Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0278330 | XP_003594432.1 | 95.667 | 577 | 23 | 1 | 1 | 577 | 1 | 575 | 0.0 | 1105 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0278330 | sp|Q9M1G5|NDC80_ARATH | 45.725 | 538 | 282 | 5 | 24 | 559 | 33 | 562 | 2.63e-163 | 480 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0278330 | G7IFT2 | 95.667 | 577 | 23 | 1 | 1 | 577 | 1 | 575 | 0.0 | 1105 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0198130 | Msa0278330 | 0.957055 | 6.812277e-115 | -8.615850e-47 |
| Msa0198230 | Msa0278330 | 0.923642 | 2.029717e-89 | -8.615850e-47 |
| Msa0278330 | Msa0278350 | 0.921924 | 1.914458e-88 | -8.615850e-47 |
| Msa0278330 | Msa0278370 | 0.964886 | 6.778071e-124 | -8.615850e-47 |
| Msa0278330 | Msa0278450 | 0.931984 | 1.678588e-94 | -8.615850e-47 |
| Msa0278330 | Msa0328080 | 0.848287 | 6.747401e-60 | -8.615850e-47 |
| Msa0278330 | Msa0328150 | 0.956699 | 1.592408e-114 | -8.615850e-47 |
| Msa0278330 | Msa0483100 | 0.819676 | 1.025152e-52 | -8.615850e-47 |
| Msa0278330 | Msa0534720 | 0.821953 | 3.069089e-53 | -8.615850e-47 |
| Msa0278330 | Msa1170350 | 0.924069 | 1.152564e-89 | -8.615850e-47 |
| Msa0278330 | Msa1320670 | 0.826856 | 2.155766e-54 | -8.615850e-47 |
| Msa0278330 | Msa1392580 | 0.802237 | 6.171891e-49 | -8.615850e-47 |
| Msa0278330 | Msa1397400 | 0.801237 | 9.900841e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0278330 | MtrunA17_Chr2g0291491 | 95.667 | 577 | 23 | 1 | 1 | 577 | 1 | 575 | 0.0 | 1105 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0278330 | AT3G54630.1 | 45.725 | 538 | 282 | 5 | 24 | 559 | 33 | 562 | 2.68e-164 | 480 |
Find 165 sgRNAs with CRISPR-Local
Find 393 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATAACAATAATATTCTATT+TGG | 0.158248 | 2_3:+11309277 | Msa0278330:CDS |
| ATTGATTTATTAAGTTTAAA+AGG | 0.160827 | 2_3:-11309133 | None:intergenic |
| CTATGTTATGTATACAAAAT+AGG | 0.178307 | 2_3:+11314341 | Msa0278330:three_prime_UTR |
| GGAGTTCGGTGAGGAAAATT+AGG | 0.203771 | 2_3:-11309048 | None:intergenic |
| TGGAAGGTAGGAAGTGTCTT+TGG | 0.259688 | 2_3:-11308816 | None:intergenic |
| CATAAGATAATTGAGGAGTT+TGG | 0.260608 | 2_3:+11309541 | Msa0278330:CDS |
| TTGGCGACGGTGGGTGGCGG+TGG | 0.276135 | 2_3:-11308792 | None:intergenic |
| GAGAAGTTCGGTGGTGAAAT+TGG | 0.292249 | 2_3:+11310362 | Msa0278330:CDS |
| TGAGCCGTTGGAGAGGGTTT+TGG | 0.311584 | 2_3:+11309573 | Msa0278330:CDS |
| AAGGGCCTGGTTGCAATCTA+TGG | 0.332441 | 2_3:-11309845 | None:intergenic |
| ATAAGATAATTGAGGAGTTT+GGG | 0.338703 | 2_3:+11309542 | Msa0278330:CDS |
| TTCAGCAGGCGTGGTTCCCT+TGG | 0.339122 | 2_3:-11310274 | None:intergenic |
| ATGAATACAAGAGCAAAATA+TGG | 0.344269 | 2_3:-11314183 | None:intergenic |
| GGAAGGTAGGAAGTGTCTTT+GGG | 0.347036 | 2_3:-11308815 | None:intergenic |
| GGCCATTGATGCGGGGTAGC+AGG | 0.360117 | 2_3:-11309166 | None:intergenic |
| CAATGCTTTGTCTTATTCAC+TGG | 0.360486 | 2_3:+11309191 | Msa0278330:CDS |
| TGATCATGATGTGGGCATTA+TGG | 0.365375 | 2_3:+11312921 | Msa0278330:CDS |
| GTCTGTTGCTGAGGAGAAAC+TGG | 0.366375 | 2_3:+11309396 | Msa0278330:CDS |
| TATGTTATGTATACAAAATA+GGG | 0.372003 | 2_3:+11314342 | Msa0278330:three_prime_UTR |
| TGACGAGGCTATTCTTGATA+TGG | 0.379772 | 2_3:+11309339 | Msa0278330:CDS |
| GTCTTTGGGTTGGCGACGGT+GGG | 0.391931 | 2_3:-11308801 | None:intergenic |
| GAGTTCGGTGAGGAAAATTA+GGG | 0.399786 | 2_3:-11309047 | None:intergenic |
| TGGTTGAGAGGGGTTGGTGG+TGG | 0.400749 | 2_3:-11308836 | None:intergenic |
| GTCCGACATCTTCTTAGCTT+CGG | 0.401875 | 2_3:-11312884 | None:intergenic |
| GCATCTTTACATCAAATTGA+TGG | 0.403182 | 2_3:-11314212 | None:intergenic |
| GGCATCTGAATTGAAGTTGC+AGG | 0.406818 | 2_3:+11313643 | Msa0278330:intron |
| TTGAAGAGTTTGAGAAGTAA+AGG | 0.409288 | 2_3:-11309106 | None:intergenic |
| GGGTTGGCGACGGTGGGTGG+CGG | 0.420965 | 2_3:-11308795 | None:intergenic |
| TGAATAAGACAAAGCATTGA+AGG | 0.425794 | 2_3:-11309187 | None:intergenic |
| TGTTGAGTTGGAGGCGCAAT+TGG | 0.435358 | 2_3:+11309438 | Msa0278330:CDS |
| TCACTAGCTGGAAACTCAAA+TGG | 0.437352 | 2_3:+11312816 | Msa0278330:intron |
| CGGAACTTGCTAGGAATGCT+TGG | 0.439222 | 2_3:+11309758 | Msa0278330:CDS |
| AGGGGTTGGTGGTGGAAGGT+AGG | 0.444653 | 2_3:-11308828 | None:intergenic |
| TGAGAAAGAGAAGGGTGTGT+TGG | 0.446077 | 2_3:+11309498 | Msa0278330:CDS |
| TTGATTTATTAAGTTTAAAA+GGG | 0.447323 | 2_3:-11309132 | None:intergenic |
| TGCGATTGCGGATTGTTGAT+AGG | 0.448386 | 2_3:-11308939 | None:intergenic |
| GAAATTGTGAGAGGCGAGGA+AGG | 0.448991 | 2_3:-11308972 | None:intergenic |
| AACCACGCCTGCTGAAATCA+TGG | 0.451028 | 2_3:+11310281 | Msa0278330:CDS |
| TAGATTGCAACCAGGCCCTT+AGG | 0.451842 | 2_3:+11309848 | Msa0278330:CDS |
| TACGTGCATCATTAGATTGA+AGG | 0.458764 | 2_3:+11314264 | Msa0278330:three_prime_UTR |
| TGAGAGGGGTTGGTGGTGGA+AGG | 0.460898 | 2_3:-11308832 | None:intergenic |
| GAATGTGGTTAATTGAAAGT+AGG | 0.462877 | 2_3:+11313967 | Msa0278330:three_prime_UTR |
| GAATGTGGTTAATTGAAAGT+AGG | 0.462877 | 2_3:+11314089 | Msa0278330:three_prime_UTR |
| TGTGCTTCTAGGTTGAAGAT+TGG | 0.463038 | 2_3:+11310225 | Msa0278330:intron |
| GGCGGAGAAGGAGAAGCAAT+TGG | 0.464127 | 2_3:+11309594 | Msa0278330:CDS |
| TCAGCAGGCGTGGTTCCCTT+GGG | 0.464966 | 2_3:-11310273 | None:intergenic |
| AACGGGAAATTCAAGGAGTT+CGG | 0.466119 | 2_3:-11309062 | None:intergenic |
| AGAGGCAGCTGAGGTTCTAA+AGG | 0.469279 | 2_3:+11312948 | Msa0278330:CDS |
| ACCCTGCTACCCCGCATCAA+TGG | 0.472909 | 2_3:+11309164 | Msa0278330:CDS |
| CGCGCATAAGATCAAAGACT+TGG | 0.473475 | 2_3:+11309813 | Msa0278330:CDS |
| TGTCTTTGGGTTGGCGACGG+TGG | 0.473790 | 2_3:-11308802 | None:intergenic |
| AGAGGCGAGGAAGGAGTTGA+TGG | 0.475835 | 2_3:-11308963 | None:intergenic |
| GAGGGGATTCCGACGGAGGA+AGG | 0.476947 | 2_3:-11308893 | None:intergenic |
| TGAGGAAAATTAGGGTTTCG+TGG | 0.477520 | 2_3:-11309039 | None:intergenic |
| TCGCGGTGGTTGAGAGGGGT+TGG | 0.479818 | 2_3:-11308842 | None:intergenic |
| TCGACGAATTCGAGAGAGAT+AGG | 0.483008 | 2_3:-11309237 | None:intergenic |
| TGCTTGGGAGGAAAAGTGTT+GGG | 0.483018 | 2_3:+11309774 | Msa0278330:CDS |
| GCATTGAAGGCCATTGATGC+GGG | 0.484798 | 2_3:-11309174 | None:intergenic |
| TGGCGACGGTGGGTGGCGGT+GGG | 0.488231 | 2_3:-11308791 | None:intergenic |
| GGTGGTGAAATTGGAAGAGT+TGG | 0.490182 | 2_3:+11310371 | Msa0278330:CDS |
| CGGAATCGCGGTGGTTGAGA+GGG | 0.491653 | 2_3:-11308847 | None:intergenic |
| CGGTGGTTGAGAGGGGTTGG+TGG | 0.491912 | 2_3:-11308839 | None:intergenic |
| TTTGGGTTGGCGACGGTGGG+TGG | 0.492725 | 2_3:-11308798 | None:intergenic |
| TTGTTGTTGTTGAATGCAAC+GGG | 0.498103 | 2_3:-11308696 | None:intergenic |
| GGATGTGGAGAGGATGAAGA+AGG | 0.500189 | 2_3:+11309702 | Msa0278330:CDS |
| TGGGTCAAGGATTGAGCCGT+TGG | 0.504005 | 2_3:+11309561 | Msa0278330:CDS |
| TCGTGGATTTGTTTAGCGGA+AGG | 0.505891 | 2_3:-11309022 | None:intergenic |
| GGAGAAGCAATTGGAGGCGA+AGG | 0.507967 | 2_3:+11309603 | Msa0278330:CDS |
| GCAATTGGAGGCGAAGGTGG+TGG | 0.508621 | 2_3:+11309609 | Msa0278330:CDS |
| GCAAACTGTTGTTGAGTTGG+AGG | 0.509033 | 2_3:+11309429 | Msa0278330:CDS |
| GAGATCCGCGCCGTCTAAGA+AGG | 0.509647 | 2_3:+11309468 | Msa0278330:CDS |
| TCAAGCTCATCCTTCTTAGA+CGG | 0.509935 | 2_3:-11309478 | None:intergenic |
| CTGGTGAGGCGGAACTTGCT+AGG | 0.511152 | 2_3:+11309749 | Msa0278330:CDS |
| GAGGATTGTTGAGGAGAATG+AGG | 0.511952 | 2_3:+11309639 | Msa0278330:CDS |
| CACGCTGTTGAGAGGGATGC+TGG | 0.512009 | 2_3:+11309730 | Msa0278330:CDS |
| AGCAGCCGCCCTTCCTCCGT+CGG | 0.512411 | 2_3:+11308884 | Msa0278330:CDS |
| GTCTTTGTAAAGGTCGAATG+AGG | 0.513877 | 2_3:-11308912 | None:intergenic |
| CGAAGGTGGTGGAGAATGAG+AGG | 0.518233 | 2_3:+11309620 | Msa0278330:CDS |
| AGGGGATTCCGACGGAGGAA+GGG | 0.518465 | 2_3:-11308892 | None:intergenic |
| CTTGTTGTTGTTGAATGCAA+CGG | 0.520747 | 2_3:-11308697 | None:intergenic |
| TGAGTTGGAGGCGCAATTGG+AGG | 0.523011 | 2_3:+11309441 | Msa0278330:CDS |
| GATAGGAACGGTCTTTGTAA+AGG | 0.523078 | 2_3:-11308922 | None:intergenic |
| TGAGCAAACTGTTGTTGAGT+TGG | 0.525689 | 2_3:+11309426 | Msa0278330:CDS |
| AAAATATAGTTATATATTGG+AGG | 0.526340 | 2_3:+11313841 | Msa0278330:CDS |
| TCAGCATAGGATTCAAGCAC+AGG | 0.527543 | 2_3:-11310330 | None:intergenic |
| GGAACTTGCTAGGAATGCTT+GGG | 0.527690 | 2_3:+11309759 | Msa0278330:CDS |
| CTCAAAGTATAAAGAACATG+TGG | 0.527765 | 2_3:+11313736 | Msa0278330:CDS |
| GCCATTGATGCGGGGTAGCA+GGG | 0.530312 | 2_3:-11309165 | None:intergenic |
| GTGGATTTGTTTAGCGGAAG+GGG | 0.530909 | 2_3:-11309020 | None:intergenic |
| GGATGAGCTTGAGAAAGAGA+AGG | 0.531000 | 2_3:+11309489 | Msa0278330:CDS |
| AAGTGTCTTTGGGTTGGCGA+CGG | 0.533107 | 2_3:-11308805 | None:intergenic |
| CCACATCATGATCAGCTAGC+TGG | 0.533202 | 2_3:-11312912 | None:intergenic |
| CGTGGATTTGTTTAGCGGAA+GGG | 0.535425 | 2_3:-11309021 | None:intergenic |
| GGTTTCGTGGATTTGTTTAG+CGG | 0.537126 | 2_3:-11309026 | None:intergenic |
| TCTCTTGATGTCATCAGCAT+AGG | 0.537512 | 2_3:-11310343 | None:intergenic |
| GATGAGCTTGAGAAAGAGAA+GGG | 0.537514 | 2_3:+11309490 | Msa0278330:CDS |
| TCAAAACCCATGATTTCAGC+AGG | 0.541601 | 2_3:-11310288 | None:intergenic |
| GGAGTTGATGGTTGCGATTG+CGG | 0.543181 | 2_3:-11308951 | None:intergenic |
| GCATAAGATCAAAGACTTGG+AGG | 0.544967 | 2_3:+11309816 | Msa0278330:CDS |
| AGAAGAAGAATAGAAAATGT+AGG | 0.546014 | 2_3:+11314299 | Msa0278330:three_prime_UTR |
| GAAAATGCTGCTAGGCTCGA+GGG | 0.547420 | 2_3:+11310417 | Msa0278330:CDS |
| TCGGAATCGCGGTGGTTGAG+AGG | 0.548735 | 2_3:-11308848 | None:intergenic |
| AAGGATTGAGCCGTTGGAGA+GGG | 0.549405 | 2_3:+11309567 | Msa0278330:CDS |
| TAAGTTTCATAAGATAATTG+AGG | 0.549470 | 2_3:+11309534 | Msa0278330:CDS |
| ATGCTTGGGAGGAAAAGTGT+TGG | 0.549756 | 2_3:+11309773 | Msa0278330:CDS |
| TGATGACATCAAGAGAAGTT+CGG | 0.549998 | 2_3:+11310350 | Msa0278330:CDS |
| GTTGGAGGCGCAATTGGAGG+AGG | 0.550019 | 2_3:+11309444 | Msa0278330:CDS |
| GAGCAAAATATGGAGCTGAA+TGG | 0.553849 | 2_3:-11314173 | None:intergenic |
| GAGAAGATTTGAAAGAGATG+TGG | 0.554044 | 2_3:-11308994 | None:intergenic |
| TGAGGAGCTTAAGACGAAAG+TGG | 0.557541 | 2_3:+11309657 | Msa0278330:CDS |
| ACCCATGATTTCAGCAGGCG+TGG | 0.557805 | 2_3:-11310283 | None:intergenic |
| ATTTGTTTAGCGGAAGGGGA+AGG | 0.562432 | 2_3:-11309016 | None:intergenic |
| CGAAAATGCTGCTAGGCTCG+AGG | 0.569406 | 2_3:+11310416 | Msa0278330:CDS |
| GGTAGGAAGTGTCTTTGGGT+TGG | 0.569598 | 2_3:-11308811 | None:intergenic |
| AGCATTGAAGGCCATTGATG+CGG | 0.572473 | 2_3:-11309175 | None:intergenic |
| AAAGAGAAGGGTGTGTTGGA+AGG | 0.573060 | 2_3:+11309502 | Msa0278330:CDS |
| GGATTCCGACGGAGGAAGGG+CGG | 0.574947 | 2_3:-11308889 | None:intergenic |
| TCAGTATGTGTTGAATCCCA+AGG | 0.575703 | 2_3:+11310257 | Msa0278330:CDS |
| TCATGAGAAGTCTGTTGCTG+AGG | 0.576689 | 2_3:+11309387 | Msa0278330:CDS |
| CGAGGCTATTCTTGATATGG+AGG | 0.579105 | 2_3:+11309342 | Msa0278330:CDS |
| TCTTTGTAAAGGTCGAATGA+GGG | 0.585965 | 2_3:-11308911 | None:intergenic |
| GCTGCTGACGAGACTGATGT+CGG | 0.586008 | 2_3:-11308867 | None:intergenic |
| GAAGCAATTGGAGGCGAAGG+TGG | 0.589483 | 2_3:+11309606 | Msa0278330:CDS |
| TAATTGAGGAGTTTGGGTCA+AGG | 0.591021 | 2_3:+11309548 | Msa0278330:CDS |
| TGTGGAAATTGTGAGAGGCG+AGG | 0.592842 | 2_3:-11308976 | None:intergenic |
| GGAGTTGCACGCTGTTGAGA+GGG | 0.593133 | 2_3:+11309723 | Msa0278330:CDS |
| ACCACGCCTGCTGAAATCAT+GGG | 0.594180 | 2_3:+11310282 | Msa0278330:CDS |
| ATTGCAACCAGGCCCTTAGG+AGG | 0.594319 | 2_3:+11309851 | Msa0278330:CDS |
| AGGAGTTGCACGCTGTTGAG+AGG | 0.594789 | 2_3:+11309722 | Msa0278330:CDS |
| CCAGCTAGCTGATCATGATG+TGG | 0.595217 | 2_3:+11312912 | Msa0278330:CDS |
| TTGCATTCAACAACAACAAG+AGG | 0.601199 | 2_3:+11308700 | Msa0278330:five_prime_UTR |
| GAAGAAATTCAAATGCATGC+CGG | 0.605310 | 2_3:+11313686 | Msa0278330:CDS |
| TTGCGGATTGTTGATAGGAA+CGG | 0.605871 | 2_3:-11308934 | None:intergenic |
| GGAGAAGGAGAAGCAATTGG+AGG | 0.606698 | 2_3:+11309597 | Msa0278330:CDS |
| TGTTGAGAGGGATGCTGGTG+AGG | 0.608981 | 2_3:+11309735 | Msa0278330:CDS |
| CAAGGATTGAGCCGTTGGAG+AGG | 0.615648 | 2_3:+11309566 | Msa0278330:CDS |
| AAAGTTTCAGAGATTAGAAG+CGG | 0.616241 | 2_3:+11313764 | Msa0278330:CDS |
| GGAATCGCGGTGGTTGAGAG+GGG | 0.616778 | 2_3:-11308846 | None:intergenic |
| AAGTTTCAGAGATTAGAAGC+GGG | 0.618896 | 2_3:+11313765 | Msa0278330:CDS |
| CTTTGTAAAGGTCGAATGAG+GGG | 0.618950 | 2_3:-11308910 | None:intergenic |
| ACTTGCTAGGAATGCTTGGG+AGG | 0.620037 | 2_3:+11309762 | Msa0278330:CDS |
| AGTCCGCCGAAAATGCTGCT+AGG | 0.620707 | 2_3:+11310409 | Msa0278330:CDS |
| CAGTATGTGTTGAATCCCAA+GGG | 0.630232 | 2_3:+11310258 | Msa0278330:CDS |
| CATGATAAAGAAAGAAACAC+AGG | 0.630583 | 2_3:+11312840 | Msa0278330:CDS |
| CTCATCCTTCTTAGACGGCG+CGG | 0.632977 | 2_3:-11309473 | None:intergenic |
| TCAAAGTATAAAGAACATGT+GGG | 0.633300 | 2_3:+11313737 | Msa0278330:CDS |
| TATGGAAAGAGAGGCAGCTG+AGG | 0.635705 | 2_3:+11312939 | Msa0278330:CDS |
| CAGCTAGCTGATCATGATGT+GGG | 0.635721 | 2_3:+11312913 | Msa0278330:CDS |
| TGTGGGCATTATGGAAAGAG+AGG | 0.640887 | 2_3:+11312930 | Msa0278330:CDS |
| AAAATGCTGCTAGGCTCGAG+GGG | 0.643960 | 2_3:+11310418 | Msa0278330:CDS |
| GAATGAGGGGATTCCGACGG+AGG | 0.648475 | 2_3:-11308897 | None:intergenic |
| CGAGACTGATGTCGGAATCG+CGG | 0.650272 | 2_3:-11308859 | None:intergenic |
| TTAATGCGAGGGATGTGGAG+AGG | 0.655098 | 2_3:+11309692 | Msa0278330:CDS |
| TCCGCCAAAACCCTCTCCAA+CGG | 0.655375 | 2_3:-11309577 | None:intergenic |
| TGCATTCAACAACAACAAGA+GGG | 0.659772 | 2_3:+11308701 | Msa0278330:five_prime_UTR |
| GTCGAATGAGGGGATTCCGA+CGG | 0.660588 | 2_3:-11308900 | None:intergenic |
| GACTGATGTCGGAATCGCGG+TGG | 0.661612 | 2_3:-11308856 | None:intergenic |
| TGCCGAAGCTAAGAAGATGT+CGG | 0.664082 | 2_3:+11312882 | Msa0278330:CDS |
| GGAGAATGAGAGGATTGTTG+AGG | 0.664358 | 2_3:+11309630 | Msa0278330:CDS |
| CATTGAAGGCCATTGATGCG+GGG | 0.679311 | 2_3:-11309173 | None:intergenic |
| TGAGAGGGATGCTGGTGAGG+CGG | 0.679707 | 2_3:+11309738 | Msa0278330:CDS |
| TCTCTCCATAGATTGCAACC+AGG | 0.696902 | 2_3:+11309840 | Msa0278330:CDS |
| TGACATCAAGAGAAGTTCGG+TGG | 0.704206 | 2_3:+11310353 | Msa0278330:CDS |
| AGAGATGTGGAAATTGTGAG+AGG | 0.708472 | 2_3:-11308981 | None:intergenic |
| GAAATTCAAGGAGTTCGGTG+AGG | 0.740280 | 2_3:-11309057 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATAATAATATTAATAAT+AGG | + | chr2_3:11312507-11312526 | Msa0278330:intron | 0.0% |
| !! | TTGATTTATTAAGTTTAAAA+GGG | - | chr2_3:11309135-11309154 | None:intergenic | 10.0% |
| !!! | ATTGATTTATTAAGTTTAAA+AGG | - | chr2_3:11309136-11309155 | None:intergenic | 10.0% |
| !!! | AATTATCTTAATTTTATTAG+AGG | + | chr2_3:11309313-11309332 | Msa0278330:CDS | 10.0% |
| !! | AGAGTAAAAAAATTAAAAAA+AGG | + | chr2_3:11311315-11311334 | Msa0278330:intron | 10.0% |
| !! | GAGTAAAAAAATTAAAAAAA+GGG | + | chr2_3:11311316-11311335 | Msa0278330:intron | 10.0% |
| !!! | AGTATTTTAATTTTGTTTTT+CGG | - | chr2_3:11312617-11312636 | None:intergenic | 10.0% |
| !!! | ATATATAACTATATTTTTCT+GGG | - | chr2_3:11313838-11313857 | None:intergenic | 10.0% |
| !!! | AATATATAACTATATTTTTC+TGG | - | chr2_3:11313839-11313858 | None:intergenic | 10.0% |
| !! | AGAAAAATATAGTTATATAT+TGG | + | chr2_3:11313838-11313857 | Msa0278330:CDS | 10.0% |
| !! | CATAACAATAATATTCTATT+TGG | + | chr2_3:11309277-11309296 | Msa0278330:CDS | 15.0% |
| !! | ACAAATGATTATAATACAAA+CGG | - | chr2_3:11309912-11309931 | None:intergenic | 15.0% |
| !! | AAAATATAGTTATATATTGG+AGG | + | chr2_3:11313841-11313860 | Msa0278330:CDS | 15.0% |
| !!! | TGGTTAATTTTTTTTTTTGA+AGG | + | chr2_3:11314063-11314082 | Msa0278330:intron | 15.0% |
| !!! | ATGAGATTTGAATTTTGTAT+CGG | - | chr2_3:11308673-11308692 | None:intergenic | 20.0% |
| !! | TAAGTTTCATAAGATAATTG+AGG | + | chr2_3:11309534-11309553 | Msa0278330:CDS | 20.0% |
| !! | AAATGATTATAATACAAACG+GGG | - | chr2_3:11309910-11309929 | None:intergenic | 20.0% |
| !! | CAAATGATTATAATACAAAC+GGG | - | chr2_3:11309911-11309930 | None:intergenic | 20.0% |
| !! | ATAATCAATCTAAGAAAACT+AGG | - | chr2_3:11310569-11310588 | None:intergenic | 20.0% |
| !!! | GTTTGTTATGATAGAAATTA+AGG | + | chr2_3:11310864-11310883 | Msa0278330:intron | 20.0% |
| !!! | TACTGAAAAGTAATTTGTTA+AGG | + | chr2_3:11310899-11310918 | Msa0278330:intron | 20.0% |
| !!! | ACTGAAAAGTAATTTGTTAA+GGG | + | chr2_3:11310900-11310919 | Msa0278330:intron | 20.0% |
| !! | TTAGGAAAATAATGATCTAA+TGG | + | chr2_3:11310966-11310985 | Msa0278330:intron | 20.0% |
| !! | ATCAATTAAAAGAGTAGAAA+TGG | + | chr2_3:11311021-11311040 | Msa0278330:intron | 20.0% |
| !! | TGAACATTTATAGTTTCATT+TGG | - | chr2_3:11311203-11311222 | None:intergenic | 20.0% |
| !! | AAGTAAAATTTCAACATCAT+AGG | - | chr2_3:11311262-11311281 | None:intergenic | 20.0% |
| !!! | AAATCATTCATTGATTACTT+TGG | + | chr2_3:11311493-11311512 | Msa0278330:intron | 20.0% |
| !!! | AAATGCTCTTCAATTTTTTA+TGG | - | chr2_3:11311775-11311794 | None:intergenic | 20.0% |
| !! | GGCTCTATATTATAATTTAT+TGG | - | chr2_3:11311802-11311821 | None:intergenic | 20.0% |
| !! | CAATGTATATTATACTAGTA+TGG | + | chr2_3:11311896-11311915 | Msa0278330:intron | 20.0% |
| !! | TATATTATACTAGTATGGAT+GGG | + | chr2_3:11311901-11311920 | Msa0278330:intron | 20.0% |
| !! | AATAAGAAAATAAGTTCTGT+TGG | + | chr2_3:11312058-11312077 | Msa0278330:intron | 20.0% |
| !! | AAAAAAAAGGGGATATTATT+AGG | - | chr2_3:11312259-11312278 | None:intergenic | 20.0% |
| !! | TCAGAATTAGAACATTAATT+GGG | - | chr2_3:11312291-11312310 | None:intergenic | 20.0% |
| !! | ATCAGAATTAGAACATTAAT+TGG | - | chr2_3:11312292-11312311 | None:intergenic | 20.0% |
| !! | AAAAAATCCAAAAACTAAAC+TGG | - | chr2_3:11313170-11313189 | None:intergenic | 20.0% |
| !!! | TTGTGTTTCAATCATTTTTT+TGG | + | chr2_3:11313220-11313239 | Msa0278330:intron | 20.0% |
| !! | TAGTAAATGATAATCAAACT+GGG | + | chr2_3:11313364-11313383 | Msa0278330:intron | 20.0% |
| !!! | AACTTTTTATATTGTTGTCA+AGG | + | chr2_3:11313622-11313641 | Msa0278330:intron | 20.0% |
| !! | AATCAACTTAAAAAGTTTAC+CGG | - | chr2_3:11313708-11313727 | None:intergenic | 20.0% |
| !!! | ATTCAATTCTCTGAATTTTA+CGG | - | chr2_3:11313871-11313890 | None:intergenic | 20.0% |
| !!! | CTTTTAAATATGAATGAATG+TGG | + | chr2_3:11313952-11313971 | Msa0278330:three_prime_UTR | 20.0% |
| !!! | AAAGTAGGTTTTTTAGTATT+GGG | + | chr2_3:11313982-11314001 | Msa0278330:three_prime_UTR | 20.0% |
| !!! | CTTTTAAATATGAATGAATG+TGG | + | chr2_3:11313952-11313971 | Msa0278330:three_prime_UTR | 20.0% |
| !!! | AAAGTAGGTTTTTTAGTATT+GGG | + | chr2_3:11313982-11314001 | Msa0278330:three_prime_UTR | 20.0% |
| !! | TGAGATTTGAATTTTGTATC+GGG | - | chr2_3:11308672-11308691 | None:intergenic | 25.0% |
| ! | ATAAGATAATTGAGGAGTTT+GGG | + | chr2_3:11309542-11309561 | Msa0278330:CDS | 25.0% |
| ! | AAGAAAAAAAAACCTCCTAA+GGG | - | chr2_3:11309866-11309885 | None:intergenic | 25.0% |
| ! | AAAGAAAAAAAAACCTCCTA+AGG | - | chr2_3:11309867-11309886 | None:intergenic | 25.0% |
| ! | TACAAAATGTTGTCAAATAG+TGG | + | chr2_3:11310002-11310021 | Msa0278330:intron | 25.0% |
| ! | CTTGTGTGTTAATGTTAATA+GGG | + | chr2_3:11310172-11310191 | Msa0278330:intron | 25.0% |
| ! | AGCGTTCATTACTATATTTA+AGG | + | chr2_3:11310814-11310833 | Msa0278330:intron | 25.0% |
| ! | ATTAAAAGAGTAGAAATGGA+TGG | + | chr2_3:11311025-11311044 | Msa0278330:intron | 25.0% |
| ! | TTAATTACTTAAACAACTCC+AGG | + | chr2_3:11311103-11311122 | Msa0278330:intron | 25.0% |
| ! | ACTATAAATGTTCATTTCAG+TGG | + | chr2_3:11311209-11311228 | Msa0278330:intron | 25.0% |
| !! | TTTTTACTCTTATACACGTA+TGG | - | chr2_3:11311305-11311324 | None:intergenic | 25.0% |
| ! | AAAGTTATAGTCAAACAGTA+AGG | + | chr2_3:11311571-11311590 | Msa0278330:intron | 25.0% |
| ! | TATAATATAGAGCCACAAAT+TGG | + | chr2_3:11311808-11311827 | Msa0278330:intron | 25.0% |
| ! | TTTATTTACTACTCCAGTTT+AGG | - | chr2_3:11311860-11311879 | None:intergenic | 25.0% |
| ! | GTATATTATACTAGTATGGA+TGG | + | chr2_3:11311900-11311919 | Msa0278330:intron | 25.0% |
| !!! | GTTTATTTCTGAATCATTGT+AGG | - | chr2_3:11312230-11312249 | None:intergenic | 25.0% |
| ! | CAATGATTCAGAAATAAACT+TGG | + | chr2_3:11312231-11312250 | Msa0278330:intron | 25.0% |
| ! | GGAAGAAAAAGAAAAAAAAG+GGG | - | chr2_3:11312270-11312289 | None:intergenic | 25.0% |
| ! | GGGAAGAAAAAGAAAAAAAA+GGG | - | chr2_3:11312271-11312290 | None:intergenic | 25.0% |
| ! | TGGGAAGAAAAAGAAAAAAA+AGG | - | chr2_3:11312272-11312291 | None:intergenic | 25.0% |
| ! | GTTACTTAAACTATGTACTT+TGG | - | chr2_3:11312539-11312558 | None:intergenic | 25.0% |
| ! | ACATAAACATTGTCAGAAAA+GGG | - | chr2_3:11312694-11312713 | None:intergenic | 25.0% |
| ! | AACATAAACATTGTCAGAAA+AGG | - | chr2_3:11312695-11312714 | None:intergenic | 25.0% |
| ! | GTTTATGTTACATTCTTTGT+TGG | + | chr2_3:11312706-11312725 | Msa0278330:intron | 25.0% |
| ! | AGTTGTATTTGAACCAAATT+GGG | + | chr2_3:11313011-11313030 | Msa0278330:intron | 25.0% |
| ! | TTATTGTGTTTCAATGAACT+TGG | + | chr2_3:11313098-11313117 | Msa0278330:intron | 25.0% |
| ! | CAGTTTGATTATCATTTACT+AGG | - | chr2_3:11313365-11313384 | None:intergenic | 25.0% |
| ! | CTAGTAAATGATAATCAAAC+TGG | + | chr2_3:11313363-11313382 | Msa0278330:intron | 25.0% |
| ! | ACAATGTTGTCACATAAATT+GGG | - | chr2_3:11313594-11313613 | None:intergenic | 25.0% |
| ! | TACAATGTTGTCACATAAAT+TGG | - | chr2_3:11313595-11313614 | None:intergenic | 25.0% |
| ! | TCAAAGTATAAAGAACATGT+GGG | + | chr2_3:11313737-11313756 | Msa0278330:CDS | 25.0% |
| !!! | GAAAGTAGGTTTTTTAGTAT+TGG | + | chr2_3:11313981-11314000 | Msa0278330:three_prime_UTR | 25.0% |
| !!! | TTTTTTTGAAGGAATGAATG+TGG | + | chr2_3:11314074-11314093 | Msa0278330:intron | 25.0% |
| !!! | GAAAGTAGGTTTTTTAGTAT+TGG | + | chr2_3:11313981-11314000 | Msa0278330:three_prime_UTR | 25.0% |
| ! | ATGAATACAAGAGCAAAATA+TGG | - | chr2_3:11314186-11314205 | None:intergenic | 25.0% |
| ! | AGAAGAAGAATAGAAAATGT+AGG | + | chr2_3:11314299-11314318 | Msa0278330:three_prime_UTR | 25.0% |
| !! | TTTTTGTAACGGGAAATTCA+AGG | - | chr2_3:11309072-11309091 | None:intergenic | 30.0% |
| ! | ATCGTCTTCGATTTTTGTAA+CGG | - | chr2_3:11309083-11309102 | None:intergenic | 30.0% |
| TTGAAGAGTTTGAGAAGTAA+AGG | - | chr2_3:11309109-11309128 | None:intergenic | 30.0% | |
| !! | TGAATAAGACAAAGCATTGA+AGG | - | chr2_3:11309190-11309209 | None:intergenic | 30.0% |
| CATAAGATAATTGAGGAGTT+TGG | + | chr2_3:11309541-11309560 | Msa0278330:CDS | 30.0% | |
| TATCTCAAAACAATAGCGTT+TGG | - | chr2_3:11309967-11309986 | None:intergenic | 30.0% | |
| TCAAATAGTGGTTGTTATAG+TGG | + | chr2_3:11310014-11310033 | Msa0278330:intron | 30.0% | |
| GCTTGTGTGTTAATGTTAAT+AGG | + | chr2_3:11310171-11310190 | Msa0278330:intron | 30.0% | |
| ! | ACAGGTATATTACTAGTTTG+AGG | - | chr2_3:11310777-11310796 | None:intergenic | 30.0% |
| AAATATAGTAATGAACGCTG+CGG | - | chr2_3:11310813-11310832 | None:intergenic | 30.0% | |
| ! | TATATTTAAGGTCAACGTTG+TGG | + | chr2_3:11310826-11310845 | Msa0278330:intron | 30.0% |
| ACGATTCTATGTTCTTAGTT+AGG | - | chr2_3:11310934-11310953 | None:intergenic | 30.0% | |
| TGATATATTATGCAGTATCC+TGG | - | chr2_3:11311124-11311143 | None:intergenic | 30.0% | |
| AACATCATAGGATTTGAATG+AGG | - | chr2_3:11311250-11311269 | None:intergenic | 30.0% | |
| ! | GATTACTTTGGTAATCTTTC+AGG | + | chr2_3:11311505-11311524 | Msa0278330:intron | 30.0% |
| CAATTAATTTACTCACACGA+TGG | - | chr2_3:11311608-11311627 | None:intergenic | 30.0% | |
| GTGCAAAATAGAGCATATAT+AGG | - | chr2_3:11311706-11311725 | None:intergenic | 30.0% | |
| ! | GCATTCATATTAAGCTTTGA+TGG | - | chr2_3:11311751-11311770 | None:intergenic | 30.0% |
| ! | AGCTGAATTTTACCAATTTG+TGG | - | chr2_3:11311823-11311842 | None:intergenic | 30.0% |
| TGGGTAGAAAATTATATTCC+AGG | + | chr2_3:11311920-11311939 | Msa0278330:intron | 30.0% | |
| ACCCACAATTACAAAAATAG+AGG | + | chr2_3:11311978-11311997 | Msa0278330:intron | 30.0% | |
| !!! | CCCTCTATTTTTGTAATTGT+GGG | - | chr2_3:11311982-11312001 | None:intergenic | 30.0% |
| CCCACAATTACAAAAATAGA+GGG | + | chr2_3:11311979-11311998 | Msa0278330:intron | 30.0% | |
| CCACAATTACAAAAATAGAG+GGG | + | chr2_3:11311980-11311999 | Msa0278330:intron | 30.0% | |
| AATTACAAAAATAGAGGGGA+GGG | + | chr2_3:11311984-11312003 | Msa0278330:intron | 30.0% | |
| ! | TTATCATGTCTCCATTTTGA+TGG | - | chr2_3:11312088-11312107 | None:intergenic | 30.0% |
| ! | GTGCTATTGCTTCATTTAAT+GGG | - | chr2_3:11312187-11312206 | None:intergenic | 30.0% |
| ! | TGTGCTATTGCTTCATTTAA+TGG | - | chr2_3:11312188-11312207 | None:intergenic | 30.0% |
| CATTCTAAGCTAAGATATCA+TGG | - | chr2_3:11312332-11312351 | None:intergenic | 30.0% | |
| TGATATCTTAGCTTAGAATG+TGG | + | chr2_3:11312332-11312351 | Msa0278330:intron | 30.0% | |
| ATTATTTAAACATTGTCGCG+TGG | - | chr2_3:11312495-11312514 | None:intergenic | 30.0% | |
| TTAAACTATGTACTTTGGAC+TGG | - | chr2_3:11312534-11312553 | None:intergenic | 30.0% | |
| ATTCTTTGTTGGAGTTAGAA+GGG | + | chr2_3:11312717-11312736 | Msa0278330:intron | 30.0% | |
| TCAAACAACAGTCTTTACAA+AGG | - | chr2_3:11312766-11312785 | None:intergenic | 30.0% | |
| !!! | TTGTTGTTTTATTCACTAGC+TGG | + | chr2_3:11312804-11312823 | Msa0278330:intron | 30.0% |
| CATGATAAAGAAAGAAACAC+AGG | + | chr2_3:11312840-11312859 | Msa0278330:CDS | 30.0% | |
| CAGTTGTATTTGAACCAAAT+TGG | + | chr2_3:11313010-11313029 | Msa0278330:intron | 30.0% | |
| GTTGTATTTGAACCAAATTG+GGG | + | chr2_3:11313012-11313031 | Msa0278330:intron | 30.0% | |
| TTGTATTTGAACCAAATTGG+GGG | + | chr2_3:11313013-11313032 | Msa0278330:intron | 30.0% | |
| AATATGCATTCCACATTGAT+TGG | + | chr2_3:11313133-11313152 | Msa0278330:intron | 30.0% | |
| GATTGAAACACAAGATCAAT+GGG | - | chr2_3:11313213-11313232 | None:intergenic | 30.0% | |
| TGATTGAAACACAAGATCAA+TGG | - | chr2_3:11313214-11313233 | None:intergenic | 30.0% | |
| AAGCTTGCAATAAAAAGGAA+TGG | - | chr2_3:11313335-11313354 | None:intergenic | 30.0% | |
| ! | TTCCTTTTTATTGCAAGCTT+TGG | + | chr2_3:11313335-11313354 | Msa0278330:intron | 30.0% |
| AATATCCATGTTGCTAAGTT+TGG | - | chr2_3:11313517-11313536 | None:intergenic | 30.0% | |
| ! | ATTGGGAAAGATTTAAAACG+AGG | - | chr2_3:11313577-11313596 | None:intergenic | 30.0% |
| CTCAAAGTATAAAGAACATG+TGG | + | chr2_3:11313736-11313755 | Msa0278330:CDS | 30.0% | |
| AAAGTTTCAGAGATTAGAAG+CGG | + | chr2_3:11313764-11313783 | Msa0278330:CDS | 30.0% | |
| GAATGTGGTTAATTGAAAGT+AGG | + | chr2_3:11313967-11313986 | Msa0278330:three_prime_UTR | 30.0% | |
| GAATGTGGTTAATTGAAAGT+AGG | + | chr2_3:11313967-11313986 | Msa0278330:three_prime_UTR | 30.0% | |
| GCATCTTTACATCAAATTGA+TGG | - | chr2_3:11314215-11314234 | None:intergenic | 30.0% | |
| ! | TTTGAATTTTGTATCGGGAG+AGG | - | chr2_3:11308667-11308686 | None:intergenic | 35.0% |
| ! | TTGTTGTTGTTGAATGCAAC+GGG | - | chr2_3:11308699-11308718 | None:intergenic | 35.0% |
| !! | CTTGTTGTTGTTGAATGCAA+CGG | - | chr2_3:11308700-11308719 | None:intergenic | 35.0% |
| TTGCATTCAACAACAACAAG+AGG | + | chr2_3:11308700-11308719 | Msa0278330:five_prime_UTR | 35.0% | |
| TGCATTCAACAACAACAAGA+GGG | + | chr2_3:11308701-11308720 | Msa0278330:five_prime_UTR | 35.0% | |
| TCTTTGTAAAGGTCGAATGA+GGG | - | chr2_3:11308914-11308933 | None:intergenic | 35.0% | |
| GAGAAGATTTGAAAGAGATG+TGG | - | chr2_3:11308997-11309016 | None:intergenic | 35.0% | |
| ! | TCGTCTTCGATTTTTGTAAC+GGG | - | chr2_3:11309082-11309101 | None:intergenic | 35.0% |
| ! | CAATGCTTTGTCTTATTCAC+TGG | + | chr2_3:11309191-11309210 | Msa0278330:CDS | 35.0% |
| AAATTGCTGCTATAGTCTAG+CGG | + | chr2_3:11309933-11309952 | Msa0278330:intron | 35.0% | |
| ! | TTGCTGATAGCGTAAAATAG+AGG | - | chr2_3:11310076-11310095 | None:intergenic | 35.0% |
| GTTTCATTTCATGTGCTTCT+AGG | + | chr2_3:11310214-11310233 | Msa0278330:intron | 35.0% | |
| TGATGACATCAAGAGAAGTT+CGG | + | chr2_3:11310350-11310369 | Msa0278330:CDS | 35.0% | |
| GGATAGAGATTGATTATGTG+TGG | + | chr2_3:11310621-11310640 | Msa0278330:intron | 35.0% | |
| GGGTAATGTTGTTGAATTGA+TGG | + | chr2_3:11310703-11310722 | Msa0278330:intron | 35.0% | |
| AGTCAAACATAAATGAGACC+AGG | - | chr2_3:11310754-11310773 | None:intergenic | 35.0% | |
| AATCGTACTCACTCAACATT+AGG | + | chr2_3:11310948-11310967 | Msa0278330:intron | 35.0% | |
| GAAACACTTACATTGAAGCA+AGG | - | chr2_3:11311071-11311090 | None:intergenic | 35.0% | |
| ATTTGGAAGCAGTATTGTAC+AGG | - | chr2_3:11311186-11311205 | None:intergenic | 35.0% | |
| CATAGGATTTGAATGAGGAA+GGG | - | chr2_3:11311245-11311264 | None:intergenic | 35.0% | |
| TCATAGGATTTGAATGAGGA+AGG | - | chr2_3:11311246-11311265 | None:intergenic | 35.0% | |
| ! | AAGGGACAACTATGATTTGT+CGG | + | chr2_3:11311334-11311353 | Msa0278330:intron | 35.0% |
| ATAGCATACACCTTCTACAT+AGG | + | chr2_3:11311440-11311459 | Msa0278330:intron | 35.0% | |
| TAGCATACACCTTCTACATA+GGG | + | chr2_3:11311441-11311460 | Msa0278330:intron | 35.0% | |
| ! | TTATTTCTCCCCTATGTAGA+AGG | - | chr2_3:11311453-11311472 | None:intergenic | 35.0% |
| ! | ATTTTATTCCTGTGCAGGTA+TGG | - | chr2_3:11311477-11311496 | None:intergenic | 35.0% |
| ! | GAATGATTTTATTCCTGTGC+AGG | - | chr2_3:11311482-11311501 | None:intergenic | 35.0% |
| CTGCAGAATCAACATCTAAA+TGG | + | chr2_3:11311541-11311560 | Msa0278330:intron | 35.0% | |
| TAGTCAAACAGTAAGGATTG+TGG | + | chr2_3:11311578-11311597 | Msa0278330:intron | 35.0% | |
| ! | TAAGCTTTGATGGACAATGT+CGG | - | chr2_3:11311741-11311760 | None:intergenic | 35.0% |
| ATGTAAAACCCTACCTAAAC+TGG | + | chr2_3:11311844-11311863 | Msa0278330:intron | 35.0% | |
| TTACTACTCCAGTTTAGGTA+GGG | - | chr2_3:11311855-11311874 | None:intergenic | 35.0% | |
| TTTACTACTCCAGTTTAGGT+AGG | - | chr2_3:11311856-11311875 | None:intergenic | 35.0% | |
| ACAATGATATGTGCTTGGAA+TGG | - | chr2_3:11311948-11311967 | None:intergenic | 35.0% | |
| GTTCTACAATGATATGTGCT+TGG | - | chr2_3:11311953-11311972 | None:intergenic | 35.0% | |
| !!! | CCCCTCTATTTTTGTAATTG+TGG | - | chr2_3:11311983-11312002 | None:intergenic | 35.0% |
| CAATTACAAAAATAGAGGGG+AGG | + | chr2_3:11311983-11312002 | Msa0278330:intron | 35.0% | |
| ATTACAAAAATAGAGGGGAG+GGG | + | chr2_3:11311985-11312004 | Msa0278330:intron | 35.0% | |
| CATGATAAAGCTTCTACTTG+TGG | + | chr2_3:11312100-11312119 | Msa0278330:intron | 35.0% | |
| ! | TTCTCTGCAATTTGTTTAGG+TGG | - | chr2_3:11312158-11312177 | None:intergenic | 35.0% |
| ! | GTCTTCTCTGCAATTTGTTT+AGG | - | chr2_3:11312161-11312180 | None:intergenic | 35.0% |
| GCTAAGATATCATGGAAAGA+AGG | - | chr2_3:11312324-11312343 | None:intergenic | 35.0% | |
| GGGTAATGTTGTTGAATTGA+TGG | + | chr2_3:11310703-11310722 | Msa0278330:intron | 35.0% | |
| CATTCTTTGTTGGAGTTAGA+AGG | + | chr2_3:11312716-11312735 | Msa0278330:intron | 35.0% | |
| !! | GAGGTTCTAAAGGTAATATC+TGG | + | chr2_3:11312958-11312977 | Msa0278330:intron | 35.0% |
| TTGTGTTTCAATGAACTTGG+AGG | + | chr2_3:11313101-11313120 | Msa0278330:intron | 35.0% | |
| TGTGTTTCAATGAACTTGGA+GGG | + | chr2_3:11313102-11313121 | Msa0278330:intron | 35.0% | |
| AAACTAAACTGGCACGAAAT+TGG | - | chr2_3:11313159-11313178 | None:intergenic | 35.0% | |
| !!! | TTTCGTGCCAGTTTAGTTTT+TGG | + | chr2_3:11313160-11313179 | Msa0278330:intron | 35.0% |
| TATGCACTCATATTCTTGCA+CGG | - | chr2_3:11313257-11313276 | None:intergenic | 35.0% | |
| TACGAAAAACATGCTAGATG+TGG | - | chr2_3:11313301-11313320 | None:intergenic | 35.0% | |
| AGCCAAAGCTTGCAATAAAA+AGG | - | chr2_3:11313340-11313359 | None:intergenic | 35.0% | |
| CTGGGAATGTTGAAGATAAA+AGG | + | chr2_3:11313382-11313401 | Msa0278330:intron | 35.0% | |
| TGTAGTAACGAGTTAGTTCA+AGG | + | chr2_3:11313470-11313489 | Msa0278330:intron | 35.0% | |
| GTAGTAACGAGTTAGTTCAA+GGG | + | chr2_3:11313471-11313490 | Msa0278330:intron | 35.0% | |
| TGGAGATAGTTTAAGCTTGA+TGG | - | chr2_3:11313497-11313516 | None:intergenic | 35.0% | |
| TATCTCCAAACTTAGCAACA+TGG | + | chr2_3:11313509-11313528 | Msa0278330:intron | 35.0% | |
| GAAGAAATTCAAATGCATGC+CGG | + | chr2_3:11313686-11313705 | Msa0278330:CDS | 35.0% | |
| AAGTTTCAGAGATTAGAAGC+GGG | + | chr2_3:11313765-11313784 | Msa0278330:CDS | 35.0% | |
| TACGTGCATCATTAGATTGA+AGG | + | chr2_3:11314264-11314283 | Msa0278330:three_prime_UTR | 35.0% | |
| CTTTGTAAAGGTCGAATGAG+GGG | - | chr2_3:11308913-11308932 | None:intergenic | 40.0% | |
| GTCTTTGTAAAGGTCGAATG+AGG | - | chr2_3:11308915-11308934 | None:intergenic | 40.0% | |
| GATAGGAACGGTCTTTGTAA+AGG | - | chr2_3:11308925-11308944 | None:intergenic | 40.0% | |
| ! | TTGCGGATTGTTGATAGGAA+CGG | - | chr2_3:11308937-11308956 | None:intergenic | 40.0% |
| AGAGATGTGGAAATTGTGAG+AGG | - | chr2_3:11308984-11309003 | None:intergenic | 40.0% | |
| ! | GGTTTCGTGGATTTGTTTAG+CGG | - | chr2_3:11309029-11309048 | None:intergenic | 40.0% |
| TGAGGAAAATTAGGGTTTCG+TGG | - | chr2_3:11309042-11309061 | None:intergenic | 40.0% | |
| ! | GAGTTCGGTGAGGAAAATTA+GGG | - | chr2_3:11309050-11309069 | None:intergenic | 40.0% |
| AACGGGAAATTCAAGGAGTT+CGG | - | chr2_3:11309065-11309084 | None:intergenic | 40.0% | |
| ! | TTTTATTAGAGGCGATGACG+AGG | + | chr2_3:11309324-11309343 | Msa0278330:CDS | 40.0% |
| TGACGAGGCTATTCTTGATA+TGG | + | chr2_3:11309339-11309358 | Msa0278330:CDS | 40.0% | |
| TGAGCAAACTGTTGTTGAGT+TGG | + | chr2_3:11309426-11309445 | Msa0278330:CDS | 40.0% | |
| TCAAGCTCATCCTTCTTAGA+CGG | - | chr2_3:11309481-11309500 | None:intergenic | 40.0% | |
| GATGAGCTTGAGAAAGAGAA+GGG | + | chr2_3:11309490-11309509 | Msa0278330:CDS | 40.0% | |
| TAATTGAGGAGTTTGGGTCA+AGG | + | chr2_3:11309548-11309567 | Msa0278330:CDS | 40.0% | |
| ! | AGTTGCAGACTTTTAATGCG+AGG | + | chr2_3:11309680-11309699 | Msa0278330:CDS | 40.0% |
| ! | GTTGCAGACTTTTAATGCGA+GGG | + | chr2_3:11309681-11309700 | Msa0278330:CDS | 40.0% |
| GCATAAGATCAAAGACTTGG+AGG | + | chr2_3:11309816-11309835 | Msa0278330:CDS | 40.0% | |
| !!! | TGCTATAGTCTAGCGGATTT+TGG | + | chr2_3:11309940-11309959 | Msa0278330:intron | 40.0% |
| ! | TGTGCTTCTAGGTTGAAGAT+TGG | + | chr2_3:11310225-11310244 | Msa0278330:intron | 40.0% |
| TCAGTATGTGTTGAATCCCA+AGG | + | chr2_3:11310257-11310276 | Msa0278330:CDS | 40.0% | |
| CAGTATGTGTTGAATCCCAA+GGG | + | chr2_3:11310258-11310277 | Msa0278330:CDS | 40.0% | |
| TCAAAACCCATGATTTCAGC+AGG | - | chr2_3:11310291-11310310 | None:intergenic | 40.0% | |
| TCTCTTGATGTCATCAGCAT+AGG | - | chr2_3:11310346-11310365 | None:intergenic | 40.0% | |
| TGTGCTTGTGCTTTACATGA+AGG | + | chr2_3:11310535-11310554 | Msa0278330:intron | 40.0% | |
| TCTATCCAAACTCACTCTCT+CGG | - | chr2_3:11310608-11310627 | None:intergenic | 40.0% | |
| TTGATTATGTGTGGACAGTG+TGG | + | chr2_3:11310630-11310649 | Msa0278330:intron | 40.0% | |
| TTCCACATTCTAATTCCTGC+AGG | - | chr2_3:11310673-11310692 | None:intergenic | 40.0% | |
| CAGGTACAAGTTAGAAACAC+AGG | - | chr2_3:11310735-11310754 | None:intergenic | 40.0% | |
| ! | CTGTGTTTCTAACTTGTACC+TGG | + | chr2_3:11310733-11310752 | Msa0278330:intron | 40.0% |
| AATATACCTGTGCATCCGTA+TGG | + | chr2_3:11310786-11310805 | Msa0278330:intron | 40.0% | |
| ATATACCTGTGCATCCGTAT+GGG | + | chr2_3:11310787-11310806 | Msa0278330:intron | 40.0% | |
| ! | AGGGACAACTATGATTTGTC+GGG | + | chr2_3:11311335-11311354 | Msa0278330:intron | 40.0% |
| AGCATACACCTTCTACATAG+GGG | + | chr2_3:11311442-11311461 | Msa0278330:intron | 40.0% | |
| GAAATAAACCATACCTGCAC+AGG | + | chr2_3:11311466-11311485 | Msa0278330:intron | 40.0% | |
| CTGACATCACTTCCTGAAAT+AGG | + | chr2_3:11311671-11311690 | Msa0278330:intron | 40.0% | |
| ACAATGTCGGGCTTCTTATT+TGG | - | chr2_3:11311728-11311747 | None:intergenic | 40.0% | |
| ! | AAGCTTTGATGGACAATGTC+GGG | - | chr2_3:11311740-11311759 | None:intergenic | 40.0% |
| CTGTTGGTACACCATCAAAA+TGG | + | chr2_3:11312074-11312093 | Msa0278330:intron | 40.0% | |
| ! | TTCTAAGAACAGTTCACTGC+TGG | + | chr2_3:11312127-11312146 | Msa0278330:intron | 40.0% |
| GTGCAACAAGTAAGAAACAC+AGG | - | chr2_3:11312399-11312418 | None:intergenic | 40.0% | |
| TTGTCAGAAAAGGGAAGAGT+GGG | - | chr2_3:11312685-11312704 | None:intergenic | 40.0% | |
| ATTGTCAGAAAAGGGAAGAG+TGG | - | chr2_3:11312686-11312705 | None:intergenic | 40.0% | |
| TCACTAGCTGGAAACTCAAA+TGG | + | chr2_3:11312816-11312835 | Msa0278330:intron | 40.0% | |
| TGATCATGATGTGGGCATTA+TGG | + | chr2_3:11312921-11312940 | Msa0278330:CDS | 40.0% | |
| TTGAACCAAATTGGGGGAAA+AGG | + | chr2_3:11313019-11313038 | Msa0278330:intron | 40.0% | |
| ACGAAATTGGCCAATCAATG+TGG | - | chr2_3:11313146-11313165 | None:intergenic | 40.0% | |
| GAGCAAAATATGGAGCTGAA+TGG | - | chr2_3:11314176-11314195 | None:intergenic | 40.0% | |
| !! | GGAAGGTAGGAAGTGTCTTT+GGG | - | chr2_3:11308818-11308837 | None:intergenic | 45.0% |
| !! | TGGAAGGTAGGAAGTGTCTT+TGG | - | chr2_3:11308819-11308838 | None:intergenic | 45.0% |
| ! | TGCGATTGCGGATTGTTGAT+AGG | - | chr2_3:11308942-11308961 | None:intergenic | 45.0% |
| ATTTGTTTAGCGGAAGGGGA+AGG | - | chr2_3:11309019-11309038 | None:intergenic | 45.0% | |
| ! | GTGGATTTGTTTAGCGGAAG+GGG | - | chr2_3:11309023-11309042 | None:intergenic | 45.0% |
| ! | CGTGGATTTGTTTAGCGGAA+GGG | - | chr2_3:11309024-11309043 | None:intergenic | 45.0% |
| ! | TCGTGGATTTGTTTAGCGGA+AGG | - | chr2_3:11309025-11309044 | None:intergenic | 45.0% |
| ! | GGAGTTCGGTGAGGAAAATT+AGG | - | chr2_3:11309051-11309070 | None:intergenic | 45.0% |
| ! | GAAATTCAAGGAGTTCGGTG+AGG | - | chr2_3:11309060-11309079 | None:intergenic | 45.0% |
| ! | AGCATTGAAGGCCATTGATG+CGG | - | chr2_3:11309178-11309197 | None:intergenic | 45.0% |
| TCGACGAATTCGAGAGAGAT+AGG | - | chr2_3:11309240-11309259 | None:intergenic | 45.0% | |
| CGAGGCTATTCTTGATATGG+AGG | + | chr2_3:11309342-11309361 | Msa0278330:CDS | 45.0% | |
| TCATGAGAAGTCTGTTGCTG+AGG | + | chr2_3:11309387-11309406 | Msa0278330:CDS | 45.0% | |
| !! | GCAAACTGTTGTTGAGTTGG+AGG | + | chr2_3:11309429-11309448 | Msa0278330:CDS | 45.0% |
| GGATGAGCTTGAGAAAGAGA+AGG | + | chr2_3:11309489-11309508 | Msa0278330:CDS | 45.0% | |
| ! | TGAGAAAGAGAAGGGTGTGT+TGG | + | chr2_3:11309498-11309517 | Msa0278330:CDS | 45.0% |
| ! | AAAGAGAAGGGTGTGTTGGA+AGG | + | chr2_3:11309502-11309521 | Msa0278330:CDS | 45.0% |
| GGAGAATGAGAGGATTGTTG+AGG | + | chr2_3:11309630-11309649 | Msa0278330:CDS | 45.0% | |
| GAGGATTGTTGAGGAGAATG+AGG | + | chr2_3:11309639-11309658 | Msa0278330:CDS | 45.0% | |
| TGAGGAGCTTAAGACGAAAG+TGG | + | chr2_3:11309657-11309676 | Msa0278330:CDS | 45.0% | |
| ! | GACTTTTAATGCGAGGGATG+TGG | + | chr2_3:11309687-11309706 | Msa0278330:CDS | 45.0% |
| !! | GGAACTTGCTAGGAATGCTT+GGG | + | chr2_3:11309759-11309778 | Msa0278330:CDS | 45.0% |
| ! | ATGCTTGGGAGGAAAAGTGT+TGG | + | chr2_3:11309773-11309792 | Msa0278330:CDS | 45.0% |
| !! | TGCTTGGGAGGAAAAGTGTT+GGG | + | chr2_3:11309774-11309793 | Msa0278330:CDS | 45.0% |
| CGCGCATAAGATCAAAGACT+TGG | + | chr2_3:11309813-11309832 | Msa0278330:CDS | 45.0% | |
| TCTCTCCATAGATTGCAACC+AGG | + | chr2_3:11309840-11309859 | Msa0278330:CDS | 45.0% | |
| AAAAAAACCTCCTAAGGGCC+TGG | - | chr2_3:11309861-11309880 | None:intergenic | 45.0% | |
| CTAGTCAAGTGTGCACTGTT+TGG | + | chr2_3:11310118-11310137 | Msa0278330:intron | 45.0% | |
| TCAGCATAGGATTCAAGCAC+AGG | - | chr2_3:11310333-11310352 | None:intergenic | 45.0% | |
| TGACATCAAGAGAAGTTCGG+TGG | + | chr2_3:11310353-11310372 | Msa0278330:CDS | 45.0% | |
| ! | GAGAAGTTCGGTGGTGAAAT+TGG | + | chr2_3:11310362-11310381 | Msa0278330:CDS | 45.0% |
| GGTGGTGAAATTGGAAGAGT+TGG | + | chr2_3:11310371-11310390 | Msa0278330:CDS | 45.0% | |
| !! | TTCGGCGGACTTTTTCTGAA+GGG | - | chr2_3:11310400-11310419 | None:intergenic | 45.0% |
| !! | TTTCGGCGGACTTTTTCTGA+AGG | - | chr2_3:11310401-11310420 | None:intergenic | 45.0% |
| ATGTACCGAGAGAGTGAGTT+TGG | + | chr2_3:11310600-11310619 | Msa0278330:intron | 45.0% | |
| TAGAATGTGGAAGCTGATGC+AGG | + | chr2_3:11310681-11310700 | Msa0278330:intron | 45.0% | |
| AGAATGTGGAAGCTGATGCA+GGG | + | chr2_3:11310682-11310701 | Msa0278330:intron | 45.0% | |
| ! | GGGACAACTATGATTTGTCG+GGG | + | chr2_3:11311336-11311355 | Msa0278330:intron | 45.0% |
| ! | GGACAACTATGATTTGTCGG+GGG | + | chr2_3:11311337-11311356 | Msa0278330:intron | 45.0% |
| ! | AACTATGATTTGTCGGGGGT+AGG | + | chr2_3:11311341-11311360 | Msa0278330:intron | 45.0% |
| ! | ACTATGATTTGTCGGGGGTA+GGG | + | chr2_3:11311342-11311361 | Msa0278330:intron | 45.0% |
| CACTTCCTGAAATAGGCTTC+TGG | + | chr2_3:11311678-11311697 | Msa0278330:intron | 45.0% | |
| AGGATCCAGAAGCCTATTTC+AGG | - | chr2_3:11311686-11311705 | None:intergenic | 45.0% | |
| TATGTGCTTGGAATGGTTCC+TGG | - | chr2_3:11311941-11311960 | None:intergenic | 45.0% | |
| CTGAATCATTGTAGGTGTGC+TGG | - | chr2_3:11312222-11312241 | None:intergenic | 45.0% | |
| TGCCGAAGCTAAGAAGATGT+CGG | + | chr2_3:11312882-11312901 | Msa0278330:CDS | 45.0% | |
| GTCCGACATCTTCTTAGCTT+CGG | - | chr2_3:11312887-11312906 | None:intergenic | 45.0% | |
| CAGCTAGCTGATCATGATGT+GGG | + | chr2_3:11312913-11312932 | Msa0278330:CDS | 45.0% | |
| TGTGGGCATTATGGAAAGAG+AGG | + | chr2_3:11312930-11312949 | Msa0278330:CDS | 45.0% | |
| TGGGTAGCAACTAGCATCTT+AGG | - | chr2_3:11313194-11313213 | None:intergenic | 45.0% | |
| !! | TAAATAAAATGATATTAAAA+TGG | + | chr2_3:11311872-11311891 | Msa0278330:intron | 5.0% |
| !! | AAATAAAATGATATTAAAAT+GGG | + | chr2_3:11311873-11311892 | Msa0278330:intron | 5.0% |
| !! | AAAATTAAAATACTATTAAA+AGG | + | chr2_3:11312623-11312642 | Msa0278330:intron | 5.0% |
| !!! | GGTGGGTTGTCTCATTTTCG+GGG | - | chr2_3:11308777-11308796 | None:intergenic | 50.0% |
| !!! | CGGTGGGTTGTCTCATTTTC+GGG | - | chr2_3:11308778-11308797 | None:intergenic | 50.0% |
| !!! | GCGGTGGGTTGTCTCATTTT+CGG | - | chr2_3:11308779-11308798 | None:intergenic | 50.0% |
| !! | AAGTGTCTTTGGGTTGGCGA+CGG | - | chr2_3:11308808-11308827 | None:intergenic | 50.0% |
| !! | GGTAGGAAGTGTCTTTGGGT+TGG | - | chr2_3:11308814-11308833 | None:intergenic | 50.0% |
| !! | GGAGTTGATGGTTGCGATTG+CGG | - | chr2_3:11308954-11308973 | None:intergenic | 50.0% |
| GAAATTGTGAGAGGCGAGGA+AGG | - | chr2_3:11308975-11308994 | None:intergenic | 50.0% | |
| TGTGGAAATTGTGAGAGGCG+AGG | - | chr2_3:11308979-11308998 | None:intergenic | 50.0% | |
| CATTGAAGGCCATTGATGCG+GGG | - | chr2_3:11309176-11309195 | None:intergenic | 50.0% | |
| GCATTGAAGGCCATTGATGC+GGG | - | chr2_3:11309177-11309196 | None:intergenic | 50.0% | |
| GTCTGTTGCTGAGGAGAAAC+TGG | + | chr2_3:11309396-11309415 | Msa0278330:CDS | 50.0% | |
| !! | TGTTGAGTTGGAGGCGCAAT+TGG | + | chr2_3:11309438-11309457 | Msa0278330:CDS | 50.0% |
| AAGGATTGAGCCGTTGGAGA+GGG | + | chr2_3:11309567-11309586 | Msa0278330:CDS | 50.0% | |
| GGAGAAGGAGAAGCAATTGG+AGG | + | chr2_3:11309597-11309616 | Msa0278330:CDS | 50.0% | |
| TTAATGCGAGGGATGTGGAG+AGG | + | chr2_3:11309692-11309711 | Msa0278330:CDS | 50.0% | |
| GGATGTGGAGAGGATGAAGA+AGG | + | chr2_3:11309702-11309721 | Msa0278330:CDS | 50.0% | |
| !! | CGGAACTTGCTAGGAATGCT+TGG | + | chr2_3:11309758-11309777 | Msa0278330:CDS | 50.0% |
| ! | ACTTGCTAGGAATGCTTGGG+AGG | + | chr2_3:11309762-11309781 | Msa0278330:CDS | 50.0% |
| AAGGGCCTGGTTGCAATCTA+TGG | - | chr2_3:11309848-11309867 | None:intergenic | 50.0% | |
| TAGATTGCAACCAGGCCCTT+AGG | + | chr2_3:11309848-11309867 | Msa0278330:CDS | 50.0% | |
| AACCACGCCTGCTGAAATCA+TGG | + | chr2_3:11310281-11310300 | Msa0278330:CDS | 50.0% | |
| ACCACGCCTGCTGAAATCAT+GGG | + | chr2_3:11310282-11310301 | Msa0278330:CDS | 50.0% | |
| ! | CTCGAGCCTAGCAGCATTTT+CGG | - | chr2_3:11310418-11310437 | None:intergenic | 50.0% |
| GAAAATGCTGCTAGGCTCGA+GGG | + | chr2_3:11310417-11310436 | Msa0278330:CDS | 50.0% | |
| AAAATGCTGCTAGGCTCGAG+GGG | + | chr2_3:11310418-11310437 | Msa0278330:CDS | 50.0% | |
| TGGACAGTGTGGTATCAGAG+TGG | + | chr2_3:11310641-11310660 | Msa0278330:intron | 50.0% | |
| GGCCTGCAGGAATTAGAATG+TGG | + | chr2_3:11310668-11310687 | Msa0278330:intron | 50.0% | |
| GAATGTGGAAGCTGATGCAG+GGG | + | chr2_3:11310683-11310702 | Msa0278330:intron | 50.0% | |
| ! | CTATGATTTGTCGGGGGTAG+GGG | + | chr2_3:11311343-11311362 | Msa0278330:intron | 50.0% |
| ! | TATGATTTGTCGGGGGTAGG+GGG | + | chr2_3:11311344-11311363 | Msa0278330:intron | 50.0% |
| TAGAATGTGGAAGCTGACGC+AGG | + | chr2_3:11312345-11312364 | Msa0278330:intron | 50.0% | |
| AGAATGTGGAAGCTGACGCA+GGG | + | chr2_3:11312346-11312365 | Msa0278330:intron | 50.0% | |
| GGAGTCAGAGGACAAGTACA+AGG | - | chr2_3:11312474-11312493 | None:intergenic | 50.0% | |
| CCACATCATGATCAGCTAGC+TGG | - | chr2_3:11312915-11312934 | None:intergenic | 50.0% | |
| CCAGCTAGCTGATCATGATG+TGG | + | chr2_3:11312912-11312931 | Msa0278330:CDS | 50.0% | |
| TATGGAAAGAGAGGCAGCTG+AGG | + | chr2_3:11312939-11312958 | Msa0278330:CDS | 50.0% | |
| ! | AGAGGCAGCTGAGGTTCTAA+AGG | + | chr2_3:11312948-11312967 | Msa0278330:CDS | 50.0% |
| ! | CATCGCCTTTTCCCCCAATT+TGG | - | chr2_3:11313027-11313046 | None:intergenic | 50.0% |
| CAAATTGGGGGAAAAGGCGA+TGG | + | chr2_3:11313025-11313044 | Msa0278330:intron | 50.0% | |
| CGAGACTGATGTCGGAATCG+CGG | - | chr2_3:11308862-11308881 | None:intergenic | 55.0% | |
| GCTGCTGACGAGACTGATGT+CGG | - | chr2_3:11308870-11308889 | None:intergenic | 55.0% | |
| GTCGAATGAGGGGATTCCGA+CGG | - | chr2_3:11308903-11308922 | None:intergenic | 55.0% | |
| AGAGGCGAGGAAGGAGTTGA+TGG | - | chr2_3:11308966-11308985 | None:intergenic | 55.0% | |
| ! | TGAGTTGGAGGCGCAATTGG+AGG | + | chr2_3:11309441-11309460 | Msa0278330:CDS | 55.0% |
| CTCATCCTTCTTAGACGGCG+CGG | - | chr2_3:11309476-11309495 | None:intergenic | 55.0% | |
| TGGGTCAAGGATTGAGCCGT+TGG | + | chr2_3:11309561-11309580 | Msa0278330:CDS | 55.0% | |
| CAAGGATTGAGCCGTTGGAG+AGG | + | chr2_3:11309566-11309585 | Msa0278330:CDS | 55.0% | |
| ! | TGAGCCGTTGGAGAGGGTTT+TGG | + | chr2_3:11309573-11309592 | Msa0278330:CDS | 55.0% |
| TCCGCCAAAACCCTCTCCAA+CGG | - | chr2_3:11309580-11309599 | None:intergenic | 55.0% | |
| GGCGGAGAAGGAGAAGCAAT+TGG | + | chr2_3:11309594-11309613 | Msa0278330:CDS | 55.0% | |
| GGAGAAGCAATTGGAGGCGA+AGG | + | chr2_3:11309603-11309622 | Msa0278330:CDS | 55.0% | |
| GAAGCAATTGGAGGCGAAGG+TGG | + | chr2_3:11309606-11309625 | Msa0278330:CDS | 55.0% | |
| !! | CGAAGGTGGTGGAGAATGAG+AGG | + | chr2_3:11309620-11309639 | Msa0278330:CDS | 55.0% |
| AGGAGTTGCACGCTGTTGAG+AGG | + | chr2_3:11309722-11309741 | Msa0278330:CDS | 55.0% | |
| GGAGTTGCACGCTGTTGAGA+GGG | + | chr2_3:11309723-11309742 | Msa0278330:CDS | 55.0% | |
| TGTTGAGAGGGATGCTGGTG+AGG | + | chr2_3:11309735-11309754 | Msa0278330:CDS | 55.0% | |
| ATTGCAACCAGGCCCTTAGG+AGG | + | chr2_3:11309851-11309870 | Msa0278330:CDS | 55.0% | |
| ACCCATGATTTCAGCAGGCG+TGG | - | chr2_3:11310286-11310305 | None:intergenic | 55.0% | |
| AGTCCGCCGAAAATGCTGCT+AGG | + | chr2_3:11310409-11310428 | Msa0278330:CDS | 55.0% | |
| ! | GAGCCTAGCAGCATTTTCGG+CGG | - | chr2_3:11310415-11310434 | None:intergenic | 55.0% |
| CGAAAATGCTGCTAGGCTCG+AGG | + | chr2_3:11310416-11310435 | Msa0278330:CDS | 55.0% | |
| GTGTGGTATCAGAGTGGTGC+TGG | + | chr2_3:11310647-11310666 | Msa0278330:intron | 55.0% | |
| AATGAACGCTGCGGCCCATA+CGG | - | chr2_3:11310804-11310823 | None:intergenic | 55.0% | |
| GAATGTGGAAGCTGACGCAG+GGG | + | chr2_3:11312347-11312366 | Msa0278330:intron | 55.0% | |
| ACATTGTCGCGTGGAGTCAG+AGG | - | chr2_3:11312486-11312505 | None:intergenic | 55.0% | |
| !! | GTCTTTGGGTTGGCGACGGT+GGG | - | chr2_3:11308804-11308823 | None:intergenic | 60.0% |
| !! | TGTCTTTGGGTTGGCGACGG+TGG | - | chr2_3:11308805-11308824 | None:intergenic | 60.0% |
| !! | AGGGGTTGGTGGTGGAAGGT+AGG | - | chr2_3:11308831-11308850 | None:intergenic | 60.0% |
| !! | TGAGAGGGGTTGGTGGTGGA+AGG | - | chr2_3:11308835-11308854 | None:intergenic | 60.0% |
| !! | TGGTTGAGAGGGGTTGGTGG+TGG | - | chr2_3:11308839-11308858 | None:intergenic | 60.0% |
| GGAATCGCGGTGGTTGAGAG+GGG | - | chr2_3:11308849-11308868 | None:intergenic | 60.0% | |
| CGGAATCGCGGTGGTTGAGA+GGG | - | chr2_3:11308850-11308869 | None:intergenic | 60.0% | |
| TCGGAATCGCGGTGGTTGAG+AGG | - | chr2_3:11308851-11308870 | None:intergenic | 60.0% | |
| GACTGATGTCGGAATCGCGG+TGG | - | chr2_3:11308859-11308878 | None:intergenic | 60.0% | |
| AGGGGATTCCGACGGAGGAA+GGG | - | chr2_3:11308895-11308914 | None:intergenic | 60.0% | |
| GAATGAGGGGATTCCGACGG+AGG | - | chr2_3:11308900-11308919 | None:intergenic | 60.0% | |
| ACCCTGCTACCCCGCATCAA+TGG | + | chr2_3:11309164-11309183 | Msa0278330:CDS | 60.0% | |
| GCCATTGATGCGGGGTAGCA+GGG | - | chr2_3:11309168-11309187 | None:intergenic | 60.0% | |
| ! | GTTGGAGGCGCAATTGGAGG+AGG | + | chr2_3:11309444-11309463 | Msa0278330:CDS | 60.0% |
| GAGATCCGCGCCGTCTAAGA+AGG | + | chr2_3:11309468-11309487 | Msa0278330:CDS | 60.0% | |
| !! | GCCGTTGGAGAGGGTTTTGG+CGG | + | chr2_3:11309576-11309595 | Msa0278330:CDS | 60.0% |
| !! | GGAGAGGGTTTTGGCGGAGA+AGG | + | chr2_3:11309582-11309601 | Msa0278330:CDS | 60.0% |
| GCAATTGGAGGCGAAGGTGG+TGG | + | chr2_3:11309609-11309628 | Msa0278330:CDS | 60.0% | |
| CACGCTGTTGAGAGGGATGC+TGG | + | chr2_3:11309730-11309749 | Msa0278330:CDS | 60.0% | |
| TGAGAGGGATGCTGGTGAGG+CGG | + | chr2_3:11309738-11309757 | Msa0278330:CDS | 60.0% | |
| ! | CTGGTGAGGCGGAACTTGCT+AGG | + | chr2_3:11309749-11309768 | Msa0278330:CDS | 60.0% |
| TCAGCAGGCGTGGTTCCCTT+GGG | - | chr2_3:11310276-11310295 | None:intergenic | 60.0% | |
| TTCAGCAGGCGTGGTTCCCT+TGG | - | chr2_3:11310277-11310296 | None:intergenic | 60.0% | |
| !! | TTTGGGTTGGCGACGGTGGG+TGG | - | chr2_3:11308801-11308820 | None:intergenic | 65.0% |
| CGGTGGTTGAGAGGGGTTGG+TGG | - | chr2_3:11308842-11308861 | None:intergenic | 65.0% | |
| TCGCGGTGGTTGAGAGGGGT+TGG | - | chr2_3:11308845-11308864 | None:intergenic | 65.0% | |
| GGATTCCGACGGAGGAAGGG+CGG | - | chr2_3:11308892-11308911 | None:intergenic | 65.0% | |
| GAGGGGATTCCGACGGAGGA+AGG | - | chr2_3:11308896-11308915 | None:intergenic | 65.0% | |
| GGCCATTGATGCGGGGTAGC+AGG | - | chr2_3:11309169-11309188 | None:intergenic | 65.0% | |
| !! | TCAGAGTGGTGCTGGCCTGC+AGG | + | chr2_3:11310655-11310674 | Msa0278330:intron | 65.0% |
| TGCGGCCCATACGGATGCAC+AGG | - | chr2_3:11310795-11310814 | None:intergenic | 65.0% | |
| AGCAGCCGCCCTTCCTCCGT+CGG | + | chr2_3:11308884-11308903 | Msa0278330:CDS | 70.0% | |
| ! | TGGCGACGGTGGGTGGCGGT+GGG | - | chr2_3:11308794-11308813 | None:intergenic | 75.0% |
| ! | TTGGCGACGGTGGGTGGCGG+TGG | - | chr2_3:11308795-11308814 | None:intergenic | 75.0% |
| ! | GGGTTGGCGACGGTGGGTGG+CGG | - | chr2_3:11308798-11308817 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 11308660 | 11314361 | 11308660 | ID=Msa0278330;Name=Msa0278330 |
| chr2_3 | mRNA | 11308660 | 11314361 | 11308660 | ID=Msa0278330-mRNA-1;Parent=Msa0278330;Name=Msa0278330-mRNA-1;_AED=0.01;_eAED=0.01;_QI=122|1|1|1|0.75|0.6|5|438|577 |
| chr2_3 | exon | 11308660 | 11309872 | 11308660 | ID=Msa0278330-mRNA-1:exon:5081;Parent=Msa0278330-mRNA-1 |
| chr2_3 | exon | 11310236 | 11310482 | 11310236 | ID=Msa0278330-mRNA-1:exon:5082;Parent=Msa0278330-mRNA-1 |
| chr2_3 | exon | 11312823 | 11312969 | 11312823 | ID=Msa0278330-mRNA-1:exon:5083;Parent=Msa0278330-mRNA-1 |
| chr2_3 | exon | 11313644 | 11314053 | 11313644 | ID=Msa0278330-mRNA-1:exon:5084;Parent=Msa0278330-mRNA-1 |
| chr2_3 | exon | 11314085 | 11314361 | 11314085 | ID=Msa0278330-mRNA-1:exon:5085;Parent=Msa0278330-mRNA-1 |
| chr2_3 | five_prime_UTR | 11308660 | 11308781 | 11308660 | ID=Msa0278330-mRNA-1:five_prime_utr;Parent=Msa0278330-mRNA-1 |
| chr2_3 | CDS | 11308782 | 11309872 | 11308782 | ID=Msa0278330-mRNA-1:cds;Parent=Msa0278330-mRNA-1 |
| chr2_3 | CDS | 11310236 | 11310482 | 11310236 | ID=Msa0278330-mRNA-1:cds;Parent=Msa0278330-mRNA-1 |
| chr2_3 | CDS | 11312823 | 11312969 | 11312823 | ID=Msa0278330-mRNA-1:cds;Parent=Msa0278330-mRNA-1 |
| chr2_3 | CDS | 11313644 | 11313892 | 11313644 | ID=Msa0278330-mRNA-1:cds;Parent=Msa0278330-mRNA-1 |
| chr2_3 | three_prime_UTR | 11313893 | 11314053 | 11313893 | ID=Msa0278330-mRNA-1:three_prime_utr;Parent=Msa0278330-mRNA-1 |
| chr2_3 | three_prime_UTR | 11314085 | 11314361 | 11314085 | ID=Msa0278330-mRNA-1:three_prime_utr;Parent=Msa0278330-mRNA-1 |
| Gene Sequence |
| Protein sequence |
