AGG | 0.507967 | 2_3:-11379665 | Msa0278370:CDS |
| GCAATTGGAGGCGAAGGTGG+TGG | 0.508621 | 2_3:-11379659 | Msa0278370:CDS |
| GCAAACTGTTGTTGAGTTGG+AGG | 0.509033 | 2_3:-11379839 | Msa0278370:CDS |
| GAGATCCGCGCCGTCTAAGA+AGG | 0.509647 | 2_3:-11379800 | Msa0278370:CDS |
| TCAAGCTCATCCTTCTTAGA+CGG | 0.509935 | 2_3:+11379790 | None:intergenic |
| CTGGTGAGGCGGAACTTGCT+AGG | 0.511152 | 2_3:-11379519 | Msa0278370:CDS |
| GAGGATTGTTGAGGAGAATG+AGG | 0.511952 | 2_3:-11379629 | Msa0278370:CDS |
| CACGCTGTTGAGAGGGATGC+TGG | 0.512009 | 2_3:-11379538 | Msa0278370:CDS |
| AGCAGCCGCCCTTCCTCCGT+CGG | 0.512411 | 2_3:-11380384 | Msa0278370:CDS |
| GTCTTTGTAAAGGTCGAATG+AGG | 0.513877 | 2_3:+11380356 | None:intergenic |
| CGAAGGTGGTGGAGAATGAG+AGG | 0.518233 | 2_3:-11379648 | Msa0278370:CDS |
| AGGGGATTCCGACGGAGGAA+GGG | 0.518465 | 2_3:+11380376 | None:intergenic |
| CTTGTTGTTGTTGAATGCAA+CGG | 0.520747 | 2_3:+11380572 | None:intergenic |
| TGAGTTGGAGGCGCAATTGG+AGG | 0.523011 | 2_3:-11379827 | Msa0278370:CDS |
| GATAGGAACGGTCTTTGTAA+AGG | 0.523078 | 2_3:+11380346 | None:intergenic |
| TGAGCAAACTGTTGTTGAGT+TGG | 0.525689 | 2_3:-11379842 | Msa0278370:CDS |
| AAAATATAGTTATATATTGG+AGG | 0.526340 | 2_3:-11375425 | Msa0278370:CDS |
| TCAGCATAGGATTCAAGCAC+AGG | 0.527543 | 2_3:+11378938 | None:intergenic |
| GGAACTTGCTAGGAATGCTT+GGG | 0.527690 | 2_3:-11379509 | Msa0278370:CDS |
| CTCAAAGTATAAAGAACATG+TGG | 0.527765 | 2_3:-11375530 | Msa0278370:CDS |
| GCCATTGATGCGGGGTAGCA+GGG | 0.530312 | 2_3:+11380103 | None:intergenic |
| GTGGATTTGTTTAGCGGAAG+GGG | 0.530909 | 2_3:+11380248 | None:intergenic |
| GGATGAGCTTGAGAAAGAGA+AGG | 0.531000 | 2_3:-11379779 | Msa0278370:CDS |
| AAGTGTCTTTGGGTTGGCGA+CGG | 0.533107 | 2_3:+11380463 | None:intergenic |
| CCACATCATGATCAGCTAGC+TGG | 0.533202 | 2_3:+11376354 | None:intergenic |
| CGTGGATTTGTTTAGCGGAA+GGG | 0.535425 | 2_3:+11380247 | None:intergenic |
| GGTTTCGTGGATTTGTTTAG+CGG | 0.537126 | 2_3:+11380242 | None:intergenic |
| TCTCTTGATGTCATCAGCAT+AGG | 0.537512 | 2_3:+11378925 | None:intergenic |
| GATGAGCTTGAGAAAGAGAA+GGG | 0.537514 | 2_3:-11379778 | Msa0278370:CDS |
| TCAAAACCCATGATTTCAGC+AGG | 0.541601 | 2_3:+11378980 | None:intergenic |
| GGAGTTGATGGTTGCGATTG+CGG | 0.543181 | 2_3:+11380317 | None:intergenic |
| GCATAAGATCAAAGACTTGG+AGG | 0.544967 | 2_3:-11379452 | Msa0278370:CDS |
| AGAAGAAGAATAGAAAATGT+AGG | 0.546014 | 2_3:-11374967 | Msa0278370:three_prime_UTR |
| GAAAATGCTGCTAGGCTCGA+GGG | 0.547420 | 2_3:-11378851 | Msa0278370:CDS |
| TCGGAATCGCGGTGGTTGAG+AGG | 0.548735 | 2_3:+11380420 | None:intergenic |
| AAGGATTGAGCCGTTGGAGA+GGG | 0.549405 | 2_3:-11379701 | Msa0278370:CDS |
| TAAGTTTCATAAGATAATTG+AGG | 0.549470 | 2_3:-11379734 | Msa0278370:CDS |
| ATGCTTGGGAGGAAAAGTGT+TGG | 0.549756 | 2_3:-11379495 | Msa0278370:CDS |
| TGATGACATCAAGAGAAGTT+CGG | 0.549998 | 2_3:-11378918 | Msa0278370:CDS |
| GTTGGAGGCGCAATTGGAGG+AGG | 0.550019 | 2_3:-11379824 | Msa0278370:CDS |
| GAGCAAAATATGGAGCTGAA+TGG | 0.553849 | 2_3:+11375093 | None:intergenic |
| GAGAAGATTTGAAAGAGATG+TGG | 0.554044 | 2_3:+11380274 | None:intergenic |
| TGAGGAGCTTAAGACGAAAG+TGG | 0.557541 | 2_3:-11379611 | Msa0278370:CDS |
| ACCCATGATTTCAGCAGGCG+TGG | 0.557805 | 2_3:+11378985 | None:intergenic |
| ATTTGTTTAGCGGAAGGGGA+AGG | 0.562432 | 2_3:+11380252 | None:intergenic |
| CGAAAATGCTGCTAGGCTCG+AGG | 0.569406 | 2_3:-11378852 | Msa0278370:CDS |
| GGTAGGAAGTGTCTTTGGGT+TGG | 0.569598 | 2_3:+11380457 | None:intergenic |
| AGCATTGAAGGCCATTGATG+CGG | 0.572473 | 2_3:+11380093 | None:intergenic |
| AAAGAGAAGGGTGTGTTGGA+AGG | 0.573060 | 2_3:-11379766 | Msa0278370:CDS |
| GGATTCCGACGGAGGAAGGG+CGG | 0.574947 | 2_3:+11380379 | None:intergenic |
| TCAGTATGTGTTGAATCCCA+AGG | 0.575703 | 2_3:-11379011 | Msa0278370:CDS |
| TCATGAGAAGTCTGTTGCTG+AGG | 0.576689 | 2_3:-11379881 | Msa0278370:CDS |
| CGAGGCTATTCTTGATATGG+AGG | 0.579105 | 2_3:-11379926 | Msa0278370:CDS |
| TCTTTGTAAAGGTCGAATGA+GGG | 0.585965 | 2_3:+11380357 | None:intergenic |
| GCTGCTGACGAGACTGATGT+CGG | 0.586008 | 2_3:+11380401 | None:intergenic |
| GAAGCAATTGGAGGCGAAGG+TGG | 0.589483 | 2_3:-11379662 | Msa0278370:CDS |
| TAATTGAGGAGTTTGGGTCA+AGG | 0.591021 | 2_3:-11379720 | Msa0278370:CDS |
| TGTGGAAATTGTGAGAGGCG+AGG | 0.592842 | 2_3:+11380292 | None:intergenic |
| GGAGTTGCACGCTGTTGAGA+GGG | 0.593133 | 2_3:-11379545 | Msa0278370:CDS |
| ACCACGCCTGCTGAAATCAT+GGG | 0.594180 | 2_3:-11378986 | Msa0278370:CDS |
| ATTGCAACCAGGCCCTTAGG+AGG | 0.594319 | 2_3:-11379417 | Msa0278370:intron |
| AGGAGTTGCACGCTGTTGAG+AGG | 0.594789 | 2_3:-11379546 | Msa0278370:CDS |
| CCAGCTAGCTGATCATGATG+TGG | 0.595217 | 2_3:-11376354 | Msa0278370:CDS |
| TTGCATTCAACAACAACAAG+AGG | 0.601199 | 2_3:-11380569 | Msa0278370:five_prime_UTR |
| GAAGAAATTCAAATGCATGC+CGG | 0.605310 | 2_3:-11375580 | Msa0278370:CDS |
| TTGCGGATTGTTGATAGGAA+CGG | 0.605871 | 2_3:+11380334 | None:intergenic |
| GGAGAAGGAGAAGCAATTGG+AGG | 0.606698 | 2_3:-11379671 | Msa0278370:CDS |
| TGTTGAGAGGGATGCTGGTG+AGG | 0.608981 | 2_3:-11379533 | Msa0278370:CDS |
| CAAGGATTGAGCCGTTGGAG+AGG | 0.615648 | 2_3:-11379702 | Msa0278370:CDS |
| AAAGTTTCAGAGATTAGAAG+CGG | 0.616241 | 2_3:-11375502 | Msa0278370:CDS |
| GGAATCGCGGTGGTTGAGAG+GGG | 0.616778 | 2_3:+11380422 | None:intergenic |
| AAGTTTCAGAGATTAGAAGC+GGG | 0.618896 | 2_3:-11375501 | Msa0278370:CDS |
| CTTTGTAAAGGTCGAATGAG+GGG | 0.618950 | 2_3:+11380358 | None:intergenic |
| ACTTGCTAGGAATGCTTGGG+AGG | 0.620037 | 2_3:-11379506 | Msa0278370:CDS |
| AGTCCGCCGAAAATGCTGCT+AGG | 0.620707 | 2_3:-11378859 | Msa0278370:CDS |
| CAGTATGTGTTGAATCCCAA+GGG | 0.630232 | 2_3:-11379010 | Msa0278370:CDS |
| CATGATAAAGAAAGAAACAC+AGG | 0.630583 | 2_3:-11376426 | Msa0278370:CDS |
| CTCATCCTTCTTAGACGGCG+CGG | 0.632977 | 2_3:+11379795 | None:intergenic |
| TCAAAGTATAAAGAACATGT+GGG | 0.633300 | 2_3:-11375529 | Msa0278370:CDS |
| TATGGAAAGAGAGGCAGCTG+AGG | 0.635705 | 2_3:-11376327 | Msa0278370:CDS |
| CAGCTAGCTGATCATGATGT+GGG | 0.635721 | 2_3:-11376353 | Msa0278370:CDS |
| TGTGGGCATTATGGAAAGAG+AGG | 0.640887 | 2_3:-11376336 | Msa0278370:CDS |
| AAAATGCTGCTAGGCTCGAG+GGG | 0.643960 | 2_3:-11378850 | Msa0278370:CDS |
| GAATGAGGGGATTCCGACGG+AGG | 0.648475 | 2_3:+11380371 | None:intergenic |
| CGAGACTGATGTCGGAATCG+CGG | 0.650272 | 2_3:+11380409 | None:intergenic |
| TTAATGCGAGGGATGTGGAG+AGG | 0.655098 | 2_3:-11379576 | Msa0278370:CDS |
| TCCGCCAAAACCCTCTCCAA+CGG | 0.655375 | 2_3:+11379691 | None:intergenic |
| TGCATTCAACAACAACAAGA+GGG | 0.659772 | 2_3:-11380568 | Msa0278370:five_prime_UTR |
| GTCGAATGAGGGGATTCCGA+CGG | 0.660588 | 2_3:+11380368 | None:intergenic |
| GACTGATGTCGGAATCGCGG+TGG | 0.661612 | 2_3:+11380412 | None:intergenic |
| TGCCGAAGCTAAGAAGATGT+CGG | 0.664082 | 2_3:-11376384 | Msa0278370:CDS |
| GGAGAATGAGAGGATTGTTG+AGG | 0.664358 | 2_3:-11379638 | Msa0278370:CDS |
| CATTGAAGGCCATTGATGCG+GGG | 0.679311 | 2_3:+11380095 | None:intergenic |
| TGAGAGGGATGCTGGTGAGG+CGG | 0.679707 | 2_3:-11379530 | Msa0278370:CDS |
| TCTCTCCATAGATTGCAACC+AGG | 0.696902 | 2_3:-11379428 | Msa0278370:CDS |
| TGACATCAAGAGAAGTTCGG+TGG | 0.704206 | 2_3:-11378915 | Msa0278370:CDS |
| AGAGATGTGGAAATTGTGAG+AGG | 0.708472 | 2_3:+11380287 | None:intergenic |
| GAAATTCAAGGAGTTCGGTG+AGG | 0.740280 | 2_3:+11380211 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATAATAATATTAATAAT+AGG | - | chr2_3:11378777-11378796 | Msa0278370:intron | 0.0% |
| !! | TTGATTTATTAAGTTTAAAA+GGG | + | chr2_3:11375403-11375422 | None:intergenic | 10.0% |
| !!! | ATTGATTTATTAAGTTTAAA+AGG | + | chr2_3:11375404-11375423 | None:intergenic | 10.0% |
| !!! | AATTATCTTAATTTTATTAG+AGG | - | chr2_3:11375581-11375600 | Msa0278370:CDS | 10.0% |
| !! | AGAGTAAAAAAATTAAAAAA+AGG | - | chr2_3:11377584-11377603 | Msa0278370:intron | 10.0% |
| !! | GAGTAAAAAAATTAAAAAAA+GGG | - | chr2_3:11377585-11377604 | Msa0278370:intron | 10.0% |
| !!! | AGTATTTTAATTTTGTTTTT+CGG | + | chr2_3:11378887-11378906 | None:intergenic | 10.0% |
| !!! | ATATATAACTATATTTTTCT+GGG | + | chr2_3:11380108-11380127 | None:intergenic | 10.0% |
| !!! | AATATATAACTATATTTTTC+TGG | + | chr2_3:11380109-11380128 | None:intergenic | 10.0% |
| !! | AGAAAAATATAGTTATATAT+TGG | - | chr2_3:11380108-11380127 | Msa0278370:CDS | 10.0% |
| !! | CATAACAATAATATTCTATT+TGG | - | chr2_3:11375545-11375564 | Msa0278370:CDS | 15.0% |
| !! | ACAAATGATTATAATACAAA+CGG | + | chr2_3:11376180-11376199 | None:intergenic | 15.0% |
| !! | AAAATATAGTTATATATTGG+AGG | - | chr2_3:11380111-11380130 | Msa0278370:CDS | 15.0% |
| !!! | TGGTTAATTTTTTTTTTTGA+AGG | - | chr2_3:11380333-11380352 | Msa0278370:CDS | 15.0% |
| !!! | ATGAGATTTGAATTTTGTAT+CGG | + | chr2_3:11374940-11374959 | None:intergenic | 20.0% |
| !! | TAAGTTTCATAAGATAATTG+AGG | - | chr2_3:11375802-11375821 | Msa0278370:intron | 20.0% |
| !! | AAATGATTATAATACAAACG+GGG | + | chr2_3:11376178-11376197 | None:intergenic | 20.0% |
| !! | CAAATGATTATAATACAAAC+GGG | + | chr2_3:11376179-11376198 | None:intergenic | 20.0% |
| !! | ATAATCAATCTAAGAAAACT+AGG | + | chr2_3:11376837-11376856 | None:intergenic | 20.0% |
| !!! | GTTTGTTATGATAGAAATTA+AGG | - | chr2_3:11377132-11377151 | Msa0278370:intron | 20.0% |
| !!! | TACTGAAAAGTAATTTGTTA+AGG | - | chr2_3:11377167-11377186 | Msa0278370:intron | 20.0% |
| !!! | ACTGAAAAGTAATTTGTTAA+GGG | - | chr2_3:11377168-11377187 | Msa0278370:intron | 20.0% |
| !! | TTAGGAAAATAATGATCTAA+TGG | - | chr2_3:11377234-11377253 | Msa0278370:intron | 20.0% |
| !! | ATCAATTAAAAGAGTAGAAA+TGG | - | chr2_3:11377289-11377308 | Msa0278370:intron | 20.0% |
| !! | TGAACATTTATAGTTTCATT+TGG | + | chr2_3:11377471-11377490 | None:intergenic | 20.0% |
| !! | AAGTAAAATTTCAACATCAT+AGG | + | chr2_3:11377531-11377550 | None:intergenic | 20.0% |
| !!! | AAATCATTCATTGATTACTT+TGG | - | chr2_3:11377763-11377782 | Msa0278370:intron | 20.0% |
| !!! | AAATGCTCTTCAATTTTTTA+TGG | + | chr2_3:11378045-11378064 | None:intergenic | 20.0% |
| !! | GGCTCTATATTATAATTTAT+TGG | + | chr2_3:11378072-11378091 | None:intergenic | 20.0% |
| !! | CAATGTATATTATACTAGTA+TGG | - | chr2_3:11378166-11378185 | Msa0278370:intron | 20.0% |
| !! | TATATTATACTAGTATGGAT+GGG | - | chr2_3:11378171-11378190 | Msa0278370:intron | 20.0% |
| !! | AATAAGAAAATAAGTTCTGT+TGG | - | chr2_3:11378328-11378347 | Msa0278370:intron | 20.0% |
| !! | AAAAAAAAGGGGATATTATT+AGG | + | chr2_3:11378529-11378548 | None:intergenic | 20.0% |
| !! | TCAGAATTAGAACATTAATT+GGG | + | chr2_3:11378561-11378580 | None:intergenic | 20.0% |
| !! | ATCAGAATTAGAACATTAAT+TGG | + | chr2_3:11378562-11378581 | None:intergenic | 20.0% |
| !! | AAAAAATCCAAAAACTAAAC+TGG | + | chr2_3:11379440-11379459 | None:intergenic | 20.0% |
| !!! | TTGTGTTTCAATCATTTTTT+TGG | - | chr2_3:11379490-11379509 | Msa0278370:CDS | 20.0% |
| !! | TAGTAAATGATAATCAAACT+GGG | - | chr2_3:11379634-11379653 | Msa0278370:CDS | 20.0% |
| !!! | AACTTTTTATATTGTTGTCA+AGG | - | chr2_3:11379892-11379911 | Msa0278370:CDS | 20.0% |
| !! | AATCAACTTAAAAAGTTTAC+CGG | + | chr2_3:11379978-11379997 | None:intergenic | 20.0% |
| !!! | ATTCAATTCTCTGAATTTTA+CGG | + | chr2_3:11380141-11380160 | None:intergenic | 20.0% |
| !!! | CTTTTAAATATGAATGAATG+TGG | - | chr2_3:11380222-11380241 | Msa0278370:CDS | 20.0% |
| !!! | AAAGTAGGTTTTTTAGTATT+GGG | - | chr2_3:11380252-11380271 | Msa0278370:CDS | 20.0% |
| !!! | CTTTTAAATATGAATGAATG+TGG | - | chr2_3:11380222-11380241 | Msa0278370:CDS | 20.0% |
| !!! | AAAGTAGGTTTTTTAGTATT+GGG | - | chr2_3:11380252-11380271 | Msa0278370:CDS | 20.0% |
| !! | TGAGATTTGAATTTTGTATC+GGG | + | chr2_3:11374939-11374958 | None:intergenic | 25.0% |
| ! | ATAAGATAATTGAGGAGTTT+GGG | - | chr2_3:11375810-11375829 | Msa0278370:intron | 25.0% |
| ! | AAGAAAAAAAAACCTCCTAA+GGG | + | chr2_3:11376134-11376153 | None:intergenic | 25.0% |
| ! | AAAGAAAAAAAAACCTCCTA+AGG | + | chr2_3:11376135-11376154 | None:intergenic | 25.0% |
| ! | TACAAAATGTTGTCAAATAG+TGG | - | chr2_3:11376270-11376289 | Msa0278370:intron | 25.0% |
| ! | CTTGTGTGTTAATGTTAATA+GGG | - | chr2_3:11376440-11376459 | Msa0278370:CDS | 25.0% |
| ! | AGCGTTCATTACTATATTTA+AGG | - | chr2_3:11377082-11377101 | Msa0278370:intron | 25.0% |
| ! | ATTAAAAGAGTAGAAATGGA+TGG | - | chr2_3:11377293-11377312 | Msa0278370:intron | 25.0% |
| ! | TTAATTACTTAAACAACTCC+AGG | - | chr2_3:11377371-11377390 | Msa0278370:intron | 25.0% |
| ! | ACTATAAATGTTCATTTCAG+TGG | - | chr2_3:11377477-11377496 | Msa0278370:intron | 25.0% |
| !! | TTTTTACTCTTATACACGTA+TGG | + | chr2_3:11377574-11377593 | None:intergenic | 25.0% |
| ! | AAAGTTATAGTCAAACAGTA+AGG | - | chr2_3:11377841-11377860 | Msa0278370:intron | 25.0% |
| ! | TATAATATAGAGCCACAAAT+TGG | - | chr2_3:11378078-11378097 | Msa0278370:intron | 25.0% |
| ! | TTTATTTACTACTCCAGTTT+AGG | + | chr2_3:11378130-11378149 | None:intergenic | 25.0% |
| ! | GTATATTATACTAGTATGGA+TGG | - | chr2_3:11378170-11378189 | Msa0278370:intron | 25.0% |
| !!! | GTTTATTTCTGAATCATTGT+AGG | + | chr2_3:11378500-11378519 | None:intergenic | 25.0% |
| ! | CAATGATTCAGAAATAAACT+TGG | - | chr2_3:11378501-11378520 | Msa0278370:intron | 25.0% |
| ! | GGAAGAAAAAGAAAAAAAAG+GGG | + | chr2_3:11378540-11378559 | None:intergenic | 25.0% |
| ! | GGGAAGAAAAAGAAAAAAAA+GGG | + | chr2_3:11378541-11378560 | None:intergenic | 25.0% |
| ! | TGGGAAGAAAAAGAAAAAAA+AGG | + | chr2_3:11378542-11378561 | None:intergenic | 25.0% |
| ! | GTTACTTAAACTATGTACTT+TGG | + | chr2_3:11378809-11378828 | None:intergenic | 25.0% |
| ! | ACATAAACATTGTCAGAAAA+GGG | + | chr2_3:11378964-11378983 | None:intergenic | 25.0% |
| ! | AACATAAACATTGTCAGAAA+AGG | + | chr2_3:11378965-11378984 | None:intergenic | 25.0% |
| ! | GTTTATGTTACATTCTTTGT+TGG | - | chr2_3:11378976-11378995 | Msa0278370:CDS | 25.0% |
| ! | AGTTGTATTTGAACCAAATT+GGG | - | chr2_3:11379281-11379300 | Msa0278370:intron | 25.0% |
| ! | TTATTGTGTTTCAATGAACT+TGG | - | chr2_3:11379368-11379387 | Msa0278370:intron | 25.0% |
| ! | CAGTTTGATTATCATTTACT+AGG | + | chr2_3:11379635-11379654 | None:intergenic | 25.0% |
| ! | CTAGTAAATGATAATCAAAC+TGG | - | chr2_3:11379633-11379652 | Msa0278370:CDS | 25.0% |
| ! | ACAATGTTGTCACATAAATT+GGG | + | chr2_3:11379864-11379883 | None:intergenic | 25.0% |
| ! | TACAATGTTGTCACATAAAT+TGG | + | chr2_3:11379865-11379884 | None:intergenic | 25.0% |
| ! | TCAAAGTATAAAGAACATGT+GGG | - | chr2_3:11380007-11380026 | Msa0278370:CDS | 25.0% |
| !!! | GAAAGTAGGTTTTTTAGTAT+TGG | - | chr2_3:11380251-11380270 | Msa0278370:CDS | 25.0% |
| !!! | TTTTTTTGAAGGAATGAATG+TGG | - | chr2_3:11380344-11380363 | Msa0278370:CDS | 25.0% |
| !!! | GAAAGTAGGTTTTTTAGTAT+TGG | - | chr2_3:11380251-11380270 | Msa0278370:CDS | 25.0% |
| ! | ATGAATACAAGAGCAAAATA+TGG | + | chr2_3:11380456-11380475 | None:intergenic | 25.0% |
| ! | AGAAGAAGAATAGAAAATGT+AGG | - | chr2_3:11380569-11380588 | Msa0278370:five_prime_UTR | 25.0% |
| CATTTCAAAAAATCAATCCC+CGG | - | chr2_3:11375024-11375043 | Msa0278370:three_prime_UTR | 30.0% | |
| !! | TTTTTGTAACGGGAAATTCA+AGG | + | chr2_3:11375340-11375359 | None:intergenic | 30.0% |
| ! | ATCGTCTTCGATTTTTGTAA+CGG | + | chr2_3:11375351-11375370 | None:intergenic | 30.0% |
| TTGAAGAGTTTGAGAAGTAA+AGG | + | chr2_3:11375377-11375396 | None:intergenic | 30.0% | |
| !! | TGAATAAGACAAAGCATTGA+AGG | + | chr2_3:11375458-11375477 | None:intergenic | 30.0% |
| CATAAGATAATTGAGGAGTT+TGG | - | chr2_3:11375809-11375828 | Msa0278370:intron | 30.0% | |
| TATCTCAAAACAATAGCGTT+TGG | + | chr2_3:11376235-11376254 | None:intergenic | 30.0% | |
| TCAAATAGTGGTTGTTATAG+TGG | - | chr2_3:11376282-11376301 | Msa0278370:intron | 30.0% | |
| GCTTGTGTGTTAATGTTAAT+AGG | - | chr2_3:11376439-11376458 | Msa0278370:CDS | 30.0% | |
| ! | ACAGGTATATTACTAGTTTG+AGG | + | chr2_3:11377045-11377064 | None:intergenic | 30.0% |
| AAATATAGTAATGAACGCTG+CGG | + | chr2_3:11377081-11377100 | None:intergenic | 30.0% | |
| ! | TATATTTAAGGTCAACGTTG+TGG | - | chr2_3:11377094-11377113 | Msa0278370:intron | 30.0% |
| ACGATTCTATGTTCTTAGTT+AGG | + | chr2_3:11377202-11377221 | None:intergenic | 30.0% | |
| TGATATATTATGCAGTATCC+TGG | + | chr2_3:11377392-11377411 | None:intergenic | 30.0% | |
| AACATCATAGGATTTGAATG+AGG | + | chr2_3:11377519-11377538 | None:intergenic | 30.0% | |
| ! | GATTACTTTGGTAATCTTTC+AGG | - | chr2_3:11377775-11377794 | Msa0278370:intron | 30.0% |
| CAATTAATTTACTCACACGA+TGG | + | chr2_3:11377878-11377897 | None:intergenic | 30.0% | |
| GTGCAAAATAGAGCATATAT+AGG | + | chr2_3:11377976-11377995 | None:intergenic | 30.0% | |
| ! | GCATTCATATTAAGCTTTGA+TGG | + | chr2_3:11378021-11378040 | None:intergenic | 30.0% |
| ! | AGCTGAATTTTACCAATTTG+TGG | + | chr2_3:11378093-11378112 | None:intergenic | 30.0% |
| TGGGTAGAAAATTATATTCC+AGG | - | chr2_3:11378190-11378209 | Msa0278370:intron | 30.0% | |
| ACCCACAATTACAAAAATAG+AGG | - | chr2_3:11378248-11378267 | Msa0278370:intron | 30.0% | |
| !!! | CCCTCTATTTTTGTAATTGT+GGG | + | chr2_3:11378252-11378271 | None:intergenic | 30.0% |
| CCCACAATTACAAAAATAGA+GGG | - | chr2_3:11378249-11378268 | Msa0278370:intron | 30.0% | |
| CCACAATTACAAAAATAGAG+GGG | - | chr2_3:11378250-11378269 | Msa0278370:intron | 30.0% | |
| AATTACAAAAATAGAGGGGA+GGG | - | chr2_3:11378254-11378273 | Msa0278370:intron | 30.0% | |
| ! | TTATCATGTCTCCATTTTGA+TGG | + | chr2_3:11378358-11378377 | None:intergenic | 30.0% |
| ! | GTGCTATTGCTTCATTTAAT+GGG | + | chr2_3:11378457-11378476 | None:intergenic | 30.0% |
| ! | TGTGCTATTGCTTCATTTAA+TGG | + | chr2_3:11378458-11378477 | None:intergenic | 30.0% |
| CATTCTAAGCTAAGATATCA+TGG | + | chr2_3:11378602-11378621 | None:intergenic | 30.0% | |
| TGATATCTTAGCTTAGAATG+TGG | - | chr2_3:11378602-11378621 | Msa0278370:intron | 30.0% | |
| ATTATTTAAACATTGTCGCG+TGG | + | chr2_3:11378765-11378784 | None:intergenic | 30.0% | |
| TTAAACTATGTACTTTGGAC+TGG | + | chr2_3:11378804-11378823 | None:intergenic | 30.0% | |
| ATTCTTTGTTGGAGTTAGAA+GGG | - | chr2_3:11378987-11379006 | Msa0278370:CDS | 30.0% | |
| TCAAACAACAGTCTTTACAA+AGG | + | chr2_3:11379036-11379055 | None:intergenic | 30.0% | |
| !!! | TTGTTGTTTTATTCACTAGC+TGG | - | chr2_3:11379074-11379093 | Msa0278370:intron | 30.0% |
| CATGATAAAGAAAGAAACAC+AGG | - | chr2_3:11379110-11379129 | Msa0278370:intron | 30.0% | |
| CAGTTGTATTTGAACCAAAT+TGG | - | chr2_3:11379280-11379299 | Msa0278370:intron | 30.0% | |
| GTTGTATTTGAACCAAATTG+GGG | - | chr2_3:11379282-11379301 | Msa0278370:intron | 30.0% | |
| TTGTATTTGAACCAAATTGG+GGG | - | chr2_3:11379283-11379302 | Msa0278370:intron | 30.0% | |
| AATATGCATTCCACATTGAT+TGG | - | chr2_3:11379403-11379422 | Msa0278370:intron | 30.0% | |
| GATTGAAACACAAGATCAAT+GGG | + | chr2_3:11379483-11379502 | None:intergenic | 30.0% | |
| TGATTGAAACACAAGATCAA+TGG | + | chr2_3:11379484-11379503 | None:intergenic | 30.0% | |
| AAGCTTGCAATAAAAAGGAA+TGG | + | chr2_3:11379605-11379624 | None:intergenic | 30.0% | |
| ! | TTCCTTTTTATTGCAAGCTT+TGG | - | chr2_3:11379605-11379624 | Msa0278370:CDS | 30.0% |
| AATATCCATGTTGCTAAGTT+TGG | + | chr2_3:11379787-11379806 | None:intergenic | 30.0% | |
| ! | ATTGGGAAAGATTTAAAACG+AGG | + | chr2_3:11379847-11379866 | None:intergenic | 30.0% |
| CTCAAAGTATAAAGAACATG+TGG | - | chr2_3:11380006-11380025 | Msa0278370:CDS | 30.0% | |
| AAAGTTTCAGAGATTAGAAG+CGG | - | chr2_3:11380034-11380053 | Msa0278370:CDS | 30.0% | |
| GAATGTGGTTAATTGAAAGT+AGG | - | chr2_3:11380237-11380256 | Msa0278370:CDS | 30.0% | |
| GAATGTGGTTAATTGAAAGT+AGG | - | chr2_3:11380237-11380256 | Msa0278370:CDS | 30.0% | |
| GCATCTTTACATCAAATTGA+TGG | + | chr2_3:11380485-11380504 | None:intergenic | 30.0% | |
| ! | TTTGAATTTTGTATCGGGAG+AGG | + | chr2_3:11374934-11374953 | None:intergenic | 35.0% |
| ! | TTGTTGTTGTTGAATGCAAC+GGG | + | chr2_3:11374966-11374985 | None:intergenic | 35.0% |
| !! | CTTGTTGTTGTTGAATGCAA+CGG | + | chr2_3:11374967-11374986 | None:intergenic | 35.0% |
| TTGCATTCAACAACAACAAG+AGG | - | chr2_3:11374967-11374986 | Msa0278370:three_prime_UTR | 35.0% | |
| TGCATTCAACAACAACAAGA+GGG | - | chr2_3:11374968-11374987 | Msa0278370:three_prime_UTR | 35.0% | |
| TCTTTGTAAAGGTCGAATGA+GGG | + | chr2_3:11375182-11375201 | None:intergenic | 35.0% | |
| GAGAAGATTTGAAAGAGATG+TGG | + | chr2_3:11375265-11375284 | None:intergenic | 35.0% | |
| ! | TCGTCTTCGATTTTTGTAAC+GGG | + | chr2_3:11375350-11375369 | None:intergenic | 35.0% |
| ! | CAATGCTTTGTCTTATTCAC+TGG | - | chr2_3:11375459-11375478 | Msa0278370:CDS | 35.0% |
| AAATTGCTGCTATAGTCTAG+CGG | - | chr2_3:11376201-11376220 | Msa0278370:intron | 35.0% | |
| ! | TTGCTGATAGCGTAAAATAG+AGG | + | chr2_3:11376344-11376363 | None:intergenic | 35.0% |
| GTTTCATTTCATGTGCTTCT+AGG | - | chr2_3:11376482-11376501 | Msa0278370:intron | 35.0% | |
| TGATGACATCAAGAGAAGTT+CGG | - | chr2_3:11376618-11376637 | Msa0278370:intron | 35.0% | |
| GGATAGAGATTGATTATGTG+TGG | - | chr2_3:11376889-11376908 | Msa0278370:intron | 35.0% | |
| GGGTAATGTTGTTGAATTGA+TGG | - | chr2_3:11376971-11376990 | Msa0278370:intron | 35.0% | |
| AGTCAAACATAAATGAGACC+AGG | + | chr2_3:11377022-11377041 | None:intergenic | 35.0% | |
| AATCGTACTCACTCAACATT+AGG | - | chr2_3:11377216-11377235 | Msa0278370:intron | 35.0% | |
| GAAACACTTACATTGAAGCA+AGG | + | chr2_3:11377339-11377358 | None:intergenic | 35.0% | |
| ATTTGGAAGCAGTATTGTAC+AGG | + | chr2_3:11377454-11377473 | None:intergenic | 35.0% | |
| ATAGGATTTGAATGAGGAAG+GGG | + | chr2_3:11377513-11377532 | None:intergenic | 35.0% | |
| CATAGGATTTGAATGAGGAA+GGG | + | chr2_3:11377514-11377533 | None:intergenic | 35.0% | |
| TCATAGGATTTGAATGAGGA+AGG | + | chr2_3:11377515-11377534 | None:intergenic | 35.0% | |
| ! | AAGGGACAACTATGATTTGT+CGG | - | chr2_3:11377603-11377622 | Msa0278370:intron | 35.0% |
| ATAGCATACACCTTCTACAT+AGG | - | chr2_3:11377710-11377729 | Msa0278370:intron | 35.0% | |
| TAGCATACACCTTCTACATA+GGG | - | chr2_3:11377711-11377730 | Msa0278370:intron | 35.0% | |
| ! | TTATTTCTCCCCTATGTAGA+AGG | + | chr2_3:11377723-11377742 | None:intergenic | 35.0% |
| ! | ATTTTATTCCTGTGCAGGTA+TGG | + | chr2_3:11377747-11377766 | None:intergenic | 35.0% |
| ! | GAATGATTTTATTCCTGTGC+AGG | + | chr2_3:11377752-11377771 | None:intergenic | 35.0% |
| CTGCAGAATCAACATCTAAA+TGG | - | chr2_3:11377811-11377830 | Msa0278370:intron | 35.0% | |
| TAGTCAAACAGTAAGGATTG+TGG | - | chr2_3:11377848-11377867 | Msa0278370:intron | 35.0% | |
| ! | TAAGCTTTGATGGACAATGT+CGG | + | chr2_3:11378011-11378030 | None:intergenic | 35.0% |
| ATGTAAAACCCTACCTAAAC+TGG | - | chr2_3:11378114-11378133 | Msa0278370:intron | 35.0% | |
| TTACTACTCCAGTTTAGGTA+GGG | + | chr2_3:11378125-11378144 | None:intergenic | 35.0% | |
| TTTACTACTCCAGTTTAGGT+AGG | + | chr2_3:11378126-11378145 | None:intergenic | 35.0% | |
| ACAATGATATGTGCTTGGAA+TGG | + | chr2_3:11378218-11378237 | None:intergenic | 35.0% | |
| GTTCTACAATGATATGTGCT+TGG | + | chr2_3:11378223-11378242 | None:intergenic | 35.0% | |
| !!! | CCCCTCTATTTTTGTAATTG+TGG | + | chr2_3:11378253-11378272 | None:intergenic | 35.0% |
| CAATTACAAAAATAGAGGGG+AGG | - | chr2_3:11378253-11378272 | Msa0278370:intron | 35.0% | |
| ATTACAAAAATAGAGGGGAG+GGG | - | chr2_3:11378255-11378274 | Msa0278370:intron | 35.0% | |
| CATGATAAAGCTTCTACTTG+TGG | - | chr2_3:11378370-11378389 | Msa0278370:intron | 35.0% | |
| ! | TTCTCTGCAATTTGTTTAGG+TGG | + | chr2_3:11378428-11378447 | None:intergenic | 35.0% |
| ! | GTCTTCTCTGCAATTTGTTT+AGG | + | chr2_3:11378431-11378450 | None:intergenic | 35.0% |
| GCTAAGATATCATGGAAAGA+AGG | + | chr2_3:11378594-11378613 | None:intergenic | 35.0% | |
| GGGTAATGTTGTTGAATTGA+TGG | - | chr2_3:11376971-11376990 | Msa0278370:intron | 35.0% | |
| CATTCTTTGTTGGAGTTAGA+AGG | - | chr2_3:11378986-11379005 | Msa0278370:CDS | 35.0% | |
| !! | GAGGTTCTAAAGGTAATATC+TGG | - | chr2_3:11379228-11379247 | Msa0278370:intron | 35.0% |
| TTGTGTTTCAATGAACTTGG+AGG | - | chr2_3:11379371-11379390 | Msa0278370:intron | 35.0% | |
| TGTGTTTCAATGAACTTGGA+GGG | - | chr2_3:11379372-11379391 | Msa0278370:intron | 35.0% | |
| AAACTAAACTGGCACGAAAT+TGG | + | chr2_3:11379429-11379448 | None:intergenic | 35.0% | |
| !!! | TTTCGTGCCAGTTTAGTTTT+TGG | - | chr2_3:11379430-11379449 | Msa0278370:CDS | 35.0% |
| TATGCACTCATATTCTTGCA+CGG | + | chr2_3:11379527-11379546 | None:intergenic | 35.0% | |
| TACGAAAAACATGCTAGATG+TGG | + | chr2_3:11379571-11379590 | None:intergenic | 35.0% | |
| AGCCAAAGCTTGCAATAAAA+AGG | + | chr2_3:11379610-11379629 | None:intergenic | 35.0% | |
| CTGGGAATGTTGAAGATAAA+AGG | - | chr2_3:11379652-11379671 | Msa0278370:CDS | 35.0% | |
| TGTAGTAACGAGTTAGTTCA+AGG | - | chr2_3:11379740-11379759 | Msa0278370:CDS | 35.0% | |
| GTAGTAACGAGTTAGTTCAA+GGG | - | chr2_3:11379741-11379760 | Msa0278370:CDS | 35.0% | |
| TGGAGATAGTTTAAGCTTGA+TGG | + | chr2_3:11379767-11379786 | None:intergenic | 35.0% | |
| TATCTCCAAACTTAGCAACA+TGG | - | chr2_3:11379779-11379798 | Msa0278370:CDS | 35.0% | |
| GAAGAAATTCAAATGCATGC+CGG | - | chr2_3:11379956-11379975 | Msa0278370:CDS | 35.0% | |
| AAGTTTCAGAGATTAGAAGC+GGG | - | chr2_3:11380035-11380054 | Msa0278370:CDS | 35.0% | |
| TACGTGCATCATTAGATTGA+AGG | - | chr2_3:11380534-11380553 | Msa0278370:five_prime_UTR | 35.0% | |
| CTTTGTAAAGGTCGAATGAG+GGG | + | chr2_3:11375181-11375200 | None:intergenic | 40.0% | |
| GTCTTTGTAAAGGTCGAATG+AGG | + | chr2_3:11375183-11375202 | None:intergenic | 40.0% | |
| GATAGGAACGGTCTTTGTAA+AGG | + | chr2_3:11375193-11375212 | None:intergenic | 40.0% | |
| ! | TTGCGGATTGTTGATAGGAA+CGG | + | chr2_3:11375205-11375224 | None:intergenic | 40.0% |
| AGAGATGTGGAAATTGTGAG+AGG | + | chr2_3:11375252-11375271 | None:intergenic | 40.0% | |
| ! | GGTTTCGTGGATTTGTTTAG+CGG | + | chr2_3:11375297-11375316 | None:intergenic | 40.0% |
| TGAGGAAAATTAGGGTTTCG+TGG | + | chr2_3:11375310-11375329 | None:intergenic | 40.0% | |
| ! | GAGTTCGGTGAGGAAAATTA+GGG | + | chr2_3:11375318-11375337 | None:intergenic | 40.0% |
| AACGGGAAATTCAAGGAGTT+CGG | + | chr2_3:11375333-11375352 | None:intergenic | 40.0% | |
| ! | TTTTATTAGAGGCGATGACG+AGG | - | chr2_3:11375592-11375611 | Msa0278370:CDS | 40.0% |
| TGACGAGGCTATTCTTGATA+TGG | - | chr2_3:11375607-11375626 | Msa0278370:CDS | 40.0% | |
| TGAGCAAACTGTTGTTGAGT+TGG | - | chr2_3:11375694-11375713 | Msa0278370:intron | 40.0% | |
| TCAAGCTCATCCTTCTTAGA+CGG | + | chr2_3:11375749-11375768 | None:intergenic | 40.0% | |
| GATGAGCTTGAGAAAGAGAA+GGG | - | chr2_3:11375758-11375777 | Msa0278370:intron | 40.0% | |
| TAATTGAGGAGTTTGGGTCA+AGG | - | chr2_3:11375816-11375835 | Msa0278370:intron | 40.0% | |
| ! | AGTTGCAGACTTTTAATGCG+AGG | - | chr2_3:11375948-11375967 | Msa0278370:intron | 40.0% |
| ! | GTTGCAGACTTTTAATGCGA+GGG | - | chr2_3:11375949-11375968 | Msa0278370:intron | 40.0% |
| GCATAAGATCAAAGACTTGG+AGG | - | chr2_3:11376084-11376103 | Msa0278370:intron | 40.0% | |
| !!! | TGCTATAGTCTAGCGGATTT+TGG | - | chr2_3:11376208-11376227 | Msa0278370:intron | 40.0% |
| ! | TGTGCTTCTAGGTTGAAGAT+TGG | - | chr2_3:11376493-11376512 | Msa0278370:intron | 40.0% |
| TCAGTATGTGTTGAATCCCA+AGG | - | chr2_3:11376525-11376544 | Msa0278370:intron | 40.0% | |
| CAGTATGTGTTGAATCCCAA+GGG | - | chr2_3:11376526-11376545 | Msa0278370:intron | 40.0% | |
| TCAAAACCCATGATTTCAGC+AGG | + | chr2_3:11376559-11376578 | None:intergenic | 40.0% | |
| TCTCTTGATGTCATCAGCAT+AGG | + | chr2_3:11376614-11376633 | None:intergenic | 40.0% | |
| TGTGCTTGTGCTTTACATGA+AGG | - | chr2_3:11376803-11376822 | Msa0278370:intron | 40.0% | |
| TCTATCCAAACTCACTCTCT+CGG | + | chr2_3:11376876-11376895 | None:intergenic | 40.0% | |
| TTGATTATGTGTGGACAGTG+TGG | - | chr2_3:11376898-11376917 | Msa0278370:intron | 40.0% | |
| TTCCACATTCTAATTCCTGC+AGG | + | chr2_3:11376941-11376960 | None:intergenic | 40.0% | |
| CAGGTACAAGTTAGAAACAC+AGG | + | chr2_3:11377003-11377022 | None:intergenic | 40.0% | |
| ! | CTGTGTTTCTAACTTGTACC+TGG | - | chr2_3:11377001-11377020 | Msa0278370:intron | 40.0% |
| AATATACCTGTGCATCCGTA+TGG | - | chr2_3:11377054-11377073 | Msa0278370:intron | 40.0% | |
| ATATACCTGTGCATCCGTAT+GGG | - | chr2_3:11377055-11377074 | Msa0278370:intron | 40.0% | |
| ! | AGGGACAACTATGATTTGTC+GGG | - | chr2_3:11377604-11377623 | Msa0278370:intron | 40.0% |
| AGCATACACCTTCTACATAG+GGG | - | chr2_3:11377712-11377731 | Msa0278370:intron | 40.0% | |
| GAAATAAACCATACCTGCAC+AGG | - | chr2_3:11377736-11377755 | Msa0278370:intron | 40.0% | |
| CTGACATCACTTCCTGAAAT+AGG | - | chr2_3:11377941-11377960 | Msa0278370:intron | 40.0% | |
| ACAATGTCGGGCTTCTTATT+TGG | + | chr2_3:11377998-11378017 | None:intergenic | 40.0% | |
| ! | AAGCTTTGATGGACAATGTC+GGG | + | chr2_3:11378010-11378029 | None:intergenic | 40.0% |
| CTGTTGGTACACCATCAAAA+TGG | - | chr2_3:11378344-11378363 | Msa0278370:intron | 40.0% | |
| ! | TTCTAAGAACAGTTCACTGC+TGG | - | chr2_3:11378397-11378416 | Msa0278370:intron | 40.0% |
| GTGCAACAAGTAAGAAACAC+AGG | + | chr2_3:11378669-11378688 | None:intergenic | 40.0% | |
| TTGTCAGAAAAGGGAAGAGT+GGG | + | chr2_3:11378955-11378974 | None:intergenic | 40.0% | |
| ATTGTCAGAAAAGGGAAGAG+TGG | + | chr2_3:11378956-11378975 | None:intergenic | 40.0% | |
| TCACTAGCTGGAAACTCAAA+TGG | - | chr2_3:11379086-11379105 | Msa0278370:intron | 40.0% | |
| TGATCATGATGTGGGCATTA+TGG | - | chr2_3:11379191-11379210 | Msa0278370:intron | 40.0% | |
| TTGAACCAAATTGGGGGAAA+AGG | - | chr2_3:11379289-11379308 | Msa0278370:intron | 40.0% | |
| ACGAAATTGGCCAATCAATG+TGG | + | chr2_3:11379416-11379435 | None:intergenic | 40.0% | |
| GAGCAAAATATGGAGCTGAA+TGG | + | chr2_3:11380446-11380465 | None:intergenic | 40.0% | |
| !! | GGAAGGTAGGAAGTGTCTTT+GGG | + | chr2_3:11375086-11375105 | None:intergenic | 45.0% |
| !! | TGGAAGGTAGGAAGTGTCTT+TGG | + | chr2_3:11375087-11375106 | None:intergenic | 45.0% |
| ! | TGCGATTGCGGATTGTTGAT+AGG | + | chr2_3:11375210-11375229 | None:intergenic | 45.0% |
| ATTTGTTTAGCGGAAGGGGA+AGG | + | chr2_3:11375287-11375306 | None:intergenic | 45.0% | |
| ! | GTGGATTTGTTTAGCGGAAG+GGG | + | chr2_3:11375291-11375310 | None:intergenic | 45.0% |
| ! | CGTGGATTTGTTTAGCGGAA+GGG | + | chr2_3:11375292-11375311 | None:intergenic | 45.0% |
| ! | TCGTGGATTTGTTTAGCGGA+AGG | + | chr2_3:11375293-11375312 | None:intergenic | 45.0% |
| ! | GGAGTTCGGTGAGGAAAATT+AGG | + | chr2_3:11375319-11375338 | None:intergenic | 45.0% |
| ! | GAAATTCAAGGAGTTCGGTG+AGG | + | chr2_3:11375328-11375347 | None:intergenic | 45.0% |
| ! | AGCATTGAAGGCCATTGATG+CGG | + | chr2_3:11375446-11375465 | None:intergenic | 45.0% |
| TCGACGAATTCGAGAGAGAT+AGG | + | chr2_3:11375508-11375527 | None:intergenic | 45.0% | |
| CGAGGCTATTCTTGATATGG+AGG | - | chr2_3:11375610-11375629 | Msa0278370:CDS | 45.0% | |
| TCATGAGAAGTCTGTTGCTG+AGG | - | chr2_3:11375655-11375674 | Msa0278370:intron | 45.0% | |
| !! | GCAAACTGTTGTTGAGTTGG+AGG | - | chr2_3:11375697-11375716 | Msa0278370:intron | 45.0% |
| GGATGAGCTTGAGAAAGAGA+AGG | - | chr2_3:11375757-11375776 | Msa0278370:intron | 45.0% | |
| ! | TGAGAAAGAGAAGGGTGTGT+TGG | - | chr2_3:11375766-11375785 | Msa0278370:intron | 45.0% |
| ! | AAAGAGAAGGGTGTGTTGGA+AGG | - | chr2_3:11375770-11375789 | Msa0278370:intron | 45.0% |
| GGAGAATGAGAGGATTGTTG+AGG | - | chr2_3:11375898-11375917 | Msa0278370:intron | 45.0% | |
| GAGGATTGTTGAGGAGAATG+AGG | - | chr2_3:11375907-11375926 | Msa0278370:intron | 45.0% | |
| TGAGGAGCTTAAGACGAAAG+TGG | - | chr2_3:11375925-11375944 | Msa0278370:intron | 45.0% | |
| ! | GACTTTTAATGCGAGGGATG+TGG | - | chr2_3:11375955-11375974 | Msa0278370:intron | 45.0% |
| !! | GGAACTTGCTAGGAATGCTT+GGG | - | chr2_3:11376027-11376046 | Msa0278370:intron | 45.0% |
| ! | ATGCTTGGGAGGAAAAGTGT+TGG | - | chr2_3:11376041-11376060 | Msa0278370:intron | 45.0% |
| !! | TGCTTGGGAGGAAAAGTGTT+GGG | - | chr2_3:11376042-11376061 | Msa0278370:intron | 45.0% |
| CGCGCATAAGATCAAAGACT+TGG | - | chr2_3:11376081-11376100 | Msa0278370:intron | 45.0% | |
| TCTCTCCATAGATTGCAACC+AGG | - | chr2_3:11376108-11376127 | Msa0278370:intron | 45.0% | |
| AAAAAAACCTCCTAAGGGCC+TGG | + | chr2_3:11376129-11376148 | None:intergenic | 45.0% | |
| CTAGTCAAGTGTGCACTGTT+TGG | - | chr2_3:11376386-11376405 | Msa0278370:CDS | 45.0% | |
| TCAGCATAGGATTCAAGCAC+AGG | + | chr2_3:11376601-11376620 | None:intergenic | 45.0% | |
| TGACATCAAGAGAAGTTCGG+TGG | - | chr2_3:11376621-11376640 | Msa0278370:intron | 45.0% | |
| ! | GAGAAGTTCGGTGGTGAAAT+TGG | - | chr2_3:11376630-11376649 | Msa0278370:intron | 45.0% |
| GGTGGTGAAATTGGAAGAGT+TGG | - | chr2_3:11376639-11376658 | Msa0278370:intron | 45.0% | |
| !! | TTCGGCGGACTTTTTCTGAA+GGG | + | chr2_3:11376668-11376687 | None:intergenic | 45.0% |
| !! | TTTCGGCGGACTTTTTCTGA+AGG | + | chr2_3:11376669-11376688 | None:intergenic | 45.0% |
| ATGTACCGAGAGAGTGAGTT+TGG | - | chr2_3:11376868-11376887 | Msa0278370:intron | 45.0% | |
| TAGAATGTGGAAGCTGATGC+AGG | - | chr2_3:11376949-11376968 | Msa0278370:intron | 45.0% | |
| AGAATGTGGAAGCTGATGCA+GGG | - | chr2_3:11376950-11376969 | Msa0278370:intron | 45.0% | |
| ! | GGGACAACTATGATTTGTCG+GGG | - | chr2_3:11377605-11377624 | Msa0278370:intron | 45.0% |
| ! | GGACAACTATGATTTGTCGG+GGG | - | chr2_3:11377606-11377625 | Msa0278370:intron | 45.0% |
| ! | AACTATGATTTGTCGGGGGT+AGG | - | chr2_3:11377610-11377629 | Msa0278370:intron | 45.0% |
| ! | ACTATGATTTGTCGGGGGTA+GGG | - | chr2_3:11377611-11377630 | Msa0278370:intron | 45.0% |
| CACTTCCTGAAATAGGCTTC+TGG | - | chr2_3:11377948-11377967 | Msa0278370:intron | 45.0% | |
| AGGATCCAGAAGCCTATTTC+AGG | + | chr2_3:11377956-11377975 | None:intergenic | 45.0% | |
| TATGTGCTTGGAATGGTTCC+TGG | + | chr2_3:11378211-11378230 | None:intergenic | 45.0% | |
| CTGAATCATTGTAGGTGTGC+TGG | + | chr2_3:11378492-11378511 | None:intergenic | 45.0% | |
| TGCCGAAGCTAAGAAGATGT+CGG | - | chr2_3:11379152-11379171 | Msa0278370:intron | 45.0% | |
| GTCCGACATCTTCTTAGCTT+CGG | + | chr2_3:11379157-11379176 | None:intergenic | 45.0% | |
| CAGCTAGCTGATCATGATGT+GGG | - | chr2_3:11379183-11379202 | Msa0278370:intron | 45.0% | |
| TGTGGGCATTATGGAAAGAG+AGG | - | chr2_3:11379200-11379219 | Msa0278370:intron | 45.0% | |
| TGGGTAGCAACTAGCATCTT+AGG | + | chr2_3:11379464-11379483 | None:intergenic | 45.0% | |
| !! | TAAATAAAATGATATTAAAA+TGG | - | chr2_3:11378142-11378161 | Msa0278370:intron | 5.0% |
| !! | AAATAAAATGATATTAAAAT+GGG | - | chr2_3:11378143-11378162 | Msa0278370:intron | 5.0% |
| !! | AAAATTAAAATACTATTAAA+AGG | - | chr2_3:11378893-11378912 | Msa0278370:CDS | 5.0% |
| !! | GTGGGTTGTCTCATTTTCCG+GGG | + | chr2_3:11375044-11375063 | None:intergenic | 50.0% |
| !!! | GGTGGGTTGTCTCATTTTCC+GGG | + | chr2_3:11375045-11375064 | None:intergenic | 50.0% |
| !!! | CGGTGGGTTGTCTCATTTTC+CGG | + | chr2_3:11375046-11375065 | None:intergenic | 50.0% |
| !! | AAGTGTCTTTGGGTTGGCGA+CGG | + | chr2_3:11375076-11375095 | None:intergenic | 50.0% |
| !! | GGTAGGAAGTGTCTTTGGGT+TGG | + | chr2_3:11375082-11375101 | None:intergenic | 50.0% |
| !! | GGAGTTGATGGTTGCGATTG+CGG | + | chr2_3:11375222-11375241 | None:intergenic | 50.0% |
| GAAATTGTGAGAGGCGAGGA+AGG | + | chr2_3:11375243-11375262 | None:intergenic | 50.0% | |
| TGTGGAAATTGTGAGAGGCG+AGG | + | chr2_3:11375247-11375266 | None:intergenic | 50.0% | |
| CATTGAAGGCCATTGATGCG+GGG | + | chr2_3:11375444-11375463 | None:intergenic | 50.0% | |
| GCATTGAAGGCCATTGATGC+GGG | + | chr2_3:11375445-11375464 | None:intergenic | 50.0% | |
| GTCTGTTGCTGAGGAGAAAC+TGG | - | chr2_3:11375664-11375683 | Msa0278370:intron | 50.0% | |
| !! | TGTTGAGTTGGAGGCGCAAT+TGG | - | chr2_3:11375706-11375725 | Msa0278370:intron | 50.0% |
| AAGGATTGAGCCGTTGGAGA+GGG | - | chr2_3:11375835-11375854 | Msa0278370:intron | 50.0% | |
| GGAGAAGGAGAAGCAATTGG+AGG | - | chr2_3:11375865-11375884 | Msa0278370:intron | 50.0% | |
| TTAATGCGAGGGATGTGGAG+AGG | - | chr2_3:11375960-11375979 | Msa0278370:intron | 50.0% | |
| GGATGTGGAGAGGATGAAGA+AGG | - | chr2_3:11375970-11375989 | Msa0278370:intron | 50.0% | |
| !! | CGGAACTTGCTAGGAATGCT+TGG | - | chr2_3:11376026-11376045 | Msa0278370:intron | 50.0% |
| ! | ACTTGCTAGGAATGCTTGGG+AGG | - | chr2_3:11376030-11376049 | Msa0278370:intron | 50.0% |
| AAGGGCCTGGTTGCAATCTA+TGG | + | chr2_3:11376116-11376135 | None:intergenic | 50.0% | |
| TAGATTGCAACCAGGCCCTT+AGG | - | chr2_3:11376116-11376135 | Msa0278370:intron | 50.0% | |
| AACCACGCCTGCTGAAATCA+TGG | - | chr2_3:11376549-11376568 | Msa0278370:intron | 50.0% | |
| ACCACGCCTGCTGAAATCAT+GGG | - | chr2_3:11376550-11376569 | Msa0278370:intron | 50.0% | |
| ! | CTCGAGCCTAGCAGCATTTT+CGG | + | chr2_3:11376686-11376705 | None:intergenic | 50.0% |
| GAAAATGCTGCTAGGCTCGA+GGG | - | chr2_3:11376685-11376704 | Msa0278370:intron | 50.0% | |
| AAAATGCTGCTAGGCTCGAG+GGG | - | chr2_3:11376686-11376705 | Msa0278370:intron | 50.0% | |
| TGGACAGTGTGGTATCAGAG+TGG | - | chr2_3:11376909-11376928 | Msa0278370:intron | 50.0% | |
| GGCCTGCAGGAATTAGAATG+TGG | - | chr2_3:11376936-11376955 | Msa0278370:intron | 50.0% | |
| GAATGTGGAAGCTGATGCAG+GGG | - | chr2_3:11376951-11376970 | Msa0278370:intron | 50.0% | |
| ! | CTATGATTTGTCGGGGGTAG+GGG | - | chr2_3:11377612-11377631 | Msa0278370:intron | 50.0% |
| ! | TATGATTTGTCGGGGGTAGG+GGG | - | chr2_3:11377613-11377632 | Msa0278370:intron | 50.0% |
| TAGAATGTGGAAGCTGACGC+AGG | - | chr2_3:11378615-11378634 | Msa0278370:intron | 50.0% | |
| AGAATGTGGAAGCTGACGCA+GGG | - | chr2_3:11378616-11378635 | Msa0278370:intron | 50.0% | |
| GGAGTCAGAGGACAAGTACA+AGG | + | chr2_3:11378744-11378763 | None:intergenic | 50.0% | |
| CCACATCATGATCAGCTAGC+TGG | + | chr2_3:11379185-11379204 | None:intergenic | 50.0% | |
| CCAGCTAGCTGATCATGATG+TGG | - | chr2_3:11379182-11379201 | Msa0278370:intron | 50.0% | |
| TATGGAAAGAGAGGCAGCTG+AGG | - | chr2_3:11379209-11379228 | Msa0278370:intron | 50.0% | |
| ! | AGAGGCAGCTGAGGTTCTAA+AGG | - | chr2_3:11379218-11379237 | Msa0278370:intron | 50.0% |
| ! | CATCGCCTTTTCCCCCAATT+TGG | + | chr2_3:11379297-11379316 | None:intergenic | 50.0% |
| CAAATTGGGGGAAAAGGCGA+TGG | - | chr2_3:11379295-11379314 | Msa0278370:intron | 50.0% | |
| CGAGACTGATGTCGGAATCG+CGG | + | chr2_3:11375130-11375149 | None:intergenic | 55.0% | |
| GCTGCTGACGAGACTGATGT+CGG | + | chr2_3:11375138-11375157 | None:intergenic | 55.0% | |
| GTCGAATGAGGGGATTCCGA+CGG | + | chr2_3:11375171-11375190 | None:intergenic | 55.0% | |
| AGAGGCGAGGAAGGAGTTGA+TGG | + | chr2_3:11375234-11375253 | None:intergenic | 55.0% | |
| ! | TGAGTTGGAGGCGCAATTGG+AGG | - | chr2_3:11375709-11375728 | Msa0278370:intron | 55.0% |
| CTCATCCTTCTTAGACGGCG+CGG | + | chr2_3:11375744-11375763 | None:intergenic | 55.0% | |
| TGGGTCAAGGATTGAGCCGT+TGG | - | chr2_3:11375829-11375848 | Msa0278370:intron | 55.0% | |
| CAAGGATTGAGCCGTTGGAG+AGG | - | chr2_3:11375834-11375853 | Msa0278370:intron | 55.0% | |
| ! | TGAGCCGTTGGAGAGGGTTT+TGG | - | chr2_3:11375841-11375860 | Msa0278370:intron | 55.0% |
| TCCGCCAAAACCCTCTCCAA+CGG | + | chr2_3:11375848-11375867 | None:intergenic | 55.0% | |
| GGCGGAGAAGGAGAAGCAAT+TGG | - | chr2_3:11375862-11375881 | Msa0278370:intron | 55.0% | |
| GGAGAAGCAATTGGAGGCGA+AGG | - | chr2_3:11375871-11375890 | Msa0278370:intron | 55.0% | |
| GAAGCAATTGGAGGCGAAGG+TGG | - | chr2_3:11375874-11375893 | Msa0278370:intron | 55.0% | |
| !! | CGAAGGTGGTGGAGAATGAG+AGG | - | chr2_3:11375888-11375907 | Msa0278370:intron | 55.0% |
| AGGAGTTGCACGCTGTTGAG+AGG | - | chr2_3:11375990-11376009 | Msa0278370:intron | 55.0% | |
| GGAGTTGCACGCTGTTGAGA+GGG | - | chr2_3:11375991-11376010 | Msa0278370:intron | 55.0% | |
| TGTTGAGAGGGATGCTGGTG+AGG | - | chr2_3:11376003-11376022 | Msa0278370:intron | 55.0% | |
| ATTGCAACCAGGCCCTTAGG+AGG | - | chr2_3:11376119-11376138 | Msa0278370:intron | 55.0% | |
| ACCCATGATTTCAGCAGGCG+TGG | + | chr2_3:11376554-11376573 | None:intergenic | 55.0% | |
| AGTCCGCCGAAAATGCTGCT+AGG | - | chr2_3:11376677-11376696 | Msa0278370:intron | 55.0% | |
| ! | GAGCCTAGCAGCATTTTCGG+CGG | + | chr2_3:11376683-11376702 | None:intergenic | 55.0% |
| CGAAAATGCTGCTAGGCTCG+AGG | - | chr2_3:11376684-11376703 | Msa0278370:intron | 55.0% | |
| GTGTGGTATCAGAGTGGTGC+TGG | - | chr2_3:11376915-11376934 | Msa0278370:intron | 55.0% | |
| AATGAACGCTGCGGCCCATA+CGG | + | chr2_3:11377072-11377091 | None:intergenic | 55.0% | |
| ! | ATGATTTGTCGGGGGTAGGG+GGG | - | chr2_3:11377614-11377633 | Msa0278370:intron | 55.0% |
| GAATGTGGAAGCTGACGCAG+GGG | - | chr2_3:11378617-11378636 | Msa0278370:intron | 55.0% | |
| ACATTGTCGCGTGGAGTCAG+AGG | + | chr2_3:11378756-11378775 | None:intergenic | 55.0% | |
| !! | GTCTTTGGGTTGGCGACGGT+GGG | + | chr2_3:11375072-11375091 | None:intergenic | 60.0% |
| !! | TGTCTTTGGGTTGGCGACGG+TGG | + | chr2_3:11375073-11375092 | None:intergenic | 60.0% |
| !! | AGGGGTTGGTGGTGGAAGGT+AGG | + | chr2_3:11375099-11375118 | None:intergenic | 60.0% |
| !! | TGAGAGGGGTTGGTGGTGGA+AGG | + | chr2_3:11375103-11375122 | None:intergenic | 60.0% |
| !! | TGGTTGAGAGGGGTTGGTGG+TGG | + | chr2_3:11375107-11375126 | None:intergenic | 60.0% |
| GGAATCGCGGTGGTTGAGAG+GGG | + | chr2_3:11375117-11375136 | None:intergenic | 60.0% | |
| CGGAATCGCGGTGGTTGAGA+GGG | + | chr2_3:11375118-11375137 | None:intergenic | 60.0% | |
| TCGGAATCGCGGTGGTTGAG+AGG | + | chr2_3:11375119-11375138 | None:intergenic | 60.0% | |
| GACTGATGTCGGAATCGCGG+TGG | + | chr2_3:11375127-11375146 | None:intergenic | 60.0% | |
| AGGGGATTCCGACGGAGGAA+GGG | + | chr2_3:11375163-11375182 | None:intergenic | 60.0% | |
| GAATGAGGGGATTCCGACGG+AGG | + | chr2_3:11375168-11375187 | None:intergenic | 60.0% | |
| ACCCTGCTACCCCGCATCAA+TGG | - | chr2_3:11375432-11375451 | Msa0278370:CDS | 60.0% | |
| GCCATTGATGCGGGGTAGCA+GGG | + | chr2_3:11375436-11375455 | None:intergenic | 60.0% | |
| ! | GTTGGAGGCGCAATTGGAGG+AGG | - | chr2_3:11375712-11375731 | Msa0278370:intron | 60.0% |
| GAGATCCGCGCCGTCTAAGA+AGG | - | chr2_3:11375736-11375755 | Msa0278370:intron | 60.0% | |
| !! | GCCGTTGGAGAGGGTTTTGG+CGG | - | chr2_3:11375844-11375863 | Msa0278370:intron | 60.0% |
| !! | GGAGAGGGTTTTGGCGGAGA+AGG | - | chr2_3:11375850-11375869 | Msa0278370:intron | 60.0% |
| GCAATTGGAGGCGAAGGTGG+TGG | - | chr2_3:11375877-11375896 | Msa0278370:intron | 60.0% | |
| CACGCTGTTGAGAGGGATGC+TGG | - | chr2_3:11375998-11376017 | Msa0278370:intron | 60.0% | |
| TGAGAGGGATGCTGGTGAGG+CGG | - | chr2_3:11376006-11376025 | Msa0278370:intron | 60.0% | |
| ! | CTGGTGAGGCGGAACTTGCT+AGG | - | chr2_3:11376017-11376036 | Msa0278370:intron | 60.0% |
| TCAGCAGGCGTGGTTCCCTT+GGG | + | chr2_3:11376544-11376563 | None:intergenic | 60.0% | |
| TTCAGCAGGCGTGGTTCCCT+TGG | + | chr2_3:11376545-11376564 | None:intergenic | 60.0% | |
| !! | TTTGGGTTGGCGACGGTGGG+TGG | + | chr2_3:11375069-11375088 | None:intergenic | 65.0% |
| CGGTGGTTGAGAGGGGTTGG+TGG | + | chr2_3:11375110-11375129 | None:intergenic | 65.0% | |
| TCGCGGTGGTTGAGAGGGGT+TGG | + | chr2_3:11375113-11375132 | None:intergenic | 65.0% | |
| GGATTCCGACGGAGGAAGGG+CGG | + | chr2_3:11375160-11375179 | None:intergenic | 65.0% | |
| GAGGGGATTCCGACGGAGGA+AGG | + | chr2_3:11375164-11375183 | None:intergenic | 65.0% | |
| GGCCATTGATGCGGGGTAGC+AGG | + | chr2_3:11375437-11375456 | None:intergenic | 65.0% | |
| !! | TCAGAGTGGTGCTGGCCTGC+AGG | - | chr2_3:11376923-11376942 | Msa0278370:intron | 65.0% |
| TGCGGCCCATACGGATGCAC+AGG | + | chr2_3:11377063-11377082 | None:intergenic | 65.0% | |
| AGCAGCCGCCCTTCCTCCGT+CGG | - | chr2_3:11375152-11375171 | Msa0278370:three_prime_UTR | 70.0% | |
| ! | TGGCGACGGTGGGTGGCGGT+GGG | + | chr2_3:11375062-11375081 | None:intergenic | 75.0% |
| ! | TTGGCGACGGTGGGTGGCGG+TGG | + | chr2_3:11375063-11375082 | None:intergenic | 75.0% |
| ! | GGGTTGGCGACGGTGGGTGG+CGG | + | chr2_3:11375066-11375085 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 11374927 | 11380631 | 11374927 | ID=Msa0278370;Name=Msa0278370 |
| chr2_3 | mRNA | 11374927 | 11380631 | 11374927 | ID=Msa0278370-mRNA-1;Parent=Msa0278370;Name=Msa0278370-mRNA-1;_AED=0.01;_eAED=0.01;_QI=123|1|1|1|0.75|0.6|5|438|577 |
| chr2_3 | exon | 11374927 | 11375203 | 11374927 | ID=Msa0278370-mRNA-1:exon:5103;Parent=Msa0278370-mRNA-1 |
| chr2_3 | exon | 11375235 | 11375644 | 11375235 | ID=Msa0278370-mRNA-1:exon:5102;Parent=Msa0278370-mRNA-1 |
| chr2_3 | exon | 11376319 | 11376465 | 11376319 | ID=Msa0278370-mRNA-1:exon:5101;Parent=Msa0278370-mRNA-1 |
| chr2_3 | exon | 11378808 | 11379054 | 11378808 | ID=Msa0278370-mRNA-1:exon:5100;Parent=Msa0278370-mRNA-1 |
| chr2_3 | exon | 11379418 | 11380631 | 11379418 | ID=Msa0278370-mRNA-1:exon:5099;Parent=Msa0278370-mRNA-1 |
| chr2_3 | five_prime_UTR | 11380509 | 11380631 | 11380509 | ID=Msa0278370-mRNA-1:five_prime_utr;Parent=Msa0278370-mRNA-1 |
| chr2_3 | CDS | 11379418 | 11380508 | 11379418 | ID=Msa0278370-mRNA-1:cds;Parent=Msa0278370-mRNA-1 |
| chr2_3 | CDS | 11378808 | 11379054 | 11378808 | ID=Msa0278370-mRNA-1:cds;Parent=Msa0278370-mRNA-1 |
| chr2_3 | CDS | 11376319 | 11376465 | 11376319 | ID=Msa0278370-mRNA-1:cds;Parent=Msa0278370-mRNA-1 |
| chr2_3 | CDS | 11375396 | 11375644 | 11375396 | ID=Msa0278370-mRNA-1:cds;Parent=Msa0278370-mRNA-1 |
| chr2_3 | three_prime_UTR | 11375235 | 11375395 | 11375235 | ID=Msa0278370-mRNA-1:three_prime_utr;Parent=Msa0278370-mRNA-1 |
| chr2_3 | three_prime_UTR | 11374927 | 11375203 | 11374927 | ID=Msa0278370-mRNA-1:three_prime_utr;Parent=Msa0278370-mRNA-1 |
| Gene Sequence |
| Protein sequence |
