Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0328150 | XP_003594432.1 | 95.667 | 577 | 23 | 1 | 1 | 577 | 1 | 575 | 0.0 | 1105 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0328150 | sp|Q9M1G5|NDC80_ARATH | 45.725 | 538 | 282 | 5 | 24 | 559 | 33 | 562 | 2.63e-163 | 480 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0198130 | Msa0328150 | 0.924433 | 7.095850e-90 | -8.615850e-47 |
| Msa0198230 | Msa0328150 | 0.909174 | 7.620099e-82 | -8.615850e-47 |
| Msa0237210 | Msa0328150 | 0.810561 | 1.084096e-50 | -8.615850e-47 |
| Msa0278330 | Msa0328150 | 0.956699 | 1.592408e-114 | -8.615850e-47 |
| Msa0278350 | Msa0328150 | 0.922732 | 6.700951e-89 | -8.615850e-47 |
| Msa0278370 | Msa0328150 | 0.977551 | 5.227439e-144 | -8.615850e-47 |
| Msa0278450 | Msa0328150 | 0.946404 | 4.926287e-105 | -8.615850e-47 |
| Msa0315690 | Msa0328150 | 0.801298 | 9.618448e-49 | -8.615850e-47 |
| Msa0328080 | Msa0328150 | 0.894634 | 2.050871e-75 | -8.615850e-47 |
| Msa0328150 | Msa0361910 | 0.806067 | 9.848398e-50 | -8.615850e-47 |
| Msa0328150 | Msa0483100 | 0.840283 | 9.543491e-58 | -8.615850e-47 |
| Msa0328150 | Msa0534720 | 0.838742 | 2.400672e-57 | -8.615850e-47 |
| Msa0328150 | Msa1170350 | 0.921521 | 3.217026e-88 | -8.615850e-47 |
| Msa0328150 | Msa1320670 | 0.846128 | 2.638684e-59 | -8.615850e-47 |
| Msa0328150 | Msa1392580 | 0.812982 | 3.222901e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0328150 | MtrunA17_Chr2g0291491 | 95.667 | 577 | 23 | 1 | 1 | 577 | 1 | 575 | 0.0 | 1105 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0328150 | AT3G54630.1 | 45.725 | 538 | 282 | 5 | 24 | 559 | 33 | 562 | 2.68e-164 | 480 |
Find 165 sgRNAs with CRISPR-Local
Find 396 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATAACAATAATATTCTATT+TGG | 0.158248 | 2_4:-40310309 | Msa0328150:CDS |
| ATTGATTTATTAAGTTTAAA+AGG | 0.160827 | 2_4:+40310453 | None:intergenic |
| CTATGTTATGTATACAAAAT+AGG | 0.178307 | 2_4:-40305243 | None:intergenic |
| GGAGTTCGGTGAGGAAAATT+AGG | 0.203771 | 2_4:+40310538 | None:intergenic |
| TGGAAGGTAGGAAGTGTCTT+TGG | 0.259688 | 2_4:+40310770 | None:intergenic |
| CATAAGATAATTGAGGAGTT+TGG | 0.260608 | 2_4:-40310045 | Msa0328150:CDS |
| TTGGCGACGGTGGGTGGCGG+TGG | 0.276135 | 2_4:+40310794 | None:intergenic |
| GAGAAGTTCGGTGGTGAAAT+TGG | 0.292249 | 2_4:-40309224 | Msa0328150:CDS |
| TGAGCCGTTGGAGAGGGTTT+TGG | 0.311584 | 2_4:-40310013 | Msa0328150:CDS |
| AAGGGCCTGGTTGCAATCTA+TGG | 0.332441 | 2_4:+40309741 | None:intergenic |
| ATAAGATAATTGAGGAGTTT+GGG | 0.338703 | 2_4:-40310044 | Msa0328150:CDS |
| TTCAGCAGGCGTGGTTCCCT+TGG | 0.339122 | 2_4:+40309312 | None:intergenic |
| ATGAATACAAGAGCAAAATA+TGG | 0.344269 | 2_4:+40305401 | None:intergenic |
| GGAAGGTAGGAAGTGTCTTT+GGG | 0.347036 | 2_4:+40310771 | None:intergenic |
| GGCCATTGATGCGGGGTAGC+AGG | 0.360117 | 2_4:+40310420 | None:intergenic |
| CAATGCTTTGTCTTATTCAC+TGG | 0.360486 | 2_4:-40310395 | Msa0328150:CDS |
| TGATCATGATGTGGGCATTA+TGG | 0.365375 | 2_4:-40306663 | Msa0328150:CDS |
| GTCTGTTGCTGAGGAGAAAC+TGG | 0.366375 | 2_4:-40310190 | Msa0328150:CDS |
| TATGTTATGTATACAAAATA+GGG | 0.372003 | 2_4:-40305242 | None:intergenic |
| TGACGAGGCTATTCTTGATA+TGG | 0.379772 | 2_4:-40310247 | Msa0328150:CDS |
| GTCTTTGGGTTGGCGACGGT+GGG | 0.391931 | 2_4:+40310785 | None:intergenic |
| GAGTTCGGTGAGGAAAATTA+GGG | 0.399786 | 2_4:+40310539 | None:intergenic |
| TGGTTGAGAGGGGTTGGTGG+TGG | 0.400749 | 2_4:+40310750 | None:intergenic |
| GTCCGACATCTTCTTAGCTT+CGG | 0.401875 | 2_4:+40306700 | None:intergenic |
| GCATCTTTACATCAAATTGA+TGG | 0.403182 | 2_4:+40305372 | None:intergenic |
| GGCATCTGAATTGAAGTTGC+AGG | 0.406818 | 2_4:-40305941 | Msa0328150:CDS |
| TTGAAGAGTTTGAGAAGTAA+AGG | 0.409288 | 2_4:+40310480 | None:intergenic |
| GGGTTGGCGACGGTGGGTGG+CGG | 0.420965 | 2_4:+40310791 | None:intergenic |
| TGAATAAGACAAAGCATTGA+AGG | 0.425794 | 2_4:+40310399 | None:intergenic |
| TGTTGAGTTGGAGGCGCAAT+TGG | 0.435358 | 2_4:-40310148 | Msa0328150:CDS |
| TCACTAGCTGGAAACTCAAA+TGG | 0.437352 | 2_4:-40306768 | Msa0328150:intron |
| CGGAACTTGCTAGGAATGCT+TGG | 0.439222 | 2_4:-40309828 | Msa0328150:CDS |
| AGGGGTTGGTGGTGGAAGGT+AGG | 0.444653 | 2_4:+40310758 | None:intergenic |
| TGAGAAAGAGAAGGGTGTGT+TGG | 0.446077 | 2_4:-40310088 | Msa0328150:CDS |
| TTGATTTATTAAGTTTAAAA+GGG | 0.447323 | 2_4:+40310454 | None:intergenic |
| TGCGATTGCGGATTGTTGAT+AGG | 0.448386 | 2_4:+40310647 | None:intergenic |
| GAAATTGTGAGAGGCGAGGA+AGG | 0.448991 | 2_4:+40310614 | None:intergenic |
| AACCACGCCTGCTGAAATCA+TGG | 0.451028 | 2_4:-40309305 | Msa0328150:CDS |
| TAGATTGCAACCAGGCCCTT+AGG | 0.451842 | 2_4:-40309738 | Msa0328150:CDS |
| TACGTGCATCATTAGATTGA+AGG | 0.458764 | 2_4:-40305320 | Msa0328150:three_prime_UTR |
| TGAGAGGGGTTGGTGGTGGA+AGG | 0.460898 | 2_4:+40310754 | None:intergenic |
| GAATGTGGTTAATTGAAAGT+AGG | 0.462877 | 2_4:-40305495 | Msa0328150:three_prime_UTR |
| GAATGTGGTTAATTGAAAGT+AGG | 0.462877 | 2_4:-40305617 | Msa0328150:three_prime_UTR |
| TGTGCTTCTAGGTTGAAGAT+TGG | 0.463038 | 2_4:-40309361 | Msa0328150:intron |
| GGCGGAGAAGGAGAAGCAAT+TGG | 0.464127 | 2_4:-40309992 | Msa0328150:CDS |
| TCAGCAGGCGTGGTTCCCTT+GGG | 0.464966 | 2_4:+40309313 | None:intergenic |
| AACGGGAAATTCAAGGAGTT+CGG | 0.466119 | 2_4:+40310524 | None:intergenic |
| AGAGGCAGCTGAGGTTCTAA+AGG | 0.469279 | 2_4:-40306636 | Msa0328150:intron |
| ACCCTGCTACCCCGCATCAA+TGG | 0.472909 | 2_4:-40310422 | Msa0328150:CDS |
| CGCGCATAAGATCAAAGACT+TGG | 0.473475 | 2_4:-40309773 | Msa0328150:CDS |
| TGTCTTTGGGTTGGCGACGG+TGG | 0.473790 | 2_4:+40310784 | None:intergenic |
| AGAGGCGAGGAAGGAGTTGA+TGG | 0.475835 | 2_4:+40310623 | None:intergenic |
| GAGGGGATTCCGACGGAGGA+AGG | 0.476947 | 2_4:+40310693 | None:intergenic |
| TGAGGAAAATTAGGGTTTCG+TGG | 0.477520 | 2_4:+40310547 | None:intergenic |
| TCGCGGTGGTTGAGAGGGGT+TGG | 0.479818 | 2_4:+40310744 | None:intergenic |
| TCGACGAATTCGAGAGAGAT+AGG | 0.483008 | 2_4:+40310349 | None:intergenic |
| TGCTTGGGAGGAAAAGTGTT+GGG | 0.483018 | 2_4:-40309812 | Msa0328150:CDS |
| GCATTGAAGGCCATTGATGC+GGG | 0.484798 | 2_4:+40310412 | None:intergenic |
| TGGCGACGGTGGGTGGCGGT+GGG | 0.488231 | 2_4:+40310795 | None:intergenic |
| GGTGGTGAAATTGGAAGAGT+TGG | 0.490182 | 2_4:-40309215 | Msa0328150:CDS |
| CGGAATCGCGGTGGTTGAGA+GGG | 0.491653 | 2_4:+40310739 | None:intergenic |
| CGGTGGTTGAGAGGGGTTGG+TGG | 0.491912 | 2_4:+40310747 | None:intergenic |
| TTTGGGTTGGCGACGGTGGG+TGG | 0.492725 | 2_4:+40310788 | None:intergenic |
| TTGTTGTTGTTGAATGCAAC+GGG | 0.498103 | 2_4:+40310891 | Msa0328160:CDS |
| GGATGTGGAGAGGATGAAGA+AGG | 0.500189 | 2_4:-40309884 | Msa0328150:CDS |
| TGGGTCAAGGATTGAGCCGT+TGG | 0.504005 | 2_4:-40310025 | Msa0328150:CDS |
| TCGTGGATTTGTTTAGCGGA+AGG | 0.505891 | 2_4:+40310564 | None:intergenic |
| GGAGAAGCAATTGGAGGCGA+AGG | 0.507967 | 2_4:-40309983 | Msa0328150:CDS |
| GCAATTGGAGGCGAAGGTGG+TGG | 0.508621 | 2_4:-40309977 | Msa0328150:CDS |
| GCAAACTGTTGTTGAGTTGG+AGG | 0.509033 | 2_4:-40310157 | Msa0328150:CDS |
| GAGATCCGCGCCGTCTAAGA+AGG | 0.509647 | 2_4:-40310118 | Msa0328150:CDS |
| TCAAGCTCATCCTTCTTAGA+CGG | 0.509935 | 2_4:+40310108 | None:intergenic |
| CTGGTGAGGCGGAACTTGCT+AGG | 0.511152 | 2_4:-40309837 | Msa0328150:CDS |
| GAGGATTGTTGAGGAGAATG+AGG | 0.511952 | 2_4:-40309947 | Msa0328150:CDS |
| CACGCTGTTGAGAGGGATGC+TGG | 0.512009 | 2_4:-40309856 | Msa0328150:CDS |
| AGCAGCCGCCCTTCCTCCGT+CGG | 0.512411 | 2_4:-40310702 | Msa0328150:CDS |
| GTCTTTGTAAAGGTCGAATG+AGG | 0.513877 | 2_4:+40310674 | None:intergenic |
| CGAAGGTGGTGGAGAATGAG+AGG | 0.518233 | 2_4:-40309966 | Msa0328150:CDS |
| AGGGGATTCCGACGGAGGAA+GGG | 0.518465 | 2_4:+40310694 | None:intergenic |
| CTTGTTGTTGTTGAATGCAA+CGG | 0.520747 | 2_4:+40310890 | Msa0328160:CDS |
| TGAGTTGGAGGCGCAATTGG+AGG | 0.523011 | 2_4:-40310145 | Msa0328150:CDS |
| GATAGGAACGGTCTTTGTAA+AGG | 0.523078 | 2_4:+40310664 | None:intergenic |
| TGAGCAAACTGTTGTTGAGT+TGG | 0.525689 | 2_4:-40310160 | Msa0328150:CDS |
| AAAATATAGTTATATATTGG+AGG | 0.526340 | 2_4:-40305743 | Msa0328150:CDS |
| TCAGCATAGGATTCAAGCAC+AGG | 0.527543 | 2_4:+40309256 | None:intergenic |
| GGAACTTGCTAGGAATGCTT+GGG | 0.527690 | 2_4:-40309827 | Msa0328150:CDS |
| CTCAAAGTATAAAGAACATG+TGG | 0.527765 | 2_4:-40305848 | Msa0328150:CDS |
| GCCATTGATGCGGGGTAGCA+GGG | 0.530312 | 2_4:+40310421 | None:intergenic |
| GTGGATTTGTTTAGCGGAAG+GGG | 0.530909 | 2_4:+40310566 | None:intergenic |
| GGATGAGCTTGAGAAAGAGA+AGG | 0.531000 | 2_4:-40310097 | Msa0328150:CDS |
| AAGTGTCTTTGGGTTGGCGA+CGG | 0.533107 | 2_4:+40310781 | None:intergenic |
| CCACATCATGATCAGCTAGC+TGG | 0.533202 | 2_4:+40306672 | None:intergenic |
| CGTGGATTTGTTTAGCGGAA+GGG | 0.535425 | 2_4:+40310565 | None:intergenic |
| GGTTTCGTGGATTTGTTTAG+CGG | 0.537126 | 2_4:+40310560 | None:intergenic |
| TCTCTTGATGTCATCAGCAT+AGG | 0.537512 | 2_4:+40309243 | None:intergenic |
| GATGAGCTTGAGAAAGAGAA+GGG | 0.537514 | 2_4:-40310096 | Msa0328150:CDS |
| TCAAAACCCATGATTTCAGC+AGG | 0.541601 | 2_4:+40309298 | None:intergenic |
| GGAGTTGATGGTTGCGATTG+CGG | 0.543181 | 2_4:+40310635 | None:intergenic |
| GCATAAGATCAAAGACTTGG+AGG | 0.544967 | 2_4:-40309770 | Msa0328150:CDS |
| AGAAGAAGAATAGAAAATGT+AGG | 0.546014 | 2_4:-40305285 | Msa0328150:three_prime_UTR |
| GAAAATGCTGCTAGGCTCGA+GGG | 0.547420 | 2_4:-40309169 | Msa0328150:CDS |
| TCGGAATCGCGGTGGTTGAG+AGG | 0.548735 | 2_4:+40310738 | None:intergenic |
| AAGGATTGAGCCGTTGGAGA+GGG | 0.549405 | 2_4:-40310019 | Msa0328150:CDS |
| TAAGTTTCATAAGATAATTG+AGG | 0.549470 | 2_4:-40310052 | Msa0328150:CDS |
| ATGCTTGGGAGGAAAAGTGT+TGG | 0.549756 | 2_4:-40309813 | Msa0328150:CDS |
| TGATGACATCAAGAGAAGTT+CGG | 0.549998 | 2_4:-40309236 | Msa0328150:CDS |
| GTTGGAGGCGCAATTGGAGG+AGG | 0.550019 | 2_4:-40310142 | Msa0328150:CDS |
| GAGCAAAATATGGAGCTGAA+TGG | 0.553849 | 2_4:+40305411 | None:intergenic |
| GAGAAGATTTGAAAGAGATG+TGG | 0.554044 | 2_4:+40310592 | None:intergenic |
| TGAGGAGCTTAAGACGAAAG+TGG | 0.557541 | 2_4:-40309929 | Msa0328150:CDS |
| ACCCATGATTTCAGCAGGCG+TGG | 0.557805 | 2_4:+40309303 | None:intergenic |
| ATTTGTTTAGCGGAAGGGGA+AGG | 0.562432 | 2_4:+40310570 | None:intergenic |
| CGAAAATGCTGCTAGGCTCG+AGG | 0.569406 | 2_4:-40309170 | Msa0328150:CDS |
| GGTAGGAAGTGTCTTTGGGT+TGG | 0.569598 | 2_4:+40310775 | None:intergenic |
| AGCATTGAAGGCCATTGATG+CGG | 0.572473 | 2_4:+40310411 | None:intergenic |
| AAAGAGAAGGGTGTGTTGGA+AGG | 0.573060 | 2_4:-40310084 | Msa0328150:CDS |
| GGATTCCGACGGAGGAAGGG+CGG | 0.574947 | 2_4:+40310697 | None:intergenic |
| TCAGTATGTGTTGAATCCCA+AGG | 0.575703 | 2_4:-40309329 | Msa0328150:CDS |
| TCATGAGAAGTCTGTTGCTG+AGG | 0.576689 | 2_4:-40310199 | Msa0328150:CDS |
| CGAGGCTATTCTTGATATGG+AGG | 0.579105 | 2_4:-40310244 | Msa0328150:CDS |
| TCTTTGTAAAGGTCGAATGA+GGG | 0.585965 | 2_4:+40310675 | None:intergenic |
| GCTGCTGACGAGACTGATGT+CGG | 0.586008 | 2_4:+40310719 | None:intergenic |
| GAAGCAATTGGAGGCGAAGG+TGG | 0.589483 | 2_4:-40309980 | Msa0328150:CDS |
| TAATTGAGGAGTTTGGGTCA+AGG | 0.591021 | 2_4:-40310038 | Msa0328150:CDS |
| TGTGGAAATTGTGAGAGGCG+AGG | 0.592842 | 2_4:+40310610 | None:intergenic |
| GGAGTTGCACGCTGTTGAGA+GGG | 0.593133 | 2_4:-40309863 | Msa0328150:CDS |
| ACCACGCCTGCTGAAATCAT+GGG | 0.594180 | 2_4:-40309304 | Msa0328150:CDS |
| ATTGCAACCAGGCCCTTAGG+AGG | 0.594319 | 2_4:-40309735 | Msa0328150:intron |
| AGGAGTTGCACGCTGTTGAG+AGG | 0.594789 | 2_4:-40309864 | Msa0328150:CDS |
| CCAGCTAGCTGATCATGATG+TGG | 0.595217 | 2_4:-40306672 | Msa0328150:CDS |
| TTGCATTCAACAACAACAAG+AGG | 0.601199 | 2_4:-40310887 | Msa0328150:five_prime_UTR |
| GAAGAAATTCAAATGCATGC+CGG | 0.605310 | 2_4:-40305898 | Msa0328150:CDS |
| TTGCGGATTGTTGATAGGAA+CGG | 0.605871 | 2_4:+40310652 | None:intergenic |
| GGAGAAGGAGAAGCAATTGG+AGG | 0.606698 | 2_4:-40309989 | Msa0328150:CDS |
| TGTTGAGAGGGATGCTGGTG+AGG | 0.608981 | 2_4:-40309851 | Msa0328150:CDS |
| CAAGGATTGAGCCGTTGGAG+AGG | 0.615648 | 2_4:-40310020 | Msa0328150:CDS |
| AAAGTTTCAGAGATTAGAAG+CGG | 0.616241 | 2_4:-40305820 | Msa0328150:CDS |
| GGAATCGCGGTGGTTGAGAG+GGG | 0.616778 | 2_4:+40310740 | None:intergenic |
| AAGTTTCAGAGATTAGAAGC+GGG | 0.618896 | 2_4:-40305819 | Msa0328150:CDS |
| CTTTGTAAAGGTCGAATGAG+GGG | 0.618950 | 2_4:+40310676 | None:intergenic |
| ACTTGCTAGGAATGCTTGGG+AGG | 0.620037 | 2_4:-40309824 | Msa0328150:CDS |
| AGTCCGCCGAAAATGCTGCT+AGG | 0.620707 | 2_4:-40309177 | Msa0328150:CDS |
| CAGTATGTGTTGAATCCCAA+GGG | 0.630232 | 2_4:-40309328 | Msa0328150:CDS |
| CATGATAAAGAAAGAAACAC+AGG | 0.630583 | 2_4:-40306744 | Msa0328150:CDS |
| CTCATCCTTCTTAGACGGCG+CGG | 0.632977 | 2_4:+40310113 | None:intergenic |
| TCAAAGTATAAAGAACATGT+GGG | 0.633300 | 2_4:-40305847 | Msa0328150:CDS |
| TATGGAAAGAGAGGCAGCTG+AGG | 0.635705 | 2_4:-40306645 | Msa0328150:CDS |
| CAGCTAGCTGATCATGATGT+GGG | 0.635721 | 2_4:-40306671 | Msa0328150:CDS |
| TGTGGGCATTATGGAAAGAG+AGG | 0.640887 | 2_4:-40306654 | Msa0328150:CDS |
| AAAATGCTGCTAGGCTCGAG+GGG | 0.643960 | 2_4:-40309168 | Msa0328150:CDS |
| GAATGAGGGGATTCCGACGG+AGG | 0.648475 | 2_4:+40310689 | None:intergenic |
| CGAGACTGATGTCGGAATCG+CGG | 0.650272 | 2_4:+40310727 | None:intergenic |
| TTAATGCGAGGGATGTGGAG+AGG | 0.655098 | 2_4:-40309894 | Msa0328150:CDS |
| TCCGCCAAAACCCTCTCCAA+CGG | 0.655375 | 2_4:+40310009 | None:intergenic |
| TGCATTCAACAACAACAAGA+GGG | 0.659772 | 2_4:-40310886 | Msa0328150:five_prime_UTR |
| GTCGAATGAGGGGATTCCGA+CGG | 0.660588 | 2_4:+40310686 | None:intergenic |
| GACTGATGTCGGAATCGCGG+TGG | 0.661612 | 2_4:+40310730 | None:intergenic |
| TGCCGAAGCTAAGAAGATGT+CGG | 0.664082 | 2_4:-40306702 | Msa0328150:CDS |
| GGAGAATGAGAGGATTGTTG+AGG | 0.664358 | 2_4:-40309956 | Msa0328150:CDS |
| CATTGAAGGCCATTGATGCG+GGG | 0.679311 | 2_4:+40310413 | None:intergenic |
| TGAGAGGGATGCTGGTGAGG+CGG | 0.679707 | 2_4:-40309848 | Msa0328150:CDS |
| TCTCTCCATAGATTGCAACC+AGG | 0.696902 | 2_4:-40309746 | Msa0328150:CDS |
| TGACATCAAGAGAAGTTCGG+TGG | 0.704206 | 2_4:-40309233 | Msa0328150:CDS |
| AGAGATGTGGAAATTGTGAG+AGG | 0.708472 | 2_4:+40310605 | None:intergenic |
| GAAATTCAAGGAGTTCGGTG+AGG | 0.740280 | 2_4:+40310529 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATAATAATATTAATAAT+AGG | - | chr2_4:40309095-40309114 | Msa0328150:intron | 0.0% |
| !! | TTGATTTATTAAGTTTAAAA+GGG | + | chr2_4:40305721-40305740 | None:intergenic | 10.0% |
| !!! | ATTGATTTATTAAGTTTAAA+AGG | + | chr2_4:40305722-40305741 | None:intergenic | 10.0% |
| !!! | AATTATCTTAATTTTATTAG+AGG | - | chr2_4:40305899-40305918 | Msa0328150:CDS | 10.0% |
| !! | AGAGTAAAAAAATTAAAAAA+AGG | - | chr2_4:40307902-40307921 | Msa0328150:intron | 10.0% |
| !! | GAGTAAAAAAATTAAAAAAA+GGG | - | chr2_4:40307903-40307922 | Msa0328150:intron | 10.0% |
| !!! | AGTATTTTAATTTTGTTTTT+CGG | + | chr2_4:40309205-40309224 | None:intergenic | 10.0% |
| !!! | ATATATAACTATATTTTTCT+GGG | + | chr2_4:40310426-40310445 | None:intergenic | 10.0% |
| !!! | AATATATAACTATATTTTTC+TGG | + | chr2_4:40310427-40310446 | None:intergenic | 10.0% |
| !! | AGAAAAATATAGTTATATAT+TGG | - | chr2_4:40310426-40310445 | Msa0328150:CDS | 10.0% |
| !! | CATAACAATAATATTCTATT+TGG | - | chr2_4:40305863-40305882 | Msa0328150:CDS | 15.0% |
| !! | ACAAATGATTATAATACAAA+CGG | + | chr2_4:40306498-40306517 | None:intergenic | 15.0% |
| !! | AAAATATAGTTATATATTGG+AGG | - | chr2_4:40310429-40310448 | Msa0328150:CDS | 15.0% |
| !!! | TGGTTAATTTTTTTTTTTGA+AGG | - | chr2_4:40310651-40310670 | Msa0328150:CDS | 15.0% |
| !!! | ATGAGATTTGAATTTTGTAT+CGG | + | chr2_4:40305258-40305277 | None:intergenic | 20.0% |
| !! | TAAGTTTCATAAGATAATTG+AGG | - | chr2_4:40306120-40306139 | Msa0328150:intron | 20.0% |
| !! | AAATGATTATAATACAAACG+GGG | + | chr2_4:40306496-40306515 | None:intergenic | 20.0% |
| !! | CAAATGATTATAATACAAAC+GGG | + | chr2_4:40306497-40306516 | None:intergenic | 20.0% |
| !! | ATAATCAATCTAAGAAAACT+AGG | + | chr2_4:40307155-40307174 | None:intergenic | 20.0% |
| !!! | GTTTGTTATGATAGAAATTA+AGG | - | chr2_4:40307450-40307469 | Msa0328150:intron | 20.0% |
| !!! | TACTGAAAAGTAATTTGTTA+AGG | - | chr2_4:40307485-40307504 | Msa0328150:intron | 20.0% |
| !!! | ACTGAAAAGTAATTTGTTAA+GGG | - | chr2_4:40307486-40307505 | Msa0328150:intron | 20.0% |
| !! | TTAGGAAAATAATGATCTAA+TGG | - | chr2_4:40307552-40307571 | Msa0328150:intron | 20.0% |
| !! | ATCAATTAAAAGAGTAGAAA+TGG | - | chr2_4:40307607-40307626 | Msa0328150:intron | 20.0% |
| !! | TGAACATTTATAGTTTCATT+TGG | + | chr2_4:40307789-40307808 | None:intergenic | 20.0% |
| !! | AAGTAAAATTTCAACATCAT+AGG | + | chr2_4:40307849-40307868 | None:intergenic | 20.0% |
| !!! | AAATCATTCATTGATTACTT+TGG | - | chr2_4:40308081-40308100 | Msa0328150:intron | 20.0% |
| !!! | AAATGCTCTTCAATTTTTTA+TGG | + | chr2_4:40308363-40308382 | None:intergenic | 20.0% |
| !! | GGCTCTATATTATAATTTAT+TGG | + | chr2_4:40308390-40308409 | None:intergenic | 20.0% |
| !! | CAATGTATATTATACTAGTA+TGG | - | chr2_4:40308484-40308503 | Msa0328150:intron | 20.0% |
| !! | TATATTATACTAGTATGGAT+GGG | - | chr2_4:40308489-40308508 | Msa0328150:intron | 20.0% |
| !! | AATAAGAAAATAAGTTCTGT+TGG | - | chr2_4:40308646-40308665 | Msa0328150:intron | 20.0% |
| !! | AAAAAAAAGGGGATATTATT+AGG | + | chr2_4:40308847-40308866 | None:intergenic | 20.0% |
| !! | TCAGAATTAGAACATTAATT+GGG | + | chr2_4:40308879-40308898 | None:intergenic | 20.0% |
| !! | ATCAGAATTAGAACATTAAT+TGG | + | chr2_4:40308880-40308899 | None:intergenic | 20.0% |
| !! | AAAAAATCCAAAAACTAAAC+TGG | + | chr2_4:40309758-40309777 | None:intergenic | 20.0% |
| !!! | TTGTGTTTCAATCATTTTTT+TGG | - | chr2_4:40309808-40309827 | Msa0328150:CDS | 20.0% |
| !! | TAGTAAATGATAATCAAACT+GGG | - | chr2_4:40309952-40309971 | Msa0328150:CDS | 20.0% |
| !!! | AACTTTTTATATTGTTGTCA+AGG | - | chr2_4:40310210-40310229 | Msa0328150:CDS | 20.0% |
| !! | AATCAACTTAAAAAGTTTAC+CGG | + | chr2_4:40310296-40310315 | None:intergenic | 20.0% |
| !!! | ATTCAATTCTCTGAATTTTA+CGG | + | chr2_4:40310459-40310478 | None:intergenic | 20.0% |
| !!! | CTTTTAAATATGAATGAATG+TGG | - | chr2_4:40310540-40310559 | Msa0328150:CDS | 20.0% |
| !!! | AAAGTAGGTTTTTTAGTATT+GGG | - | chr2_4:40310570-40310589 | Msa0328150:CDS | 20.0% |
| !!! | CTTTTAAATATGAATGAATG+TGG | - | chr2_4:40310540-40310559 | Msa0328150:CDS | 20.0% |
| !!! | AAAGTAGGTTTTTTAGTATT+GGG | - | chr2_4:40310570-40310589 | Msa0328150:CDS | 20.0% |
| !! | TGAGATTTGAATTTTGTATC+GGG | + | chr2_4:40305257-40305276 | None:intergenic | 25.0% |
| ! | ATAAGATAATTGAGGAGTTT+GGG | - | chr2_4:40306128-40306147 | Msa0328150:intron | 25.0% |
| ! | AAGAAAAAAAAACCTCCTAA+GGG | + | chr2_4:40306452-40306471 | None:intergenic | 25.0% |
| ! | AAAGAAAAAAAAACCTCCTA+AGG | + | chr2_4:40306453-40306472 | None:intergenic | 25.0% |
| ! | TACAAAATGTTGTCAAATAG+TGG | - | chr2_4:40306588-40306607 | Msa0328150:intron | 25.0% |
| ! | CTTGTGTGTTAATGTTAATA+GGG | - | chr2_4:40306758-40306777 | Msa0328150:CDS | 25.0% |
| ! | AGCGTTCATTACTATATTTA+AGG | - | chr2_4:40307400-40307419 | Msa0328150:intron | 25.0% |
| ! | ATTAAAAGAGTAGAAATGGA+TGG | - | chr2_4:40307611-40307630 | Msa0328150:intron | 25.0% |
| ! | TTAATTACTTAAACAACTCC+AGG | - | chr2_4:40307689-40307708 | Msa0328150:intron | 25.0% |
| ! | ACTATAAATGTTCATTTCAG+TGG | - | chr2_4:40307795-40307814 | Msa0328150:intron | 25.0% |
| !! | TTTTTACTCTTATACACGTA+TGG | + | chr2_4:40307892-40307911 | None:intergenic | 25.0% |
| ! | AAAGTTATAGTCAAACAGTA+AGG | - | chr2_4:40308159-40308178 | Msa0328150:intron | 25.0% |
| ! | TATAATATAGAGCCACAAAT+TGG | - | chr2_4:40308396-40308415 | Msa0328150:intron | 25.0% |
| ! | TTTATTTACTACTCCAGTTT+AGG | + | chr2_4:40308448-40308467 | None:intergenic | 25.0% |
| ! | GTATATTATACTAGTATGGA+TGG | - | chr2_4:40308488-40308507 | Msa0328150:intron | 25.0% |
| !!! | GTTTATTTCTGAATCATTGT+AGG | + | chr2_4:40308818-40308837 | None:intergenic | 25.0% |
| ! | CAATGATTCAGAAATAAACT+TGG | - | chr2_4:40308819-40308838 | Msa0328150:intron | 25.0% |
| ! | GGAAGAAAAAGAAAAAAAAG+GGG | + | chr2_4:40308858-40308877 | None:intergenic | 25.0% |
| ! | GGGAAGAAAAAGAAAAAAAA+GGG | + | chr2_4:40308859-40308878 | None:intergenic | 25.0% |
| ! | TGGGAAGAAAAAGAAAAAAA+AGG | + | chr2_4:40308860-40308879 | None:intergenic | 25.0% |
| ! | GTTACTTAAACTATGTACTT+TGG | + | chr2_4:40309127-40309146 | None:intergenic | 25.0% |
| ! | ACATAAACATTGTCAGAAAA+GGG | + | chr2_4:40309282-40309301 | None:intergenic | 25.0% |
| ! | AACATAAACATTGTCAGAAA+AGG | + | chr2_4:40309283-40309302 | None:intergenic | 25.0% |
| ! | GTTTATGTTACATTCTTTGT+TGG | - | chr2_4:40309294-40309313 | Msa0328150:CDS | 25.0% |
| ! | AGTTGTATTTGAACCAAATT+GGG | - | chr2_4:40309599-40309618 | Msa0328150:intron | 25.0% |
| ! | TTATTGTGTTTCAATGAACT+TGG | - | chr2_4:40309686-40309705 | Msa0328150:intron | 25.0% |
| ! | CAGTTTGATTATCATTTACT+AGG | + | chr2_4:40309953-40309972 | None:intergenic | 25.0% |
| ! | CTAGTAAATGATAATCAAAC+TGG | - | chr2_4:40309951-40309970 | Msa0328150:CDS | 25.0% |
| ! | ACAATGTTGTCACATAAATT+GGG | + | chr2_4:40310182-40310201 | None:intergenic | 25.0% |
| ! | TACAATGTTGTCACATAAAT+TGG | + | chr2_4:40310183-40310202 | None:intergenic | 25.0% |
| ! | TCAAAGTATAAAGAACATGT+GGG | - | chr2_4:40310325-40310344 | Msa0328150:CDS | 25.0% |
| !!! | GAAAGTAGGTTTTTTAGTAT+TGG | - | chr2_4:40310569-40310588 | Msa0328150:CDS | 25.0% |
| !!! | TTTTTTTGAAGGAATGAATG+TGG | - | chr2_4:40310662-40310681 | Msa0328150:CDS | 25.0% |
| !!! | GAAAGTAGGTTTTTTAGTAT+TGG | - | chr2_4:40310569-40310588 | Msa0328150:CDS | 25.0% |
| ! | ATGAATACAAGAGCAAAATA+TGG | + | chr2_4:40310774-40310793 | None:intergenic | 25.0% |
| ! | AGAAGAAGAATAGAAAATGT+AGG | - | chr2_4:40310887-40310906 | Msa0328150:five_prime_UTR | 25.0% |
| CATTTCAAAAAATCAATCCC+CGG | - | chr2_4:40305342-40305361 | Msa0328150:three_prime_UTR | 30.0% | |
| !! | TTTTTGTAACGGGAAATTCA+AGG | + | chr2_4:40305658-40305677 | None:intergenic | 30.0% |
| ! | ATCGTCTTCGATTTTTGTAA+CGG | + | chr2_4:40305669-40305688 | None:intergenic | 30.0% |
| TTGAAGAGTTTGAGAAGTAA+AGG | + | chr2_4:40305695-40305714 | None:intergenic | 30.0% | |
| !! | TGAATAAGACAAAGCATTGA+AGG | + | chr2_4:40305776-40305795 | None:intergenic | 30.0% |
| CATAAGATAATTGAGGAGTT+TGG | - | chr2_4:40306127-40306146 | Msa0328150:intron | 30.0% | |
| TATCTCAAAACAATAGCGTT+TGG | + | chr2_4:40306553-40306572 | None:intergenic | 30.0% | |
| TCAAATAGTGGTTGTTATAG+TGG | - | chr2_4:40306600-40306619 | Msa0328150:intron | 30.0% | |
| GCTTGTGTGTTAATGTTAAT+AGG | - | chr2_4:40306757-40306776 | Msa0328150:CDS | 30.0% | |
| ! | ACAGGTATATTACTAGTTTG+AGG | + | chr2_4:40307363-40307382 | None:intergenic | 30.0% |
| AAATATAGTAATGAACGCTG+CGG | + | chr2_4:40307399-40307418 | None:intergenic | 30.0% | |
| ! | TATATTTAAGGTCAACGTTG+TGG | - | chr2_4:40307412-40307431 | Msa0328150:intron | 30.0% |
| ACGATTCTATGTTCTTAGTT+AGG | + | chr2_4:40307520-40307539 | None:intergenic | 30.0% | |
| TGATATATTATGCAGTATCC+TGG | + | chr2_4:40307710-40307729 | None:intergenic | 30.0% | |
| AACATCATAGGATTTGAATG+AGG | + | chr2_4:40307837-40307856 | None:intergenic | 30.0% | |
| ! | GATTACTTTGGTAATCTTTC+AGG | - | chr2_4:40308093-40308112 | Msa0328150:intron | 30.0% |
| CAATTAATTTACTCACACGA+TGG | + | chr2_4:40308196-40308215 | None:intergenic | 30.0% | |
| GTGCAAAATAGAGCATATAT+AGG | + | chr2_4:40308294-40308313 | None:intergenic | 30.0% | |
| ! | GCATTCATATTAAGCTTTGA+TGG | + | chr2_4:40308339-40308358 | None:intergenic | 30.0% |
| ! | AGCTGAATTTTACCAATTTG+TGG | + | chr2_4:40308411-40308430 | None:intergenic | 30.0% |
| TGGGTAGAAAATTATATTCC+AGG | - | chr2_4:40308508-40308527 | Msa0328150:intron | 30.0% | |
| ACCCACAATTACAAAAATAG+AGG | - | chr2_4:40308566-40308585 | Msa0328150:intron | 30.0% | |
| !!! | CCCTCTATTTTTGTAATTGT+GGG | + | chr2_4:40308570-40308589 | None:intergenic | 30.0% |
| CCCACAATTACAAAAATAGA+GGG | - | chr2_4:40308567-40308586 | Msa0328150:intron | 30.0% | |
| CCACAATTACAAAAATAGAG+GGG | - | chr2_4:40308568-40308587 | Msa0328150:intron | 30.0% | |
| AATTACAAAAATAGAGGGGA+GGG | - | chr2_4:40308572-40308591 | Msa0328150:intron | 30.0% | |
| ! | TTATCATGTCTCCATTTTGA+TGG | + | chr2_4:40308676-40308695 | None:intergenic | 30.0% |
| ! | GTGCTATTGCTTCATTTAAT+GGG | + | chr2_4:40308775-40308794 | None:intergenic | 30.0% |
| ! | TGTGCTATTGCTTCATTTAA+TGG | + | chr2_4:40308776-40308795 | None:intergenic | 30.0% |
| CATTCTAAGCTAAGATATCA+TGG | + | chr2_4:40308920-40308939 | None:intergenic | 30.0% | |
| TGATATCTTAGCTTAGAATG+TGG | - | chr2_4:40308920-40308939 | Msa0328150:intron | 30.0% | |
| ATTATTTAAACATTGTCGCG+TGG | + | chr2_4:40309083-40309102 | None:intergenic | 30.0% | |
| TTAAACTATGTACTTTGGAC+TGG | + | chr2_4:40309122-40309141 | None:intergenic | 30.0% | |
| ATTCTTTGTTGGAGTTAGAA+GGG | - | chr2_4:40309305-40309324 | Msa0328150:CDS | 30.0% | |
| TCAAACAACAGTCTTTACAA+AGG | + | chr2_4:40309354-40309373 | None:intergenic | 30.0% | |
| !!! | TTGTTGTTTTATTCACTAGC+TGG | - | chr2_4:40309392-40309411 | Msa0328150:intron | 30.0% |
| CATGATAAAGAAAGAAACAC+AGG | - | chr2_4:40309428-40309447 | Msa0328150:intron | 30.0% | |
| CAGTTGTATTTGAACCAAAT+TGG | - | chr2_4:40309598-40309617 | Msa0328150:intron | 30.0% | |
| GTTGTATTTGAACCAAATTG+GGG | - | chr2_4:40309600-40309619 | Msa0328150:intron | 30.0% | |
| TTGTATTTGAACCAAATTGG+GGG | - | chr2_4:40309601-40309620 | Msa0328150:intron | 30.0% | |
| AATATGCATTCCACATTGAT+TGG | - | chr2_4:40309721-40309740 | Msa0328150:intron | 30.0% | |
| GATTGAAACACAAGATCAAT+GGG | + | chr2_4:40309801-40309820 | None:intergenic | 30.0% | |
| TGATTGAAACACAAGATCAA+TGG | + | chr2_4:40309802-40309821 | None:intergenic | 30.0% | |
| AAGCTTGCAATAAAAAGGAA+TGG | + | chr2_4:40309923-40309942 | None:intergenic | 30.0% | |
| ! | TTCCTTTTTATTGCAAGCTT+TGG | - | chr2_4:40309923-40309942 | Msa0328150:CDS | 30.0% |
| AATATCCATGTTGCTAAGTT+TGG | + | chr2_4:40310105-40310124 | None:intergenic | 30.0% | |
| ! | ATTGGGAAAGATTTAAAACG+AGG | + | chr2_4:40310165-40310184 | None:intergenic | 30.0% |
| CTCAAAGTATAAAGAACATG+TGG | - | chr2_4:40310324-40310343 | Msa0328150:CDS | 30.0% | |
| AAAGTTTCAGAGATTAGAAG+CGG | - | chr2_4:40310352-40310371 | Msa0328150:CDS | 30.0% | |
| GAATGTGGTTAATTGAAAGT+AGG | - | chr2_4:40310555-40310574 | Msa0328150:CDS | 30.0% | |
| GAATGTGGTTAATTGAAAGT+AGG | - | chr2_4:40310555-40310574 | Msa0328150:CDS | 30.0% | |
| GCATCTTTACATCAAATTGA+TGG | + | chr2_4:40310803-40310822 | None:intergenic | 30.0% | |
| ! | TTTGAATTTTGTATCGGGAG+AGG | + | chr2_4:40305252-40305271 | None:intergenic | 35.0% |
| ! | TTGTTGTTGTTGAATGCAAC+GGG | + | chr2_4:40305284-40305303 | None:intergenic | 35.0% |
| !! | CTTGTTGTTGTTGAATGCAA+CGG | + | chr2_4:40305285-40305304 | None:intergenic | 35.0% |
| TTGCATTCAACAACAACAAG+AGG | - | chr2_4:40305285-40305304 | Msa0328150:three_prime_UTR | 35.0% | |
| TGCATTCAACAACAACAAGA+GGG | - | chr2_4:40305286-40305305 | Msa0328150:three_prime_UTR | 35.0% | |
| TCTTTGTAAAGGTCGAATGA+GGG | + | chr2_4:40305500-40305519 | None:intergenic | 35.0% | |
| GAGAAGATTTGAAAGAGATG+TGG | + | chr2_4:40305583-40305602 | None:intergenic | 35.0% | |
| ! | TCGTCTTCGATTTTTGTAAC+GGG | + | chr2_4:40305668-40305687 | None:intergenic | 35.0% |
| ! | CAATGCTTTGTCTTATTCAC+TGG | - | chr2_4:40305777-40305796 | Msa0328150:CDS | 35.0% |
| AAATTGCTGCTATAGTCTAG+CGG | - | chr2_4:40306519-40306538 | Msa0328150:intron | 35.0% | |
| ! | TTGCTGATAGCGTAAAATAG+AGG | + | chr2_4:40306662-40306681 | None:intergenic | 35.0% |
| GTTTCATTTCATGTGCTTCT+AGG | - | chr2_4:40306800-40306819 | Msa0328150:intron | 35.0% | |
| TGATGACATCAAGAGAAGTT+CGG | - | chr2_4:40306936-40306955 | Msa0328150:intron | 35.0% | |
| GGATAGAGATTGATTATGTG+TGG | - | chr2_4:40307207-40307226 | Msa0328150:intron | 35.0% | |
| GGGTAATGTTGTTGAATTGA+TGG | - | chr2_4:40307289-40307308 | Msa0328150:intron | 35.0% | |
| AGTCAAACATAAATGAGACC+AGG | + | chr2_4:40307340-40307359 | None:intergenic | 35.0% | |
| AATCGTACTCACTCAACATT+AGG | - | chr2_4:40307534-40307553 | Msa0328150:intron | 35.0% | |
| GAAACACTTACATTGAAGCA+AGG | + | chr2_4:40307657-40307676 | None:intergenic | 35.0% | |
| ATTTGGAAGCAGTATTGTAC+AGG | + | chr2_4:40307772-40307791 | None:intergenic | 35.0% | |
| ATAGGATTTGAATGAGGAAG+GGG | + | chr2_4:40307831-40307850 | None:intergenic | 35.0% | |
| CATAGGATTTGAATGAGGAA+GGG | + | chr2_4:40307832-40307851 | None:intergenic | 35.0% | |
| TCATAGGATTTGAATGAGGA+AGG | + | chr2_4:40307833-40307852 | None:intergenic | 35.0% | |
| ! | AAGGGACAACTATGATTTGT+CGG | - | chr2_4:40307921-40307940 | Msa0328150:intron | 35.0% |
| ATAGCATACACCTTCTACAT+AGG | - | chr2_4:40308028-40308047 | Msa0328150:intron | 35.0% | |
| TAGCATACACCTTCTACATA+GGG | - | chr2_4:40308029-40308048 | Msa0328150:intron | 35.0% | |
| ! | TTATTTCTCCCCTATGTAGA+AGG | + | chr2_4:40308041-40308060 | None:intergenic | 35.0% |
| ! | ATTTTATTCCTGTGCAGGTA+TGG | + | chr2_4:40308065-40308084 | None:intergenic | 35.0% |
| ! | GAATGATTTTATTCCTGTGC+AGG | + | chr2_4:40308070-40308089 | None:intergenic | 35.0% |
| CTGCAGAATCAACATCTAAA+TGG | - | chr2_4:40308129-40308148 | Msa0328150:intron | 35.0% | |
| TAGTCAAACAGTAAGGATTG+TGG | - | chr2_4:40308166-40308185 | Msa0328150:intron | 35.0% | |
| ! | TAAGCTTTGATGGACAATGT+CGG | + | chr2_4:40308329-40308348 | None:intergenic | 35.0% |
| ATGTAAAACCCTACCTAAAC+TGG | - | chr2_4:40308432-40308451 | Msa0328150:intron | 35.0% | |
| TTACTACTCCAGTTTAGGTA+GGG | + | chr2_4:40308443-40308462 | None:intergenic | 35.0% | |
| TTTACTACTCCAGTTTAGGT+AGG | + | chr2_4:40308444-40308463 | None:intergenic | 35.0% | |
| ACAATGATATGTGCTTGGAA+TGG | + | chr2_4:40308536-40308555 | None:intergenic | 35.0% | |
| GTTCTACAATGATATGTGCT+TGG | + | chr2_4:40308541-40308560 | None:intergenic | 35.0% | |
| !!! | CCCCTCTATTTTTGTAATTG+TGG | + | chr2_4:40308571-40308590 | None:intergenic | 35.0% |
| CAATTACAAAAATAGAGGGG+AGG | - | chr2_4:40308571-40308590 | Msa0328150:intron | 35.0% | |
| ATTACAAAAATAGAGGGGAG+GGG | - | chr2_4:40308573-40308592 | Msa0328150:intron | 35.0% | |
| CATGATAAAGCTTCTACTTG+TGG | - | chr2_4:40308688-40308707 | Msa0328150:intron | 35.0% | |
| ! | TTCTCTGCAATTTGTTTAGG+TGG | + | chr2_4:40308746-40308765 | None:intergenic | 35.0% |
| ! | GTCTTCTCTGCAATTTGTTT+AGG | + | chr2_4:40308749-40308768 | None:intergenic | 35.0% |
| GCTAAGATATCATGGAAAGA+AGG | + | chr2_4:40308912-40308931 | None:intergenic | 35.0% | |
| GGGTAATGTTGTTGAATTGA+TGG | - | chr2_4:40307289-40307308 | Msa0328150:intron | 35.0% | |
| CATTCTTTGTTGGAGTTAGA+AGG | - | chr2_4:40309304-40309323 | Msa0328150:CDS | 35.0% | |
| !! | GAGGTTCTAAAGGTAATATC+TGG | - | chr2_4:40309546-40309565 | Msa0328150:intron | 35.0% |
| TTGTGTTTCAATGAACTTGG+AGG | - | chr2_4:40309689-40309708 | Msa0328150:intron | 35.0% | |
| TGTGTTTCAATGAACTTGGA+GGG | - | chr2_4:40309690-40309709 | Msa0328150:intron | 35.0% | |
| AAACTAAACTGGCACGAAAT+TGG | + | chr2_4:40309747-40309766 | None:intergenic | 35.0% | |
| !!! | TTTCGTGCCAGTTTAGTTTT+TGG | - | chr2_4:40309748-40309767 | Msa0328150:CDS | 35.0% |
| TATGCACTCATATTCTTGCA+CGG | + | chr2_4:40309845-40309864 | None:intergenic | 35.0% | |
| TACGAAAAACATGCTAGATG+TGG | + | chr2_4:40309889-40309908 | None:intergenic | 35.0% | |
| AGCCAAAGCTTGCAATAAAA+AGG | + | chr2_4:40309928-40309947 | None:intergenic | 35.0% | |
| CTGGGAATGTTGAAGATAAA+AGG | - | chr2_4:40309970-40309989 | Msa0328150:CDS | 35.0% | |
| TGTAGTAACGAGTTAGTTCA+AGG | - | chr2_4:40310058-40310077 | Msa0328150:CDS | 35.0% | |
| GTAGTAACGAGTTAGTTCAA+GGG | - | chr2_4:40310059-40310078 | Msa0328150:CDS | 35.0% | |
| TGGAGATAGTTTAAGCTTGA+TGG | + | chr2_4:40310085-40310104 | None:intergenic | 35.0% | |
| TATCTCCAAACTTAGCAACA+TGG | - | chr2_4:40310097-40310116 | Msa0328150:CDS | 35.0% | |
| GAAGAAATTCAAATGCATGC+CGG | - | chr2_4:40310274-40310293 | Msa0328150:CDS | 35.0% | |
| AAGTTTCAGAGATTAGAAGC+GGG | - | chr2_4:40310353-40310372 | Msa0328150:CDS | 35.0% | |
| TACGTGCATCATTAGATTGA+AGG | - | chr2_4:40310852-40310871 | Msa0328150:five_prime_UTR | 35.0% | |
| CTTTGTAAAGGTCGAATGAG+GGG | + | chr2_4:40305499-40305518 | None:intergenic | 40.0% | |
| GTCTTTGTAAAGGTCGAATG+AGG | + | chr2_4:40305501-40305520 | None:intergenic | 40.0% | |
| GATAGGAACGGTCTTTGTAA+AGG | + | chr2_4:40305511-40305530 | None:intergenic | 40.0% | |
| ! | TTGCGGATTGTTGATAGGAA+CGG | + | chr2_4:40305523-40305542 | None:intergenic | 40.0% |
| AGAGATGTGGAAATTGTGAG+AGG | + | chr2_4:40305570-40305589 | None:intergenic | 40.0% | |
| ! | GGTTTCGTGGATTTGTTTAG+CGG | + | chr2_4:40305615-40305634 | None:intergenic | 40.0% |
| TGAGGAAAATTAGGGTTTCG+TGG | + | chr2_4:40305628-40305647 | None:intergenic | 40.0% | |
| ! | GAGTTCGGTGAGGAAAATTA+GGG | + | chr2_4:40305636-40305655 | None:intergenic | 40.0% |
| AACGGGAAATTCAAGGAGTT+CGG | + | chr2_4:40305651-40305670 | None:intergenic | 40.0% | |
| ! | TTTTATTAGAGGCGATGACG+AGG | - | chr2_4:40305910-40305929 | Msa0328150:CDS | 40.0% |
| TGACGAGGCTATTCTTGATA+TGG | - | chr2_4:40305925-40305944 | Msa0328150:CDS | 40.0% | |
| TGAGCAAACTGTTGTTGAGT+TGG | - | chr2_4:40306012-40306031 | Msa0328150:intron | 40.0% | |
| TCAAGCTCATCCTTCTTAGA+CGG | + | chr2_4:40306067-40306086 | None:intergenic | 40.0% | |
| GATGAGCTTGAGAAAGAGAA+GGG | - | chr2_4:40306076-40306095 | Msa0328150:intron | 40.0% | |
| TAATTGAGGAGTTTGGGTCA+AGG | - | chr2_4:40306134-40306153 | Msa0328150:intron | 40.0% | |
| ! | AGTTGCAGACTTTTAATGCG+AGG | - | chr2_4:40306266-40306285 | Msa0328150:intron | 40.0% |
| ! | GTTGCAGACTTTTAATGCGA+GGG | - | chr2_4:40306267-40306286 | Msa0328150:intron | 40.0% |
| GCATAAGATCAAAGACTTGG+AGG | - | chr2_4:40306402-40306421 | Msa0328150:intron | 40.0% | |
| !!! | TGCTATAGTCTAGCGGATTT+TGG | - | chr2_4:40306526-40306545 | Msa0328150:intron | 40.0% |
| ! | TGTGCTTCTAGGTTGAAGAT+TGG | - | chr2_4:40306811-40306830 | Msa0328150:intron | 40.0% |
| TCAGTATGTGTTGAATCCCA+AGG | - | chr2_4:40306843-40306862 | Msa0328150:intron | 40.0% | |
| CAGTATGTGTTGAATCCCAA+GGG | - | chr2_4:40306844-40306863 | Msa0328150:intron | 40.0% | |
| TCAAAACCCATGATTTCAGC+AGG | + | chr2_4:40306877-40306896 | None:intergenic | 40.0% | |
| TCTCTTGATGTCATCAGCAT+AGG | + | chr2_4:40306932-40306951 | None:intergenic | 40.0% | |
| TGTGCTTGTGCTTTACATGA+AGG | - | chr2_4:40307121-40307140 | Msa0328150:intron | 40.0% | |
| TCTATCCAAACTCACTCTCT+CGG | + | chr2_4:40307194-40307213 | None:intergenic | 40.0% | |
| TTGATTATGTGTGGACAGTG+TGG | - | chr2_4:40307216-40307235 | Msa0328150:intron | 40.0% | |
| TTCCACATTCTAATTCCTGC+AGG | + | chr2_4:40307259-40307278 | None:intergenic | 40.0% | |
| CAGGTACAAGTTAGAAACAC+AGG | + | chr2_4:40307321-40307340 | None:intergenic | 40.0% | |
| ! | CTGTGTTTCTAACTTGTACC+TGG | - | chr2_4:40307319-40307338 | Msa0328150:intron | 40.0% |
| AATATACCTGTGCATCCGTA+TGG | - | chr2_4:40307372-40307391 | Msa0328150:intron | 40.0% | |
| ATATACCTGTGCATCCGTAT+GGG | - | chr2_4:40307373-40307392 | Msa0328150:intron | 40.0% | |
| ! | AGGGACAACTATGATTTGTC+GGG | - | chr2_4:40307922-40307941 | Msa0328150:intron | 40.0% |
| AGCATACACCTTCTACATAG+GGG | - | chr2_4:40308030-40308049 | Msa0328150:intron | 40.0% | |
| GAAATAAACCATACCTGCAC+AGG | - | chr2_4:40308054-40308073 | Msa0328150:intron | 40.0% | |
| CTGACATCACTTCCTGAAAT+AGG | - | chr2_4:40308259-40308278 | Msa0328150:intron | 40.0% | |
| ACAATGTCGGGCTTCTTATT+TGG | + | chr2_4:40308316-40308335 | None:intergenic | 40.0% | |
| ! | AAGCTTTGATGGACAATGTC+GGG | + | chr2_4:40308328-40308347 | None:intergenic | 40.0% |
| CTGTTGGTACACCATCAAAA+TGG | - | chr2_4:40308662-40308681 | Msa0328150:intron | 40.0% | |
| ! | TTCTAAGAACAGTTCACTGC+TGG | - | chr2_4:40308715-40308734 | Msa0328150:intron | 40.0% |
| GTGCAACAAGTAAGAAACAC+AGG | + | chr2_4:40308987-40309006 | None:intergenic | 40.0% | |
| TTGTCAGAAAAGGGAAGAGT+GGG | + | chr2_4:40309273-40309292 | None:intergenic | 40.0% | |
| ATTGTCAGAAAAGGGAAGAG+TGG | + | chr2_4:40309274-40309293 | None:intergenic | 40.0% | |
| TCACTAGCTGGAAACTCAAA+TGG | - | chr2_4:40309404-40309423 | Msa0328150:intron | 40.0% | |
| TGATCATGATGTGGGCATTA+TGG | - | chr2_4:40309509-40309528 | Msa0328150:intron | 40.0% | |
| TTGAACCAAATTGGGGGAAA+AGG | - | chr2_4:40309607-40309626 | Msa0328150:intron | 40.0% | |
| ACGAAATTGGCCAATCAATG+TGG | + | chr2_4:40309734-40309753 | None:intergenic | 40.0% | |
| GAGCAAAATATGGAGCTGAA+TGG | + | chr2_4:40310764-40310783 | None:intergenic | 40.0% | |
| !! | GGAAGGTAGGAAGTGTCTTT+GGG | + | chr2_4:40305404-40305423 | None:intergenic | 45.0% |
| !! | TGGAAGGTAGGAAGTGTCTT+TGG | + | chr2_4:40305405-40305424 | None:intergenic | 45.0% |
| ! | TGCGATTGCGGATTGTTGAT+AGG | + | chr2_4:40305528-40305547 | None:intergenic | 45.0% |
| ATTTGTTTAGCGGAAGGGGA+AGG | + | chr2_4:40305605-40305624 | None:intergenic | 45.0% | |
| ! | GTGGATTTGTTTAGCGGAAG+GGG | + | chr2_4:40305609-40305628 | None:intergenic | 45.0% |
| ! | CGTGGATTTGTTTAGCGGAA+GGG | + | chr2_4:40305610-40305629 | None:intergenic | 45.0% |
| ! | TCGTGGATTTGTTTAGCGGA+AGG | + | chr2_4:40305611-40305630 | None:intergenic | 45.0% |
| ! | GGAGTTCGGTGAGGAAAATT+AGG | + | chr2_4:40305637-40305656 | None:intergenic | 45.0% |
| ! | GAAATTCAAGGAGTTCGGTG+AGG | + | chr2_4:40305646-40305665 | None:intergenic | 45.0% |
| ! | AGCATTGAAGGCCATTGATG+CGG | + | chr2_4:40305764-40305783 | None:intergenic | 45.0% |
| TCGACGAATTCGAGAGAGAT+AGG | + | chr2_4:40305826-40305845 | None:intergenic | 45.0% | |
| CGAGGCTATTCTTGATATGG+AGG | - | chr2_4:40305928-40305947 | Msa0328150:CDS | 45.0% | |
| TCATGAGAAGTCTGTTGCTG+AGG | - | chr2_4:40305973-40305992 | Msa0328150:intron | 45.0% | |
| !! | GCAAACTGTTGTTGAGTTGG+AGG | - | chr2_4:40306015-40306034 | Msa0328150:intron | 45.0% |
| GGATGAGCTTGAGAAAGAGA+AGG | - | chr2_4:40306075-40306094 | Msa0328150:intron | 45.0% | |
| ! | TGAGAAAGAGAAGGGTGTGT+TGG | - | chr2_4:40306084-40306103 | Msa0328150:intron | 45.0% |
| ! | AAAGAGAAGGGTGTGTTGGA+AGG | - | chr2_4:40306088-40306107 | Msa0328150:intron | 45.0% |
| GGAGAATGAGAGGATTGTTG+AGG | - | chr2_4:40306216-40306235 | Msa0328150:intron | 45.0% | |
| GAGGATTGTTGAGGAGAATG+AGG | - | chr2_4:40306225-40306244 | Msa0328150:intron | 45.0% | |
| TGAGGAGCTTAAGACGAAAG+TGG | - | chr2_4:40306243-40306262 | Msa0328150:intron | 45.0% | |
| ! | GACTTTTAATGCGAGGGATG+TGG | - | chr2_4:40306273-40306292 | Msa0328150:intron | 45.0% |
| !! | GGAACTTGCTAGGAATGCTT+GGG | - | chr2_4:40306345-40306364 | Msa0328150:intron | 45.0% |
| ! | ATGCTTGGGAGGAAAAGTGT+TGG | - | chr2_4:40306359-40306378 | Msa0328150:intron | 45.0% |
| !! | TGCTTGGGAGGAAAAGTGTT+GGG | - | chr2_4:40306360-40306379 | Msa0328150:intron | 45.0% |
| CGCGCATAAGATCAAAGACT+TGG | - | chr2_4:40306399-40306418 | Msa0328150:intron | 45.0% | |
| TCTCTCCATAGATTGCAACC+AGG | - | chr2_4:40306426-40306445 | Msa0328150:intron | 45.0% | |
| AAAAAAACCTCCTAAGGGCC+TGG | + | chr2_4:40306447-40306466 | None:intergenic | 45.0% | |
| CTAGTCAAGTGTGCACTGTT+TGG | - | chr2_4:40306704-40306723 | Msa0328150:CDS | 45.0% | |
| TCAGCATAGGATTCAAGCAC+AGG | + | chr2_4:40306919-40306938 | None:intergenic | 45.0% | |
| TGACATCAAGAGAAGTTCGG+TGG | - | chr2_4:40306939-40306958 | Msa0328150:intron | 45.0% | |
| ! | GAGAAGTTCGGTGGTGAAAT+TGG | - | chr2_4:40306948-40306967 | Msa0328150:intron | 45.0% |
| GGTGGTGAAATTGGAAGAGT+TGG | - | chr2_4:40306957-40306976 | Msa0328150:intron | 45.0% | |
| !! | TTCGGCGGACTTTTTCTGAA+GGG | + | chr2_4:40306986-40307005 | None:intergenic | 45.0% |
| !! | TTTCGGCGGACTTTTTCTGA+AGG | + | chr2_4:40306987-40307006 | None:intergenic | 45.0% |
| ATGTACCGAGAGAGTGAGTT+TGG | - | chr2_4:40307186-40307205 | Msa0328150:intron | 45.0% | |
| TAGAATGTGGAAGCTGATGC+AGG | - | chr2_4:40307267-40307286 | Msa0328150:intron | 45.0% | |
| AGAATGTGGAAGCTGATGCA+GGG | - | chr2_4:40307268-40307287 | Msa0328150:intron | 45.0% | |
| ! | GGGACAACTATGATTTGTCG+GGG | - | chr2_4:40307923-40307942 | Msa0328150:intron | 45.0% |
| ! | GGACAACTATGATTTGTCGG+GGG | - | chr2_4:40307924-40307943 | Msa0328150:intron | 45.0% |
| ! | AACTATGATTTGTCGGGGGT+AGG | - | chr2_4:40307928-40307947 | Msa0328150:intron | 45.0% |
| ! | ACTATGATTTGTCGGGGGTA+GGG | - | chr2_4:40307929-40307948 | Msa0328150:intron | 45.0% |
| CACTTCCTGAAATAGGCTTC+TGG | - | chr2_4:40308266-40308285 | Msa0328150:intron | 45.0% | |
| AGGATCCAGAAGCCTATTTC+AGG | + | chr2_4:40308274-40308293 | None:intergenic | 45.0% | |
| TATGTGCTTGGAATGGTTCC+TGG | + | chr2_4:40308529-40308548 | None:intergenic | 45.0% | |
| CTGAATCATTGTAGGTGTGC+TGG | + | chr2_4:40308810-40308829 | None:intergenic | 45.0% | |
| TGCCGAAGCTAAGAAGATGT+CGG | - | chr2_4:40309470-40309489 | Msa0328150:intron | 45.0% | |
| GTCCGACATCTTCTTAGCTT+CGG | + | chr2_4:40309475-40309494 | None:intergenic | 45.0% | |
| CAGCTAGCTGATCATGATGT+GGG | - | chr2_4:40309501-40309520 | Msa0328150:intron | 45.0% | |
| TGTGGGCATTATGGAAAGAG+AGG | - | chr2_4:40309518-40309537 | Msa0328150:intron | 45.0% | |
| TGGGTAGCAACTAGCATCTT+AGG | + | chr2_4:40309782-40309801 | None:intergenic | 45.0% | |
| !! | TAAATAAAATGATATTAAAA+TGG | - | chr2_4:40308460-40308479 | Msa0328150:intron | 5.0% |
| !! | AAATAAAATGATATTAAAAT+GGG | - | chr2_4:40308461-40308480 | Msa0328150:intron | 5.0% |
| !! | AAAATTAAAATACTATTAAA+AGG | - | chr2_4:40309211-40309230 | Msa0328150:CDS | 5.0% |
| !! | GTGGGTTGTCTCATTTTCCG+GGG | + | chr2_4:40305362-40305381 | None:intergenic | 50.0% |
| !!! | GGTGGGTTGTCTCATTTTCC+GGG | + | chr2_4:40305363-40305382 | None:intergenic | 50.0% |
| !!! | CGGTGGGTTGTCTCATTTTC+CGG | + | chr2_4:40305364-40305383 | None:intergenic | 50.0% |
| !! | AAGTGTCTTTGGGTTGGCGA+CGG | + | chr2_4:40305394-40305413 | None:intergenic | 50.0% |
| !! | GGTAGGAAGTGTCTTTGGGT+TGG | + | chr2_4:40305400-40305419 | None:intergenic | 50.0% |
| !! | GGAGTTGATGGTTGCGATTG+CGG | + | chr2_4:40305540-40305559 | None:intergenic | 50.0% |
| GAAATTGTGAGAGGCGAGGA+AGG | + | chr2_4:40305561-40305580 | None:intergenic | 50.0% | |
| TGTGGAAATTGTGAGAGGCG+AGG | + | chr2_4:40305565-40305584 | None:intergenic | 50.0% | |
| CATTGAAGGCCATTGATGCG+GGG | + | chr2_4:40305762-40305781 | None:intergenic | 50.0% | |
| GCATTGAAGGCCATTGATGC+GGG | + | chr2_4:40305763-40305782 | None:intergenic | 50.0% | |
| GTCTGTTGCTGAGGAGAAAC+TGG | - | chr2_4:40305982-40306001 | Msa0328150:intron | 50.0% | |
| !! | TGTTGAGTTGGAGGCGCAAT+TGG | - | chr2_4:40306024-40306043 | Msa0328150:intron | 50.0% |
| AAGGATTGAGCCGTTGGAGA+GGG | - | chr2_4:40306153-40306172 | Msa0328150:intron | 50.0% | |
| GGAGAAGGAGAAGCAATTGG+AGG | - | chr2_4:40306183-40306202 | Msa0328150:intron | 50.0% | |
| TTAATGCGAGGGATGTGGAG+AGG | - | chr2_4:40306278-40306297 | Msa0328150:intron | 50.0% | |
| GGATGTGGAGAGGATGAAGA+AGG | - | chr2_4:40306288-40306307 | Msa0328150:intron | 50.0% | |
| !! | CGGAACTTGCTAGGAATGCT+TGG | - | chr2_4:40306344-40306363 | Msa0328150:intron | 50.0% |
| ! | ACTTGCTAGGAATGCTTGGG+AGG | - | chr2_4:40306348-40306367 | Msa0328150:intron | 50.0% |
| AAGGGCCTGGTTGCAATCTA+TGG | + | chr2_4:40306434-40306453 | None:intergenic | 50.0% | |
| TAGATTGCAACCAGGCCCTT+AGG | - | chr2_4:40306434-40306453 | Msa0328150:intron | 50.0% | |
| AACCACGCCTGCTGAAATCA+TGG | - | chr2_4:40306867-40306886 | Msa0328150:intron | 50.0% | |
| ACCACGCCTGCTGAAATCAT+GGG | - | chr2_4:40306868-40306887 | Msa0328150:intron | 50.0% | |
| ! | CTCGAGCCTAGCAGCATTTT+CGG | + | chr2_4:40307004-40307023 | None:intergenic | 50.0% |
| GAAAATGCTGCTAGGCTCGA+GGG | - | chr2_4:40307003-40307022 | Msa0328150:intron | 50.0% | |
| AAAATGCTGCTAGGCTCGAG+GGG | - | chr2_4:40307004-40307023 | Msa0328150:intron | 50.0% | |
| TGGACAGTGTGGTATCAGAG+TGG | - | chr2_4:40307227-40307246 | Msa0328150:intron | 50.0% | |
| GGCCTGCAGGAATTAGAATG+TGG | - | chr2_4:40307254-40307273 | Msa0328150:intron | 50.0% | |
| GAATGTGGAAGCTGATGCAG+GGG | - | chr2_4:40307269-40307288 | Msa0328150:intron | 50.0% | |
| ! | CTATGATTTGTCGGGGGTAG+GGG | - | chr2_4:40307930-40307949 | Msa0328150:intron | 50.0% |
| ! | TATGATTTGTCGGGGGTAGG+GGG | - | chr2_4:40307931-40307950 | Msa0328150:intron | 50.0% |
| TAGAATGTGGAAGCTGACGC+AGG | - | chr2_4:40308933-40308952 | Msa0328150:intron | 50.0% | |
| AGAATGTGGAAGCTGACGCA+GGG | - | chr2_4:40308934-40308953 | Msa0328150:intron | 50.0% | |
| GGAGTCAGAGGACAAGTACA+AGG | + | chr2_4:40309062-40309081 | None:intergenic | 50.0% | |
| CCACATCATGATCAGCTAGC+TGG | + | chr2_4:40309503-40309522 | None:intergenic | 50.0% | |
| CCAGCTAGCTGATCATGATG+TGG | - | chr2_4:40309500-40309519 | Msa0328150:intron | 50.0% | |
| TATGGAAAGAGAGGCAGCTG+AGG | - | chr2_4:40309527-40309546 | Msa0328150:intron | 50.0% | |
| ! | AGAGGCAGCTGAGGTTCTAA+AGG | - | chr2_4:40309536-40309555 | Msa0328150:intron | 50.0% |
| ! | CATCGCCTTTTCCCCCAATT+TGG | + | chr2_4:40309615-40309634 | None:intergenic | 50.0% |
| CAAATTGGGGGAAAAGGCGA+TGG | - | chr2_4:40309613-40309632 | Msa0328150:intron | 50.0% | |
| CGAGACTGATGTCGGAATCG+CGG | + | chr2_4:40305448-40305467 | None:intergenic | 55.0% | |
| GCTGCTGACGAGACTGATGT+CGG | + | chr2_4:40305456-40305475 | None:intergenic | 55.0% | |
| GTCGAATGAGGGGATTCCGA+CGG | + | chr2_4:40305489-40305508 | None:intergenic | 55.0% | |
| AGAGGCGAGGAAGGAGTTGA+TGG | + | chr2_4:40305552-40305571 | None:intergenic | 55.0% | |
| ! | TGAGTTGGAGGCGCAATTGG+AGG | - | chr2_4:40306027-40306046 | Msa0328150:intron | 55.0% |
| CTCATCCTTCTTAGACGGCG+CGG | + | chr2_4:40306062-40306081 | None:intergenic | 55.0% | |
| TGGGTCAAGGATTGAGCCGT+TGG | - | chr2_4:40306147-40306166 | Msa0328150:intron | 55.0% | |
| CAAGGATTGAGCCGTTGGAG+AGG | - | chr2_4:40306152-40306171 | Msa0328150:intron | 55.0% | |
| ! | TGAGCCGTTGGAGAGGGTTT+TGG | - | chr2_4:40306159-40306178 | Msa0328150:intron | 55.0% |
| TCCGCCAAAACCCTCTCCAA+CGG | + | chr2_4:40306166-40306185 | None:intergenic | 55.0% | |
| GGCGGAGAAGGAGAAGCAAT+TGG | - | chr2_4:40306180-40306199 | Msa0328150:intron | 55.0% | |
| GGAGAAGCAATTGGAGGCGA+AGG | - | chr2_4:40306189-40306208 | Msa0328150:intron | 55.0% | |
| GAAGCAATTGGAGGCGAAGG+TGG | - | chr2_4:40306192-40306211 | Msa0328150:intron | 55.0% | |
| !! | CGAAGGTGGTGGAGAATGAG+AGG | - | chr2_4:40306206-40306225 | Msa0328150:intron | 55.0% |
| AGGAGTTGCACGCTGTTGAG+AGG | - | chr2_4:40306308-40306327 | Msa0328150:intron | 55.0% | |
| GGAGTTGCACGCTGTTGAGA+GGG | - | chr2_4:40306309-40306328 | Msa0328150:intron | 55.0% | |
| TGTTGAGAGGGATGCTGGTG+AGG | - | chr2_4:40306321-40306340 | Msa0328150:intron | 55.0% | |
| ATTGCAACCAGGCCCTTAGG+AGG | - | chr2_4:40306437-40306456 | Msa0328150:intron | 55.0% | |
| ACCCATGATTTCAGCAGGCG+TGG | + | chr2_4:40306872-40306891 | None:intergenic | 55.0% | |
| AGTCCGCCGAAAATGCTGCT+AGG | - | chr2_4:40306995-40307014 | Msa0328150:intron | 55.0% | |
| ! | GAGCCTAGCAGCATTTTCGG+CGG | + | chr2_4:40307001-40307020 | None:intergenic | 55.0% |
| CGAAAATGCTGCTAGGCTCG+AGG | - | chr2_4:40307002-40307021 | Msa0328150:intron | 55.0% | |
| GTGTGGTATCAGAGTGGTGC+TGG | - | chr2_4:40307233-40307252 | Msa0328150:intron | 55.0% | |
| AATGAACGCTGCGGCCCATA+CGG | + | chr2_4:40307390-40307409 | None:intergenic | 55.0% | |
| ! | ATGATTTGTCGGGGGTAGGG+GGG | - | chr2_4:40307932-40307951 | Msa0328150:intron | 55.0% |
| GAATGTGGAAGCTGACGCAG+GGG | - | chr2_4:40308935-40308954 | Msa0328150:intron | 55.0% | |
| ACATTGTCGCGTGGAGTCAG+AGG | + | chr2_4:40309074-40309093 | None:intergenic | 55.0% | |
| !! | GTCTTTGGGTTGGCGACGGT+GGG | + | chr2_4:40305390-40305409 | None:intergenic | 60.0% |
| !! | TGTCTTTGGGTTGGCGACGG+TGG | + | chr2_4:40305391-40305410 | None:intergenic | 60.0% |
| !! | AGGGGTTGGTGGTGGAAGGT+AGG | + | chr2_4:40305417-40305436 | None:intergenic | 60.0% |
| !! | TGAGAGGGGTTGGTGGTGGA+AGG | + | chr2_4:40305421-40305440 | None:intergenic | 60.0% |
| !! | TGGTTGAGAGGGGTTGGTGG+TGG | + | chr2_4:40305425-40305444 | None:intergenic | 60.0% |
| GGAATCGCGGTGGTTGAGAG+GGG | + | chr2_4:40305435-40305454 | None:intergenic | 60.0% | |
| CGGAATCGCGGTGGTTGAGA+GGG | + | chr2_4:40305436-40305455 | None:intergenic | 60.0% | |
| TCGGAATCGCGGTGGTTGAG+AGG | + | chr2_4:40305437-40305456 | None:intergenic | 60.0% | |
| GACTGATGTCGGAATCGCGG+TGG | + | chr2_4:40305445-40305464 | None:intergenic | 60.0% | |
| AGGGGATTCCGACGGAGGAA+GGG | + | chr2_4:40305481-40305500 | None:intergenic | 60.0% | |
| GAATGAGGGGATTCCGACGG+AGG | + | chr2_4:40305486-40305505 | None:intergenic | 60.0% | |
| ACCCTGCTACCCCGCATCAA+TGG | - | chr2_4:40305750-40305769 | Msa0328150:CDS | 60.0% | |
| GCCATTGATGCGGGGTAGCA+GGG | + | chr2_4:40305754-40305773 | None:intergenic | 60.0% | |
| ! | GTTGGAGGCGCAATTGGAGG+AGG | - | chr2_4:40306030-40306049 | Msa0328150:intron | 60.0% |
| GAGATCCGCGCCGTCTAAGA+AGG | - | chr2_4:40306054-40306073 | Msa0328150:intron | 60.0% | |
| !! | GCCGTTGGAGAGGGTTTTGG+CGG | - | chr2_4:40306162-40306181 | Msa0328150:intron | 60.0% |
| !! | GGAGAGGGTTTTGGCGGAGA+AGG | - | chr2_4:40306168-40306187 | Msa0328150:intron | 60.0% |
| GCAATTGGAGGCGAAGGTGG+TGG | - | chr2_4:40306195-40306214 | Msa0328150:intron | 60.0% | |
| CACGCTGTTGAGAGGGATGC+TGG | - | chr2_4:40306316-40306335 | Msa0328150:intron | 60.0% | |
| TGAGAGGGATGCTGGTGAGG+CGG | - | chr2_4:40306324-40306343 | Msa0328150:intron | 60.0% | |
| ! | CTGGTGAGGCGGAACTTGCT+AGG | - | chr2_4:40306335-40306354 | Msa0328150:intron | 60.0% |
| TCAGCAGGCGTGGTTCCCTT+GGG | + | chr2_4:40306862-40306881 | None:intergenic | 60.0% | |
| TTCAGCAGGCGTGGTTCCCT+TGG | + | chr2_4:40306863-40306882 | None:intergenic | 60.0% | |
| !! | TTTGGGTTGGCGACGGTGGG+TGG | + | chr2_4:40305387-40305406 | None:intergenic | 65.0% |
| CGGTGGTTGAGAGGGGTTGG+TGG | + | chr2_4:40305428-40305447 | None:intergenic | 65.0% | |
| TCGCGGTGGTTGAGAGGGGT+TGG | + | chr2_4:40305431-40305450 | None:intergenic | 65.0% | |
| GGATTCCGACGGAGGAAGGG+CGG | + | chr2_4:40305478-40305497 | None:intergenic | 65.0% | |
| GAGGGGATTCCGACGGAGGA+AGG | + | chr2_4:40305482-40305501 | None:intergenic | 65.0% | |
| GGCCATTGATGCGGGGTAGC+AGG | + | chr2_4:40305755-40305774 | None:intergenic | 65.0% | |
| !! | TCAGAGTGGTGCTGGCCTGC+AGG | - | chr2_4:40307241-40307260 | Msa0328150:intron | 65.0% |
| TGCGGCCCATACGGATGCAC+AGG | + | chr2_4:40307381-40307400 | None:intergenic | 65.0% | |
| AGCAGCCGCCCTTCCTCCGT+CGG | - | chr2_4:40305470-40305489 | Msa0328150:three_prime_UTR | 70.0% | |
| ! | TGGCGACGGTGGGTGGCGGT+GGG | + | chr2_4:40305380-40305399 | None:intergenic | 75.0% |
| ! | TTGGCGACGGTGGGTGGCGG+TGG | + | chr2_4:40305381-40305400 | None:intergenic | 75.0% |
| ! | GGGTTGGCGACGGTGGGTGG+CGG | + | chr2_4:40305384-40305403 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 40305245 | 40310949 | 40305245 | ID=Msa0328150;Name=Msa0328150 |
| chr2_4 | mRNA | 40305245 | 40310949 | 40305245 | ID=Msa0328150-mRNA-1;Parent=Msa0328150;Name=Msa0328150-mRNA-1;_AED=0.01;_eAED=0.01;_QI=123|1|1|1|0.75|0.6|5|438|577 |
| chr2_4 | exon | 40305245 | 40305521 | 40305245 | ID=Msa0328150-mRNA-1:exon:12326;Parent=Msa0328150-mRNA-1 |
| chr2_4 | exon | 40305553 | 40305962 | 40305553 | ID=Msa0328150-mRNA-1:exon:12325;Parent=Msa0328150-mRNA-1 |
| chr2_4 | exon | 40306637 | 40306783 | 40306637 | ID=Msa0328150-mRNA-1:exon:12324;Parent=Msa0328150-mRNA-1 |
| chr2_4 | exon | 40309126 | 40309372 | 40309126 | ID=Msa0328150-mRNA-1:exon:12323;Parent=Msa0328150-mRNA-1 |
| chr2_4 | exon | 40309736 | 40310949 | 40309736 | ID=Msa0328150-mRNA-1:exon:12322;Parent=Msa0328150-mRNA-1 |
| chr2_4 | five_prime_UTR | 40310827 | 40310949 | 40310827 | ID=Msa0328150-mRNA-1:five_prime_utr;Parent=Msa0328150-mRNA-1 |
| chr2_4 | CDS | 40309736 | 40310826 | 40309736 | ID=Msa0328150-mRNA-1:cds;Parent=Msa0328150-mRNA-1 |
| chr2_4 | CDS | 40309126 | 40309372 | 40309126 | ID=Msa0328150-mRNA-1:cds;Parent=Msa0328150-mRNA-1 |
| chr2_4 | CDS | 40306637 | 40306783 | 40306637 | ID=Msa0328150-mRNA-1:cds;Parent=Msa0328150-mRNA-1 |
| chr2_4 | CDS | 40305714 | 40305962 | 40305714 | ID=Msa0328150-mRNA-1:cds;Parent=Msa0328150-mRNA-1 |
| chr2_4 | three_prime_UTR | 40305553 | 40305713 | 40305553 | ID=Msa0328150-mRNA-1:three_prime_utr;Parent=Msa0328150-mRNA-1 |
| chr2_4 | three_prime_UTR | 40305245 | 40305521 | 40305245 | ID=Msa0328150-mRNA-1:three_prime_utr;Parent=Msa0328150-mRNA-1 |
| Gene Sequence |
| Protein sequence |
