Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1199870 | sp|P52581|IFRH_LUPAL | 77.885 | 312 | 69 | 0 | 1 | 312 | 1 | 312 | 0.0 | 508 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1199870 | A0A072TT01 | 99.359 | 312 | 2 | 0 | 1 | 312 | 1 | 312 | 0.0 | 633 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004480 | Msa1199870 | 0.836672 | 8.157845e-57 | -8.615850e-47 |
| Msa0011920 | Msa1199870 | -0.801192 | 1.011008e-48 | -8.615850e-47 |
| Msa0026420 | Msa1199870 | 0.801679 | 8.034289e-49 | -8.615850e-47 |
| Msa0037280 | Msa1199870 | 0.809510 | 1.826166e-50 | -8.615850e-47 |
| Msa0037720 | Msa1199870 | 0.832085 | 1.155702e-55 | -8.615850e-47 |
| Msa0052780 | Msa1199870 | 0.836306 | 1.011229e-56 | -8.615850e-47 |
| Msa0054770 | Msa1199870 | 0.817714 | 2.857969e-52 | -8.615850e-47 |
| Msa0083240 | Msa1199870 | 0.845865 | 3.111043e-59 | -8.615850e-47 |
| Msa0087550 | Msa1199870 | 0.827648 | 1.393100e-54 | -8.615850e-47 |
| Msa0090380 | Msa1199870 | 0.812919 | 3.326937e-51 | -8.615850e-47 |
| Msa0097570 | Msa1199870 | 0.834158 | 3.523687e-56 | -8.615850e-47 |
| Msa0100750 | Msa1199870 | 0.829610 | 4.674969e-55 | -8.615850e-47 |
| Msa0104810 | Msa1199870 | 0.804820 | 1.797949e-49 | -8.615850e-47 |
| Msa0611060 | Msa1199870 | 0.847261 | 1.293354e-59 | -8.615850e-47 |
| Msa0614290 | Msa1199870 | 0.826878 | 2.130124e-54 | -8.615850e-47 |
| Msa0614480 | Msa1199870 | 0.833164 | 6.241911e-56 | -8.615850e-47 |
| Msa0615200 | Msa1199870 | 0.808723 | 2.692059e-50 | -8.615850e-47 |
| Msa0615210 | Msa1199870 | 0.800613 | 1.327271e-48 | -8.615850e-47 |
| Msa0618550 | Msa1199870 | 0.816191 | 6.280018e-52 | -8.615850e-47 |
| Msa0638810 | Msa1199870 | 0.813419 | 2.584490e-51 | -8.615850e-47 |
| Msa0638820 | Msa1199870 | 0.823693 | 1.207404e-53 | -8.615850e-47 |
| Msa0639110 | Msa1199870 | 0.842210 | 2.970910e-58 | -8.615850e-47 |
| Msa0642920 | Msa1199870 | 0.803859 | 2.851107e-49 | -8.615850e-47 |
| Msa0657340 | Msa1199870 | 0.837436 | 5.203166e-57 | -8.615850e-47 |
| Msa0669740 | Msa1199870 | 0.821067 | 4.915550e-53 | -8.615850e-47 |
| Msa0672980 | Msa1199870 | 0.804487 | 2.109474e-49 | -8.615850e-47 |
| Msa0693750 | Msa1199870 | 0.828219 | 1.015159e-54 | -8.615850e-47 |
| Msa0697510 | Msa1199870 | 0.827634 | 1.404170e-54 | -8.615850e-47 |
| Msa0697520 | Msa1199870 | 0.827389 | 1.607157e-54 | -8.615850e-47 |
| Msa0701430 | Msa1199870 | 0.825712 | 4.035693e-54 | -8.615850e-47 |
| Msa0713060 | Msa1199870 | 0.975717 | 1.817760e-140 | -8.615850e-47 |
| Msa0737430 | Msa1199870 | 0.863839 | 1.869218e-64 | -8.615850e-47 |
| Msa0744540 | Msa1199870 | 0.856178 | 3.834065e-62 | -8.615850e-47 |
| Msa0744550 | Msa1199870 | 0.842210 | 2.971387e-58 | -8.615850e-47 |
| Msa0744560 | Msa1199870 | 0.855219 | 7.304124e-62 | -8.615850e-47 |
| Msa0744640 | Msa1199870 | 0.817247 | 3.640459e-52 | -8.615850e-47 |
| Msa0772490 | Msa1199870 | 0.848336 | 6.539221e-60 | -8.615850e-47 |
| Msa0779230 | Msa1199870 | 0.809698 | 1.663828e-50 | -8.615850e-47 |
| Msa0798450 | Msa1199870 | 0.803020 | 4.255107e-49 | -8.615850e-47 |
| Msa0810440 | Msa1199870 | 0.803407 | 3.537636e-49 | -8.615850e-47 |
| Msa0816630 | Msa1199870 | 0.880601 | 4.797893e-70 | -8.615850e-47 |
| Msa0826370 | Msa1199870 | 0.835032 | 2.124881e-56 | -8.615850e-47 |
| Msa0826380 | Msa1199870 | 0.895745 | 7.156248e-76 | -8.615850e-47 |
| Msa0826450 | Msa1199870 | 0.877397 | 6.493009e-69 | -8.615850e-47 |
| Msa0832620 | Msa1199870 | 0.810182 | 1.308785e-50 | -8.615850e-47 |
| Msa0837000 | Msa1199870 | 0.813118 | 3.008985e-51 | -8.615850e-47 |
| Msa0841730 | Msa1199870 | 0.816468 | 5.444406e-52 | -8.615850e-47 |
| Msa0129640 | Msa1199870 | 0.904633 | 1.000849e-79 | -8.615850e-47 |
| Msa0132430 | Msa1199870 | 0.801911 | 7.200747e-49 | -8.615850e-47 |
| Msa0134270 | Msa1199870 | 0.804942 | 1.695781e-49 | -8.615850e-47 |
| Msa0137860 | Msa1199870 | 0.803302 | 3.719035e-49 | -8.615850e-47 |
| Msa0145430 | Msa1199870 | 0.846454 | 2.150336e-59 | -8.615850e-47 |
| Msa0147790 | Msa1199870 | 0.851597 | 8.000812e-61 | -8.615850e-47 |
| Msa0178000 | Msa1199870 | 0.810010 | 1.425764e-50 | -8.615850e-47 |
| Msa0182020 | Msa1199870 | 0.839525 | 1.504599e-57 | -8.615850e-47 |
| Msa0196880 | Msa1199870 | 0.805142 | 1.539814e-49 | -8.615850e-47 |
| Msa0212870 | Msa1199870 | 0.803281 | 3.757565e-49 | -8.615850e-47 |
| Msa0223140 | Msa1199870 | 0.831165 | 1.948369e-55 | -8.615850e-47 |
| Msa0238710 | Msa1199870 | 0.805688 | 1.182732e-49 | -8.615850e-47 |
| Msa0366780 | Msa1199870 | 0.820611 | 6.260864e-53 | -8.615850e-47 |
| Msa0366810 | Msa1199870 | 0.808184 | 3.507864e-50 | -8.615850e-47 |
| Msa0374290 | Msa1199870 | 0.823102 | 1.659514e-53 | -8.615850e-47 |
| Msa0393100 | Msa1199870 | 0.836026 | 1.190770e-56 | -8.615850e-47 |
| Msa0397790 | Msa1199870 | 0.818588 | 1.812292e-52 | -8.615850e-47 |
| Msa0402800 | Msa1199870 | 0.862354 | 5.378064e-64 | -8.615850e-47 |
| Msa0405200 | Msa1199870 | 0.804997 | 1.651083e-49 | -8.615850e-47 |
| Msa0414730 | Msa1199870 | 0.814529 | 1.470967e-51 | -8.615850e-47 |
| Msa0434400 | Msa1199870 | 0.816107 | 6.556380e-52 | -8.615850e-47 |
| Msa0440730 | Msa1199870 | 0.808489 | 3.021105e-50 | -8.615850e-47 |
| Msa0443450 | Msa1199870 | 0.813240 | 2.829712e-51 | -8.615850e-47 |
| Msa0449620 | Msa1199870 | 0.846319 | 2.340277e-59 | -8.615850e-47 |
| Msa0458220 | Msa1199870 | 0.822321 | 2.522130e-53 | -8.615850e-47 |
| Msa0480530 | Msa1199870 | 0.858520 | 7.786892e-63 | -8.615850e-47 |
| Msa0480540 | Msa1199870 | 0.840034 | 1.108433e-57 | -8.615850e-47 |
| Msa0480550 | Msa1199870 | 0.852452 | 4.573070e-61 | -8.615850e-47 |
| Msa1016960 | Msa1199870 | 0.834018 | 3.819751e-56 | -8.615850e-47 |
| Msa1028660 | Msa1199870 | 0.822277 | 2.581653e-53 | -8.615850e-47 |
| Msa1041250 | Msa1199870 | 0.804438 | 2.160158e-49 | -8.615850e-47 |
| Msa1058200 | Msa1199870 | 0.837286 | 5.684064e-57 | -8.615850e-47 |
| Msa1062080 | Msa1199870 | 0.815498 | 8.963947e-52 | -8.615850e-47 |
| Msa1068380 | Msa1199870 | 0.827194 | 1.789922e-54 | -8.615850e-47 |
| Msa0242790 | Msa1199870 | 0.817287 | 3.566219e-52 | -8.615850e-47 |
| Msa0246140 | Msa1199870 | 0.850183 | 2.001507e-60 | -8.615850e-47 |
| Msa0254640 | Msa1199870 | 0.844202 | 8.747318e-59 | -8.615850e-47 |
| Msa0264680 | Msa1199870 | 0.834436 | 3.001351e-56 | -8.615850e-47 |
| Msa0265480 | Msa1199870 | 0.810704 | 1.010008e-50 | -8.615850e-47 |
| Msa0266220 | Msa1199870 | 0.821894 | 3.167936e-53 | -8.615850e-47 |
| Msa0276430 | Msa1199870 | 0.819273 | 1.266377e-52 | -8.615850e-47 |
| Msa0281050 | Msa1199870 | 0.827660 | 1.383731e-54 | -8.615850e-47 |
| Msa0284730 | Msa1199870 | 0.837363 | 5.432623e-57 | -8.615850e-47 |
| Msa0287680 | Msa1199870 | 0.828068 | 1.104118e-54 | -8.615850e-47 |
| Msa0302730 | Msa1199870 | 0.819963 | 8.810253e-53 | -8.615850e-47 |
| Msa0306310 | Msa1199870 | 0.841783 | 3.852929e-58 | -8.615850e-47 |
| Msa0316470 | Msa1199870 | 0.833044 | 6.684892e-56 | -8.615850e-47 |
| Msa0319680 | Msa1199870 | 0.835520 | 1.599956e-56 | -8.615850e-47 |
| Msa0332360 | Msa1199870 | 0.827626 | 1.409990e-54 | -8.615850e-47 |
| Msa0339720 | Msa1199870 | 0.825015 | 5.901479e-54 | -8.615850e-47 |
| Msa0340370 | Msa1199870 | 0.812041 | 5.176288e-51 | -8.615850e-47 |
| Msa0345050 | Msa1199870 | 0.800224 | 1.593525e-48 | -8.615850e-47 |
| Msa0345890 | Msa1199870 | 0.800461 | 1.425856e-48 | -8.615850e-47 |
| Msa0345980 | Msa1199870 | 0.811522 | 6.713503e-51 | -8.615850e-47 |
| Msa0351050 | Msa1199870 | 0.828557 | 8.413733e-55 | -8.615850e-47 |
| Msa0356580 | Msa1199870 | 0.808890 | 2.479780e-50 | -8.615850e-47 |
| Msa1107230 | Msa1199870 | 0.822106 | 2.828092e-53 | -8.615850e-47 |
| Msa1113100 | Msa1199870 | 0.821486 | 3.936856e-53 | -8.615850e-47 |
| Msa1121300 | Msa1199870 | 0.820850 | 5.514687e-53 | -8.615850e-47 |
| Msa1126870 | Msa1199870 | 0.800112 | 1.679417e-48 | -8.615850e-47 |
| Msa1154240 | Msa1199870 | 0.801540 | 8.581558e-49 | -8.615850e-47 |
| Msa1156490 | Msa1199870 | 0.820599 | 6.298421e-53 | -8.615850e-47 |
| Msa1157200 | Msa1199870 | 0.818151 | 2.276429e-52 | -8.615850e-47 |
| Msa1173150 | Msa1199870 | 0.835829 | 1.336007e-56 | -8.615850e-47 |
| Msa1174280 | Msa1199870 | 0.813251 | 2.813381e-51 | -8.615850e-47 |
| Msa1196110 | Msa1199870 | 0.815318 | 9.828612e-52 | -8.615850e-47 |
| Msa1199870 | Msa1202110 | 0.825814 | 3.817015e-54 | -8.615850e-47 |
| Msa1199870 | Msa1202470 | 0.850838 | 1.310810e-60 | -8.615850e-47 |
| Msa1199870 | Msa1212470 | 0.825770 | 3.910166e-54 | -8.615850e-47 |
| Msa1199870 | Msa1217260 | 0.835868 | 1.305867e-56 | -8.615850e-47 |
| Msa1199870 | Msa1218160 | 0.832809 | 7.646600e-56 | -8.615850e-47 |
| Msa1199870 | Msa1221220 | 0.842790 | 2.085203e-58 | -8.615850e-47 |
| Msa1199870 | Msa1225580 | 0.827872 | 1.230926e-54 | -8.615850e-47 |
| Msa1199870 | Msa1234540 | 0.817110 | 3.908026e-52 | -8.615850e-47 |
| Msa1199870 | Msa1252810 | 0.976494 | 6.223002e-142 | -8.615850e-47 |
| Msa1199870 | Msa1254870 | 0.823549 | 1.304903e-53 | -8.615850e-47 |
| Msa1199870 | Msa1254910 | 0.821268 | 4.419011e-53 | -8.615850e-47 |
| Msa1199870 | Msa1262540 | 0.812888 | 3.378745e-51 | -8.615850e-47 |
| Msa1199870 | Msa1279100 | 0.814671 | 1.368477e-51 | -8.615850e-47 |
| Msa1199870 | Msa1284090 | 0.827247 | 1.738207e-54 | -8.615850e-47 |
| Msa1199870 | Msa1299780 | 0.815356 | 9.640832e-52 | -8.615850e-47 |
| Msa1199870 | Msa1299910 | 0.818073 | 2.371078e-52 | -8.615850e-47 |
| Msa1199870 | Msa1302340 | 0.806944 | 6.432949e-50 | -8.615850e-47 |
| Msa1199870 | Msa1304790 | 0.825591 | 4.313203e-54 | -8.615850e-47 |
| Msa1199870 | Msa1322180 | 0.803477 | 3.422025e-49 | -8.615850e-47 |
| Msa1199870 | Msa1322410 | 0.817400 | 3.363795e-52 | -8.615850e-47 |
| Msa1199870 | Msa1328430 | 0.820537 | 6.510152e-53 | -8.615850e-47 |
| Msa1199870 | Msa1329900 | 0.827935 | 1.188736e-54 | -8.615850e-47 |
| Msa1199870 | Msa1330400 | 0.800890 | 1.165350e-48 | -8.615850e-47 |
| Msa1199870 | Msa1349830 | 0.801409 | 9.125874e-49 | -8.615850e-47 |
| Msa1199870 | Msa1350700 | 0.836449 | 9.299685e-57 | -8.615850e-47 |
| Msa1199870 | Msa1355510 | 0.835107 | 2.034611e-56 | -8.615850e-47 |
| Msa1199870 | Msa1358090 | 0.812918 | 3.329098e-51 | -8.615850e-47 |
| Msa1199870 | Msa1360260 | 0.833873 | 4.152921e-56 | -8.615850e-47 |
| Msa1199870 | Msa1366480 | 0.803509 | 3.370482e-49 | -8.615850e-47 |
| Msa1199870 | Msa1367460 | 0.800490 | 1.406537e-48 | -8.615850e-47 |
| Msa1199870 | Msa1369320 | 0.803326 | 3.677744e-49 | -8.615850e-47 |
| Msa1199870 | Msa1401110 | 0.818204 | 2.214361e-52 | -8.615850e-47 |
| Msa1199870 | Msa1403690 | 0.846419 | 2.198564e-59 | -8.615850e-47 |
| Msa1199870 | Msa1411370 | 0.809923 | 1.488646e-50 | -8.615850e-47 |
| Msa1199870 | Msa1412410 | 0.900530 | 6.682206e-78 | -8.615850e-47 |
| Msa1199870 | Msa1413150 | 0.835547 | 1.574880e-56 | -8.615850e-47 |
| Msa1199870 | Msa1422230 | 0.830704 | 2.527841e-55 | -8.615850e-47 |
| Msa1199870 | Msa1427860 | 0.899557 | 1.761136e-77 | -8.615850e-47 |
| Msa1199870 | Msa1429470 | 0.837153 | 6.147063e-57 | -8.615850e-47 |
| Msa1199870 | Msa1433410 | 0.805217 | 1.485229e-49 | -8.615850e-47 |
| Msa1199870 | Msa1435320 | 0.843928 | 1.036398e-58 | -8.615850e-47 |
| Msa1199870 | Msa1439860 | 0.809044 | 2.298621e-50 | -8.615850e-47 |
| Msa1199870 | Msa1443400 | 0.839895 | 1.205446e-57 | -8.615850e-47 |
| Msa1199870 | Msa1443620 | 0.808257 | 3.385630e-50 | -8.615850e-47 |
| Msa1199870 | Msa1448040 | 0.841826 | 3.754051e-58 | -8.615850e-47 |
| Msa1199870 | Msa1459920 | 0.856533 | 3.016378e-62 | -8.615850e-47 |
| Msa0486980 | Msa1199870 | 0.822877 | 1.872889e-53 | -8.615850e-47 |
| Msa0488580 | Msa1199870 | 0.852838 | 3.549651e-61 | -8.615850e-47 |
| Msa0497690 | Msa1199870 | 0.800950 | 1.132939e-48 | -8.615850e-47 |
| Msa0497860 | Msa1199870 | 0.855665 | 5.415047e-62 | -8.615850e-47 |
| Msa0504700 | Msa1199870 | 0.804612 | 1.987067e-49 | -8.615850e-47 |
| Msa0506370 | Msa1199870 | 0.817022 | 4.089952e-52 | -8.615850e-47 |
| Msa0512640 | Msa1199870 | 0.822538 | 2.245836e-53 | -8.615850e-47 |
| Msa0515540 | Msa1199870 | 0.818623 | 1.779486e-52 | -8.615850e-47 |
| Msa0515590 | Msa1199870 | 0.820277 | 7.468090e-53 | -8.615850e-47 |
| Msa0522170 | Msa1199870 | 0.802942 | 4.416366e-49 | -8.615850e-47 |
| Msa0524260 | Msa1199870 | 0.802392 | 5.734620e-49 | -8.615850e-47 |
| Msa0547060 | Msa1199870 | 0.821039 | 4.989900e-53 | -8.615850e-47 |
| Msa0560280 | Msa1199870 | 0.824554 | 7.581475e-54 | -8.615850e-47 |
| Msa0560460 | Msa1199870 | 0.837146 | 6.173386e-57 | -8.615850e-47 |
| Msa0561110 | Msa1199870 | 0.802276 | 6.058745e-49 | -8.615850e-47 |
| Msa0565180 | Msa1199870 | 0.823198 | 1.576042e-53 | -8.615850e-47 |
| Msa0573950 | Msa1199870 | 0.840495 | 8.401400e-58 | -8.615850e-47 |
| Msa0576560 | Msa1199870 | 0.818203 | 2.216174e-52 | -8.615850e-47 |
| Msa0584580 | Msa1199870 | 0.829173 | 5.970024e-55 | -8.615850e-47 |
| Msa0584600 | Msa1199870 | 0.816680 | 4.880066e-52 | -8.615850e-47 |
| Msa0601790 | Msa1199870 | 0.814568 | 1.441603e-51 | -8.615850e-47 |
| Msa0863940 | Msa1199870 | 0.873674 | 1.224212e-67 | -8.615850e-47 |
| Msa0863990 | Msa1199870 | 0.811532 | 6.679805e-51 | -8.615850e-47 |
| Msa0865810 | Msa1199870 | 0.849686 | 2.758219e-60 | -8.615850e-47 |
| Msa0865820 | Msa1199870 | 0.848681 | 5.247589e-60 | -8.615850e-47 |
| Msa0865830 | Msa1199870 | 0.825577 | 4.345552e-54 | -8.615850e-47 |
| Msa0873910 | Msa1199870 | 0.816509 | 5.331854e-52 | -8.615850e-47 |
| Msa0873940 | Msa1199870 | 0.815240 | 1.022959e-51 | -8.615850e-47 |
| Msa0881510 | Msa1199870 | 0.831416 | 1.690592e-55 | -8.615850e-47 |
| Msa0906680 | Msa1199870 | 0.801785 | 7.642284e-49 | -8.615850e-47 |
| Msa0930740 | Msa1199870 | 0.812995 | 3.202493e-51 | -8.615850e-47 |
| Msa0975960 | Msa1199870 | 0.841068 | 5.946024e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1199870 | MtrunA17_Chr8g0369391 | 99.359 | 312 | 2 | 0 | 1 | 312 | 1 | 312 | 0.0 | 633 |
| Msa1199870 | MtrunA17_Chr5g0409641 | 75.241 | 311 | 76 | 1 | 1 | 311 | 1 | 310 | 2.25e-179 | 497 |
| Msa1199870 | MtrunA17_Chr5g0409651 | 75.884 | 311 | 74 | 1 | 1 | 311 | 1 | 310 | 2.77e-179 | 497 |
| Msa1199870 | MtrunA17_Chr5g0404471 | 48.726 | 314 | 150 | 5 | 2 | 312 | 4 | 309 | 6.39e-96 | 286 |
| Msa1199870 | MtrunA17_Chr3g0144701 | 48.710 | 310 | 152 | 4 | 4 | 312 | 9 | 312 | 1.13e-95 | 285 |
| Msa1199870 | MtrunA17_Chr3g0141691 | 47.588 | 311 | 156 | 3 | 3 | 312 | 4 | 308 | 2.22e-94 | 282 |
| Msa1199870 | MtrunA17_Chr3g0141681 | 46.178 | 314 | 160 | 4 | 2 | 312 | 3 | 310 | 9.18e-93 | 278 |
| Msa1199870 | MtrunA17_Chr4g0035131 | 43.226 | 310 | 169 | 3 | 1 | 309 | 42 | 345 | 6.02e-82 | 252 |
| Msa1199870 | MtrunA17_Chr4g0035111 | 42.671 | 307 | 169 | 3 | 4 | 309 | 7 | 307 | 9.66e-79 | 243 |
| Msa1199870 | MtrunA17_Chr5g0404481 | 40.432 | 324 | 170 | 8 | 3 | 312 | 4 | 318 | 1.15e-73 | 229 |
| Msa1199870 | MtrunA17_Chr5g0404511 | 40.432 | 324 | 170 | 8 | 3 | 312 | 4 | 318 | 1.19e-73 | 229 |
| Msa1199870 | MtrunA17_Chr4g0035121 | 39.677 | 310 | 180 | 3 | 1 | 308 | 1 | 305 | 5.07e-73 | 227 |
| Msa1199870 | MtrunA17_Chr3g0078901 | 42.020 | 307 | 167 | 6 | 3 | 308 | 5 | 301 | 5.61e-71 | 222 |
| Msa1199870 | MtrunA17_Chr3g0078831 | 38.762 | 307 | 177 | 6 | 3 | 308 | 5 | 301 | 7.38e-65 | 206 |
| Msa1199870 | MtrunA17_Chr1g0198771 | 35.127 | 316 | 193 | 6 | 1 | 312 | 11 | 318 | 1.19e-56 | 186 |
| Msa1199870 | MtrunA17_Chr3g0078941 | 38.806 | 201 | 118 | 4 | 108 | 308 | 12 | 207 | 9.31e-40 | 139 |
| Msa1199870 | MtrunA17_Chr3g0078951 | 41.818 | 110 | 55 | 3 | 2 | 110 | 4 | 105 | 1.02e-14 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1199870 | AT1G32100.1 | 65.916 | 311 | 105 | 1 | 2 | 312 | 8 | 317 | 7.98e-156 | 438 |
| Msa1199870 | AT4G13660.1 | 64.309 | 311 | 110 | 1 | 2 | 312 | 8 | 317 | 1.47e-152 | 430 |
| Msa1199870 | AT4G13660.2 | 64.309 | 311 | 110 | 1 | 2 | 312 | 8 | 317 | 1.47e-152 | 430 |
| Msa1199870 | AT1G75280.1 | 46.326 | 313 | 158 | 5 | 2 | 311 | 4 | 309 | 2.77e-89 | 269 |
| Msa1199870 | AT1G75290.1 | 45.048 | 313 | 163 | 4 | 2 | 311 | 4 | 310 | 2.22e-88 | 267 |
| Msa1199870 | AT4G39230.1 | 45.687 | 313 | 161 | 4 | 2 | 312 | 3 | 308 | 3.20e-88 | 266 |
| Msa1199870 | AT1G75290.2 | 45.048 | 313 | 163 | 4 | 2 | 311 | 31 | 337 | 8.89e-88 | 266 |
| Msa1199870 | AT1G75300.1 | 45.370 | 324 | 151 | 5 | 2 | 308 | 4 | 318 | 2.17e-82 | 252 |
| Msa1199870 | AT1G19540.1 | 44.551 | 312 | 166 | 4 | 4 | 312 | 3 | 310 | 1.46e-80 | 247 |
| Msa1199870 | AT1G19540.2 | 46.899 | 258 | 131 | 3 | 4 | 259 | 3 | 256 | 3.15e-70 | 219 |
| Msa1199870 | AT4G34540.1 | 39.935 | 308 | 173 | 4 | 2 | 308 | 6 | 302 | 4.75e-69 | 217 |
Find 90 sgRNAs with CRISPR-Local
Find 260 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTTTCTTGCCTTCGGAATT+TGG | 0.140897 | 8_1:-52179898 | Msa1199870:CDS |
| AAGGAGAGCTTATTGGAATT+TGG | 0.172480 | 8_1:-52179415 | Msa1199870:CDS |
| GGAATTTGGGAGAAACTTAT+TGG | 0.188551 | 8_1:-52179401 | Msa1199870:CDS |
| TGTTTGACAAACTTTGAAAT+AGG | 0.209168 | 8_1:-52179131 | Msa1199870:CDS |
| GCAGACACGCAGTTATAATT+TGG | 0.218419 | 8_1:-52178854 | Msa1199870:three_prime_UTR |
| TCATCAAATGTTACCCTTCC+TGG | 0.228852 | 8_1:+52179841 | None:intergenic |
| CTCTCCCAAGGAGAGCTTAT+TGG | 0.238246 | 8_1:-52179422 | Msa1199870:CDS |
| AAAAGCACAAAATCTCTTAA+AGG | 0.238987 | 8_1:+52178959 | None:intergenic |
| TCCATTATTTAATTAATCTA+AGG | 0.256130 | 8_1:+52180898 | None:intergenic |
| AGAGACAAGGTTCATCTCTT+TGG | 0.275371 | 8_1:-52179697 | Msa1199870:CDS |
| GTTTGACAAACTTTGAAATA+GGG | 0.285880 | 8_1:-52179130 | Msa1199870:CDS |
| AATATTACCAGCTTCTTTGA+TGG | 0.297662 | 8_1:+52180469 | None:intergenic |
| CAAAGAAGCTGGTAATATTA+AGG | 0.300858 | 8_1:-52180465 | Msa1199870:intron |
| AATGCATGTCCCATTCTTGC+TGG | 0.305536 | 8_1:+52179868 | None:intergenic |
| AGGAGAGCTTATTGGAATTT+GGG | 0.315376 | 8_1:-52179414 | Msa1199870:CDS |
| CTATATCTGGTGTTCATATT+AGG | 0.315932 | 8_1:-52180529 | Msa1199870:CDS |
| GCCTTAGATTAATTAAATAA+TGG | 0.316956 | 8_1:-52180899 | Msa1199870:five_prime_UTR |
| CTCTTTGCTGGATACTTTGC+TGG | 0.318255 | 8_1:-52179754 | Msa1199870:CDS |
| CAAGTTCACAAATAAATAAA+AGG | 0.342389 | 8_1:-52180855 | Msa1199870:five_prime_UTR |
| TAGTTCAATTGGGAATAAAC+TGG | 0.349423 | 8_1:-52178937 | Msa1199870:three_prime_UTR |
| TTTGTCTTGGGTCTTTGGTT+TGG | 0.357317 | 8_1:+52180827 | None:intergenic |
| ATCTCTGCTAACCTCTTTGC+TGG | 0.361971 | 8_1:-52179766 | Msa1199870:CDS |
| GGTAACATTTGATGACAAAA+TGG | 0.366837 | 8_1:-52179833 | Msa1199870:CDS |
| TGCTGGAAGCCTCTCTCAGA+TGG | 0.390000 | 8_1:-52179737 | Msa1199870:CDS |
| ACACTAGCGTTTCTTGCCTT+CGG | 0.397251 | 8_1:-52179905 | Msa1199870:intron |
| CTTGGGTCTTTGGTTTGGAC+TGG | 0.402565 | 8_1:+52180832 | None:intergenic |
| TTTGGAGATGGAAAACATAA+AGG | 0.410931 | 8_1:-52179679 | Msa1199870:intron |
| TATAAACTTCAAGTAGCAAT+TGG | 0.419438 | 8_1:-52179182 | Msa1199870:CDS |
| GTTCTAGTAGTGGGAGGAAC+AGG | 0.429745 | 8_1:-52180758 | Msa1199870:CDS |
| TGTTACCTTTCAATGTTGTA+AGG | 0.444547 | 8_1:+52179339 | None:intergenic |
| TGGCCTAGACCCAGCAAGAA+TGG | 0.445117 | 8_1:-52179878 | Msa1199870:CDS |
| CATATTAGGAGTCATAGTAT+TGG | 0.455402 | 8_1:-52180515 | Msa1199870:CDS |
| AGCAAGAATGGGACATGCAT+TGG | 0.455560 | 8_1:-52179866 | Msa1199870:CDS |
| CACAAAATCTCTTAAAGGTA+AGG | 0.456487 | 8_1:+52178964 | None:intergenic |
| GTCCCATTCTTGCTGGGTCT+AGG | 0.460549 | 8_1:+52179875 | None:intergenic |
| AACTTTGAAATAGGGGAAGA+TGG | 0.469119 | 8_1:-52179122 | Msa1199870:CDS |
| AAATTCCAATAAGCTCTCCT+TGG | 0.474182 | 8_1:+52179417 | None:intergenic |
| ATGCATGTCCCATTCTTGCT+GGG | 0.478003 | 8_1:+52179869 | None:intergenic |
| ATGCGTGTGTAATTCACCTC+AGG | 0.480231 | 8_1:+52179077 | None:intergenic |
| GTTGTCATCAGTGCTATATC+TGG | 0.487092 | 8_1:-52180542 | Msa1199870:CDS |
| TTCAAATTGAGAAGATTCAA+AGG | 0.491021 | 8_1:-52180655 | Msa1199870:CDS |
| TCAATTTGAAGTCCCAACTC+TGG | 0.493933 | 8_1:+52180668 | None:intergenic |
| TTGATGACAAAATGGCTGTA+AGG | 0.494907 | 8_1:-52179825 | Msa1199870:CDS |
| ATGGGACATGCATTGGAGCC+AGG | 0.496170 | 8_1:-52179859 | Msa1199870:CDS |
| GCTGGAAGCCTCTCTCAGAT+GGG | 0.496185 | 8_1:-52179736 | Msa1199870:CDS |
| CTTCTTTCATTCAAGAAACA+AGG | 0.497102 | 8_1:-52180632 | Msa1199870:CDS |
| GTGGGAGGAACAGGATACAT+AGG | 0.497938 | 8_1:-52180749 | Msa1199870:CDS |
| GGCCTAGACCCAGCAAGAAT+GGG | 0.499805 | 8_1:-52179877 | Msa1199870:CDS |
| AAGGTTCATCTCTTTGGAGA+TGG | 0.505407 | 8_1:-52179691 | Msa1199870:CDS |
| GAAACTTATTGGAAAGGAGC+TGG | 0.511447 | 8_1:-52179390 | Msa1199870:CDS |
| TTGGGAGAAACTTATTGGAA+AGG | 0.516008 | 8_1:-52179396 | Msa1199870:CDS |
| TTTGACAAACTTTGAAATAG+GGG | 0.526655 | 8_1:-52179129 | Msa1199870:CDS |
| TGTGATTCAAAGGCCAGAGT+TGG | 0.529026 | 8_1:-52180681 | Msa1199870:CDS |
| AAGAGCAAGGTTCTAGTAGT+GGG | 0.529398 | 8_1:-52180767 | Msa1199870:CDS |
| GTGATTCAAAGGCCAGAGTT+GGG | 0.530457 | 8_1:-52180680 | Msa1199870:CDS |
| GGCTTCCTTACAACATTGAA+AGG | 0.541729 | 8_1:-52179344 | Msa1199870:intron |
| TCAAACACAGACATGTTGGT+TGG | 0.542642 | 8_1:-52178996 | Msa1199870:three_prime_UTR |
| AATACTTCCACGTGAGGTAG+TGG | 0.545465 | 8_1:-52179020 | Msa1199870:three_prime_UTR |
| ATGAAACCTATGTGATTCAA+AGG | 0.548412 | 8_1:-52180691 | Msa1199870:CDS |
| AAGAGATGAACCTTGTCTCT+AGG | 0.549631 | 8_1:+52179700 | None:intergenic |
| ATTCACCTCAGGGTAAAGCT+TGG | 0.558374 | 8_1:+52179088 | None:intergenic |
| AATTCCAATAAGCTCTCCTT+GGG | 0.559132 | 8_1:+52179418 | None:intergenic |
| AAAGAGCAAGGTTCTAGTAG+TGG | 0.560042 | 8_1:-52180768 | Msa1199870:CDS |
| GTTGATGCCATCAAAGAAGC+TGG | 0.562038 | 8_1:-52180476 | Msa1199870:CDS |
| TAAATAATGGATATTAAGAG+TGG | 0.563265 | 8_1:-52180886 | Msa1199870:five_prime_UTR |
| TTAGCAGAGATGTAAGTGAA+AGG | 0.563391 | 8_1:+52179778 | None:intergenic |
| GACATGCATTGGAGCCAGGA+AGG | 0.564748 | 8_1:-52179855 | Msa1199870:CDS |
| TCTTGTTGATGCTATCAAGA+AGG | 0.568801 | 8_1:-52180570 | Msa1199870:CDS |
| AATGTTGTAAGGAAGCCCTC+AGG | 0.573144 | 8_1:+52179350 | None:intergenic |
| AGAGAAAATGGAAAAGAGCA+AGG | 0.586777 | 8_1:-52180780 | Msa1199870:exon |
| TGAGGTGAATTACACACGCA+TGG | 0.597960 | 8_1:-52179075 | Msa1199870:CDS |
| CTCTGGCCTTTGAATCACAT+AGG | 0.599139 | 8_1:+52180685 | None:intergenic |
| TGCGTGTGTAATTCACCTCA+GGG | 0.611857 | 8_1:+52179078 | None:intergenic |
| CATAGGAAGAAGAATAGTGA+AGG | 0.614022 | 8_1:-52180732 | Msa1199870:CDS |
| ACATGCATTGGAGCCAGGAA+GGG | 0.617973 | 8_1:-52179854 | Msa1199870:CDS |
| CAAGAAAACATTCTCTCCCA+AGG | 0.620681 | 8_1:-52179434 | Msa1199870:CDS |
| CAGCAAAGTATCCAGCAAAG+AGG | 0.621117 | 8_1:+52179755 | None:intergenic |
| CAAAAGAACCCATCTGAGAG+AGG | 0.622907 | 8_1:+52179728 | None:intergenic |
| TGGTTCAAACACAGACATGT+TGG | 0.624528 | 8_1:-52179000 | Msa1199870:three_prime_UTR |
| AAATGAAATACTTCCACGTG+AGG | 0.644142 | 8_1:-52179026 | Msa1199870:three_prime_UTR |
| ACAAGGTGCTCATATTGTTG+AGG | 0.645307 | 8_1:-52180615 | Msa1199870:CDS |
| GGGTCTAGGCCAAATTCCGA+AGG | 0.645748 | 8_1:+52179889 | None:intergenic |
| GTGAAGGCAAGTTTAGAACA+AGG | 0.646091 | 8_1:-52180716 | Msa1199870:CDS |
| AGCAAGGTTCTAGTAGTGGG+AGG | 0.646523 | 8_1:-52180764 | Msa1199870:CDS |
| AAGACATACATTCCTCCTGA+GGG | 0.654898 | 8_1:-52179365 | Msa1199870:CDS |
| GTTTGAACCACTACCTCACG+TGG | 0.655274 | 8_1:+52179013 | None:intergenic |
| AGATGAACCTTGTCTCTAGG+AGG | 0.656944 | 8_1:+52179703 | None:intergenic |
| GTTGTAAGGAAGCCCTCAGG+AGG | 0.661067 | 8_1:+52179353 | None:intergenic |
| GAAGACATACATTCCTCCTG+AGG | 0.674555 | 8_1:-52179366 | Msa1199870:CDS |
| AGCATCCAAGCTTTACCCTG+AGG | 0.701976 | 8_1:-52179093 | Msa1199870:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTGTTTAATGTTAAAAATT+TGG | - | chr8_1:52179684-52179703 | Msa1199870:CDS | 10.0% |
| !! | TTGTTTAATGTTAAAAATTT+GGG | - | chr8_1:52179685-52179704 | Msa1199870:CDS | 10.0% |
| !!! | ATTTTTACACATAAATTTTT+AGG | + | chr8_1:52180710-52180729 | None:intergenic | 10.0% |
| !! | ATTGTTTAATGTTAAAAATT+TGG | - | chr8_1:52179684-52179703 | Msa1199870:CDS | 10.0% |
| !! | TTGTTTAATGTTAAAAATTT+GGG | - | chr8_1:52179685-52179704 | Msa1199870:CDS | 10.0% |
| !!! | ATTTTTACACATAAATTTTT+AGG | + | chr8_1:52180710-52180729 | None:intergenic | 10.0% |
| !! | TCCATTATTTAATTAATCTA+AGG | + | chr8_1:52178857-52178876 | None:intergenic | 15.0% |
| !! | TATTAAGGTAATTAATTTCT+TGG | - | chr8_1:52179302-52179321 | Msa1199870:intron | 15.0% |
| !! | AAAGATTAAGAAATTAAGAT+AGG | + | chr8_1:52179336-52179355 | None:intergenic | 15.0% |
| !!! | TAAAAGTTTTGAACTTATAA+AGG | + | chr8_1:52180101-52180120 | None:intergenic | 15.0% |
| !! | TCCATTATTTAATTAATCTA+AGG | + | chr8_1:52178857-52178876 | None:intergenic | 15.0% |
| !! | TATTAAGGTAATTAATTTCT+TGG | - | chr8_1:52179302-52179321 | Msa1199870:intron | 15.0% |
| !! | AAAGATTAAGAAATTAAGAT+AGG | + | chr8_1:52179336-52179355 | None:intergenic | 15.0% |
| !!! | TAAAAGTTTTGAACTTATAA+AGG | + | chr8_1:52180101-52180120 | None:intergenic | 15.0% |
| !! | GCCTTAGATTAATTAAATAA+TGG | - | chr8_1:52178853-52178872 | Msa1199870:three_prime_UTR | 20.0% |
| !!! | TAAATAATGGATATTAAGAG+TGG | - | chr8_1:52178866-52178885 | Msa1199870:three_prime_UTR | 20.0% |
| !! | CAAGTTCACAAATAAATAAA+AGG | - | chr8_1:52178897-52178916 | Msa1199870:three_prime_UTR | 20.0% |
| !! | GTATATAATTCATTTGAGAA+AGG | - | chr8_1:52179497-52179516 | Msa1199870:CDS | 20.0% |
| !! | TTAATGACAATATATAGTTC+AGG | + | chr8_1:52179547-52179566 | None:intergenic | 20.0% |
| !! | TAAGTGAAAGACATTTATAT+TGG | - | chr8_1:52179653-52179672 | Msa1199870:intron | 20.0% |
| !! | ATTAGATATTAGATATGCAA+CGG | + | chr8_1:52179728-52179747 | None:intergenic | 20.0% |
| !! | TGTATGTAATTATGTCAAAT+TGG | + | chr8_1:52179786-52179805 | None:intergenic | 20.0% |
| !! | ATTTGACATAATTACATACA+TGG | - | chr8_1:52179786-52179805 | Msa1199870:CDS | 20.0% |
| !!! | AAGGTATAATGTTTTGTTTA+AGG | + | chr8_1:52180292-52180311 | None:intergenic | 20.0% |
| !!! | TTCTATCATATTTTCTATGA+GGG | - | chr8_1:52180597-52180616 | Msa1199870:CDS | 20.0% |
| !! | GCCTTAGATTAATTAAATAA+TGG | - | chr8_1:52178853-52178872 | Msa1199870:three_prime_UTR | 20.0% |
| !!! | TAAATAATGGATATTAAGAG+TGG | - | chr8_1:52178866-52178885 | Msa1199870:three_prime_UTR | 20.0% |
| !! | CAAGTTCACAAATAAATAAA+AGG | - | chr8_1:52178897-52178916 | Msa1199870:three_prime_UTR | 20.0% |
| !! | GTATATAATTCATTTGAGAA+AGG | - | chr8_1:52179497-52179516 | Msa1199870:CDS | 20.0% |
| !! | TTAATGACAATATATAGTTC+AGG | + | chr8_1:52179547-52179566 | None:intergenic | 20.0% |
| !! | TAAGTGAAAGACATTTATAT+TGG | - | chr8_1:52179653-52179672 | Msa1199870:intron | 20.0% |
| !! | ATTAGATATTAGATATGCAA+CGG | + | chr8_1:52179728-52179747 | None:intergenic | 20.0% |
| !! | TGTATGTAATTATGTCAAAT+TGG | + | chr8_1:52179786-52179805 | None:intergenic | 20.0% |
| !! | ATTTGACATAATTACATACA+TGG | - | chr8_1:52179786-52179805 | Msa1199870:CDS | 20.0% |
| !!! | AAGGTATAATGTTTTGTTTA+AGG | + | chr8_1:52180292-52180311 | None:intergenic | 20.0% |
| !!! | TTCTATCATATTTTCTATGA+GGG | - | chr8_1:52180597-52180616 | Msa1199870:CDS | 20.0% |
| ! | TTCAAATTGAGAAGATTCAA+AGG | - | chr8_1:52179097-52179116 | Msa1199870:CDS | 25.0% |
| ! | TTATGTCAAATTGGAAAAAG+AGG | + | chr8_1:52179777-52179796 | None:intergenic | 25.0% |
| ! | TTACTTTCCTAATACATGTA+AGG | + | chr8_1:52180481-52180500 | None:intergenic | 25.0% |
| !!! | TTTATGTGAAATTGATTTGC+AGG | - | chr8_1:52180540-52180559 | Msa1199870:CDS | 25.0% |
| ! | TATAAACTTCAAGTAGCAAT+TGG | - | chr8_1:52180570-52180589 | Msa1199870:CDS | 25.0% |
| !! | CTTCTATCATATTTTCTATG+AGG | - | chr8_1:52180596-52180615 | Msa1199870:CDS | 25.0% |
| !!! | TGTTTGACAAACTTTGAAAT+AGG | - | chr8_1:52180621-52180640 | Msa1199870:CDS | 25.0% |
| !!! | GTTTGACAAACTTTGAAATA+GGG | - | chr8_1:52180622-52180641 | Msa1199870:CDS | 25.0% |
| !!! | TTTGACAAACTTTGAAATAG+GGG | - | chr8_1:52180623-52180642 | Msa1199870:CDS | 25.0% |
| !! | AAAAGCACAAAATCTCTTAA+AGG | + | chr8_1:52180796-52180815 | None:intergenic | 25.0% |
| !!! | TTTTGTGCTTTTAGTTCAAT+TGG | - | chr8_1:52180804-52180823 | Msa1199870:five_prime_UTR | 25.0% |
| !!! | TTTGTGCTTTTAGTTCAATT+GGG | - | chr8_1:52180805-52180824 | Msa1199870:five_prime_UTR | 25.0% |
| ! | TTCAAATTGAGAAGATTCAA+AGG | - | chr8_1:52179097-52179116 | Msa1199870:CDS | 25.0% |
| ! | TTATGTCAAATTGGAAAAAG+AGG | + | chr8_1:52179777-52179796 | None:intergenic | 25.0% |
| ! | TTACTTTCCTAATACATGTA+AGG | + | chr8_1:52180481-52180500 | None:intergenic | 25.0% |
| !!! | TTTATGTGAAATTGATTTGC+AGG | - | chr8_1:52180540-52180559 | Msa1199870:CDS | 25.0% |
| ! | TATAAACTTCAAGTAGCAAT+TGG | - | chr8_1:52180570-52180589 | Msa1199870:CDS | 25.0% |
| !! | CTTCTATCATATTTTCTATG+AGG | - | chr8_1:52180596-52180615 | Msa1199870:CDS | 25.0% |
| !!! | TGTTTGACAAACTTTGAAAT+AGG | - | chr8_1:52180621-52180640 | Msa1199870:CDS | 25.0% |
| !!! | GTTTGACAAACTTTGAAATA+GGG | - | chr8_1:52180622-52180641 | Msa1199870:CDS | 25.0% |
| !!! | TTTGACAAACTTTGAAATAG+GGG | - | chr8_1:52180623-52180642 | Msa1199870:CDS | 25.0% |
| !! | AAAAGCACAAAATCTCTTAA+AGG | + | chr8_1:52180796-52180815 | None:intergenic | 25.0% |
| !!! | TTTTGTGCTTTTAGTTCAAT+TGG | - | chr8_1:52180804-52180823 | Msa1199870:five_prime_UTR | 25.0% |
| !!! | TTTGTGCTTTTAGTTCAATT+GGG | - | chr8_1:52180805-52180824 | Msa1199870:five_prime_UTR | 25.0% |
| ! | TGCTTCAAATGTTTTGTCTT+GGG | + | chr8_1:52178940-52178959 | None:intergenic | 30.0% |
| CAGAAGAAAAAGAGAGAAAA+TGG | - | chr8_1:52178960-52178979 | Msa1199870:three_prime_UTR | 30.0% | |
| ATGAAACCTATGTGATTCAA+AGG | - | chr8_1:52179061-52179080 | Msa1199870:CDS | 30.0% | |
| CTTCTTTCATTCAAGAAACA+AGG | - | chr8_1:52179120-52179139 | Msa1199870:CDS | 30.0% | |
| CTATATCTGGTGTTCATATT+AGG | - | chr8_1:52179223-52179242 | Msa1199870:intron | 30.0% | |
| CATATTAGGAGTCATAGTAT+TGG | - | chr8_1:52179237-52179256 | Msa1199870:intron | 30.0% | |
| AATATTACCAGCTTCTTTGA+TGG | + | chr8_1:52179286-52179305 | None:intergenic | 30.0% | |
| CAAAGAAGCTGGTAATATTA+AGG | - | chr8_1:52179287-52179306 | Msa1199870:intron | 30.0% | |
| TATACAGATTGTGATCGATT+TGG | + | chr8_1:52179482-52179501 | None:intergenic | 30.0% | |
| AAGCTAACCAATCATGTAAT+GGG | + | chr8_1:52179754-52179773 | None:intergenic | 30.0% | |
| ! | GGTAACATTTGATGACAAAA+TGG | - | chr8_1:52179919-52179938 | Msa1199870:intron | 30.0% |
| TTTGGAGATGGAAAACATAA+AGG | - | chr8_1:52180073-52180092 | Msa1199870:intron | 30.0% | |
| !!! | AATGTTTTGTTTAAGGTTCG+AGG | + | chr8_1:52180285-52180304 | None:intergenic | 30.0% |
| TGTTACCTTTCAATGTTGTA+AGG | + | chr8_1:52180416-52180435 | None:intergenic | 30.0% | |
| TTATGCACCTTACATGTATT+AGG | - | chr8_1:52180471-52180490 | Msa1199870:CDS | 30.0% | |
| CAGTTAGTGTAAGTGATTTA+TGG | - | chr8_1:52180516-52180535 | Msa1199870:CDS | 30.0% | |
| CACAAAATCTCTTAAAGGTA+AGG | + | chr8_1:52180791-52180810 | None:intergenic | 30.0% | |
| TAGTTCAATTGGGAATAAAC+TGG | - | chr8_1:52180815-52180834 | Msa1199870:five_prime_UTR | 30.0% | |
| ! | TGCTTCAAATGTTTTGTCTT+GGG | + | chr8_1:52178940-52178959 | None:intergenic | 30.0% |
| CAGAAGAAAAAGAGAGAAAA+TGG | - | chr8_1:52178960-52178979 | Msa1199870:three_prime_UTR | 30.0% | |
| ATGAAACCTATGTGATTCAA+AGG | - | chr8_1:52179061-52179080 | Msa1199870:CDS | 30.0% | |
| CTTCTTTCATTCAAGAAACA+AGG | - | chr8_1:52179120-52179139 | Msa1199870:CDS | 30.0% | |
| CTATATCTGGTGTTCATATT+AGG | - | chr8_1:52179223-52179242 | Msa1199870:intron | 30.0% | |
| CATATTAGGAGTCATAGTAT+TGG | - | chr8_1:52179237-52179256 | Msa1199870:intron | 30.0% | |
| AATATTACCAGCTTCTTTGA+TGG | + | chr8_1:52179286-52179305 | None:intergenic | 30.0% | |
| CAAAGAAGCTGGTAATATTA+AGG | - | chr8_1:52179287-52179306 | Msa1199870:intron | 30.0% | |
| TATACAGATTGTGATCGATT+TGG | + | chr8_1:52179482-52179501 | None:intergenic | 30.0% | |
| AAGCTAACCAATCATGTAAT+GGG | + | chr8_1:52179754-52179773 | None:intergenic | 30.0% | |
| ! | GGTAACATTTGATGACAAAA+TGG | - | chr8_1:52179919-52179938 | Msa1199870:intron | 30.0% |
| TTTGGAGATGGAAAACATAA+AGG | - | chr8_1:52180073-52180092 | Msa1199870:intron | 30.0% | |
| !!! | AATGTTTTGTTTAAGGTTCG+AGG | + | chr8_1:52180285-52180304 | None:intergenic | 30.0% |
| TGTTACCTTTCAATGTTGTA+AGG | + | chr8_1:52180416-52180435 | None:intergenic | 30.0% | |
| TTATGCACCTTACATGTATT+AGG | - | chr8_1:52180471-52180490 | Msa1199870:CDS | 30.0% | |
| CAGTTAGTGTAAGTGATTTA+TGG | - | chr8_1:52180516-52180535 | Msa1199870:CDS | 30.0% | |
| CACAAAATCTCTTAAAGGTA+AGG | + | chr8_1:52180791-52180810 | None:intergenic | 30.0% | |
| TAGTTCAATTGGGAATAAAC+TGG | - | chr8_1:52180815-52180834 | Msa1199870:five_prime_UTR | 30.0% | |
| ! | AATGTTTTGTCTTGGGTCTT+TGG | + | chr8_1:52178933-52178952 | None:intergenic | 35.0% |
| ! | GTGCTTCAAATGTTTTGTCT+TGG | + | chr8_1:52178941-52178960 | None:intergenic | 35.0% |
| AGAGAAAATGGAAAAGAGCA+AGG | - | chr8_1:52178972-52178991 | Msa1199870:three_prime_UTR | 35.0% | |
| CATAGGAAGAAGAATAGTGA+AGG | - | chr8_1:52179020-52179039 | Msa1199870:three_prime_UTR | 35.0% | |
| TCTTGTTGATGCTATCAAGA+AGG | - | chr8_1:52179182-52179201 | Msa1199870:CDS | 35.0% | |
| !! | TGTGATCGATTTGGTCTATA+TGG | + | chr8_1:52179473-52179492 | None:intergenic | 35.0% |
| TGCAACGGTATTCACATATT+GGG | + | chr8_1:52179713-52179732 | None:intergenic | 35.0% | |
| ATGCAACGGTATTCACATAT+TGG | + | chr8_1:52179714-52179733 | None:intergenic | 35.0% | |
| TAATGACCCCATTACATGAT+TGG | - | chr8_1:52179744-52179763 | Msa1199870:CDS | 35.0% | |
| AGCTAACCAATCATGTAATG+GGG | + | chr8_1:52179753-52179772 | None:intergenic | 35.0% | |
| GAAGCTAACCAATCATGTAA+TGG | + | chr8_1:52179755-52179774 | None:intergenic | 35.0% | |
| ! | TTGATGACAAAATGGCTGTA+AGG | - | chr8_1:52179927-52179946 | Msa1199870:intron | 35.0% |
| TTAGCAGAGATGTAAGTGAA+AGG | + | chr8_1:52179977-52179996 | None:intergenic | 35.0% | |
| ! | GAATGTTTTCTTGTGGTCTA+AGG | + | chr8_1:52180311-52180330 | None:intergenic | 35.0% |
| AATTCCAATAAGCTCTCCTT+GGG | + | chr8_1:52180337-52180356 | None:intergenic | 35.0% | |
| AAATTCCAATAAGCTCTCCT+TGG | + | chr8_1:52180338-52180357 | None:intergenic | 35.0% | |
| AAGGAGAGCTTATTGGAATT+TGG | - | chr8_1:52180337-52180356 | Msa1199870:intron | 35.0% | |
| AGGAGAGCTTATTGGAATTT+GGG | - | chr8_1:52180338-52180357 | Msa1199870:intron | 35.0% | |
| GGAATTTGGGAGAAACTTAT+TGG | - | chr8_1:52180351-52180370 | Msa1199870:intron | 35.0% | |
| TTGGGAGAAACTTATTGGAA+AGG | - | chr8_1:52180356-52180375 | Msa1199870:intron | 35.0% | |
| !! | GTGAAATTGATTTGCAGGAT+TGG | - | chr8_1:52180545-52180564 | Msa1199870:CDS | 35.0% |
| !! | AACTTTGAAATAGGGGAAGA+TGG | - | chr8_1:52180630-52180649 | Msa1199870:CDS | 35.0% |
| AAATGAAATACTTCCACGTG+AGG | - | chr8_1:52180726-52180745 | Msa1199870:CDS | 35.0% | |
| ! | AATGTTTTGTCTTGGGTCTT+TGG | + | chr8_1:52178933-52178952 | None:intergenic | 35.0% |
| ! | GTGCTTCAAATGTTTTGTCT+TGG | + | chr8_1:52178941-52178960 | None:intergenic | 35.0% |
| AGAGAAAATGGAAAAGAGCA+AGG | - | chr8_1:52178972-52178991 | Msa1199870:three_prime_UTR | 35.0% | |
| CATAGGAAGAAGAATAGTGA+AGG | - | chr8_1:52179020-52179039 | Msa1199870:three_prime_UTR | 35.0% | |
| TCTTGTTGATGCTATCAAGA+AGG | - | chr8_1:52179182-52179201 | Msa1199870:CDS | 35.0% | |
| !! | TGTGATCGATTTGGTCTATA+TGG | + | chr8_1:52179473-52179492 | None:intergenic | 35.0% |
| TGCAACGGTATTCACATATT+GGG | + | chr8_1:52179713-52179732 | None:intergenic | 35.0% | |
| ATGCAACGGTATTCACATAT+TGG | + | chr8_1:52179714-52179733 | None:intergenic | 35.0% | |
| TAATGACCCCATTACATGAT+TGG | - | chr8_1:52179744-52179763 | Msa1199870:CDS | 35.0% | |
| AGCTAACCAATCATGTAATG+GGG | + | chr8_1:52179753-52179772 | None:intergenic | 35.0% | |
| GAAGCTAACCAATCATGTAA+TGG | + | chr8_1:52179755-52179774 | None:intergenic | 35.0% | |
| ! | TTGATGACAAAATGGCTGTA+AGG | - | chr8_1:52179927-52179946 | Msa1199870:intron | 35.0% |
| TTAGCAGAGATGTAAGTGAA+AGG | + | chr8_1:52179977-52179996 | None:intergenic | 35.0% | |
| ! | GAATGTTTTCTTGTGGTCTA+AGG | + | chr8_1:52180311-52180330 | None:intergenic | 35.0% |
| AATTCCAATAAGCTCTCCTT+GGG | + | chr8_1:52180337-52180356 | None:intergenic | 35.0% | |
| AAATTCCAATAAGCTCTCCT+TGG | + | chr8_1:52180338-52180357 | None:intergenic | 35.0% | |
| AAGGAGAGCTTATTGGAATT+TGG | - | chr8_1:52180337-52180356 | Msa1199870:intron | 35.0% | |
| AGGAGAGCTTATTGGAATTT+GGG | - | chr8_1:52180338-52180357 | Msa1199870:intron | 35.0% | |
| GGAATTTGGGAGAAACTTAT+TGG | - | chr8_1:52180351-52180370 | Msa1199870:intron | 35.0% | |
| TTGGGAGAAACTTATTGGAA+AGG | - | chr8_1:52180356-52180375 | Msa1199870:intron | 35.0% | |
| !! | GTGAAATTGATTTGCAGGAT+TGG | - | chr8_1:52180545-52180564 | Msa1199870:CDS | 35.0% |
| !! | AACTTTGAAATAGGGGAAGA+TGG | - | chr8_1:52180630-52180649 | Msa1199870:CDS | 35.0% |
| AAATGAAATACTTCCACGTG+AGG | - | chr8_1:52180726-52180745 | Msa1199870:CDS | 35.0% | |
| TTTGTCTTGGGTCTTTGGTT+TGG | + | chr8_1:52178928-52178947 | None:intergenic | 40.0% | |
| ! | AAAGAGCAAGGTTCTAGTAG+TGG | - | chr8_1:52178984-52179003 | Msa1199870:three_prime_UTR | 40.0% |
| ! | AAGAGCAAGGTTCTAGTAGT+GGG | - | chr8_1:52178985-52179004 | Msa1199870:three_prime_UTR | 40.0% |
| ! | GTGAAGGCAAGTTTAGAACA+AGG | - | chr8_1:52179036-52179055 | Msa1199870:exon | 40.0% |
| ! | TCAATTTGAAGTCCCAACTC+TGG | + | chr8_1:52179087-52179106 | None:intergenic | 40.0% |
| ! | ACAAGGTGCTCATATTGTTG+AGG | - | chr8_1:52179137-52179156 | Msa1199870:CDS | 40.0% |
| GTTGTCATCAGTGCTATATC+TGG | - | chr8_1:52179210-52179229 | Msa1199870:intron | 40.0% | |
| !! | CGATTTGGTCTATATGGTTC+AGG | + | chr8_1:52179467-52179486 | None:intergenic | 40.0% |
| TCATCAAATGTTACCCTTCC+TGG | + | chr8_1:52179914-52179933 | None:intergenic | 40.0% | |
| AAGAGATGAACCTTGTCTCT+AGG | + | chr8_1:52180055-52180074 | None:intergenic | 40.0% | |
| AGAGACAAGGTTCATCTCTT+TGG | - | chr8_1:52180055-52180074 | Msa1199870:intron | 40.0% | |
| ! | AAGGTTCATCTCTTTGGAGA+TGG | - | chr8_1:52180061-52180080 | Msa1199870:intron | 40.0% |
| ! | TGGGAGAGAATGTTTTCTTG+TGG | + | chr8_1:52180318-52180337 | None:intergenic | 40.0% |
| CAAGAAAACATTCTCTCCCA+AGG | - | chr8_1:52180318-52180337 | Msa1199870:intron | 40.0% | |
| GAAACTTATTGGAAAGGAGC+TGG | - | chr8_1:52180362-52180381 | Msa1199870:intron | 40.0% | |
| AAGACATACATTCCTCCTGA+GGG | - | chr8_1:52180387-52180406 | Msa1199870:intron | 40.0% | |
| GGCTTCCTTACAACATTGAA+AGG | - | chr8_1:52180408-52180427 | Msa1199870:intron | 40.0% | |
| TGGTTCAAACACAGACATGT+TGG | - | chr8_1:52180752-52180771 | Msa1199870:CDS | 40.0% | |
| TCAAACACAGACATGTTGGT+TGG | - | chr8_1:52180756-52180775 | Msa1199870:CDS | 40.0% | |
| GCAGACACGCAGTTATAATT+TGG | - | chr8_1:52180898-52180917 | Msa1199870:five_prime_UTR | 40.0% | |
| TTTGTCTTGGGTCTTTGGTT+TGG | + | chr8_1:52178928-52178947 | None:intergenic | 40.0% | |
| ! | AAAGAGCAAGGTTCTAGTAG+TGG | - | chr8_1:52178984-52179003 | Msa1199870:three_prime_UTR | 40.0% |
| ! | AAGAGCAAGGTTCTAGTAGT+GGG | - | chr8_1:52178985-52179004 | Msa1199870:three_prime_UTR | 40.0% |
| ! | GTGAAGGCAAGTTTAGAACA+AGG | - | chr8_1:52179036-52179055 | Msa1199870:exon | 40.0% |
| ! | TCAATTTGAAGTCCCAACTC+TGG | + | chr8_1:52179087-52179106 | None:intergenic | 40.0% |
| ! | ACAAGGTGCTCATATTGTTG+AGG | - | chr8_1:52179137-52179156 | Msa1199870:CDS | 40.0% |
| GTTGTCATCAGTGCTATATC+TGG | - | chr8_1:52179210-52179229 | Msa1199870:intron | 40.0% | |
| !! | CGATTTGGTCTATATGGTTC+AGG | + | chr8_1:52179467-52179486 | None:intergenic | 40.0% |
| TCATCAAATGTTACCCTTCC+TGG | + | chr8_1:52179914-52179933 | None:intergenic | 40.0% | |
| AAGAGATGAACCTTGTCTCT+AGG | + | chr8_1:52180055-52180074 | None:intergenic | 40.0% | |
| AGAGACAAGGTTCATCTCTT+TGG | - | chr8_1:52180055-52180074 | Msa1199870:intron | 40.0% | |
| ! | AAGGTTCATCTCTTTGGAGA+TGG | - | chr8_1:52180061-52180080 | Msa1199870:intron | 40.0% |
| ! | TGGGAGAGAATGTTTTCTTG+TGG | + | chr8_1:52180318-52180337 | None:intergenic | 40.0% |
| CAAGAAAACATTCTCTCCCA+AGG | - | chr8_1:52180318-52180337 | Msa1199870:intron | 40.0% | |
| GAAACTTATTGGAAAGGAGC+TGG | - | chr8_1:52180362-52180381 | Msa1199870:intron | 40.0% | |
| AAGACATACATTCCTCCTGA+GGG | - | chr8_1:52180387-52180406 | Msa1199870:intron | 40.0% | |
| GGCTTCCTTACAACATTGAA+AGG | - | chr8_1:52180408-52180427 | Msa1199870:intron | 40.0% | |
| TGGTTCAAACACAGACATGT+TGG | - | chr8_1:52180752-52180771 | Msa1199870:CDS | 40.0% | |
| TCAAACACAGACATGTTGGT+TGG | - | chr8_1:52180756-52180775 | Msa1199870:CDS | 40.0% | |
| GCAGACACGCAGTTATAATT+TGG | - | chr8_1:52180898-52180917 | Msa1199870:five_prime_UTR | 40.0% | |
| ! | CTCTGGCCTTTGAATCACAT+AGG | + | chr8_1:52179070-52179089 | None:intergenic | 45.0% |
| TGTGATTCAAAGGCCAGAGT+TGG | - | chr8_1:52179071-52179090 | Msa1199870:CDS | 45.0% | |
| GTGATTCAAAGGCCAGAGTT+GGG | - | chr8_1:52179072-52179091 | Msa1199870:CDS | 45.0% | |
| GTTGATGCCATCAAAGAAGC+TGG | - | chr8_1:52179276-52179295 | Msa1199870:intron | 45.0% | |
| ACACTAGCGTTTCTTGCCTT+CGG | - | chr8_1:52179847-52179866 | Msa1199870:CDS | 45.0% | |
| CGTTTCTTGCCTTCGGAATT+TGG | - | chr8_1:52179854-52179873 | Msa1199870:CDS | 45.0% | |
| ATGCATGTCCCATTCTTGCT+GGG | + | chr8_1:52179886-52179905 | None:intergenic | 45.0% | |
| AATGCATGTCCCATTCTTGC+TGG | + | chr8_1:52179887-52179906 | None:intergenic | 45.0% | |
| AGCAAGAATGGGACATGCAT+TGG | - | chr8_1:52179886-52179905 | Msa1199870:CDS | 45.0% | |
| ATCTCTGCTAACCTCTTTGC+TGG | - | chr8_1:52179986-52180005 | Msa1199870:intron | 45.0% | |
| ! | CAGCAAAGTATCCAGCAAAG+AGG | + | chr8_1:52180000-52180019 | None:intergenic | 45.0% |
| CTCTTTGCTGGATACTTTGC+TGG | - | chr8_1:52179998-52180017 | Msa1199870:intron | 45.0% | |
| CAAAAGAACCCATCTGAGAG+AGG | + | chr8_1:52180027-52180046 | None:intergenic | 45.0% | |
| ! | TTTTGTGCCTCCTAGAGACA+AGG | - | chr8_1:52180042-52180061 | Msa1199870:intron | 45.0% |
| AGATGAACCTTGTCTCTAGG+AGG | + | chr8_1:52180052-52180071 | None:intergenic | 45.0% | |
| GAAGACATACATTCCTCCTG+AGG | - | chr8_1:52180386-52180405 | Msa1199870:intron | 45.0% | |
| AATGTTGTAAGGAAGCCCTC+AGG | + | chr8_1:52180405-52180424 | None:intergenic | 45.0% | |
| ATTCACCTCAGGGTAAAGCT+TGG | + | chr8_1:52180667-52180686 | None:intergenic | 45.0% | |
| TGCGTGTGTAATTCACCTCA+GGG | + | chr8_1:52180677-52180696 | None:intergenic | 45.0% | |
| ATGCGTGTGTAATTCACCTC+AGG | + | chr8_1:52180678-52180697 | None:intergenic | 45.0% | |
| TGAGGTGAATTACACACGCA+TGG | - | chr8_1:52180677-52180696 | Msa1199870:CDS | 45.0% | |
| AATACTTCCACGTGAGGTAG+TGG | - | chr8_1:52180732-52180751 | Msa1199870:CDS | 45.0% | |
| ! | CTCTGGCCTTTGAATCACAT+AGG | + | chr8_1:52179070-52179089 | None:intergenic | 45.0% |
| TGTGATTCAAAGGCCAGAGT+TGG | - | chr8_1:52179071-52179090 | Msa1199870:CDS | 45.0% | |
| GTGATTCAAAGGCCAGAGTT+GGG | - | chr8_1:52179072-52179091 | Msa1199870:CDS | 45.0% | |
| GTTGATGCCATCAAAGAAGC+TGG | - | chr8_1:52179276-52179295 | Msa1199870:intron | 45.0% | |
| ACACTAGCGTTTCTTGCCTT+CGG | - | chr8_1:52179847-52179866 | Msa1199870:CDS | 45.0% | |
| CGTTTCTTGCCTTCGGAATT+TGG | - | chr8_1:52179854-52179873 | Msa1199870:CDS | 45.0% | |
| ATGCATGTCCCATTCTTGCT+GGG | + | chr8_1:52179886-52179905 | None:intergenic | 45.0% | |
| AATGCATGTCCCATTCTTGC+TGG | + | chr8_1:52179887-52179906 | None:intergenic | 45.0% | |
| AGCAAGAATGGGACATGCAT+TGG | - | chr8_1:52179886-52179905 | Msa1199870:CDS | 45.0% | |
| ATCTCTGCTAACCTCTTTGC+TGG | - | chr8_1:52179986-52180005 | Msa1199870:intron | 45.0% | |
| ! | CAGCAAAGTATCCAGCAAAG+AGG | + | chr8_1:52180000-52180019 | None:intergenic | 45.0% |
| CTCTTTGCTGGATACTTTGC+TGG | - | chr8_1:52179998-52180017 | Msa1199870:intron | 45.0% | |
| CAAAAGAACCCATCTGAGAG+AGG | + | chr8_1:52180027-52180046 | None:intergenic | 45.0% | |
| ! | TTTTGTGCCTCCTAGAGACA+AGG | - | chr8_1:52180042-52180061 | Msa1199870:intron | 45.0% |
| AGATGAACCTTGTCTCTAGG+AGG | + | chr8_1:52180052-52180071 | None:intergenic | 45.0% | |
| GAAGACATACATTCCTCCTG+AGG | - | chr8_1:52180386-52180405 | Msa1199870:intron | 45.0% | |
| AATGTTGTAAGGAAGCCCTC+AGG | + | chr8_1:52180405-52180424 | None:intergenic | 45.0% | |
| ATTCACCTCAGGGTAAAGCT+TGG | + | chr8_1:52180667-52180686 | None:intergenic | 45.0% | |
| TGCGTGTGTAATTCACCTCA+GGG | + | chr8_1:52180677-52180696 | None:intergenic | 45.0% | |
| ATGCGTGTGTAATTCACCTC+AGG | + | chr8_1:52180678-52180697 | None:intergenic | 45.0% | |
| TGAGGTGAATTACACACGCA+TGG | - | chr8_1:52180677-52180696 | Msa1199870:CDS | 45.0% | |
| AATACTTCCACGTGAGGTAG+TGG | - | chr8_1:52180732-52180751 | Msa1199870:CDS | 45.0% | |
| !! | CTTGGGTCTTTGGTTTGGAC+TGG | + | chr8_1:52178923-52178942 | None:intergenic | 50.0% |
| ! | AGCAAGGTTCTAGTAGTGGG+AGG | - | chr8_1:52178988-52179007 | Msa1199870:three_prime_UTR | 50.0% |
| ! | GTTCTAGTAGTGGGAGGAAC+AGG | - | chr8_1:52178994-52179013 | Msa1199870:three_prime_UTR | 50.0% |
| GTGGGAGGAACAGGATACAT+AGG | - | chr8_1:52179003-52179022 | Msa1199870:three_prime_UTR | 50.0% | |
| ACATGCATTGGAGCCAGGAA+GGG | - | chr8_1:52179898-52179917 | Msa1199870:CDS | 50.0% | |
| CTCTCCCAAGGAGAGCTTAT+TGG | - | chr8_1:52180330-52180349 | Msa1199870:intron | 50.0% | |
| AGCATCCAAGCTTTACCCTG+AGG | - | chr8_1:52180659-52180678 | Msa1199870:CDS | 50.0% | |
| GTTTGAACCACTACCTCACG+TGG | + | chr8_1:52180742-52180761 | None:intergenic | 50.0% | |
| !! | CTTGGGTCTTTGGTTTGGAC+TGG | + | chr8_1:52178923-52178942 | None:intergenic | 50.0% |
| ! | AGCAAGGTTCTAGTAGTGGG+AGG | - | chr8_1:52178988-52179007 | Msa1199870:three_prime_UTR | 50.0% |
| ! | GTTCTAGTAGTGGGAGGAAC+AGG | - | chr8_1:52178994-52179013 | Msa1199870:three_prime_UTR | 50.0% |
| GTGGGAGGAACAGGATACAT+AGG | - | chr8_1:52179003-52179022 | Msa1199870:three_prime_UTR | 50.0% | |
| ACATGCATTGGAGCCAGGAA+GGG | - | chr8_1:52179898-52179917 | Msa1199870:CDS | 50.0% | |
| CTCTCCCAAGGAGAGCTTAT+TGG | - | chr8_1:52180330-52180349 | Msa1199870:intron | 50.0% | |
| AGCATCCAAGCTTTACCCTG+AGG | - | chr8_1:52180659-52180678 | Msa1199870:CDS | 50.0% | |
| GTTTGAACCACTACCTCACG+TGG | + | chr8_1:52180742-52180761 | None:intergenic | 50.0% | |
| GGGTCTAGGCCAAATTCCGA+AGG | + | chr8_1:52179866-52179885 | None:intergenic | 55.0% | |
| TGGCCTAGACCCAGCAAGAA+TGG | - | chr8_1:52179874-52179893 | Msa1199870:CDS | 55.0% | |
| GGCCTAGACCCAGCAAGAAT+GGG | - | chr8_1:52179875-52179894 | Msa1199870:CDS | 55.0% | |
| GTCCCATTCTTGCTGGGTCT+AGG | + | chr8_1:52179880-52179899 | None:intergenic | 55.0% | |
| ATGGGACATGCATTGGAGCC+AGG | - | chr8_1:52179893-52179912 | Msa1199870:CDS | 55.0% | |
| GACATGCATTGGAGCCAGGA+AGG | - | chr8_1:52179897-52179916 | Msa1199870:CDS | 55.0% | |
| TGCTGGAAGCCTCTCTCAGA+TGG | - | chr8_1:52180015-52180034 | Msa1199870:intron | 55.0% | |
| GCTGGAAGCCTCTCTCAGAT+GGG | - | chr8_1:52180016-52180035 | Msa1199870:intron | 55.0% | |
| GTTGTAAGGAAGCCCTCAGG+AGG | + | chr8_1:52180402-52180421 | None:intergenic | 55.0% | |
| GGGTCTAGGCCAAATTCCGA+AGG | + | chr8_1:52179866-52179885 | None:intergenic | 55.0% | |
| TGGCCTAGACCCAGCAAGAA+TGG | - | chr8_1:52179874-52179893 | Msa1199870:CDS | 55.0% | |
| GGCCTAGACCCAGCAAGAAT+GGG | - | chr8_1:52179875-52179894 | Msa1199870:CDS | 55.0% | |
| GTCCCATTCTTGCTGGGTCT+AGG | + | chr8_1:52179880-52179899 | None:intergenic | 55.0% | |
| ATGGGACATGCATTGGAGCC+AGG | - | chr8_1:52179893-52179912 | Msa1199870:CDS | 55.0% | |
| GACATGCATTGGAGCCAGGA+AGG | - | chr8_1:52179897-52179916 | Msa1199870:CDS | 55.0% | |
| TGCTGGAAGCCTCTCTCAGA+TGG | - | chr8_1:52180015-52180034 | Msa1199870:intron | 55.0% | |
| GCTGGAAGCCTCTCTCAGAT+GGG | - | chr8_1:52180016-52180035 | Msa1199870:intron | 55.0% | |
| GTTGTAAGGAAGCCCTCAGG+AGG | + | chr8_1:52180402-52180421 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 52178840 | 52180934 | 52178840 | ID=Msa1199870;Name=Msa1199870 |
| chr8_1 | mRNA | 52178840 | 52180934 | 52178840 | ID=Msa1199870-mRNA-1;Parent=Msa1199870;Name=Msa1199870-mRNA-1;_AED=0.06;_eAED=0.06;_QI=139|1|1|1|1|1|4|209|312 |
| chr8_1 | exon | 52178840 | 52179212 | 52178840 | ID=Msa1199870-mRNA-1:exon:16635;Parent=Msa1199870-mRNA-1 |
| chr8_1 | exon | 52179345 | 52179548 | 52179345 | ID=Msa1199870-mRNA-1:exon:16634;Parent=Msa1199870-mRNA-1 |
| chr8_1 | exon | 52179680 | 52179920 | 52179680 | ID=Msa1199870-mRNA-1:exon:16633;Parent=Msa1199870-mRNA-1 |
| chr8_1 | exon | 52180466 | 52180934 | 52180466 | ID=Msa1199870-mRNA-1:exon:16632;Parent=Msa1199870-mRNA-1 |
| chr8_1 | five_prime_UTR | 52180796 | 52180934 | 52180796 | ID=Msa1199870-mRNA-1:five_prime_utr;Parent=Msa1199870-mRNA-1 |
| chr8_1 | CDS | 52180466 | 52180795 | 52180466 | ID=Msa1199870-mRNA-1:cds;Parent=Msa1199870-mRNA-1 |
| chr8_1 | CDS | 52179680 | 52179920 | 52179680 | ID=Msa1199870-mRNA-1:cds;Parent=Msa1199870-mRNA-1 |
| chr8_1 | CDS | 52179345 | 52179548 | 52179345 | ID=Msa1199870-mRNA-1:cds;Parent=Msa1199870-mRNA-1 |
| chr8_1 | CDS | 52179049 | 52179212 | 52179049 | ID=Msa1199870-mRNA-1:cds;Parent=Msa1199870-mRNA-1 |
| chr8_1 | three_prime_UTR | 52178840 | 52179048 | 52178840 | ID=Msa1199870-mRNA-1:three_prime_utr;Parent=Msa1199870-mRNA-1 |
| Gene Sequence |
| Protein sequence |
