AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0212870

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0212870 MtrunA17_Chr2g0312321 99.349 307 1 1 1 307 1 306 0.0 640
Msa0212870 MtrunA17_Chr4g0060931 44.558 294 127 11 1 262 1 290 1.66e-67 214
Msa0212870 MtrunA17_Chr1g0183741 47.280 239 106 5 7 241 6 228 1.77e-67 212
Msa0212870 MtrunA17_Chr6g0484441 47.982 223 108 4 7 226 1 218 2.38e-67 213
Msa0212870 MtrunA17_Chr7g0261411 63.226 155 48 3 7 157 6 155 3.35e-67 211
Msa0212870 MtrunA17_Chr6g0453451 51.724 203 93 3 10 208 19 220 3.07e-65 207
Msa0212870 MtrunA17_Chr7g0253011 55.276 199 70 7 11 192 17 213 6.33e-65 209
Msa0212870 MtrunA17_Chr2g0316971 62.420 157 54 3 8 159 20 176 1.25e-62 202
Msa0212870 MtrunA17_Chr6g0461661 53.723 188 75 5 11 186 18 205 1.49e-61 200
Msa0212870 MtrunA17_Chr3g0091921 51.741 201 81 5 1 187 1 199 1.75e-61 197
Msa0212870 MtrunA17_Chr1g0147421 57.229 166 63 3 8 168 24 186 2.29e-61 199
Msa0212870 MtrunA17_Chr3g0139331 58.333 156 56 4 8 158 8 159 5.49e-59 192
Msa0212870 MtrunA17_Chr2g0309891 56.098 164 68 2 6 165 1 164 6.68e-57 187
Msa0212870 MtrunA17_Chr1g0200561 53.797 158 63 4 7 158 15 168 1.20e-55 184
Msa0212870 MtrunA17_Chr4g0018391 55.128 156 60 4 9 158 5 156 1.21e-55 184
Msa0212870 MtrunA17_Chr4g0056541 54.321 162 66 3 9 165 5 163 7.72e-55 182
Msa0212870 MtrunA17_Chr5g0398971 42.570 249 123 9 1 237 1 241 6.36e-54 179
Msa0212870 MtrunA17_Chr5g0405211 52.532 158 65 4 7 158 4 157 9.86e-54 179
Msa0212870 MtrunA17_Chr8g0372121 49.697 165 75 3 6 165 1 162 1.61e-53 177
Msa0212870 MtrunA17_Chr3g0144271 58.273 139 53 2 8 141 20 158 3.72e-53 179
Msa0212870 MtrunA17_Chr4g0017921 52.500 160 67 3 4 158 1 156 6.23e-53 177
Msa0212870 MtrunA17_Chr7g0217721 42.424 231 109 7 8 217 16 243 1.22e-52 176
Msa0212870 MtrunA17_Chr8g0346001 48.824 170 74 4 8 164 12 181 5.10e-52 176
Msa0212870 MtrunA17_Chr8g0359921 35.093 322 174 8 6 301 9 321 7.70e-52 173
Msa0212870 MtrunA17_Chr3g0109821 51.744 172 76 3 6 173 1 169 5.60e-51 178
Msa0212870 MtrunA17_Chr7g0252971 46.199 171 78 3 8 164 5 175 8.33e-51 171
Msa0212870 MtrunA17_Chr2g0309331 50.955 157 68 4 8 158 7 160 1.44e-50 170
Msa0212870 MtrunA17_Chr2g0318081 49.398 166 74 4 6 166 11 171 4.50e-50 169
Msa0212870 MtrunA17_Chr7g0217711 57.576 132 52 2 8 136 16 146 1.35e-49 162
Msa0212870 MtrunA17_Chr5g0417791 49.351 154 73 3 10 158 2 155 1.98e-49 165
Msa0212870 MtrunA17_Chr6g0481091 47.953 171 84 3 6 172 1 170 2.75e-49 164
Msa0212870 MtrunA17_Chr7g0263931 51.572 159 62 4 8 155 8 162 3.39e-49 166
Msa0212870 MtrunA17_Chr5g0433781 48.087 183 87 4 6 184 1 179 1.37e-48 171
Msa0212870 MtrunA17_Chr3g0124761 40.476 252 116 7 8 227 4 253 1.79e-48 163
Msa0212870 MtrunA17_Chr4g0042561 47.799 159 78 3 5 158 3 161 2.24e-48 162
Msa0212870 MtrunA17_Chr2g0318101 48.485 165 71 4 8 158 12 176 4.03e-48 164
Msa0212870 MtrunA17_Chr8g0384721 41.048 229 112 7 10 225 6 224 4.37e-48 162
Msa0212870 MtrunA17_Chr7g0214071 46.196 184 74 6 8 175 12 186 1.57e-47 160
Msa0212870 MtrunA17_Chr4g0047841 43.979 191 81 4 11 175 15 205 2.04e-47 162
Msa0212870 MtrunA17_Chr6g0453131 49.390 164 72 4 11 163 15 178 1.56e-46 161
Msa0212870 MtrunA17_Chr2g0326361 48.026 152 72 3 11 155 14 165 1.55e-45 157
Msa0212870 MtrunA17_Chr8g0361731 46.199 171 80 4 7 165 10 180 1.11e-44 156
Msa0212870 MtrunA17_Chr3g0130731 50.314 159 74 4 8 162 4 161 1.31e-44 153
Msa0212870 MtrunA17_Chr5g0428991 49.689 161 66 4 10 161 24 178 9.42e-44 158
Msa0212870 MtrunA17_Chr5g0417001 45.087 173 84 4 7 168 10 182 9.97e-44 154
Msa0212870 MtrunA17_Chr3g0128151 48.750 160 67 4 11 161 22 175 1.47e-42 154
Msa0212870 MtrunA17_Chr2g0311661 36.508 252 130 7 13 234 23 274 2.14e-42 147
Msa0212870 MtrunA17_Chr5g0400461 47.024 168 74 4 6 162 1 164 4.41e-42 148
Msa0212870 MtrunA17_Chr3g0130101 49.383 162 68 6 6 158 1 157 6.67e-42 148
Msa0212870 MtrunA17_Chr3g0092671 48.701 154 68 4 13 159 7 156 2.81e-41 150
Msa0212870 MtrunA17_Chr2g0311651 38.174 241 109 8 13 225 24 252 3.27e-41 145
Msa0212870 MtrunA17_Chr4g0076731 38.306 248 130 7 13 251 56 289 3.51e-41 148
Msa0212870 MtrunA17_Chr4g0054791 47.953 171 74 6 6 164 1 168 1.20e-40 144
Msa0212870 MtrunA17_Chr5g0442771 40.094 212 93 6 13 195 20 226 1.27e-40 143
Msa0212870 MtrunA17_Chr1g0197351 47.826 161 69 4 11 159 42 199 4.92e-40 145
Msa0212870 MtrunA17_Chr3g0128111 40.000 200 104 7 14 204 45 237 6.90e-40 140
Msa0212870 MtrunA17_Chr1g0197361 47.712 153 71 4 13 159 10 159 1.92e-39 145
Msa0212870 MtrunA17_Chr8g0364791 43.671 158 82 4 6 158 1 156 1.05e-37 139
Msa0212870 MtrunA17_Chr3g0113001 44.509 173 70 5 58 217 14 173 2.15e-37 135
Msa0212870 MtrunA17_Chr8g0384201 42.767 159 82 4 6 158 1 156 1.16e-36 137
Msa0212870 MtrunA17_Chr4g0038751 43.373 166 78 5 1 158 4 161 1.54e-36 132
Msa0212870 MtrunA17_Chr1g0201021 51.181 127 58 3 13 135 21 147 2.79e-36 137
Msa0212870 MtrunA17_Chr8g0345671 45.395 152 69 5 11 155 11 155 1.03e-34 130
Msa0212870 MtrunA17_Chr3g0131911 39.877 163 85 5 9 160 12 172 4.94e-33 122
Msa0212870 MtrunA17_Chr8g0385991 38.125 160 89 5 9 160 12 169 1.46e-32 120
Msa0212870 MtrunA17_Chr8g0345691 43.421 152 72 5 11 155 12 156 3.13e-32 123
Msa0212870 MtrunA17_Chr2g0321631 41.509 159 76 7 12 156 5 160 1.73e-31 118
Msa0212870 MtrunA17_Chr3g0113031 44.304 158 65 4 72 217 3 149 1.10e-30 116
Msa0212870 MtrunA17_Chr4g0026141 38.650 163 84 6 7 156 1 160 1.38e-30 115
Msa0212870 MtrunA17_Chr2g0321741 42.276 123 61 3 35 155 17 131 2.05e-27 109
Msa0212870 MtrunA17_Chr8g0345711 39.568 139 76 4 2 133 3 140 4.96e-27 103
Msa0212870 MtrunA17_Chr4g0050701 33.690 187 103 5 1 176 1 177 1.33e-26 103
Msa0212870 MtrunA17_Chr8g0345701 41.667 144 60 6 11 133 7 147 1.13e-24 97.8
Msa0212870 MtrunA17_Chr7g0266701 31.792 173 102 5 11 167 4 176 3.68e-24 98.6
Msa0212870 MtrunA17_Chr7g0243371 46.512 86 44 1 63 146 18 103 2.20e-22 90.1
Msa0212870 MtrunA17_Chr8g0384351 35.882 170 82 8 9 175 8 153 6.86e-22 90.9
Msa0212870 MtrunA17_Chr8g0345731 39.850 133 69 6 11 133 24 155 1.71e-21 89.4
Msa0212870 MtrunA17_Chr8g0345721 34.194 155 65 5 14 132 38 191 5.78e-21 89.0
Msa0212870 MtrunA17_Chr8g0345741 38.655 119 65 4 22 133 2 119 8.99e-21 87.0
Msa0212870 MtrunA17_Chr3g0130321 31.217 189 101 7 9 178 5 183 5.73e-20 86.3
Msa0212870 MtrunA17_Chr7g0251651 27.684 177 122 4 10 182 17 191 1.89e-15 73.6
Msa0212870 MtrunA17_Chr7g0251661 27.703 148 99 5 4 146 3 147 4.15e-14 68.9
Msa0212870 MtrunA17_Chr7g0251671 27.632 152 94 5 4 146 3 147 1.39e-13 67.4
Msa0212870 MtrunA17_Chr3g0113011 59.184 49 16 2 10 55 18 65 1.18e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0212870 AT1G56010.2 60.248 322 102 10 2 305 10 323 2.86e-127 366
Msa0212870 AT3G12977.1 54.839 310 92 11 3 305 10 278 4.66e-104 305
Msa0212870 AT1G56010.1 58.712 264 84 10 58 305 2 256 7.97e-94 279
Msa0212870 AT3G12977.2 48.571 280 85 11 30 305 1 225 6.03e-72 222
Msa0212870 AT5G61430.1 51.464 239 94 7 11 232 16 249 4.22e-69 218
Msa0212870 AT3G18400.1 62.987 154 53 2 7 158 1 152 4.34e-68 215
Msa0212870 AT5G07680.2 44.850 301 136 8 11 298 3 286 2.23e-66 211
Msa0212870 AT5G07680.1 44.850 301 136 8 11 298 17 300 2.44e-66 211
Msa0212870 AT5G18270.1 60.870 161 59 3 11 167 21 181 6.59e-65 207
Msa0212870 AT5G18270.2 60.870 161 59 3 11 167 21 181 6.73e-65 207
Msa0212870 AT5G39610.1 51.643 213 91 5 4 208 9 217 6.69e-64 203
Msa0212870 AT4G28530.1 57.143 175 50 4 7 161 6 175 4.57e-63 203
Msa0212870 AT3G04060.1 46.154 247 117 6 11 243 20 264 3.77e-62 201
Msa0212870 AT1G76420.1 60.000 155 56 3 8 158 19 171 5.30e-62 200
Msa0212870 AT5G53950.1 61.635 159 56 3 11 164 17 175 6.04e-61 198
Msa0212870 AT3G29035.1 48.908 229 95 8 11 220 24 249 7.27e-61 196
Msa0212870 AT3G15170.1 48.230 226 92 5 8 220 17 230 2.14e-60 195
Msa0212870 AT2G24430.2 59.615 156 55 4 8 158 13 165 5.20e-60 194
Msa0212870 AT2G24430.1 59.615 156 55 4 8 158 13 165 5.20e-60 194
Msa0212870 AT1G71930.2 52.439 164 66 5 1 158 1 158 4.38e-56 184
Msa0212870 AT1G71930.1 52.439 164 66 5 1 158 1 158 4.38e-56 184
Msa0212870 AT1G12260.2 39.262 298 133 11 9 270 5 290 1.26e-55 184
Msa0212870 AT2G18060.3 46.465 198 93 5 6 193 4 198 3.80e-55 183
Msa0212870 AT2G18060.1 46.465 198 93 5 6 193 4 198 3.80e-55 183
Msa0212870 AT4G36160.1 54.248 153 62 3 11 158 10 159 2.94e-54 181
Msa0212870 AT4G36160.3 54.248 153 62 3 11 158 10 159 2.94e-54 181
Msa0212870 AT4G36160.2 54.248 153 62 3 11 158 14 163 3.38e-54 181
Msa0212870 AT1G12260.1 50.000 180 76 5 9 178 5 180 3.59e-54 181
Msa0212870 AT5G62380.2 56.410 156 58 4 9 158 5 156 4.14e-54 180
Msa0212870 AT5G62380.1 56.410 156 58 4 9 158 5 156 4.14e-54 180
Msa0212870 AT1G62700.1 49.206 189 80 6 9 191 5 183 3.10e-53 179
Msa0212870 AT1G62700.2 49.206 189 80 6 9 191 5 183 3.10e-53 179
Msa0212870 AT3G04070.2 50.292 171 72 3 9 166 8 178 3.12e-53 177
Msa0212870 AT4G10350.1 53.595 153 65 3 11 158 9 160 3.44e-53 177
Msa0212870 AT3G61910.1 49.704 169 68 4 8 159 8 176 2.24e-52 175
Msa0212870 AT4G27410.2 52.258 155 71 2 6 158 9 162 4.56e-52 173
Msa0212870 AT2G46770.1 49.405 168 68 3 8 158 13 180 5.29e-52 175
Msa0212870 AT1G33280.1 51.875 160 68 3 4 158 1 156 5.42e-52 173
Msa0212870 AT1G54330.1 56.098 164 64 4 6 165 1 160 1.82e-51 172
Msa0212870 AT5G66300.1 50.617 162 69 4 11 165 12 169 4.68e-51 170
Msa0212870 AT3G04070.1 45.989 187 72 3 9 166 8 194 9.91e-51 171
Msa0212870 AT3G17730.1 52.532 158 70 3 6 159 1 157 2.06e-50 167
Msa0212870 AT3G15500.1 49.697 165 73 4 6 165 9 168 9.53e-50 168
Msa0212870 AT1G79580.3 50.955 157 67 4 8 158 14 166 1.57e-49 169
Msa0212870 AT1G79580.5 50.955 157 67 4 8 158 14 166 1.57e-49 169
Msa0212870 AT1G79580.4 50.955 157 67 4 8 158 14 166 1.57e-49 169
Msa0212870 AT1G79580.2 50.955 157 67 4 8 158 14 166 1.57e-49 169
Msa0212870 AT1G79580.1 50.955 157 67 4 8 158 14 166 1.57e-49 169
Msa0212870 AT5G17260.1 50.955 157 73 2 6 158 1 157 2.30e-49 171
Msa0212870 AT1G52890.1 49.697 165 73 4 6 165 9 168 3.15e-49 166
Msa0212870 AT5G61430.2 50.000 190 75 6 58 232 2 186 3.45e-49 165
Msa0212870 AT3G03200.1 48.256 172 84 3 6 173 1 171 5.67e-49 170
Msa0212870 AT1G32770.1 38.934 244 127 8 8 229 13 256 7.97e-49 166
Msa0212870 AT1G65910.1 52.229 157 70 3 6 158 1 156 2.14e-48 171
Msa0212870 AT4G27410.3 47.093 172 71 3 6 158 9 179 1.30e-47 162
Msa0212870 AT4G35580.1 51.497 167 64 5 1 158 1 159 1.31e-47 167
Msa0212870 AT1G01720.1 38.760 258 125 8 10 243 6 254 1.37e-47 161
Msa0212870 AT4G35580.3 51.497 167 64 5 1 158 1 159 1.49e-47 167
Msa0212870 AT1G61110.1 45.405 185 78 6 2 169 7 185 1.51e-47 162
Msa0212870 AT4G35580.2 51.497 167 64 5 1 158 1 159 1.53e-47 167
Msa0212870 AT1G69490.1 47.799 159 72 3 8 158 6 161 1.27e-46 158
Msa0212870 AT5G08790.1 48.408 157 74 3 8 158 4 159 7.46e-46 157
Msa0212870 AT5G63790.1 48.101 158 75 3 7 158 46 202 2.64e-45 156
Msa0212870 AT5G63790.2 48.101 158 75 3 7 158 56 212 2.65e-45 156
Msa0212870 AT3G10490.1 50.602 166 75 4 7 168 23 185 3.47e-45 154
Msa0212870 AT1G77450.1 47.468 158 78 3 5 158 4 160 4.67e-45 154
Msa0212870 AT5G39820.1 44.149 188 81 6 2 165 11 198 5.92e-45 156
Msa0212870 AT3G10480.1 47.027 185 84 5 11 184 27 208 2.86e-44 157
Msa0212870 AT5G46590.1 47.561 164 80 4 6 164 1 163 8.18e-44 152
Msa0212870 AT3G10490.2 51.592 157 72 3 7 159 23 179 9.86e-44 155
Msa0212870 AT1G26870.1 41.584 202 77 5 7 190 12 190 2.14e-43 154
Msa0212870 AT5G13180.1 45.029 171 74 6 1 160 1 162 2.15e-43 149
Msa0212870 AT2G33480.1 49.020 153 72 4 10 160 14 162 3.66e-43 149
Msa0212870 AT2G43000.1 42.703 185 100 3 8 187 16 199 4.12e-43 149
Msa0212870 AT2G33480.2 49.673 153 69 4 10 160 14 160 4.25e-43 149
Msa0212870 AT3G10480.2 47.027 185 83 6 11 184 27 207 4.87e-43 153
Msa0212870 AT5G04410.1 50.327 153 71 4 11 159 9 160 6.92e-43 155
Msa0212870 AT3G15510.1 47.170 159 70 4 15 159 21 179 8.30e-43 151
Msa0212870 AT1G32510.1 47.368 171 79 3 6 165 1 171 9.09e-43 149
Msa0212870 AT3G10500.1 49.673 153 72 4 11 159 9 160 1.02e-42 154
Msa0212870 AT1G33060.1 47.799 159 64 4 11 158 24 174 1.70e-42 155
Msa0212870 AT1G33060.2 47.799 159 64 4 11 158 24 174 1.85e-42 155
Msa0212870 AT4G17980.1 44.149 188 91 5 6 179 1 188 2.55e-42 147
Msa0212870 AT4G17980.2 44.149 188 91 5 6 179 1 188 3.37e-42 147
Msa0212870 AT2G02450.1 48.993 149 70 4 13 158 53 198 1.32e-41 148
Msa0212870 AT2G02450.2 49.660 147 68 4 13 156 53 196 1.37e-41 149
Msa0212870 AT5G46590.2 50.746 134 61 3 6 134 1 134 2.48e-41 145
Msa0212870 AT1G52880.1 46.108 167 71 4 15 165 21 184 1.44e-40 144
Msa0212870 AT3G10480.3 41.284 218 81 6 11 184 27 241 1.83e-40 148
Msa0212870 AT5G24590.2 44.324 185 94 6 9 186 11 193 1.22e-39 144
Msa0212870 AT2G17040.1 45.695 151 71 3 13 158 8 152 1.46e-37 135
Msa0212870 AT3G12910.1 45.062 162 70 5 13 156 23 183 3.51e-37 134
Msa0212870 AT4G28530.2 42.197 173 42 4 7 161 6 138 5.21e-37 134
Msa0212870 AT5G09330.5 41.139 158 88 3 6 159 1 157 1.62e-36 137
Msa0212870 AT5G09330.2 41.139 158 88 3 6 159 1 157 1.62e-36 137
Msa0212870 AT5G09330.4 41.139 158 88 3 6 159 1 157 1.62e-36 137
Msa0212870 AT5G09330.3 41.139 158 88 3 6 159 1 157 1.62e-36 137
Msa0212870 AT5G09330.1 41.139 158 88 3 6 159 1 157 1.62e-36 137
Msa0212870 AT3G49530.2 43.312 157 83 5 11 162 13 168 1.91e-36 135
Msa0212870 AT2G27300.1 40.000 180 93 6 2 175 5 175 2.05e-36 133
Msa0212870 AT3G49530.1 43.312 157 83 5 11 162 13 168 5.53e-36 135
Msa0212870 AT1G34180.3 44.079 152 76 4 13 158 18 166 5.54e-36 134
Msa0212870 AT1G34180.1 43.791 153 77 4 13 159 18 167 2.06e-35 134
Msa0212870 AT4G10350.2 57.895 95 39 1 64 158 20 113 9.17e-35 128
Msa0212870 AT1G34190.1 48.031 127 62 2 13 135 18 144 1.45e-34 132
Msa0212870 AT5G64060.1 40.506 158 89 3 6 159 1 157 2.17e-34 128
Msa0212870 AT1G34180.4 41.463 164 75 5 13 158 18 178 4.72e-34 129
Msa0212870 AT1G34180.2 41.212 165 76 5 13 159 18 179 1.36e-33 129
Msa0212870 AT5G22290.1 39.375 160 86 4 5 161 15 166 3.29e-33 125
Msa0212870 AT3G44290.2 41.096 146 75 3 13 155 16 153 2.50e-32 120
Msa0212870 AT3G44290.1 41.096 146 75 3 13 155 16 153 1.65e-31 120
Msa0212870 AT1G32870.2 41.143 175 94 4 3 173 2 171 6.20e-31 122
Msa0212870 AT1G32870.1 41.143 175 94 4 3 173 2 171 7.16e-31 121
Msa0212870 AT1G32870.3 41.143 175 94 4 3 173 38 207 1.12e-30 121
Msa0212870 AT5G04395.1 41.216 148 69 3 5 134 22 169 2.10e-29 111
Msa0212870 AT2G33480.3 50.515 97 47 1 64 160 10 105 5.66e-28 108
Msa0212870 AT1G02230.1 31.064 235 143 6 12 237 4 228 2.62e-27 109
Msa0212870 AT3G04420.2 32.474 194 115 5 12 197 4 189 8.72e-25 101
Msa0212870 AT5G22380.1 37.908 153 85 6 14 156 8 160 9.50e-25 100
Msa0212870 AT2G18060.2 43.750 112 55 3 87 193 2 110 2.48e-24 100
Msa0212870 AT3G04420.1 30.000 240 137 8 12 233 4 230 2.50e-24 101
Msa0212870 AT3G44350.2 34.177 158 96 4 10 159 4 161 3.18e-24 99.0
Msa0212870 AT4G01520.1 34.659 176 93 8 10 171 3 170 2.86e-23 97.8
Msa0212870 AT4G01550.1 36.306 157 84 7 14 161 7 156 5.58e-23 99.0
Msa0212870 AT5G64530.2 38.462 130 60 5 11 134 3 118 1.41e-22 92.4
Msa0212870 AT5G64530.1 33.526 173 72 7 11 159 3 156 2.11e-22 92.8
Msa0212870 AT3G10490.4 56.410 78 34 0 82 159 2 79 3.21e-22 95.5
Msa0212870 AT3G10490.3 56.410 78 34 0 82 159 2 79 3.21e-22 95.5
Msa0212870 AT3G44350.1 37.879 132 74 4 10 133 4 135 3.62e-22 91.3
Msa0212870 AT4G01540.4 33.526 173 91 8 14 171 7 170 5.09e-22 95.5
Msa0212870 AT4G01540.2 33.526 173 91 8 14 171 7 170 8.34e-22 95.1
Msa0212870 AT4G01540.3 33.526 173 91 8 14 171 7 170 8.38e-22 95.1
Msa0212870 AT4G01540.1 33.526 173 91 8 14 171 7 170 1.04e-21 95.5
Msa0212870 AT2G43000.2 39.167 120 70 1 71 187 2 121 2.75e-21 89.7
Msa0212870 AT1G02250.1 31.925 213 119 10 12 210 4 204 9.17e-20 89.0
Msa0212870 AT1G02220.1 36.719 128 70 4 12 132 4 127 1.16e-19 89.0
Msa0212870 AT5G50820.1 36.923 130 70 4 10 134 16 138 2.56e-18 81.6
Msa0212870 AT1G01010.1 31.447 159 87 6 14 158 6 156 1.75e-16 79.7
Msa0212870 AT5G14000.2 33.588 131 81 3 10 136 14 142 2.37e-15 72.8
Msa0212870 AT5G22290.2 44.595 74 33 2 88 161 2 67 2.24e-14 71.6
Msa0212870 AT5G14000.1 31.788 151 93 5 10 156 14 158 2.42e-14 70.9
Msa0212870 AT3G56530.1 26.582 158 106 4 5 156 46 199 4.06e-14 72.0
Msa0212870 AT3G55210.1 27.168 173 103 5 1 156 1 167 8.16e-14 70.9
Msa0212870 AT3G04430.1 30.201 149 89 4 17 150 6 154 5.56e-13 67.0

Find 106 sgRNAs with CRISPR-Local

Find 306 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCATCACTTCCAGCATTAA+TGG 0.146600 2_1:+55157384 Msa0212870:CDS
TTTCCCTAAGTTAAAGAAAT+TGG 0.197910 2_1:+55157816 Msa0212870:three_prime_UTR
ATTAATGATCAAAACCTAAA+AGG 0.212913 2_1:+55157670 Msa0212870:CDS
GAAAGATGGGGCTTTGTAAT+TGG 0.225285 2_1:+55158110 Msa0212870:three_prime_UTR
TCCTAAAATTTCATCTTCTA+AGG 0.243571 2_1:+55156299 Msa0212870:CDS
GTTCCATATTGGTTGTTATA+TGG 0.295352 2_1:-55157510 None:intergenic
GTGCAACTGCATCAGGTTAT+TGG 0.304123 2_1:+55156127 Msa0212870:CDS
TTGTTGGCTAGAGGTAATTT+TGG 0.309334 2_1:-55157532 None:intergenic
CAACCATATAACAACCAATA+TGG 0.320797 2_1:+55157507 Msa0212870:CDS
GTAGCCCTGTTGCATATTTA+CGG 0.328714 2_1:-55156095 None:intergenic
ACTTGCATTGTTGTTATTGT+TGG 0.333988 2_1:-55157548 None:intergenic
AATCATCTACCGTTGTAATA+TGG 0.342585 2_1:+55157906 Msa0212870:three_prime_UTR
AACAACAATGCAAGTACATT+TGG 0.349859 2_1:+55157556 Msa0212870:CDS
TGATCCAATTTCTTTAACTT+AGG 0.363392 2_1:-55157820 None:intergenic
CACAACAAGAAAATTTAAAT+AGG 0.369872 2_1:-55157791 None:intergenic
CTTCGTAAGGGCACTCTTGT+TGG 0.373702 2_1:+55156177 Msa0212870:CDS
GATAAAGGGTCTAAGCTATA+AGG 0.378533 2_1:-55157586 None:intergenic
GATCCAATTTCTTTAACTTA+GGG 0.379400 2_1:-55157819 None:intergenic
GGTTGTAGATTGGGTTGGTT+TGG 0.395494 2_1:-55157489 None:intergenic
TTGTTATATGGTTGTAGATT+GGG 0.402170 2_1:-55157498 None:intergenic
GTTGTTATATGGTTGTAGAT+TGG 0.403136 2_1:-55157499 None:intergenic
GCTGCGACGTTAGAGGATTC+AGG 0.408854 2_1:+55157862 Msa0212870:three_prime_UTR
AGAGACCGTAAATATGCAAC+AGG 0.409929 2_1:+55156090 Msa0212870:CDS
TTGTGTATATACAGGAAGAT+TGG 0.410383 2_1:+55157278 Msa0212870:intron
TTGTTAAAATAGATCATTGT+GGG 0.422066 2_1:+55158190 Msa0212870:three_prime_UTR
ATGTGGTGCTGCGACGTTAG+AGG 0.423811 2_1:+55157855 Msa0212870:three_prime_UTR
TGTGTATATACAGGAAGATT+GGG 0.427064 2_1:+55157279 Msa0212870:intron
TGTGAGCCATGGGATATTCC+TGG 0.431452 2_1:+55153016 Msa0212870:CDS
TTTGAGTCAACTATCAAAGA+TGG 0.431620 2_1:+55157636 Msa0212870:CDS
GCCCCATCTTTCTAATATAC+CGG 0.433813 2_1:-55158099 None:intergenic
TTGAGAAAACATGGAGAAGC+AGG 0.435570 2_1:-55157464 None:intergenic
TTAATGATCAAAACCTAAAA+GGG 0.436538 2_1:+55157671 Msa0212870:CDS
CCCATGGCTCACACTTGTTA+AGG 0.440925 2_1:-55153006 None:intergenic
ACAAATCGTGCAACTGCATC+AGG 0.442887 2_1:+55156120 Msa0212870:CDS
CTTGCTCATATTCATCTGTA+TGG 0.443475 2_1:-55157438 None:intergenic
ATGCATGAGTTTCGTATTGA+GGG 0.459420 2_1:+55156264 Msa0212870:CDS
TCAGGTTATTGGAAGGCAAC+AGG 0.459668 2_1:+55156138 Msa0212870:CDS
ATCAAGGAAGGGCACCTAAA+GGG 0.466310 2_1:+55156223 Msa0212870:CDS
GTCCCGGTATATTAGAAAGA+TGG 0.472841 2_1:+55158096 Msa0212870:three_prime_UTR
AGGATCCAATTTCGATGAAA+AGG 0.474863 2_1:+55157943 Msa0212870:three_prime_UTR
AAGACTTTAGTGTTCTATCA+AGG 0.477018 2_1:+55156207 Msa0212870:CDS
TCCCGGTATATTAGAAAGAT+GGG 0.477592 2_1:+55158097 Msa0212870:three_prime_UTR
TATGCATGAGTTTCGTATTG+AGG 0.481434 2_1:+55156263 Msa0212870:CDS
GTCAACATCAATCATGAGAA+AGG 0.483380 2_1:-55152984 None:intergenic
GGAATTAATTATAGAGAAGG+TGG 0.494514 2_1:-55152778 None:intergenic
TGCTACAAAACCTCCAAGCA+TGG 0.497760 2_1:+55157336 Msa0212870:CDS
TGAGAGTTACTTATCTGAAG+TGG 0.505837 2_1:+55157723 Msa0212870:CDS
CATCTGTATGGAATTGAGCT+TGG 0.508894 2_1:-55157426 None:intergenic
AAAGGGTCATCACCAAGCTT+AGG 0.523339 2_1:+55157688 Msa0212870:CDS
TTTCGTATTGAGGGTCCTCA+TGG 0.526305 2_1:+55156273 Msa0212870:CDS
CTTTAGTGTTCTATCAAGGA+AGG 0.528388 2_1:+55156211 Msa0212870:CDS
AACAATGCAAGTACATTTGG+AGG 0.528454 2_1:+55157559 Msa0212870:CDS
GGACAGAGCTATCCTTCGTA+AGG 0.530042 2_1:+55156164 Msa0212870:CDS
GACGTTAGAGGATTCAGGTC+CGG 0.531360 2_1:+55157867 Msa0212870:three_prime_UTR
GATGGAATTAATTATAGAGA+AGG 0.531426 2_1:-55152781 None:intergenic
ATGTAAGAATCCATTAATGC+TGG 0.533005 2_1:-55157394 None:intergenic
TCATAGCAACTACCCATGCT+TGG 0.533828 2_1:-55157349 None:intergenic
TATCAAGGAAGGGCACCTAA+AGG 0.534747 2_1:+55156222 Msa0212870:CDS
GAACTTCCTTCACCTAAGCT+TGG 0.537127 2_1:-55157700 None:intergenic
CCTTAACAAGTGTGAGCCAT+GGG 0.539747 2_1:+55153006 Msa0212870:CDS
CACACAAGCTCTTCATCTCT+AGG 0.541777 2_1:-55152926 None:intergenic
GAGAGTTACTTATCTGAAGT+GGG 0.543393 2_1:+55157724 Msa0212870:CDS
GATTCAGGTCCGGATTGAAA+AGG 0.545804 2_1:+55157877 Msa0212870:three_prime_UTR
TAGCAACTACCCATGCTTGG+AGG 0.547765 2_1:-55157346 None:intergenic
TATATGGTTGTAGATTGGGT+TGG 0.552281 2_1:-55157494 None:intergenic
GAGTAACATAAGCATGGTTG+AGG 0.554745 2_1:+55152874 Msa0212870:CDS
CCCCATCTTTCTAATATACC+GGG 0.556445 2_1:-55158098 None:intergenic
CCAATTTAAAAGTGAAACAA+TGG 0.564555 2_1:+55158213 Msa0212870:three_prime_UTR
TTAGAAATTGTTCCACATGT+GGG 0.570954 2_1:-55157752 None:intergenic
TAGAAATTGTTCCACATGTG+GGG 0.571008 2_1:-55157751 None:intergenic
ATTAGAAATTGTTCCACATG+TGG 0.572291 2_1:-55157753 None:intergenic
CAAGAAAATTTAAATAGGAG+TGG 0.577377 2_1:-55157786 None:intergenic
TATAACATGATTTAAAACAA+TGG 0.578918 2_1:-55158011 None:intergenic
TCTATCCACATGATATGTCC+CGG 0.579561 2_1:+55158080 Msa0212870:three_prime_UTR
ACCTTAACAAGTGTGAGCCA+TGG 0.592225 2_1:+55153005 Msa0212870:CDS
ATGTGGAACAATTTCTAATG+TGG 0.595031 2_1:+55157757 Msa0212870:exon
ATTAATTATAGAGAAGGTGG+AGG 0.598614 2_1:-55152775 None:intergenic
GCTACAAAACCTCCAAGCAT+GGG 0.600781 2_1:+55157337 Msa0212870:CDS
GTTGAGGCAAAGCTACCACC+AGG 0.601916 2_1:+55152890 Msa0212870:CDS
GTGTGATTACTTGATGAAGA+AGG 0.603211 2_1:+55152946 Msa0212870:CDS
CATGTGTGGGAGGGAAAGAG+TGG 0.608228 2_1:+55156052 Msa0212870:CDS
CAGAAGCAGCATGTGTGGGA+GGG 0.608897 2_1:+55156043 Msa0212870:intron
TTTAGTGTTCTATCAAGGAA+GGG 0.615096 2_1:+55156212 Msa0212870:CDS
TTATTGGAAGGCAACAGGAA+AGG 0.621123 2_1:+55156143 Msa0212870:CDS
TACTAACCAGGAATATCCCA+TGG 0.624451 2_1:-55153022 None:intergenic
ATATGGTGCTGAAGCTGTAG+AGG 0.625759 2_1:+55157923 Msa0212870:three_prime_UTR
TCATCACCAAGCTTAGGTGA+AGG 0.632923 2_1:+55157694 Msa0212870:CDS
AACTGCATCAGGTTATTGGA+AGG 0.632925 2_1:+55156131 Msa0212870:CDS
GACAGAGCTATCCTTCGTAA+GGG 0.632999 2_1:+55156165 Msa0212870:CDS
TTTGTTAAAATAGATCATTG+TGG 0.638660 2_1:+55158189 Msa0212870:three_prime_UTR
TTGTTGTTATTGTTGGCTAG+AGG 0.638919 2_1:-55157541 None:intergenic
TGAGAAAACATGGAGAAGCA+GGG 0.639023 2_1:-55157463 None:intergenic
TGGTGCAGAAGCAGCATGTG+TGG 0.642823 2_1:+55156038 Msa0212870:intron
GCAGAAGCAGCATGTGTGGG+AGG 0.644425 2_1:+55156042 Msa0212870:intron
AAGTGGGCATGCCCCACATG+TGG 0.648213 2_1:+55157740 Msa0212870:CDS
CTAGGATGAAATCTGAACCC+TGG 0.649291 2_1:-55152908 None:intergenic
CAACAAGAGTGCCCTTACGA+AGG 0.654867 2_1:-55156176 None:intergenic
ATATACCGGGACATATCATG+TGG 0.657333 2_1:-55158085 None:intergenic
GGTAGTTGCTATGATGACAC+AGG 0.669164 2_1:+55157358 Msa0212870:CDS
CCCGGTATATTAGAAAGATG+GGG 0.684881 2_1:+55158098 Msa0212870:three_prime_UTR
GATCATCTGCATCTAAAATG+TGG 0.685018 2_1:+55157838 Msa0212870:three_prime_UTR
GGTGCAGAAGCAGCATGTGT+GGG 0.686440 2_1:+55156039 Msa0212870:intron
GGATGAAATCTGAACCCTGG+TGG 0.692300 2_1:-55152905 None:intergenic
GCTTCAGCACCATATTACAA+CGG 0.738936 2_1:-55157915 None:intergenic
GAGACCGTAAATATGCAACA+GGG 0.752701 2_1:+55156091 Msa0212870:CDS
TTGAGGCAAAGCTACCACCA+GGG 0.776299 2_1:+55152891 Msa0212870:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAATAAATAAAAATATAT+TGG + chr2_1:55154060-55154079 Msa0212870:intron 0.0%
!!! TTTTTTTTATAAATAAATAA+TGG - chr2_1:55154157-55154176 None:intergenic 0.0%
!!! TTCTTTATTAAATTTTGATA+AGG + chr2_1:55153355-55153374 Msa0212870:intron 10.0%
!!! TCTTTATTAAATTTTGATAA+GGG + chr2_1:55153356-55153375 Msa0212870:intron 10.0%
!! GATAAAAAAAATTATATCAT+CGG - chr2_1:55154793-55154812 None:intergenic 10.0%
!!! ATTTTTTTTTATATCAACAA+GGG + chr2_1:55155080-55155099 Msa0212870:intron 10.0%
!! CAAAAAAAATATATATCAAA+TGG - chr2_1:55155825-55155844 None:intergenic 10.0%
!!! ACAAATAGTTTTTTTTTAAA+GGG - chr2_1:55155898-55155917 None:intergenic 10.0%
!!! AACAAATAGTTTTTTTTTAA+AGG - chr2_1:55155899-55155918 None:intergenic 10.0%
!! TTTACACTAATTAATTATAT+TGG + chr2_1:55156518-55156537 Msa0212870:intron 10.0%
!!! TTGTGTTTAAAATATTTATA+AGG + chr2_1:55156897-55156916 Msa0212870:intron 10.0%
!!! TTTTTTTTCTAACAAAGATA+TGG - chr2_1:55152853-55152872 None:intergenic 15.0%
!!! AAATTTTCTCATAAAGAAAT+AGG + chr2_1:55153150-55153169 Msa0212870:intron 15.0%
!!! GTTAATTTAATTTCCAATTA+AGG + chr2_1:55153509-55153528 Msa0212870:intron 15.0%
!! AAGACAGAAAAAAATAAATT+TGG + chr2_1:55153771-55153790 Msa0212870:intron 15.0%
!! TACATACATAAATATGTAAA+TGG + chr2_1:55154866-55154885 Msa0212870:intron 15.0%
!! AAGATATAAAATAATACAAG+TGG - chr2_1:55154963-55154982 None:intergenic 15.0%
!!! TGTATTATTTTATATCTTCA+AGG + chr2_1:55154965-55154984 Msa0212870:intron 15.0%
!! TTTGTCAATTTAAATAGTTA+TGG + chr2_1:55155057-55155076 Msa0212870:intron 15.0%
!!! GATTTTTTTTTATATCAACA+AGG + chr2_1:55155079-55155098 Msa0212870:intron 15.0%
!! AGTTATTATAGATCAATAAA+AGG - chr2_1:55155729-55155748 None:intergenic 15.0%
!!! ATTAATGTAATGGAAATATA+TGG + chr2_1:55156018-55156037 Msa0212870:intron 15.0%
!! ATTAATTAGTGTAAAGAAAA+TGG - chr2_1:55156513-55156532 None:intergenic 15.0%
!! AGATTGACAAATAAAAATTA+AGG + chr2_1:55156631-55156650 Msa0212870:intron 15.0%
!! ACCATATATGTTAAATTAAA+TGG + chr2_1:55157043-55157062 Msa0212870:intron 15.0%
!!! ACCATTTAATTTAACATATA+TGG - chr2_1:55157047-55157066 None:intergenic 15.0%
!!! TATAACATGATTTAAAACAA+TGG - chr2_1:55158014-55158033 None:intergenic 15.0%
!!! AAGTGAGAAATTTTTTAAGA+TGG - chr2_1:55152802-55152821 None:intergenic 20.0%
!!! ATTTAATTTCCAATTAAGGT+AGG + chr2_1:55153513-55153532 Msa0212870:intron 20.0%
!! ATACTTAGGATAAAATACAT+TGG + chr2_1:55154098-55154117 Msa0212870:intron 20.0%
!! ACTATCAAAGTCTTTATAAT+AGG - chr2_1:55154383-55154402 None:intergenic 20.0%
!! CTTTCTAAACACAAATATAA+TGG - chr2_1:55154674-55154693 None:intergenic 20.0%
!!! TTTAATTTGTATGCACAAAT+AGG - chr2_1:55154927-55154946 None:intergenic 20.0%
!!! AAGAGTAAAATTTTTTTTGC+TGG - chr2_1:55154991-55155010 None:intergenic 20.0%
!! ATAATTAAACTACAAACACA+TGG - chr2_1:55155164-55155183 None:intergenic 20.0%
!! ATAAAATCCAAAACTAGTTA+TGG - chr2_1:55155223-55155242 None:intergenic 20.0%
!! AAATGAAAAAGAAACTGTTA+GGG + chr2_1:55155260-55155279 Msa0212870:intron 20.0%
!! TGTTCTAATAATTAAGACAA+AGG + chr2_1:55155431-55155450 Msa0212870:intron 20.0%
!! ATATATATCAAATGGAACAT+GGG - chr2_1:55155817-55155836 None:intergenic 20.0%
!! AATATATATCAAATGGAACA+TGG - chr2_1:55155818-55155837 None:intergenic 20.0%
!! TCTTAGTCTAATTAATGTAA+TGG + chr2_1:55156008-55156027 Msa0212870:intron 20.0%
!!! TATTTCTTTCTCCTTTAAAA+AGG - chr2_1:55156407-55156426 None:intergenic 20.0%
!!! CATTTTGCAACATATTTTTT+TGG + chr2_1:55156561-55156580 Msa0212870:intron 20.0%
!! ATGTGACTTCAAAAATATAT+TGG + chr2_1:55156725-55156744 Msa0212870:intron 20.0%
!! TGTGACTTCAAAAATATATT+GGG + chr2_1:55156726-55156745 Msa0212870:intron 20.0%
!! GTTTAATAAAAAATTCAGAG+AGG - chr2_1:55156770-55156789 None:intergenic 20.0%
!! TTATCCAATCAAATATCAAA+AGG - chr2_1:55156855-55156874 None:intergenic 20.0%
!! TTCGTTAATTGTTAACTATT+CGG - chr2_1:55157144-55157163 None:intergenic 20.0%
!!! TTAGGTTTTGATCATTAATA+GGG - chr2_1:55157669-55157688 None:intergenic 20.0%
!!! TTTAGGTTTTGATCATTAAT+AGG - chr2_1:55157670-55157689 None:intergenic 20.0%
!! ATTAATGATCAAAACCTAAA+AGG + chr2_1:55157670-55157689 Msa0212870:CDS 20.0%
!! TTAATGATCAAAACCTAAAA+GGG + chr2_1:55157671-55157690 Msa0212870:CDS 20.0%
!! CACAACAAGAAAATTTAAAT+AGG - chr2_1:55157794-55157813 None:intergenic 20.0%
!!! CTATTTAAATTTTCTTGTTG+TGG + chr2_1:55157792-55157811 Msa0212870:three_prime_UTR 20.0%
!!! GTATCTATATATTTTTGTCA+TGG + chr2_1:55158034-55158053 Msa0212870:three_prime_UTR 20.0%
!!! AATTTGTAGTTCATTTTAGT+TGG + chr2_1:55158141-55158160 Msa0212870:three_prime_UTR 20.0%
!! TTTGTTAAAATAGATCATTG+TGG + chr2_1:55158189-55158208 Msa0212870:three_prime_UTR 20.0%
!! TTGTTAAAATAGATCATTGT+GGG + chr2_1:55158190-55158209 Msa0212870:three_prime_UTR 20.0%
! GATGGAATTAATTATAGAGA+AGG - chr2_1:55152784-55152803 None:intergenic 25.0%
! AAAAATGAGTAACATAAGCA+TGG + chr2_1:55152868-55152887 Msa0212870:exon 25.0%
! AACATGTCATGTGTATATAA+AGG - chr2_1:55153094-55153113 None:intergenic 25.0%
! ATAGCAAACTGAAAAATTGA+TGG - chr2_1:55153220-55153239 None:intergenic 25.0%
! ACTCATTTGTACTTTATCAA+TGG - chr2_1:55153245-55153264 None:intergenic 25.0%
! AGTATATATCAGTTTCCATT+AGG - chr2_1:55153683-55153702 None:intergenic 25.0%
! GACAAAAATCATCTCAAATT+TGG - chr2_1:55153800-55153819 None:intergenic 25.0%
!!! TCGATCTAATTTTTTCACAA+AGG - chr2_1:55153888-55153907 None:intergenic 25.0%
!!! AGCCTTTGTATTTTAATGTA+TGG + chr2_1:55153960-55153979 Msa0212870:intron 25.0%
! TGCCATACATTAAAATACAA+AGG - chr2_1:55153965-55153984 None:intergenic 25.0%
!!! TTGTATTTTAATGTATGGCA+TGG + chr2_1:55153965-55153984 Msa0212870:intron 25.0%
! TATTATTAATTCCTAATCCC+AGG + chr2_1:55153989-55154008 Msa0212870:intron 25.0%
! TATCTCTATTATATATGCCT+GGG - chr2_1:55154009-55154028 None:intergenic 25.0%
! CATATATAATAGAGATAGGT+AGG + chr2_1:55154012-55154031 Msa0212870:intron 25.0%
! TGCATACAAATTAAATCCAA+TGG + chr2_1:55154932-55154951 Msa0212870:intron 25.0%
!!! TTTTTTAGGCTTGATATGAT+AGG + chr2_1:55155111-55155130 Msa0212870:intron 25.0%
!! TACTGAAGCTTTTATAAAGT+AGG + chr2_1:55155138-55155157 Msa0212870:intron 25.0%
! GAAATGAAAAAGAAACTGTT+AGG + chr2_1:55155259-55155278 Msa0212870:intron 25.0%
! AATGAAAAAGAAACTGTTAG+GGG + chr2_1:55155261-55155280 Msa0212870:intron 25.0%
!!! ATTTTGTTTGTGTCAAAACA+GGG - chr2_1:55155405-55155424 None:intergenic 25.0%
!!! AATTTTGTTTGTGTCAAAAC+AGG - chr2_1:55155406-55155425 None:intergenic 25.0%
!! CAGGATAATTTTTGTTAATG+AGG + chr2_1:55155496-55155515 Msa0212870:intron 25.0%
!! TTTTTGTTAATGAGGACAAT+TGG + chr2_1:55155504-55155523 Msa0212870:intron 25.0%
! ATGTGAATTTAAGTAAGATG+AGG - chr2_1:55155761-55155780 None:intergenic 25.0%
!!! TAGAAGATGAAATTTTAGGA+GGG - chr2_1:55156299-55156318 None:intergenic 25.0%
!! TTAGAAGATGAAATTTTAGG+AGG - chr2_1:55156300-55156319 None:intergenic 25.0%
! TCCTAAAATTTCATCTTCTA+AGG + chr2_1:55156299-55156318 Msa0212870:CDS 25.0%
!! ACCTTAGAAGATGAAATTTT+AGG - chr2_1:55156303-55156322 None:intergenic 25.0%
!! TTTTGGACAAAAATGACTAT+AGG + chr2_1:55156475-55156494 Msa0212870:intron 25.0%
! TTTGGACAAAAATGACTATA+GGG + chr2_1:55156476-55156495 Msa0212870:intron 25.0%
!!! ATTAAGGACTTTTGACTTTT+TGG + chr2_1:55156647-55156666 Msa0212870:intron 25.0%
!!! CTGTTATTTGTTTTGTAGAT+AGG - chr2_1:55156825-55156844 None:intergenic 25.0%
!! AAGACCTTTTGATATTTGAT+TGG + chr2_1:55156848-55156867 Msa0212870:intron 25.0%
! TGATATTTGATTGGATAACT+CGG + chr2_1:55156857-55156876 Msa0212870:intron 25.0%
! GTTATTCAATCAAAATCGAT+CGG + chr2_1:55156936-55156955 Msa0212870:intron 25.0%
! GTTAAATTGGTTGGAAAATT+CGG - chr2_1:55157076-55157095 None:intergenic 25.0%
! GTTTGAACTTAGAGTTAAAT+TGG - chr2_1:55157089-55157108 None:intergenic 25.0%
! TTAATTGTTAACTATTCGGA+GGG - chr2_1:55157140-55157159 None:intergenic 25.0%
! TTGTTATATGGTTGTAGATT+GGG - chr2_1:55157501-55157520 None:intergenic 25.0%
!! CTTTTCTATCACATGATAAA+GGG - chr2_1:55157603-55157622 None:intergenic 25.0%
!! ACTTTTCTATCACATGATAA+AGG - chr2_1:55157604-55157623 None:intergenic 25.0%
! CAAGAAAATTTAAATAGGAG+TGG - chr2_1:55157789-55157808 None:intergenic 25.0%
! TTTCCCTAAGTTAAAGAAAT+TGG + chr2_1:55157816-55157835 Msa0212870:three_prime_UTR 25.0%
!! GATCCAATTTCTTTAACTTA+GGG - chr2_1:55157822-55157841 None:intergenic 25.0%
!! TGATCCAATTTCTTTAACTT+AGG - chr2_1:55157823-55157842 None:intergenic 25.0%
!!! CCATTGTTTCACTTTTAAAT+TGG - chr2_1:55158216-55158235 None:intergenic 25.0%
! CCAATTTAAAAGTGAAACAA+TGG + chr2_1:55158213-55158232 Msa0212870:three_prime_UTR 25.0%
GGAATTAATTATAGAGAAGG+TGG - chr2_1:55152781-55152800 None:intergenic 30.0%
! AAGGAATGCATGATAATGAA+GGG - chr2_1:55153075-55153094 None:intergenic 30.0%
! AAAGGAATGCATGATAATGA+AGG - chr2_1:55153076-55153095 None:intergenic 30.0%
!! ATTTTGATAAGGGTAGATTG+AGG + chr2_1:55153366-55153385 Msa0212870:intron 30.0%
AGATTATAGCCTACCTTAAT+TGG - chr2_1:55153525-55153544 None:intergenic 30.0%
GTTCAAGGATCAAAAGATTA+TGG - chr2_1:55153605-55153624 None:intergenic 30.0%
! ATCTTTTGATCCTTGAACAA+TGG + chr2_1:55153607-55153626 Msa0212870:intron 30.0%
TGATAAATGAAAGAGCCTAA+TGG + chr2_1:55153665-55153684 Msa0212870:intron 30.0%
TAGCTACGAAAATTTAGAGA+CGG - chr2_1:55153828-55153847 None:intergenic 30.0%
!!! TCCAATCTGCATTTTTTATG+TGG + chr2_1:55153921-55153940 Msa0212870:intron 30.0%
!!! CCAATCTGCATTTTTTATGT+GGG + chr2_1:55153922-55153941 Msa0212870:intron 30.0%
TATTATATATGCCTGGGATT+AGG - chr2_1:55154003-55154022 None:intergenic 30.0%
CTATCTCTATTATATATGCC+TGG - chr2_1:55154010-55154029 None:intergenic 30.0%
CAGGCATATATAATAGAGAT+AGG + chr2_1:55154008-55154027 Msa0212870:intron 30.0%
AGTTAATCACGTTTATGTGT+AGG - chr2_1:55154451-55154470 None:intergenic 30.0%
!!! TTTCGAGTTTTACATATTGC+TGG + chr2_1:55154499-55154518 Msa0212870:intron 30.0%
! CTTTTGACATGAAAGTAAGA+TGG - chr2_1:55154543-55154562 None:intergenic 30.0%
!! AATACAAGTGGATTAACCAT+TGG - chr2_1:55154951-55154970 None:intergenic 30.0%
!!! CAAGGGCAAAATAGTTTTTT+AGG + chr2_1:55155097-55155116 Msa0212870:intron 30.0%
TGTTGAGATGTCTTCTAATT+TGG - chr2_1:55155290-55155309 None:intergenic 30.0%
ATGGAAGAGGATATGTATAT+TGG + chr2_1:55155314-55155333 Msa0212870:intron 30.0%
TGGAAGAGGATATGTATATT+GGG + chr2_1:55155315-55155334 Msa0212870:intron 30.0%
GTCATGAGCATTTAATCAAA+AGG + chr2_1:55155461-55155480 Msa0212870:intron 30.0%
CAAAAGGATTAAGTAAACTC+AGG + chr2_1:55155477-55155496 Msa0212870:intron 30.0%
!! TTTTGGCTAAAGCTTCAATT+TGG + chr2_1:55155588-55155607 Msa0212870:intron 30.0%
AAGTCAACTATGTATGTGTT+TGG - chr2_1:55155686-55155705 None:intergenic 30.0%
AAGACTTTAGTGTTCTATCA+AGG + chr2_1:55156207-55156226 Msa0212870:CDS 30.0%
TTTAGTGTTCTATCAAGGAA+GGG + chr2_1:55156212-55156231 Msa0212870:CDS 30.0%
TAAAGGGAGAAAAACTGAAT+GGG + chr2_1:55156239-55156258 Msa0212870:CDS 30.0%
! GCTTGATCTAACCTTTTTAA+AGG + chr2_1:55156393-55156412 Msa0212870:intron 30.0%
AAAGGAGAAAGAAATAAGTC+AGG + chr2_1:55156411-55156430 Msa0212870:intron 30.0%
! ATGTGAGACAAATTTGGTTT+CGG - chr2_1:55156691-55156710 None:intergenic 30.0%
! GTTTTGTAGATAGGAGAATT+TGG - chr2_1:55156816-55156835 None:intergenic 30.0%
GAACTTAGAGTTAAATTGGT+TGG - chr2_1:55157085-55157104 None:intergenic 30.0%
GTTAATTGTTAACTATTCGG+AGG - chr2_1:55157141-55157160 None:intergenic 30.0%
CAAAACAAGTGTCATAGTTT+AGG - chr2_1:55157226-55157245 None:intergenic 30.0%
GCATAATCTTGTGTATATAC+AGG + chr2_1:55157270-55157289 Msa0212870:intron 30.0%
TTGTGTATATACAGGAAGAT+TGG + chr2_1:55157278-55157297 Msa0212870:intron 30.0%
TGTGTATATACAGGAAGATT+GGG + chr2_1:55157279-55157298 Msa0212870:intron 30.0%
ATGTAAGAATCCATTAATGC+TGG - chr2_1:55157397-55157416 None:intergenic 30.0%
GTTGTTATATGGTTGTAGAT+TGG - chr2_1:55157502-55157521 None:intergenic 30.0%
CAACCATATAACAACCAATA+TGG + chr2_1:55157507-55157526 Msa0212870:CDS 30.0%
! GTTCCATATTGGTTGTTATA+TGG - chr2_1:55157513-55157532 None:intergenic 30.0%
!!! AGGTAATTTTGGTTCCATAT+TGG - chr2_1:55157524-55157543 None:intergenic 30.0%
! ACTTGCATTGTTGTTATTGT+TGG - chr2_1:55157551-55157570 None:intergenic 30.0%
AACAACAATGCAAGTACATT+TGG + chr2_1:55157556-55157575 Msa0212870:CDS 30.0%
TTTGAGTCAACTATCAAAGA+TGG + chr2_1:55157636-55157655 Msa0212870:CDS 30.0%
TTAGAAATTGTTCCACATGT+GGG - chr2_1:55157755-55157774 None:intergenic 30.0%
ATTAGAAATTGTTCCACATG+TGG - chr2_1:55157756-55157775 None:intergenic 30.0%
! ATTCAGATTCCTTTTCAATC+CGG - chr2_1:55157889-55157908 None:intergenic 30.0%
AATCATCTACCGTTGTAATA+TGG + chr2_1:55157906-55157925 Msa0212870:three_prime_UTR 30.0%
! AGACAAAAATAGGAGTACAA+GGG + chr2_1:55157973-55157992 Msa0212870:three_prime_UTR 30.0%
!!! TTGTAGTTCATTTTAGTTGG+TGG + chr2_1:55158144-55158163 Msa0212870:three_prime_UTR 30.0%
GTGTGATTACTTGATGAAGA+AGG + chr2_1:55152946-55152965 Msa0212870:CDS 35.0%
GTCAACATCAATCATGAGAA+AGG - chr2_1:55152987-55153006 None:intergenic 35.0%
! TCAGAGCATTAATACTAACC+AGG - chr2_1:55153037-55153056 None:intergenic 35.0%
ATAGCTGTAACCATTGTTCA+AGG - chr2_1:55153620-55153639 None:intergenic 35.0%
TTGAACAATGGTTACAGCTA+TGG + chr2_1:55153619-55153638 Msa0212870:intron 35.0%
CCCACATAAAAAATGCAGAT+TGG - chr2_1:55153925-55153944 None:intergenic 35.0%
TAATAGAGATAGGTAGGTAC+AGG + chr2_1:55154018-55154037 Msa0212870:intron 35.0%
AGATGGACATACTCTTAGTT+TGG - chr2_1:55154526-55154545 None:intergenic 35.0%
AGAGAGACTTATCATTAGGA+GGG + chr2_1:55154581-55154600 Msa0212870:intron 35.0%
! GTTTTATATGCATGATCGTG+AGG + chr2_1:55154626-55154645 Msa0212870:intron 35.0%
!! GAAATCGCCATAACTAGTTT+TGG + chr2_1:55155213-55155232 Msa0212870:intron 35.0%
GAAGACATCTCAACAATTGA+TGG + chr2_1:55155295-55155314 Msa0212870:intron 35.0%
ATCTCAACAATTGATGGAAG+AGG + chr2_1:55155301-55155320 Msa0212870:intron 35.0%
ACTGGTAGAAGCAAGAAAAA+CGG + chr2_1:55155563-55155582 Msa0212870:intron 35.0%
! AAGCAAGAAAAACGGAGTTT+TGG + chr2_1:55155571-55155590 Msa0212870:intron 35.0%
CTTTAGTGTTCTATCAAGGA+AGG + chr2_1:55156211-55156230 Msa0212870:CDS 35.0%
! CATTCAGTTTTTCTCCCTTT+AGG - chr2_1:55156240-55156259 None:intergenic 35.0%
CTAAAGGGAGAAAAACTGAA+TGG + chr2_1:55156238-55156257 Msa0212870:CDS 35.0%
TATGCATGAGTTTCGTATTG+AGG + chr2_1:55156263-55156282 Msa0212870:CDS 35.0%
ATGCATGAGTTTCGTATTGA+GGG + chr2_1:55156264-55156283 Msa0212870:CDS 35.0%
! AAAAATGACTATAGGGCACT+TGG + chr2_1:55156483-55156502 Msa0212870:intron 35.0%
!! ATAGCCTTGTATTACTTTCC+TGG + chr2_1:55156586-55156605 Msa0212870:intron 35.0%
CATACCAGGAAAGTAATACA+AGG - chr2_1:55156593-55156612 None:intergenic 35.0%
TTACTTTCCTGGTATGAATG+AGG + chr2_1:55156597-55156616 Msa0212870:intron 35.0%
TACTTTCCTGGTATGAATGA+GGG + chr2_1:55156598-55156617 Msa0212870:intron 35.0%
GAAACCAAATTTGTCTCACA+TGG + chr2_1:55156690-55156709 Msa0212870:intron 35.0%
ATAGCCATGTGAGACAAATT+TGG - chr2_1:55156697-55156716 None:intergenic 35.0%
AATTTGTCTCACATGGCTAT+TGG + chr2_1:55156697-55156716 Msa0212870:intron 35.0%
AATTCAGAGAGGATCTACTT+AGG - chr2_1:55156759-55156778 None:intergenic 35.0%
! TTGACTCGATGACCTTAATA+TGG + chr2_1:55156969-55156988 Msa0212870:intron 35.0%
TGACTCGATGACCTTAATAT+GGG + chr2_1:55156970-55156989 Msa0212870:intron 35.0%
TAACTCTAAGTTCAAACCAG+TGG + chr2_1:55157092-55157111 Msa0212870:intron 35.0%
TTCATCACTTCCAGCATTAA+TGG + chr2_1:55157384-55157403 Msa0212870:CDS 35.0%
CTTGCTCATATTCATCTGTA+TGG - chr2_1:55157441-55157460 None:intergenic 35.0%
!!! GGTTTGGTTTTGAGAAAACA+TGG - chr2_1:55157476-55157495 None:intergenic 35.0%
TATATGGTTGTAGATTGGGT+TGG - chr2_1:55157497-55157516 None:intergenic 35.0%
!! TTGTTGGCTAGAGGTAATTT+TGG - chr2_1:55157535-55157554 None:intergenic 35.0%
! TTGTTGTTATTGTTGGCTAG+AGG - chr2_1:55157544-55157563 None:intergenic 35.0%
AACAATGCAAGTACATTTGG+AGG + chr2_1:55157559-55157578 Msa0212870:CDS 35.0%
GATAAAGGGTCTAAGCTATA+AGG - chr2_1:55157589-55157608 None:intergenic 35.0%
TGAGAGTTACTTATCTGAAG+TGG + chr2_1:55157723-55157742 Msa0212870:CDS 35.0%
! GAGAGTTACTTATCTGAAGT+GGG + chr2_1:55157724-55157743 Msa0212870:CDS 35.0%
TAGAAATTGTTCCACATGTG+GGG - chr2_1:55157754-55157773 None:intergenic 35.0%
! GATCATCTGCATCTAAAATG+TGG + chr2_1:55157838-55157857 Msa0212870:three_prime_UTR 35.0%
AGGATCCAATTTCGATGAAA+AGG + chr2_1:55157943-55157962 Msa0212870:three_prime_UTR 35.0%
! CAGACAAAAATAGGAGTACA+AGG + chr2_1:55157972-55157991 Msa0212870:three_prime_UTR 35.0%
TCCCGGTATATTAGAAAGAT+GGG + chr2_1:55158097-55158116 Msa0212870:three_prime_UTR 35.0%
!!! AGTTCATTTTAGTTGGTGGA+TGG + chr2_1:55158148-55158167 Msa0212870:three_prime_UTR 35.0%
GAGTAACATAAGCATGGTTG+AGG + chr2_1:55152874-55152893 Msa0212870:CDS 40.0%
TACTAACCAGGAATATCCCA+TGG - chr2_1:55153025-55153044 None:intergenic 40.0%
TTGTACATGCAGGGGATTAT+AGG - chr2_1:55153412-55153431 None:intergenic 40.0%
ACTGCACAATTGTACATGCA+GGG - chr2_1:55153421-55153440 None:intergenic 40.0%
ATATACACATACACGCACCA+TGG + chr2_1:55154210-55154229 Msa0212870:intron 40.0%
GCTGAGAGAGACTTATCATT+AGG + chr2_1:55154577-55154596 Msa0212870:intron 40.0%
GAGAGAGACTTATCATTAGG+AGG + chr2_1:55154580-55154599 Msa0212870:intron 40.0%
GAAAAAGAAACTGTTAGGGG+TGG + chr2_1:55155264-55155283 Msa0212870:intron 40.0%
AACTAGTCATAGTGCCTGTT+TGG + chr2_1:55155537-55155556 Msa0212870:intron 40.0%
ATAGTGCCTGTTTGGTATAC+TGG + chr2_1:55155545-55155564 Msa0212870:intron 40.0%
CTTCTACCAGTATACCAAAC+AGG - chr2_1:55155554-55155573 None:intergenic 40.0%
!!! TTGGAGCTTCTGCTTTTTCA+CGG + chr2_1:55155607-55155626 Msa0212870:intron 40.0%
! TTTTCACGGCAGAATTGCTT+TGG + chr2_1:55155621-55155640 Msa0212870:intron 40.0%
! CTTTTTCCCAACCAAAACCA+CGG - chr2_1:55155658-55155677 None:intergenic 40.0%
AGAGACCGTAAATATGCAAC+AGG + chr2_1:55156090-55156109 Msa0212870:CDS 40.0%
GAGACCGTAAATATGCAACA+GGG + chr2_1:55156091-55156110 Msa0212870:CDS 40.0%
GTAGCCCTGTTGCATATTTA+CGG - chr2_1:55156098-55156117 None:intergenic 40.0%
AACTGCATCAGGTTATTGGA+AGG + chr2_1:55156131-55156150 Msa0212870:CDS 40.0%
TTATTGGAAGGCAACAGGAA+AGG + chr2_1:55156143-55156162 Msa0212870:CDS 40.0%
GACTCGATGACCTTAATATG+GGG + chr2_1:55156971-55156990 Msa0212870:intron 40.0%
ATTCGGAGGGATCTAAAGAA+GGG - chr2_1:55157127-55157146 None:intergenic 40.0%
TATTCGGAGGGATCTAAAGA+AGG - chr2_1:55157128-55157147 None:intergenic 40.0%
!! AGGAAGATTGGGTTTTGTGT+AGG + chr2_1:55157290-55157309 Msa0212870:intron 40.0%
!! GGAAGATTGGGTTTTGTGTA+GGG + chr2_1:55157291-55157310 Msa0212870:intron 40.0%
CATCTGTATGGAATTGAGCT+TGG - chr2_1:55157429-55157448 None:intergenic 40.0%
TGAGAAAACATGGAGAAGCA+GGG - chr2_1:55157466-55157485 None:intergenic 40.0%
TTGAGAAAACATGGAGAAGC+AGG - chr2_1:55157467-55157486 None:intergenic 40.0%
GCTTCAGCACCATATTACAA+CGG - chr2_1:55157918-55157937 None:intergenic 40.0%
! GTTCGCCTTTTCATCGAAAT+TGG - chr2_1:55157951-55157970 None:intergenic 40.0%
AGGCGAACACAGACAAAAAT+AGG + chr2_1:55157963-55157982 Msa0212870:three_prime_UTR 40.0%
TCTATCCACATGATATGTCC+CGG + chr2_1:55158080-55158099 Msa0212870:three_prime_UTR 40.0%
ATATACCGGGACATATCATG+TGG - chr2_1:55158088-55158107 None:intergenic 40.0%
GTCCCGGTATATTAGAAAGA+TGG + chr2_1:55158096-55158115 Msa0212870:three_prime_UTR 40.0%
CCCCATCTTTCTAATATACC+GGG - chr2_1:55158101-55158120 None:intergenic 40.0%
CCCGGTATATTAGAAAGATG+GGG + chr2_1:55158098-55158117 Msa0212870:three_prime_UTR 40.0%
GCCCCATCTTTCTAATATAC+CGG - chr2_1:55158102-55158121 None:intergenic 40.0%
! GAAAGATGGGGCTTTGTAAT+TGG + chr2_1:55158110-55158129 Msa0212870:three_prime_UTR 40.0%
CTAGGATGAAATCTGAACCC+TGG - chr2_1:55152911-55152930 None:intergenic 45.0%
CACACAAGCTCTTCATCTCT+AGG - chr2_1:55152929-55152948 None:intergenic 45.0%
ACCTTAACAAGTGTGAGCCA+TGG + chr2_1:55153005-55153024 Msa0212870:CDS 45.0%
CCTTAACAAGTGTGAGCCAT+GGG + chr2_1:55153006-55153025 Msa0212870:CDS 45.0%
CTGCACAATTGTACATGCAG+GGG - chr2_1:55153420-55153439 None:intergenic 45.0%
CACTGCACAATTGTACATGC+AGG - chr2_1:55153422-55153441 None:intergenic 45.0%
TAGAGATAGGTAGGTACAGG+TGG + chr2_1:55154021-55154040 Msa0212870:intron 45.0%
ACATACACGCACCATGGAAA+GGG + chr2_1:55154216-55154235 Msa0212870:intron 45.0%
ACTGTCTACATCCCTTTCCA+TGG - chr2_1:55154230-55154249 None:intergenic 45.0%
GAAAGGGATGTAGACAGTTG+AGG + chr2_1:55154232-55154251 Msa0212870:intron 45.0%
ACAAATCGTGCAACTGCATC+AGG + chr2_1:55156120-55156139 Msa0212870:CDS 45.0%
GTGCAACTGCATCAGGTTAT+TGG + chr2_1:55156127-55156146 Msa0212870:CDS 45.0%
TCAGGTTATTGGAAGGCAAC+AGG + chr2_1:55156138-55156157 Msa0212870:CDS 45.0%
GACAGAGCTATCCTTCGTAA+GGG + chr2_1:55156165-55156184 Msa0212870:CDS 45.0%
!! TATCAAGGAAGGGCACCTAA+AGG + chr2_1:55156222-55156241 Msa0212870:CDS 45.0%
!! ATCAAGGAAGGGCACCTAAA+GGG + chr2_1:55156223-55156242 Msa0212870:CDS 45.0%
TTTCGTATTGAGGGTCCTCA+TGG + chr2_1:55156273-55156292 Msa0212870:CDS 45.0%
!! GAAATTTTAGGAGGGCCATG+AGG - chr2_1:55156291-55156310 None:intergenic 45.0%
TTTCCTGGTATGAATGAGGG+AGG + chr2_1:55156601-55156620 Msa0212870:intron 45.0%
TTACCTCCCTCATTCATACC+AGG - chr2_1:55156607-55156626 None:intergenic 45.0%
GATGACCTTAATATGGGGTG+TGG + chr2_1:55156976-55156995 Msa0212870:intron 45.0%
ACCTTAATATGGGGTGTGGT+GGG + chr2_1:55156980-55156999 Msa0212870:intron 45.0%
AGAAGGGACAAATGTTCCAC+TGG - chr2_1:55157111-55157130 None:intergenic 45.0%
TGCTACAAAACCTCCAAGCA+TGG + chr2_1:55157336-55157355 Msa0212870:CDS 45.0%
GCTACAAAACCTCCAAGCAT+GGG + chr2_1:55157337-55157356 Msa0212870:CDS 45.0%
TCATAGCAACTACCCATGCT+TGG - chr2_1:55157352-55157371 None:intergenic 45.0%
GGTAGTTGCTATGATGACAC+AGG + chr2_1:55157358-55157377 Msa0212870:CDS 45.0%
!! GGTTGTAGATTGGGTTGGTT+TGG - chr2_1:55157492-55157511 None:intergenic 45.0%
!!! AGCTTGGTGATGACCCTTTT+AGG - chr2_1:55157687-55157706 None:intergenic 45.0%
AAAGGGTCATCACCAAGCTT+AGG + chr2_1:55157688-55157707 Msa0212870:CDS 45.0%
TCATCACCAAGCTTAGGTGA+AGG + chr2_1:55157694-55157713 Msa0212870:CDS 45.0%
GAACTTCCTTCACCTAAGCT+TGG - chr2_1:55157703-55157722 None:intergenic 45.0%
GATTCAGGTCCGGATTGAAA+AGG + chr2_1:55157877-55157896 Msa0212870:three_prime_UTR 45.0%
! ATATGGTGCTGAAGCTGTAG+AGG + chr2_1:55157923-55157942 Msa0212870:three_prime_UTR 45.0%
!! AAATAATATTATTTATACTT+AGG + chr2_1:55154084-55154103 Msa0212870:intron 5.0%
!!! AAAATATTTTTGATTAATTA+AGG - chr2_1:55154329-55154348 None:intergenic 5.0%
!!! TAATCAAAAATATTTTTATT+TGG + chr2_1:55154333-55154352 Msa0212870:intron 5.0%
!!! TTCTTTTTTATAAATATTTT+TGG + chr2_1:55156458-55156477 Msa0212870:intron 5.0%
TTGAGGCAAAGCTACCACCA+GGG + chr2_1:55152891-55152910 Msa0212870:CDS 50.0%
GGATGAAATCTGAACCCTGG+TGG - chr2_1:55152908-55152927 None:intergenic 50.0%
! CCCATGGCTCACACTTGTTA+AGG - chr2_1:55153009-55153028 None:intergenic 50.0%
TGTGAGCCATGGGATATTCC+TGG + chr2_1:55153016-55153035 Msa0212870:CDS 50.0%
CACATACACGCACCATGGAA+AGG + chr2_1:55154215-55154234 Msa0212870:intron 50.0%
! TATCTGTGCTGCCGTGGTTT+TGG + chr2_1:55155644-55155663 Msa0212870:intron 50.0%
GGACAGAGCTATCCTTCGTA+AGG + chr2_1:55156164-55156183 Msa0212870:CDS 50.0%
!! CAACAAGAGTGCCCTTACGA+AGG - chr2_1:55156179-55156198 None:intergenic 50.0%
!! CTTCGTAAGGGCACTCTTGT+TGG + chr2_1:55156177-55156196 Msa0212870:CDS 50.0%
GACCTTAATATGGGGTGTGG+TGG + chr2_1:55156979-55156998 Msa0212870:intron 50.0%
TCCCACCACACCCCATATTA+AGG - chr2_1:55156984-55157003 None:intergenic 50.0%
TAGCAACTACCCATGCTTGG+AGG - chr2_1:55157349-55157368 None:intergenic 50.0%
GACGTTAGAGGATTCAGGTC+CGG + chr2_1:55157867-55157886 Msa0212870:three_prime_UTR 50.0%
GTTGAGGCAAAGCTACCACC+AGG + chr2_1:55152890-55152909 Msa0212870:CDS 55.0%
CTTTGGTATCTGTGCTGCCG+TGG + chr2_1:55155638-55155657 Msa0212870:intron 55.0%
!!! TGTGCTGCCGTGGTTTTGGT+TGG + chr2_1:55155648-55155667 Msa0212870:intron 55.0%
!!! GTGCTGCCGTGGTTTTGGTT+GGG + chr2_1:55155649-55155668 Msa0212870:intron 55.0%
TGGTGCAGAAGCAGCATGTG+TGG + chr2_1:55156038-55156057 Msa0212870:intron 55.0%
GGTGCAGAAGCAGCATGTGT+GGG + chr2_1:55156039-55156058 Msa0212870:intron 55.0%
CAGAAGCAGCATGTGTGGGA+GGG + chr2_1:55156043-55156062 Msa0212870:intron 55.0%
CATGTGTGGGAGGGAAAGAG+TGG + chr2_1:55156052-55156071 Msa0212870:CDS 55.0%
!! ATGTGGTGCTGCGACGTTAG+AGG + chr2_1:55157855-55157874 Msa0212870:three_prime_UTR 55.0%
GCTGCGACGTTAGAGGATTC+AGG + chr2_1:55157862-55157881 Msa0212870:three_prime_UTR 55.0%
GCAGAAGCAGCATGTGTGGG+AGG + chr2_1:55156042-55156061 Msa0212870:intron 60.0%
AAGTGGGCATGCCCCACATG+TGG + chr2_1:55157740-55157759 Msa0212870:CDS 60.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 55152778 55158281 55152778 ID=Msa0212870;Name=Msa0212870
chr2_1 mRNA 55152778 55158281 55152778 ID=Msa0212870-mRNA-1;Parent=Msa0212870;Name=Msa0212870-mRNA-1;_AED=0.03;_eAED=0.03;_QI=94|1|1|1|1|1|3|507|307
chr2_1 exon 55152778 55153037 55152778 ID=Msa0212870-mRNA-1:exon:15304;Parent=Msa0212870-mRNA-1
chr2_1 exon 55156046 55156320 55156046 ID=Msa0212870-mRNA-1:exon:15305;Parent=Msa0212870-mRNA-1
chr2_1 exon 55157292 55158281 55157292 ID=Msa0212870-mRNA-1:exon:15306;Parent=Msa0212870-mRNA-1
chr2_1 five_prime_UTR 55152778 55152871 55152778 ID=Msa0212870-mRNA-1:five_prime_utr;Parent=Msa0212870-mRNA-1
chr2_1 CDS 55152872 55153037 55152872 ID=Msa0212870-mRNA-1:cds;Parent=Msa0212870-mRNA-1
chr2_1 CDS 55156046 55156320 55156046 ID=Msa0212870-mRNA-1:cds;Parent=Msa0212870-mRNA-1
chr2_1 CDS 55157292 55157774 55157292 ID=Msa0212870-mRNA-1:cds;Parent=Msa0212870-mRNA-1
chr2_1 three_prime_UTR 55157775 55158281 55157775 ID=Msa0212870-mRNA-1:three_prime_utr;Parent=Msa0212870-mRNA-1
Gene Sequence

>Msa0212870

ATGAGTAACATAAGCATGGTTGAGGCAAAGCTACCACCAGGGTTCAGATTTCATCCTAGAGATGAAGAGCTTGTGTGTGATTACTTGATGAAGAAGGTGACACATAGTGATTCCTTTCTCATGATTGATGTTGACCTTAACAAGTGTGAGCCATGGGATATTCCTGAAGCAGCATGTGTGGGAGGGAAAGAGTGGTATTTCTATACACAAAGAGACCGTAAATATGCAACAGGGCTACGCACAAATCGTGCAACTGCATCAGGTTATTGGAAGGCAACAGGAAAGGACAGAGCTATCCTTCGTAAGGGCACTCTTGTTGGAATGAGAAAGACTTTAGTGTTCTATCAAGGAAGGGCACCTAAAGGGAGAAAAACTGAATGGGTTATGCATGAGTTTCGTATTGAGGGTCCTCATGGCCCTCCTAAAATTTCATCTTCTAAGGAAGATTGGGTTTTGTGTAGGGTGTTCTACAAAAACAGAGAAGTTGCTACAAAACCTCCAAGCATGGGTAGTTGCTATGATGACACAGGCTCTTCATCACTTCCAGCATTAATGGATTCTTACATAAGTTTTGACCAAGCTCAATTCCATACAGATGAATATGAGCAAGTGCCCTGCTTCTCCATGTTTTCTCAAAACCAAACCAACCCAATCTACAACCATATAACAACCAATATGGAACCAAAATTACCTCTAGCCAACAATAACAACAATGCAAGTACATTTGGAGGAGCACCTTATAGCTTAGACCCTTTATCATGTGATAGAAAAGTGTTGAAAGCTGTTTTGAGTCAACTATCAAAGATGGAAAGAAACCCTATTAATGATCAAAACCTAAAAGGGTCATCACCAAGCTTAGGTGAAGGAAGTTCTGAGAGTTACTTATCTGAAGTGGGCATGCCCCACATGTGGAACAATTTCTAA
Protein sequence

>Msa0212870

MSNISMVEAKLPPGFRFHPRDEELVCDYLMKKVTHSDSFLMIDVDLNKCEPWDIPEAACVGGKEWYFYTQRDRKYATGLRTNRATASGYWKATGKDRAILRKGTLVGMRKTLVFYQGRAPKGRKTEWVMHEFRIEGPHGPPKISSSKEDWVLCRVFYKNREVATKPPSMGSCYDDTGSSSLPALMDSYISFDQAQFHTDEYEQVPCFSMFSQNQTNPIYNHITTNMEPKLPLANNNNNASTFGGAPYSLDPLSCDRKVLKAVLSQLSKMERNPINDQNLKGSSPSLGEGSSESYLSEVGMPHMWNNF*