AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0330030

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0330030 MtrunA17_Chr2g0312321 99.349 307 1 1 1 307 1 306 0.0 640
Msa0330030 MtrunA17_Chr4g0060931 44.558 294 127 11 1 262 1 290 1.66e-67 214
Msa0330030 MtrunA17_Chr1g0183741 47.280 239 106 5 7 241 6 228 1.77e-67 212
Msa0330030 MtrunA17_Chr6g0484441 47.982 223 108 4 7 226 1 218 2.38e-67 213
Msa0330030 MtrunA17_Chr7g0261411 63.226 155 48 3 7 157 6 155 3.35e-67 211
Msa0330030 MtrunA17_Chr6g0453451 51.724 203 93 3 10 208 19 220 3.07e-65 207
Msa0330030 MtrunA17_Chr7g0253011 55.276 199 70 7 11 192 17 213 6.33e-65 209
Msa0330030 MtrunA17_Chr2g0316971 62.420 157 54 3 8 159 20 176 1.25e-62 202
Msa0330030 MtrunA17_Chr6g0461661 53.723 188 75 5 11 186 18 205 1.49e-61 200
Msa0330030 MtrunA17_Chr3g0091921 51.741 201 81 5 1 187 1 199 1.75e-61 197
Msa0330030 MtrunA17_Chr1g0147421 57.229 166 63 3 8 168 24 186 2.29e-61 199
Msa0330030 MtrunA17_Chr3g0139331 58.333 156 56 4 8 158 8 159 5.49e-59 192
Msa0330030 MtrunA17_Chr2g0309891 56.098 164 68 2 6 165 1 164 6.68e-57 187
Msa0330030 MtrunA17_Chr1g0200561 53.797 158 63 4 7 158 15 168 1.20e-55 184
Msa0330030 MtrunA17_Chr4g0018391 55.128 156 60 4 9 158 5 156 1.21e-55 184
Msa0330030 MtrunA17_Chr4g0056541 54.321 162 66 3 9 165 5 163 7.72e-55 182
Msa0330030 MtrunA17_Chr5g0398971 42.570 249 123 9 1 237 1 241 6.36e-54 179
Msa0330030 MtrunA17_Chr5g0405211 52.532 158 65 4 7 158 4 157 9.86e-54 179
Msa0330030 MtrunA17_Chr8g0372121 49.697 165 75 3 6 165 1 162 1.61e-53 177
Msa0330030 MtrunA17_Chr3g0144271 58.273 139 53 2 8 141 20 158 3.72e-53 179
Msa0330030 MtrunA17_Chr4g0017921 52.500 160 67 3 4 158 1 156 6.23e-53 177
Msa0330030 MtrunA17_Chr7g0217721 42.424 231 109 7 8 217 16 243 1.22e-52 176
Msa0330030 MtrunA17_Chr8g0346001 48.824 170 74 4 8 164 12 181 5.10e-52 176
Msa0330030 MtrunA17_Chr8g0359921 35.093 322 174 8 6 301 9 321 7.70e-52 173
Msa0330030 MtrunA17_Chr3g0109821 51.744 172 76 3 6 173 1 169 5.60e-51 178
Msa0330030 MtrunA17_Chr7g0252971 46.199 171 78 3 8 164 5 175 8.33e-51 171
Msa0330030 MtrunA17_Chr2g0309331 50.955 157 68 4 8 158 7 160 1.44e-50 170
Msa0330030 MtrunA17_Chr2g0318081 49.398 166 74 4 6 166 11 171 4.50e-50 169
Msa0330030 MtrunA17_Chr7g0217711 57.576 132 52 2 8 136 16 146 1.35e-49 162
Msa0330030 MtrunA17_Chr5g0417791 49.351 154 73 3 10 158 2 155 1.98e-49 165
Msa0330030 MtrunA17_Chr6g0481091 47.953 171 84 3 6 172 1 170 2.75e-49 164
Msa0330030 MtrunA17_Chr7g0263931 51.572 159 62 4 8 155 8 162 3.39e-49 166
Msa0330030 MtrunA17_Chr5g0433781 48.087 183 87 4 6 184 1 179 1.37e-48 171
Msa0330030 MtrunA17_Chr3g0124761 40.476 252 116 7 8 227 4 253 1.79e-48 163
Msa0330030 MtrunA17_Chr4g0042561 47.799 159 78 3 5 158 3 161 2.24e-48 162
Msa0330030 MtrunA17_Chr2g0318101 48.485 165 71 4 8 158 12 176 4.03e-48 164
Msa0330030 MtrunA17_Chr8g0384721 41.048 229 112 7 10 225 6 224 4.37e-48 162
Msa0330030 MtrunA17_Chr7g0214071 46.196 184 74 6 8 175 12 186 1.57e-47 160
Msa0330030 MtrunA17_Chr4g0047841 43.979 191 81 4 11 175 15 205 2.04e-47 162
Msa0330030 MtrunA17_Chr6g0453131 49.390 164 72 4 11 163 15 178 1.56e-46 161
Msa0330030 MtrunA17_Chr2g0326361 48.026 152 72 3 11 155 14 165 1.55e-45 157
Msa0330030 MtrunA17_Chr8g0361731 46.199 171 80 4 7 165 10 180 1.11e-44 156
Msa0330030 MtrunA17_Chr3g0130731 50.314 159 74 4 8 162 4 161 1.31e-44 153
Msa0330030 MtrunA17_Chr5g0428991 49.689 161 66 4 10 161 24 178 9.42e-44 158
Msa0330030 MtrunA17_Chr5g0417001 45.087 173 84 4 7 168 10 182 9.97e-44 154
Msa0330030 MtrunA17_Chr3g0128151 48.750 160 67 4 11 161 22 175 1.47e-42 154
Msa0330030 MtrunA17_Chr2g0311661 36.508 252 130 7 13 234 23 274 2.14e-42 147
Msa0330030 MtrunA17_Chr5g0400461 47.024 168 74 4 6 162 1 164 4.41e-42 148
Msa0330030 MtrunA17_Chr3g0130101 49.383 162 68 6 6 158 1 157 6.67e-42 148
Msa0330030 MtrunA17_Chr3g0092671 48.701 154 68 4 13 159 7 156 2.81e-41 150
Msa0330030 MtrunA17_Chr2g0311651 38.174 241 109 8 13 225 24 252 3.27e-41 145
Msa0330030 MtrunA17_Chr4g0076731 38.306 248 130 7 13 251 56 289 3.51e-41 148
Msa0330030 MtrunA17_Chr4g0054791 47.953 171 74 6 6 164 1 168 1.20e-40 144
Msa0330030 MtrunA17_Chr5g0442771 40.094 212 93 6 13 195 20 226 1.27e-40 143
Msa0330030 MtrunA17_Chr1g0197351 47.826 161 69 4 11 159 42 199 4.92e-40 145
Msa0330030 MtrunA17_Chr3g0128111 40.000 200 104 7 14 204 45 237 6.90e-40 140
Msa0330030 MtrunA17_Chr1g0197361 47.712 153 71 4 13 159 10 159 1.92e-39 145
Msa0330030 MtrunA17_Chr8g0364791 43.671 158 82 4 6 158 1 156 1.05e-37 139
Msa0330030 MtrunA17_Chr3g0113001 44.509 173 70 5 58 217 14 173 2.15e-37 135
Msa0330030 MtrunA17_Chr8g0384201 42.767 159 82 4 6 158 1 156 1.16e-36 137
Msa0330030 MtrunA17_Chr4g0038751 43.373 166 78 5 1 158 4 161 1.54e-36 132
Msa0330030 MtrunA17_Chr1g0201021 51.181 127 58 3 13 135 21 147 2.79e-36 137
Msa0330030 MtrunA17_Chr8g0345671 45.395 152 69 5 11 155 11 155 1.03e-34 130
Msa0330030 MtrunA17_Chr3g0131911 39.877 163 85 5 9 160 12 172 4.94e-33 122
Msa0330030 MtrunA17_Chr8g0385991 38.125 160 89 5 9 160 12 169 1.46e-32 120
Msa0330030 MtrunA17_Chr8g0345691 43.421 152 72 5 11 155 12 156 3.13e-32 123
Msa0330030 MtrunA17_Chr2g0321631 41.509 159 76 7 12 156 5 160 1.73e-31 118
Msa0330030 MtrunA17_Chr3g0113031 44.304 158 65 4 72 217 3 149 1.10e-30 116
Msa0330030 MtrunA17_Chr4g0026141 38.650 163 84 6 7 156 1 160 1.38e-30 115
Msa0330030 MtrunA17_Chr2g0321741 42.276 123 61 3 35 155 17 131 2.05e-27 109
Msa0330030 MtrunA17_Chr8g0345711 39.568 139 76 4 2 133 3 140 4.96e-27 103
Msa0330030 MtrunA17_Chr4g0050701 33.690 187 103 5 1 176 1 177 1.33e-26 103
Msa0330030 MtrunA17_Chr8g0345701 41.667 144 60 6 11 133 7 147 1.13e-24 97.8
Msa0330030 MtrunA17_Chr7g0266701 31.792 173 102 5 11 167 4 176 3.68e-24 98.6
Msa0330030 MtrunA17_Chr7g0243371 46.512 86 44 1 63 146 18 103 2.20e-22 90.1
Msa0330030 MtrunA17_Chr8g0384351 35.882 170 82 8 9 175 8 153 6.86e-22 90.9
Msa0330030 MtrunA17_Chr8g0345731 39.850 133 69 6 11 133 24 155 1.71e-21 89.4
Msa0330030 MtrunA17_Chr8g0345721 34.194 155 65 5 14 132 38 191 5.78e-21 89.0
Msa0330030 MtrunA17_Chr8g0345741 38.655 119 65 4 22 133 2 119 8.99e-21 87.0
Msa0330030 MtrunA17_Chr3g0130321 31.217 189 101 7 9 178 5 183 5.73e-20 86.3
Msa0330030 MtrunA17_Chr7g0251651 27.684 177 122 4 10 182 17 191 1.89e-15 73.6
Msa0330030 MtrunA17_Chr7g0251661 27.703 148 99 5 4 146 3 147 4.15e-14 68.9
Msa0330030 MtrunA17_Chr7g0251671 27.632 152 94 5 4 146 3 147 1.39e-13 67.4
Msa0330030 MtrunA17_Chr3g0113011 59.184 49 16 2 10 55 18 65 1.18e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0330030 AT1G56010.2 60.248 322 102 10 2 305 10 323 2.86e-127 366
Msa0330030 AT3G12977.1 54.839 310 92 11 3 305 10 278 4.66e-104 305
Msa0330030 AT1G56010.1 58.712 264 84 10 58 305 2 256 7.97e-94 279
Msa0330030 AT3G12977.2 48.571 280 85 11 30 305 1 225 6.03e-72 222
Msa0330030 AT5G61430.1 51.464 239 94 7 11 232 16 249 4.22e-69 218
Msa0330030 AT3G18400.1 62.987 154 53 2 7 158 1 152 4.34e-68 215
Msa0330030 AT5G07680.2 44.850 301 136 8 11 298 3 286 2.23e-66 211
Msa0330030 AT5G07680.1 44.850 301 136 8 11 298 17 300 2.44e-66 211
Msa0330030 AT5G18270.1 60.870 161 59 3 11 167 21 181 6.59e-65 207
Msa0330030 AT5G18270.2 60.870 161 59 3 11 167 21 181 6.73e-65 207
Msa0330030 AT5G39610.1 51.643 213 91 5 4 208 9 217 6.69e-64 203
Msa0330030 AT4G28530.1 57.143 175 50 4 7 161 6 175 4.57e-63 203
Msa0330030 AT3G04060.1 46.154 247 117 6 11 243 20 264 3.77e-62 201
Msa0330030 AT1G76420.1 60.000 155 56 3 8 158 19 171 5.30e-62 200
Msa0330030 AT5G53950.1 61.635 159 56 3 11 164 17 175 6.04e-61 198
Msa0330030 AT3G29035.1 48.908 229 95 8 11 220 24 249 7.27e-61 196
Msa0330030 AT3G15170.1 48.230 226 92 5 8 220 17 230 2.14e-60 195
Msa0330030 AT2G24430.2 59.615 156 55 4 8 158 13 165 5.20e-60 194
Msa0330030 AT2G24430.1 59.615 156 55 4 8 158 13 165 5.20e-60 194
Msa0330030 AT1G71930.2 52.439 164 66 5 1 158 1 158 4.38e-56 184
Msa0330030 AT1G71930.1 52.439 164 66 5 1 158 1 158 4.38e-56 184
Msa0330030 AT1G12260.2 39.262 298 133 11 9 270 5 290 1.26e-55 184
Msa0330030 AT2G18060.3 46.465 198 93 5 6 193 4 198 3.80e-55 183
Msa0330030 AT2G18060.1 46.465 198 93 5 6 193 4 198 3.80e-55 183
Msa0330030 AT4G36160.1 54.248 153 62 3 11 158 10 159 2.94e-54 181
Msa0330030 AT4G36160.3 54.248 153 62 3 11 158 10 159 2.94e-54 181
Msa0330030 AT4G36160.2 54.248 153 62 3 11 158 14 163 3.38e-54 181
Msa0330030 AT1G12260.1 50.000 180 76 5 9 178 5 180 3.59e-54 181
Msa0330030 AT5G62380.2 56.410 156 58 4 9 158 5 156 4.14e-54 180
Msa0330030 AT5G62380.1 56.410 156 58 4 9 158 5 156 4.14e-54 180
Msa0330030 AT1G62700.1 49.206 189 80 6 9 191 5 183 3.10e-53 179
Msa0330030 AT1G62700.2 49.206 189 80 6 9 191 5 183 3.10e-53 179
Msa0330030 AT3G04070.2 50.292 171 72 3 9 166 8 178 3.12e-53 177
Msa0330030 AT4G10350.1 53.595 153 65 3 11 158 9 160 3.44e-53 177
Msa0330030 AT3G61910.1 49.704 169 68 4 8 159 8 176 2.24e-52 175
Msa0330030 AT4G27410.2 52.258 155 71 2 6 158 9 162 4.56e-52 173
Msa0330030 AT2G46770.1 49.405 168 68 3 8 158 13 180 5.29e-52 175
Msa0330030 AT1G33280.1 51.875 160 68 3 4 158 1 156 5.42e-52 173
Msa0330030 AT1G54330.1 56.098 164 64 4 6 165 1 160 1.82e-51 172
Msa0330030 AT5G66300.1 50.617 162 69 4 11 165 12 169 4.68e-51 170
Msa0330030 AT3G04070.1 45.989 187 72 3 9 166 8 194 9.91e-51 171
Msa0330030 AT3G17730.1 52.532 158 70 3 6 159 1 157 2.06e-50 167
Msa0330030 AT3G15500.1 49.697 165 73 4 6 165 9 168 9.53e-50 168
Msa0330030 AT1G79580.3 50.955 157 67 4 8 158 14 166 1.57e-49 169
Msa0330030 AT1G79580.5 50.955 157 67 4 8 158 14 166 1.57e-49 169
Msa0330030 AT1G79580.4 50.955 157 67 4 8 158 14 166 1.57e-49 169
Msa0330030 AT1G79580.2 50.955 157 67 4 8 158 14 166 1.57e-49 169
Msa0330030 AT1G79580.1 50.955 157 67 4 8 158 14 166 1.57e-49 169
Msa0330030 AT5G17260.1 50.955 157 73 2 6 158 1 157 2.30e-49 171
Msa0330030 AT1G52890.1 49.697 165 73 4 6 165 9 168 3.15e-49 166
Msa0330030 AT5G61430.2 50.000 190 75 6 58 232 2 186 3.45e-49 165
Msa0330030 AT3G03200.1 48.256 172 84 3 6 173 1 171 5.67e-49 170
Msa0330030 AT1G32770.1 38.934 244 127 8 8 229 13 256 7.97e-49 166
Msa0330030 AT1G65910.1 52.229 157 70 3 6 158 1 156 2.14e-48 171
Msa0330030 AT4G27410.3 47.093 172 71 3 6 158 9 179 1.30e-47 162
Msa0330030 AT4G35580.1 51.497 167 64 5 1 158 1 159 1.31e-47 167
Msa0330030 AT1G01720.1 38.760 258 125 8 10 243 6 254 1.37e-47 161
Msa0330030 AT4G35580.3 51.497 167 64 5 1 158 1 159 1.49e-47 167
Msa0330030 AT1G61110.1 45.405 185 78 6 2 169 7 185 1.51e-47 162
Msa0330030 AT4G35580.2 51.497 167 64 5 1 158 1 159 1.53e-47 167
Msa0330030 AT1G69490.1 47.799 159 72 3 8 158 6 161 1.27e-46 158
Msa0330030 AT5G08790.1 48.408 157 74 3 8 158 4 159 7.46e-46 157
Msa0330030 AT5G63790.1 48.101 158 75 3 7 158 46 202 2.64e-45 156
Msa0330030 AT5G63790.2 48.101 158 75 3 7 158 56 212 2.65e-45 156
Msa0330030 AT3G10490.1 50.602 166 75 4 7 168 23 185 3.47e-45 154
Msa0330030 AT1G77450.1 47.468 158 78 3 5 158 4 160 4.67e-45 154
Msa0330030 AT5G39820.1 44.149 188 81 6 2 165 11 198 5.92e-45 156
Msa0330030 AT3G10480.1 47.027 185 84 5 11 184 27 208 2.86e-44 157
Msa0330030 AT5G46590.1 47.561 164 80 4 6 164 1 163 8.18e-44 152
Msa0330030 AT3G10490.2 51.592 157 72 3 7 159 23 179 9.86e-44 155
Msa0330030 AT1G26870.1 41.584 202 77 5 7 190 12 190 2.14e-43 154
Msa0330030 AT5G13180.1 45.029 171 74 6 1 160 1 162 2.15e-43 149
Msa0330030 AT2G33480.1 49.020 153 72 4 10 160 14 162 3.66e-43 149
Msa0330030 AT2G43000.1 42.703 185 100 3 8 187 16 199 4.12e-43 149
Msa0330030 AT2G33480.2 49.673 153 69 4 10 160 14 160 4.25e-43 149
Msa0330030 AT3G10480.2 47.027 185 83 6 11 184 27 207 4.87e-43 153
Msa0330030 AT5G04410.1 50.327 153 71 4 11 159 9 160 6.92e-43 155
Msa0330030 AT3G15510.1 47.170 159 70 4 15 159 21 179 8.30e-43 151
Msa0330030 AT1G32510.1 47.368 171 79 3 6 165 1 171 9.09e-43 149
Msa0330030 AT3G10500.1 49.673 153 72 4 11 159 9 160 1.02e-42 154
Msa0330030 AT1G33060.1 47.799 159 64 4 11 158 24 174 1.70e-42 155
Msa0330030 AT1G33060.2 47.799 159 64 4 11 158 24 174 1.85e-42 155
Msa0330030 AT4G17980.1 44.149 188 91 5 6 179 1 188 2.55e-42 147
Msa0330030 AT4G17980.2 44.149 188 91 5 6 179 1 188 3.37e-42 147
Msa0330030 AT2G02450.1 48.993 149 70 4 13 158 53 198 1.32e-41 148
Msa0330030 AT2G02450.2 49.660 147 68 4 13 156 53 196 1.37e-41 149
Msa0330030 AT5G46590.2 50.746 134 61 3 6 134 1 134 2.48e-41 145
Msa0330030 AT1G52880.1 46.108 167 71 4 15 165 21 184 1.44e-40 144
Msa0330030 AT3G10480.3 41.284 218 81 6 11 184 27 241 1.83e-40 148
Msa0330030 AT5G24590.2 44.324 185 94 6 9 186 11 193 1.22e-39 144
Msa0330030 AT2G17040.1 45.695 151 71 3 13 158 8 152 1.46e-37 135
Msa0330030 AT3G12910.1 45.062 162 70 5 13 156 23 183 3.51e-37 134
Msa0330030 AT4G28530.2 42.197 173 42 4 7 161 6 138 5.21e-37 134
Msa0330030 AT5G09330.5 41.139 158 88 3 6 159 1 157 1.62e-36 137
Msa0330030 AT5G09330.2 41.139 158 88 3 6 159 1 157 1.62e-36 137
Msa0330030 AT5G09330.4 41.139 158 88 3 6 159 1 157 1.62e-36 137
Msa0330030 AT5G09330.3 41.139 158 88 3 6 159 1 157 1.62e-36 137
Msa0330030 AT5G09330.1 41.139 158 88 3 6 159 1 157 1.62e-36 137
Msa0330030 AT3G49530.2 43.312 157 83 5 11 162 13 168 1.91e-36 135
Msa0330030 AT2G27300.1 40.000 180 93 6 2 175 5 175 2.05e-36 133
Msa0330030 AT3G49530.1 43.312 157 83 5 11 162 13 168 5.53e-36 135
Msa0330030 AT1G34180.3 44.079 152 76 4 13 158 18 166 5.54e-36 134
Msa0330030 AT1G34180.1 43.791 153 77 4 13 159 18 167 2.06e-35 134
Msa0330030 AT4G10350.2 57.895 95 39 1 64 158 20 113 9.17e-35 128
Msa0330030 AT1G34190.1 48.031 127 62 2 13 135 18 144 1.45e-34 132
Msa0330030 AT5G64060.1 40.506 158 89 3 6 159 1 157 2.17e-34 128
Msa0330030 AT1G34180.4 41.463 164 75 5 13 158 18 178 4.72e-34 129
Msa0330030 AT1G34180.2 41.212 165 76 5 13 159 18 179 1.36e-33 129
Msa0330030 AT5G22290.1 39.375 160 86 4 5 161 15 166 3.29e-33 125
Msa0330030 AT3G44290.2 41.096 146 75 3 13 155 16 153 2.50e-32 120
Msa0330030 AT3G44290.1 41.096 146 75 3 13 155 16 153 1.65e-31 120
Msa0330030 AT1G32870.2 41.143 175 94 4 3 173 2 171 6.20e-31 122
Msa0330030 AT1G32870.1 41.143 175 94 4 3 173 2 171 7.16e-31 121
Msa0330030 AT1G32870.3 41.143 175 94 4 3 173 38 207 1.12e-30 121
Msa0330030 AT5G04395.1 41.216 148 69 3 5 134 22 169 2.10e-29 111
Msa0330030 AT2G33480.3 50.515 97 47 1 64 160 10 105 5.66e-28 108
Msa0330030 AT1G02230.1 31.064 235 143 6 12 237 4 228 2.62e-27 109
Msa0330030 AT3G04420.2 32.474 194 115 5 12 197 4 189 8.72e-25 101
Msa0330030 AT5G22380.1 37.908 153 85 6 14 156 8 160 9.50e-25 100
Msa0330030 AT2G18060.2 43.750 112 55 3 87 193 2 110 2.48e-24 100
Msa0330030 AT3G04420.1 30.000 240 137 8 12 233 4 230 2.50e-24 101
Msa0330030 AT3G44350.2 34.177 158 96 4 10 159 4 161 3.18e-24 99.0
Msa0330030 AT4G01520.1 34.659 176 93 8 10 171 3 170 2.86e-23 97.8
Msa0330030 AT4G01550.1 36.306 157 84 7 14 161 7 156 5.58e-23 99.0
Msa0330030 AT5G64530.2 38.462 130 60 5 11 134 3 118 1.41e-22 92.4
Msa0330030 AT5G64530.1 33.526 173 72 7 11 159 3 156 2.11e-22 92.8
Msa0330030 AT3G10490.4 56.410 78 34 0 82 159 2 79 3.21e-22 95.5
Msa0330030 AT3G10490.3 56.410 78 34 0 82 159 2 79 3.21e-22 95.5
Msa0330030 AT3G44350.1 37.879 132 74 4 10 133 4 135 3.62e-22 91.3
Msa0330030 AT4G01540.4 33.526 173 91 8 14 171 7 170 5.09e-22 95.5
Msa0330030 AT4G01540.2 33.526 173 91 8 14 171 7 170 8.34e-22 95.1
Msa0330030 AT4G01540.3 33.526 173 91 8 14 171 7 170 8.38e-22 95.1
Msa0330030 AT4G01540.1 33.526 173 91 8 14 171 7 170 1.04e-21 95.5
Msa0330030 AT2G43000.2 39.167 120 70 1 71 187 2 121 2.75e-21 89.7
Msa0330030 AT1G02250.1 31.925 213 119 10 12 210 4 204 9.17e-20 89.0
Msa0330030 AT1G02220.1 36.719 128 70 4 12 132 4 127 1.16e-19 89.0
Msa0330030 AT5G50820.1 36.923 130 70 4 10 134 16 138 2.56e-18 81.6
Msa0330030 AT1G01010.1 31.447 159 87 6 14 158 6 156 1.75e-16 79.7
Msa0330030 AT5G14000.2 33.588 131 81 3 10 136 14 142 2.37e-15 72.8
Msa0330030 AT5G22290.2 44.595 74 33 2 88 161 2 67 2.24e-14 71.6
Msa0330030 AT5G14000.1 31.788 151 93 5 10 156 14 158 2.42e-14 70.9
Msa0330030 AT3G56530.1 26.582 158 106 4 5 156 46 199 4.06e-14 72.0
Msa0330030 AT3G55210.1 27.168 173 103 5 1 156 1 167 8.16e-14 70.9
Msa0330030 AT3G04430.1 30.201 149 89 4 17 150 6 154 5.56e-13 67.0

Find 107 sgRNAs with CRISPR-Local

Find 336 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCATCACTTCCAGCATTAA+TGG 0.146600 2_4:+44136122 Msa0330030:CDS
TTTCCCTAAGTTAAAGAAAT+TGG 0.197910 2_4:+44136554 Msa0330030:three_prime_UTR
ATTAATGATCAAAACCTAAA+AGG 0.212913 2_4:+44136408 Msa0330030:CDS
GAAAGATGGGGCTTTGTAAT+TGG 0.225285 2_4:+44136848 Msa0330030:three_prime_UTR
TCCTAAAATTTCATCTTCTA+AGG 0.243571 2_4:+44135044 Msa0330030:CDS
GTTCCATATTGGTTGTTATA+TGG 0.295352 2_4:-44136248 None:intergenic
GTGCAACTGCATCAGGTTAT+TGG 0.304123 2_4:+44134872 Msa0330030:CDS
TTGTTGGCTAGAGGTAATTT+TGG 0.309334 2_4:-44136270 None:intergenic
CAACCATATAACAACCAATA+TGG 0.320797 2_4:+44136245 Msa0330030:CDS
GTAGCCCTGTTGCATATTTA+CGG 0.328714 2_4:-44134840 None:intergenic
ACTTGCATTGTTGTTATTGT+TGG 0.333988 2_4:-44136286 None:intergenic
AATCATCTACCGTTGTAATA+TGG 0.342585 2_4:+44136644 Msa0330030:three_prime_UTR
AACAACAATGCAAGTACATT+TGG 0.349859 2_4:+44136294 Msa0330030:CDS
TGATCCAATTTCTTTAACTT+AGG 0.363392 2_4:-44136558 None:intergenic
CACAACAAGAAAATTTAAAT+AGG 0.369872 2_4:-44136529 None:intergenic
CTTCGCAAGGGCACTCTTGT+TGG 0.373702 2_4:+44134922 Msa0330030:CDS
GATAAAGGGTCTAAGCTATA+AGG 0.378533 2_4:-44136324 None:intergenic
GATCCAATTTCTTTAACTTA+GGG 0.379400 2_4:-44136557 None:intergenic
GGTTGTAGATTGGGTTGGTT+TGG 0.395494 2_4:-44136227 None:intergenic
GCTGCGACGGTAGAGGATTC+AGG 0.398422 2_4:+44136600 Msa0330030:three_prime_UTR
TTGTTATATGGTTGTAGATT+GGG 0.402170 2_4:-44136236 None:intergenic
GTTGTTATATGGTTGTAGAT+TGG 0.403136 2_4:-44136237 None:intergenic
AGAGACCGTAAATATGCAAC+AGG 0.409929 2_4:+44134835 Msa0330030:CDS
TTGTGTATATACAGGAAGAT+TGG 0.410383 2_4:+44136016 Msa0330030:intron
TTGTTAAAATAGATCATTGT+GGG 0.422066 2_4:+44136928 Msa0330030:three_prime_UTR
TGTGTATATACAGGAAGATT+GGG 0.427064 2_4:+44136017 Msa0330030:intron
TGTGAGCCATGGGATATTCC+TGG 0.431452 2_4:+44131597 Msa0330030:CDS
TTTGAGTCAACTATCAAAGA+TGG 0.431620 2_4:+44136374 Msa0330030:CDS
GCCCCATCTTTCTAATATAC+CGG 0.433813 2_4:-44136837 None:intergenic
TTGAGAAAACATGGAGAAGC+AGG 0.435570 2_4:-44136202 None:intergenic
TTAATGATCAAAACCTAAAA+GGG 0.436538 2_4:+44136409 Msa0330030:CDS
CCCATGGCTCACACTTGTTA+AGG 0.440925 2_4:-44131587 None:intergenic
ACAAATCGTGCAACTGCATC+AGG 0.442887 2_4:+44134865 Msa0330030:CDS
CTTGCTCATATTCATCTGTA+TGG 0.443475 2_4:-44136176 None:intergenic
ATGCATGAGTTTCGTATTGA+GGG 0.459420 2_4:+44135009 Msa0330030:CDS
TCAGGTTATTGGAAGGCAAC+AGG 0.459668 2_4:+44134883 Msa0330030:CDS
ATCAAGGAAGGGCACCTAAA+GGG 0.466310 2_4:+44134968 Msa0330030:CDS
GTCCCGGTATATTAGAAAGA+TGG 0.472841 2_4:+44136834 Msa0330030:three_prime_UTR
AGGATCCAATTTCGATGAAA+AGG 0.474863 2_4:+44136681 Msa0330030:three_prime_UTR
AAGACTTTAGTGTTCTATCA+AGG 0.477018 2_4:+44134952 Msa0330030:CDS
TCCCGGTATATTAGAAAGAT+GGG 0.477592 2_4:+44136835 Msa0330030:three_prime_UTR
TATGCATGAGTTTCGTATTG+AGG 0.481434 2_4:+44135008 Msa0330030:CDS
GTCAACATCAATCATGAGAA+AGG 0.483380 2_4:-44131565 None:intergenic
GGAATTAATTATAGAGAAGG+TGG 0.494514 2_4:-44131359 None:intergenic
TGCTACAAAACCTCCAAGCA+TGG 0.497760 2_4:+44136074 Msa0330030:CDS
TGAGAGTTACTTATCTGAAG+TGG 0.505837 2_4:+44136461 Msa0330030:CDS
CATCTGTATGGAATTGAGCT+TGG 0.508894 2_4:-44136164 None:intergenic
ATGTGGTGCTGCGACGGTAG+AGG 0.522239 2_4:+44136593 Msa0330030:three_prime_UTR
AAAGGGTCATCACCAAGCTT+AGG 0.523339 2_4:+44136426 Msa0330030:CDS
TTTCGTATTGAGGGTCCTCA+TGG 0.526305 2_4:+44135018 Msa0330030:CDS
CTTTAGTGTTCTATCAAGGA+AGG 0.528388 2_4:+44134956 Msa0330030:CDS
AACAATGCAAGTACATTTGG+AGG 0.528454 2_4:+44136297 Msa0330030:CDS
GATGGAATTAATTATAGAGA+AGG 0.531426 2_4:-44131362 None:intergenic
ATGTAAGAATCCATTAATGC+TGG 0.533005 2_4:-44136132 None:intergenic
TCATAGCAACTACCCATGCT+TGG 0.533828 2_4:-44136087 None:intergenic
TATCAAGGAAGGGCACCTAA+AGG 0.534747 2_4:+44134967 Msa0330030:CDS
GAACTTCCTTCACCTAAGCT+TGG 0.537127 2_4:-44136438 None:intergenic
CCTTAACAAGTGTGAGCCAT+GGG 0.539747 2_4:+44131587 Msa0330030:CDS
CACACAAGCTCTTCATCTCT+AGG 0.541777 2_4:-44131507 None:intergenic
GATTCAGGTCCGGATTGAAA+AGG 0.545804 2_4:+44136615 Msa0330030:three_prime_UTR
TAGCAACTACCCATGCTTGG+AGG 0.547765 2_4:-44136084 None:intergenic
GAGAGTTACTTATCTGAAGT+GGG 0.548125 2_4:+44136462 Msa0330030:CDS
TATATGGTTGTAGATTGGGT+TGG 0.552281 2_4:-44136232 None:intergenic
GAGTAACATAAGCATGGTTG+AGG 0.554745 2_4:+44131455 Msa0330030:CDS
CCCCATCTTTCTAATATACC+GGG 0.556445 2_4:-44136836 None:intergenic
GACGGTAGAGGATTCAGGTC+CGG 0.561922 2_4:+44136605 Msa0330030:three_prime_UTR
CCAATTTAAAAGTGAAACAA+TGG 0.564555 2_4:+44136951 Msa0330030:three_prime_UTR
TTAGAAATTGTTCCACATGT+GGG 0.570954 2_4:-44136490 None:intergenic
TAGAAATTGTTCCACATGTG+GGG 0.571008 2_4:-44136489 None:intergenic
ATTAGAAATTGTTCCACATG+TGG 0.572291 2_4:-44136491 None:intergenic
CAAGAAAATTTAAATAGGAG+TGG 0.577377 2_4:-44136524 None:intergenic
TATAACATGATTTAAAACAA+TGG 0.578918 2_4:-44136749 None:intergenic
TCTATCCACATGATATGTCC+CGG 0.579561 2_4:+44136818 Msa0330030:three_prime_UTR
GGACAGAGCTATCCTTCGCA+AGG 0.581846 2_4:+44134909 Msa0330030:CDS
TCTAAAATGTGGTGCTGCGA+CGG 0.591737 2_4:+44136587 Msa0330030:three_prime_UTR
ACCTTAACAAGTGTGAGCCA+TGG 0.592225 2_4:+44131586 Msa0330030:CDS
ATGTGGAACAATTTCTAATG+TGG 0.595031 2_4:+44136495 Msa0330030:exon
CAACAAGAGTGCCCTTGCGA+AGG 0.596166 2_4:-44134921 None:intergenic
ATTAATTATAGAGAAGGTGG+AGG 0.598614 2_4:-44131356 None:intergenic
GCTACAAAACCTCCAAGCAT+GGG 0.600781 2_4:+44136075 Msa0330030:CDS
GTTGAGGCAAAGCTACCACC+AGG 0.601916 2_4:+44131471 Msa0330030:CDS
GTGTGATTACTTGATGAAGA+AGG 0.603211 2_4:+44131527 Msa0330030:CDS
CATGTGTGGGAGGGAAAGAG+TGG 0.608228 2_4:+44134797 Msa0330030:CDS
CAGAAGCAGCATGTGTGGGA+GGG 0.608897 2_4:+44134788 Msa0330030:intron
TTTAGTGTTCTATCAAGGAA+GGG 0.615096 2_4:+44134957 Msa0330030:CDS
TTATTGGAAGGCAACAGGAA+AGG 0.621123 2_4:+44134888 Msa0330030:CDS
TACTAACCAGGAATATCCCA+TGG 0.624451 2_4:-44131603 None:intergenic
ATATGGTGCTGAAGCTGTAG+AGG 0.625759 2_4:+44136661 Msa0330030:three_prime_UTR
TCATCACCAAGCTTAGGTGA+AGG 0.632923 2_4:+44136432 Msa0330030:CDS
AACTGCATCAGGTTATTGGA+AGG 0.632925 2_4:+44134876 Msa0330030:CDS
GACAGAGCTATCCTTCGCAA+GGG 0.638575 2_4:+44134910 Msa0330030:CDS
TTTGTTAAAATAGATCATTG+TGG 0.638660 2_4:+44136927 Msa0330030:three_prime_UTR
TTGTTGTTATTGTTGGCTAG+AGG 0.638919 2_4:-44136279 None:intergenic
TGAGAAAACATGGAGAAGCA+GGG 0.639023 2_4:-44136201 None:intergenic
TGGTGCAGAAGCAGCATGTG+TGG 0.642823 2_4:+44134783 Msa0330030:intron
GCAGAAGCAGCATGTGTGGG+AGG 0.644425 2_4:+44134787 Msa0330030:intron
CTAGGATGAAATCTGAACCC+TGG 0.649291 2_4:-44131489 None:intergenic
ATATACCGGGACATATCATG+TGG 0.657333 2_4:-44136823 None:intergenic
GGTAGTTGCTATGATGACAC+AGG 0.669164 2_4:+44136096 Msa0330030:CDS
AAGTGGGTATGCCCCACATG+TGG 0.670092 2_4:+44136478 Msa0330030:CDS
CCCGGTATATTAGAAAGATG+GGG 0.684881 2_4:+44136836 Msa0330030:three_prime_UTR
GATCATCTGCATCTAAAATG+TGG 0.685018 2_4:+44136576 Msa0330030:three_prime_UTR
GGTGCAGAAGCAGCATGTGT+GGG 0.686440 2_4:+44134784 Msa0330030:intron
GGATGAAATCTGAACCCTGG+TGG 0.692300 2_4:-44131486 None:intergenic
GCTTCAGCACCATATTACAA+CGG 0.738936 2_4:-44136653 None:intergenic
GAGACCGTAAATATGCAACA+GGG 0.752701 2_4:+44134836 Msa0330030:CDS
TTGAGGCAAAGCTACCACCA+GGG 0.776299 2_4:+44131472 Msa0330030:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTTATAAATAAATAA+TGG - chr2_4:44132706-44132725 None:intergenic 0.0%
!!! TTCTTTATTAAATTTTGATA+AGG + chr2_4:44131902-44131921 Msa0330030:intron 10.0%
!!! TCTTTATTAAATTTTGATAA+GGG + chr2_4:44131903-44131922 Msa0330030:intron 10.0%
!! GATAAAAAAAATTATATCAT+CGG - chr2_4:44133338-44133357 None:intergenic 10.0%
!! GTAAAAAAATATATATCAAA+TGG - chr2_4:44134561-44134580 None:intergenic 10.0%
!!! AACAAATAGTTTTTTTTAAA+GGG - chr2_4:44134644-44134663 None:intergenic 10.0%
!!! TAACAAATAGTTTTTTTTAA+AGG - chr2_4:44134645-44134664 None:intergenic 10.0%
!! TATAGTTATTAAAATAAACT+AGG + chr2_4:44134720-44134739 Msa0330030:intron 10.0%
!! ATAGTTATTAAAATAAACTA+GGG + chr2_4:44134721-44134740 Msa0330030:intron 10.0%
!!! TTTTTTTTCTAACAAAGATA+TGG - chr2_4:44131434-44131453 None:intergenic 15.0%
!!! AAATTTTCTCATAAAGAAAT+AGG + chr2_4:44131731-44131750 Msa0330030:intron 15.0%
!!! GTTAATTTAATTTCCAATTA+AGG + chr2_4:44132058-44132077 Msa0330030:intron 15.0%
!! AAGACAGAAAAAAATAAATT+TGG + chr2_4:44132320-44132339 Msa0330030:intron 15.0%
!! TACATACATAAATATGTAAA+TGG + chr2_4:44133411-44133430 Msa0330030:intron 15.0%
!! AAGATATAAAATAATACAAG+TGG - chr2_4:44133510-44133529 None:intergenic 15.0%
!!! TGTATTATTTTATATCTTCA+AGG + chr2_4:44133512-44133531 Msa0330030:intron 15.0%
!! TTTGTCAATTTAAATAGTTA+TGG + chr2_4:44133604-44133623 Msa0330030:intron 15.0%
!!! GAATTTTTTTATATCAACAA+GGG + chr2_4:44133626-44133645 Msa0330030:intron 15.0%
!! ATAATTAAAATACAAACACA+TGG - chr2_4:44133710-44133729 None:intergenic 15.0%
!!! TATTTTAATAAAAAAGTGTG+TGG + chr2_4:44134391-44134410 Msa0330030:intron 15.0%
!!! ATTTTAATAAAAAAGTGTGT+GGG + chr2_4:44134392-44134411 Msa0330030:intron 15.0%
!!! ATTAATGTAATGGAAATATA+TGG + chr2_4:44134763-44134782 Msa0330030:intron 15.0%
!! TATAATTAGTGTAAAGAAAA+TGG - chr2_4:44135258-44135277 None:intergenic 15.0%
!! TTTCTTTACACTAATTATAT+TGG + chr2_4:44135259-44135278 Msa0330030:intron 15.0%
!! AGATTGACAAATAAAAATTA+AGG + chr2_4:44135371-44135390 Msa0330030:intron 15.0%
!! ACCATATATGTTAAATTAAA+TGG + chr2_4:44135781-44135800 Msa0330030:intron 15.0%
!!! ACCATTTAATTTAACATATA+TGG - chr2_4:44135785-44135804 None:intergenic 15.0%
!!! TATAACATGATTTAAAACAA+TGG - chr2_4:44136752-44136771 None:intergenic 15.0%
!!! AAGTGAGAAATTTTTTAAGA+TGG - chr2_4:44131383-44131402 None:intergenic 20.0%
!!! ATTTAATTTCCAATTAAGGT+AGG + chr2_4:44132062-44132081 Msa0330030:intron 20.0%
!! ATACTTAGGATAAAATACAT+TGG + chr2_4:44132647-44132666 Msa0330030:intron 20.0%
!! ACTATCAAAGTCTTTATAAT+AGG - chr2_4:44132931-44132950 None:intergenic 20.0%
!! CTTTCTAAACACAAATATAA+TGG - chr2_4:44133222-44133241 None:intergenic 20.0%
!!! TTTAATTTGTATGCACAAAT+AGG - chr2_4:44133474-44133493 None:intergenic 20.0%
!!! GGAATTTTTTTATATCAACA+AGG + chr2_4:44133625-44133644 Msa0330030:intron 20.0%
!! ATAAAATCCAAAACTAGTTA+TGG - chr2_4:44133769-44133788 None:intergenic 20.0%
!! AAATGAAAAAGAAACTGTTA+GGG + chr2_4:44133806-44133825 Msa0330030:intron 20.0%
!!! AACAGTAATAATTTTGTTTG+TGG - chr2_4:44133958-44133977 None:intergenic 20.0%
!! TGTTCTAATAATTAAGACAA+AGG + chr2_4:44133974-44133993 Msa0330030:intron 20.0%
!! AGTTATTATAGATCAATGAA+AGG - chr2_4:44134121-44134140 None:intergenic 20.0%
!! TTATAATAACAGTACCTAAT+AGG + chr2_4:44134276-44134295 Msa0330030:intron 20.0%
!! TTCTAACAAAAAGTCTAAAT+GGG + chr2_4:44134323-44134342 Msa0330030:intron 20.0%
!! TTTAAATGATTAAGAGTTAG+TGG - chr2_4:44134354-44134373 None:intergenic 20.0%
!! TTATTAAAATAATGTGCTAG+TGG - chr2_4:44134382-44134401 None:intergenic 20.0%
!!! TTTTAATAAAAAAGTGTGTG+GGG + chr2_4:44134393-44134412 Msa0330030:intron 20.0%
!! ATATATATCAAATGGAACAT+GGG - chr2_4:44134553-44134572 None:intergenic 20.0%
!! AATATATATCAAATGGAACA+TGG - chr2_4:44134554-44134573 None:intergenic 20.0%
!! TCTTAGTCTAATTAATGTAA+TGG + chr2_4:44134753-44134772 Msa0330030:intron 20.0%
!!! TATTTCTTTCTCCTTTAAAA+AGG - chr2_4:44135152-44135171 None:intergenic 20.0%
!!! TCATTTTGCAACATATTTTT+TGG + chr2_4:44135301-44135320 Msa0330030:intron 20.0%
!! ATGTGACTTCAAAAATATAT+TGG + chr2_4:44135465-44135484 Msa0330030:intron 20.0%
!! TGTGACTTCAAAAATATATT+GGG + chr2_4:44135466-44135485 Msa0330030:intron 20.0%
!! GTTTAATAAAAAATTCAGAG+AGG - chr2_4:44135510-44135529 None:intergenic 20.0%
!! TTATCCAATCAAATATCAAA+AGG - chr2_4:44135595-44135614 None:intergenic 20.0%
!! TTCGTTAATTGTTAACTATT+CGG - chr2_4:44135882-44135901 None:intergenic 20.0%
!!! TTAGGTTTTGATCATTAATA+GGG - chr2_4:44136407-44136426 None:intergenic 20.0%
!!! TTTAGGTTTTGATCATTAAT+AGG - chr2_4:44136408-44136427 None:intergenic 20.0%
!! ATTAATGATCAAAACCTAAA+AGG + chr2_4:44136408-44136427 Msa0330030:CDS 20.0%
!! TTAATGATCAAAACCTAAAA+GGG + chr2_4:44136409-44136428 Msa0330030:CDS 20.0%
!! CACAACAAGAAAATTTAAAT+AGG - chr2_4:44136532-44136551 None:intergenic 20.0%
!!! CTATTTAAATTTTCTTGTTG+TGG + chr2_4:44136530-44136549 Msa0330030:three_prime_UTR 20.0%
!!! GTATCTATATATTTTTGTCA+TGG + chr2_4:44136772-44136791 Msa0330030:three_prime_UTR 20.0%
!!! AATTTGTAGTTCATTTTAGT+TGG + chr2_4:44136879-44136898 Msa0330030:three_prime_UTR 20.0%
!! TTTGTTAAAATAGATCATTG+TGG + chr2_4:44136927-44136946 Msa0330030:three_prime_UTR 20.0%
!! TTGTTAAAATAGATCATTGT+GGG + chr2_4:44136928-44136947 Msa0330030:three_prime_UTR 20.0%
! GATGGAATTAATTATAGAGA+AGG - chr2_4:44131365-44131384 None:intergenic 25.0%
! AAAAATGAGTAACATAAGCA+TGG + chr2_4:44131449-44131468 Msa0330030:exon 25.0%
! AACATGTCATGTGTATATAA+AGG - chr2_4:44131675-44131694 None:intergenic 25.0%
! ATAGCAAACTGAAAAATTGA+TGG - chr2_4:44131801-44131820 None:intergenic 25.0%
! ACTCATTTGTACTTTATCAA+TGG - chr2_4:44131826-44131845 None:intergenic 25.0%
! AGTATATATCAGTTTCCATT+AGG - chr2_4:44132232-44132251 None:intergenic 25.0%
! GACAAAAATCATCTCAAATT+TGG - chr2_4:44132349-44132368 None:intergenic 25.0%
!!! TCGATCTAATTTTTTCACAA+AGG - chr2_4:44132437-44132456 None:intergenic 25.0%
!!! AGCCTTTGTATTTTAATGTA+TGG + chr2_4:44132509-44132528 Msa0330030:intron 25.0%
! TGCCATACATTAAAATACAA+AGG - chr2_4:44132514-44132533 None:intergenic 25.0%
!!! TTGTATTTTAATGTATGGCA+TGG + chr2_4:44132514-44132533 Msa0330030:intron 25.0%
! TATTATTAATTCCTAATCCC+AGG + chr2_4:44132538-44132557 Msa0330030:intron 25.0%
! TATCTCTATTAAATATGCCT+GGG - chr2_4:44132558-44132577 None:intergenic 25.0%
! CATATTTAATAGAGATAGGT+AGG + chr2_4:44132561-44132580 Msa0330030:intron 25.0%
! TGCATACAAATTAAATCCAA+TGG + chr2_4:44133479-44133498 Msa0330030:intron 25.0%
!!! AAGAGTGAAATTTTTTTTGC+TGG - chr2_4:44133538-44133557 None:intergenic 25.0%
!!! TTTTTTAGGCTTGATATGAT+AGG + chr2_4:44133657-44133676 Msa0330030:intron 25.0%
!! TACTGAAGCTTTTATAAAGT+AGG + chr2_4:44133684-44133703 Msa0330030:intron 25.0%
!!! GTTTCTTTTTCATTTCATGA+TGG - chr2_4:44133801-44133820 None:intergenic 25.0%
! GAAATGAAAAAGAAACTGTT+AGG + chr2_4:44133805-44133824 Msa0330030:intron 25.0%
! AATGAAAAAGAAACTGTTAG+GGG + chr2_4:44133807-44133826 Msa0330030:intron 25.0%
! TCAGGATAATATTGTTAATG+AGG + chr2_4:44134038-44134057 Msa0330030:intron 25.0%
! ATATTGTTAATGAGGACAAT+TGG + chr2_4:44134046-44134065 Msa0330030:intron 25.0%
! ATGTGAATTTAAGTAAGATG+AGG - chr2_4:44134153-44134172 None:intergenic 25.0%
!! TTTTGTTAGAAGATCTCTAT+TGG - chr2_4:44134314-44134333 None:intergenic 25.0%
! CTTCTAACAAAAAGTCTAAA+TGG + chr2_4:44134322-44134341 Msa0330030:intron 25.0%
!!! TAGAAGATGAAATTTTAGGA+GGG - chr2_4:44135044-44135063 None:intergenic 25.0%
!! TTAGAAGATGAAATTTTAGG+AGG - chr2_4:44135045-44135064 None:intergenic 25.0%
! TCCTAAAATTTCATCTTCTA+AGG + chr2_4:44135044-44135063 Msa0330030:CDS 25.0%
!! ACCTTAGAAGATGAAATTTT+AGG - chr2_4:44135048-44135067 None:intergenic 25.0%
!! TTTTGGACAAAAATGACTAT+AGG + chr2_4:44135220-44135239 Msa0330030:intron 25.0%
! TTTGGACAAAAATGACTATA+GGG + chr2_4:44135221-44135240 Msa0330030:intron 25.0%
!!! ATTAAGGACTTTTGACTTTT+TGG + chr2_4:44135387-44135406 Msa0330030:intron 25.0%
!!! CTGTTATTTGTTTTGTAGAT+AGG - chr2_4:44135565-44135584 None:intergenic 25.0%
!! AAGACCTTTTGATATTTGAT+TGG + chr2_4:44135588-44135607 Msa0330030:intron 25.0%
! TGATATTTGATTGGATAACT+CGG + chr2_4:44135597-44135616 Msa0330030:intron 25.0%
! GTTATTCAATCAAAATCGAT+CGG + chr2_4:44135676-44135695 Msa0330030:intron 25.0%
! GTTAAATTGGTTGGAAAATT+CGG - chr2_4:44135814-44135833 None:intergenic 25.0%
! GTTTGAACTTAGAGTTAAAT+TGG - chr2_4:44135827-44135846 None:intergenic 25.0%
! TTAATTGTTAACTATTCGGA+GGG - chr2_4:44135878-44135897 None:intergenic 25.0%
! TTGTTATATGGTTGTAGATT+GGG - chr2_4:44136239-44136258 None:intergenic 25.0%
! CAAGAAAATTTAAATAGGAG+TGG - chr2_4:44136527-44136546 None:intergenic 25.0%
! TTTCCCTAAGTTAAAGAAAT+TGG + chr2_4:44136554-44136573 Msa0330030:three_prime_UTR 25.0%
!! GATCCAATTTCTTTAACTTA+GGG - chr2_4:44136560-44136579 None:intergenic 25.0%
!! TGATCCAATTTCTTTAACTT+AGG - chr2_4:44136561-44136580 None:intergenic 25.0%
!!! CCATTGTTTCACTTTTAAAT+TGG - chr2_4:44136954-44136973 None:intergenic 25.0%
! CCAATTTAAAAGTGAAACAA+TGG + chr2_4:44136951-44136970 Msa0330030:three_prime_UTR 25.0%
GGAATTAATTATAGAGAAGG+TGG - chr2_4:44131362-44131381 None:intergenic 30.0%
! AAGGAATGCATGATAATGAA+GGG - chr2_4:44131656-44131675 None:intergenic 30.0%
! AAAGGAATGCATGATAATGA+AGG - chr2_4:44131657-44131676 None:intergenic 30.0%
!! ATTTTGATAAGGGTAGATTG+AGG + chr2_4:44131913-44131932 Msa0330030:intron 30.0%
AGATTATAGCCTACCTTAAT+TGG - chr2_4:44132074-44132093 None:intergenic 30.0%
GTTCAAGGATCAAAAGATTA+TGG - chr2_4:44132154-44132173 None:intergenic 30.0%
! ATCTTTTGATCCTTGAACAA+TGG + chr2_4:44132156-44132175 Msa0330030:intron 30.0%
TGATAAATGAAAGAGCCTAA+TGG + chr2_4:44132214-44132233 Msa0330030:intron 30.0%
TAGCTACGAAAATTTAGAGA+CGG - chr2_4:44132377-44132396 None:intergenic 30.0%
!!! TCCAATCTGCATTTTTTATG+TGG + chr2_4:44132470-44132489 Msa0330030:intron 30.0%
!!! CCAATCTGCATTTTTTATGT+GGG + chr2_4:44132471-44132490 Msa0330030:intron 30.0%
TATTAAATATGCCTGGGATT+AGG - chr2_4:44132552-44132571 None:intergenic 30.0%
CTATCTCTATTAAATATGCC+TGG - chr2_4:44132559-44132578 None:intergenic 30.0%
CAGGCATATTTAATAGAGAT+AGG + chr2_4:44132557-44132576 Msa0330030:intron 30.0%
AGTTAATCACGTTTATGTGT+AGG - chr2_4:44132999-44133018 None:intergenic 30.0%
!!! TTTCGAGTTTTACATATTGC+TGG + chr2_4:44133047-44133066 Msa0330030:intron 30.0%
! CTTTTGACATGAAAGTAAGA+TGG - chr2_4:44133091-44133110 None:intergenic 30.0%
!! AATACAAGTGGATTAACCAT+TGG - chr2_4:44133498-44133517 None:intergenic 30.0%
!!! CAAGGGCAAAATAGTTTTTT+AGG + chr2_4:44133643-44133662 Msa0330030:intron 30.0%
TGTTGAGATGTCTTCTAATT+AGG - chr2_4:44133836-44133855 None:intergenic 30.0%
ATGGAAGAGGATATGTATAT+TGG + chr2_4:44133860-44133879 Msa0330030:intron 30.0%
TGGAAGAGGATATGTATATT+GGG + chr2_4:44133861-44133880 Msa0330030:intron 30.0%
!! ATTTTGTTTGTGGCAAAACA+GGG - chr2_4:44133948-44133967 None:intergenic 30.0%
!! AATTTTGTTTGTGGCAAAAC+AGG - chr2_4:44133949-44133968 None:intergenic 30.0%
GTCATGAGCATTTAATCAAA+AGG + chr2_4:44134004-44134023 Msa0330030:intron 30.0%
CAAAAGGATTAAGTAAACTC+AGG + chr2_4:44134020-44134039 Msa0330030:intron 30.0%
ACTTAAGACCTTCAATTTGA+GGG - chr2_4:44134222-44134241 None:intergenic 30.0%
TCAAATTGAAGGTCTTAAGT+GGG + chr2_4:44134222-44134241 Msa0330030:intron 30.0%
AAAAAGTGATGTGTACAAGT+GGG - chr2_4:44134249-44134268 None:intergenic 30.0%
AAAAAAGTGATGTGTACAAG+TGG - chr2_4:44134250-44134269 None:intergenic 30.0%
AATGATTAAGAGTTAGTGGT+GGG - chr2_4:44134350-44134369 None:intergenic 30.0%
AAATGATTAAGAGTTAGTGG+TGG - chr2_4:44134351-44134370 None:intergenic 30.0%
TTAAAATAATGTGCTAGTGG+TGG - chr2_4:44134379-44134398 None:intergenic 30.0%
!!! ATTGTGGGAAAATTTTTTGG+AGG - chr2_4:44134466-44134485 None:intergenic 30.0%
! TCCAAAAAATTTTCCCACAA+TGG + chr2_4:44134465-44134484 Msa0330030:intron 30.0%
! CCAAAAAATTTTCCCACAAT+GGG + chr2_4:44134466-44134485 Msa0330030:intron 30.0%
! TTTAAGACCTAGTACCTAAT+AGG - chr2_4:44134496-44134515 None:intergenic 30.0%
ATTAGGTACTAGGTCTTAAA+TGG + chr2_4:44134496-44134515 Msa0330030:intron 30.0%
AAGACTTTAGTGTTCTATCA+AGG + chr2_4:44134952-44134971 Msa0330030:CDS 30.0%
TTTAGTGTTCTATCAAGGAA+GGG + chr2_4:44134957-44134976 Msa0330030:CDS 30.0%
TAAAGGGAGAAAAACTGAAT+GGG + chr2_4:44134984-44135003 Msa0330030:CDS 30.0%
! GCTTGATCTAACCTTTTTAA+AGG + chr2_4:44135138-44135157 Msa0330030:intron 30.0%
AAAGGAGAAAGAAATAAGTC+AGG + chr2_4:44135156-44135175 Msa0330030:intron 30.0%
! ATGTGAGACAAATTTGGTTT+CGG - chr2_4:44135431-44135450 None:intergenic 30.0%
! GTTTTGTAGATAGGAGAATT+TGG - chr2_4:44135556-44135575 None:intergenic 30.0%
GAACTTAGAGTTAAATTGGT+TGG - chr2_4:44135823-44135842 None:intergenic 30.0%
GTTAATTGTTAACTATTCGG+AGG - chr2_4:44135879-44135898 None:intergenic 30.0%
CAAAACAAGTGTCATAGTTT+AGG - chr2_4:44135964-44135983 None:intergenic 30.0%
GCATAATCTTGTGTATATAC+AGG + chr2_4:44136008-44136027 Msa0330030:intron 30.0%
TTGTGTATATACAGGAAGAT+TGG + chr2_4:44136016-44136035 Msa0330030:intron 30.0%
TGTGTATATACAGGAAGATT+GGG + chr2_4:44136017-44136036 Msa0330030:intron 30.0%
ATGTAAGAATCCATTAATGC+TGG - chr2_4:44136135-44136154 None:intergenic 30.0%
GTTGTTATATGGTTGTAGAT+TGG - chr2_4:44136240-44136259 None:intergenic 30.0%
CAACCATATAACAACCAATA+TGG + chr2_4:44136245-44136264 Msa0330030:CDS 30.0%
! GTTCCATATTGGTTGTTATA+TGG - chr2_4:44136251-44136270 None:intergenic 30.0%
!!! AGGTAATTTTGGTTCCATAT+TGG - chr2_4:44136262-44136281 None:intergenic 30.0%
! ACTTGCATTGTTGTTATTGT+TGG - chr2_4:44136289-44136308 None:intergenic 30.0%
AACAACAATGCAAGTACATT+TGG + chr2_4:44136294-44136313 Msa0330030:CDS 30.0%
TTTGAGTCAACTATCAAAGA+TGG + chr2_4:44136374-44136393 Msa0330030:CDS 30.0%
TTAGAAATTGTTCCACATGT+GGG - chr2_4:44136493-44136512 None:intergenic 30.0%
ATTAGAAATTGTTCCACATG+TGG - chr2_4:44136494-44136513 None:intergenic 30.0%
ATGTGGAACAATTTCTAATG+TGG + chr2_4:44136495-44136514 Msa0330030:exon 30.0%
! ATTCAGATTCCTTTTCAATC+CGG - chr2_4:44136627-44136646 None:intergenic 30.0%
AATCATCTACCGTTGTAATA+TGG + chr2_4:44136644-44136663 Msa0330030:three_prime_UTR 30.0%
! AGACAAAAATAGGAGTACAA+GGG + chr2_4:44136711-44136730 Msa0330030:three_prime_UTR 30.0%
!!! TTGTAGTTCATTTTAGTTGG+TGG + chr2_4:44136882-44136901 Msa0330030:three_prime_UTR 30.0%
GTGTGATTACTTGATGAAGA+AGG + chr2_4:44131527-44131546 Msa0330030:CDS 35.0%
GTCAACATCAATCATGAGAA+AGG - chr2_4:44131568-44131587 None:intergenic 35.0%
! TCAGAGCATTAATACTAACC+AGG - chr2_4:44131618-44131637 None:intergenic 35.0%
ATAGCTGTAACCATTGTTCA+AGG - chr2_4:44132169-44132188 None:intergenic 35.0%
TTGAACAATGGTTACAGCTA+TGG + chr2_4:44132168-44132187 Msa0330030:intron 35.0%
CCCACATAAAAAATGCAGAT+TGG - chr2_4:44132474-44132493 None:intergenic 35.0%
TAATAGAGATAGGTAGGTAC+AGG + chr2_4:44132567-44132586 Msa0330030:intron 35.0%
AGATGGACATAGACTTAGTT+TGG - chr2_4:44133074-44133093 None:intergenic 35.0%
AGAGAGACTTATCATTAGGA+GGG + chr2_4:44133129-44133148 Msa0330030:intron 35.0%
! GTTTTATATGCATGATCGTG+AGG + chr2_4:44133174-44133193 Msa0330030:intron 35.0%
!! GAAATCGCCATAACTAGTTT+TGG + chr2_4:44133759-44133778 Msa0330030:intron 35.0%
GAAGACATCTCAACAATTGA+TGG + chr2_4:44133841-44133860 Msa0330030:intron 35.0%
ATCTCAACAATTGATGGAAG+AGG + chr2_4:44133847-44133866 Msa0330030:intron 35.0%
CACTTAAGACCTTCAATTTG+AGG - chr2_4:44134223-44134242 None:intergenic 35.0%
CTCAAATTGAAGGTCTTAAG+TGG + chr2_4:44134221-44134240 Msa0330030:intron 35.0%
AAAAGTGATGTGTACAAGTG+GGG - chr2_4:44134248-44134267 None:intergenic 35.0%
AACAGTACCTAATAGGTACT+TGG + chr2_4:44134283-44134302 Msa0330030:intron 35.0%
TTAAGACCTCCATCTTTAAG+TGG - chr2_4:44134420-44134439 None:intergenic 35.0%
!!! CCCATTGTGGGAAAATTTTT+TGG - chr2_4:44134469-44134488 None:intergenic 35.0%
CTTTAGTGTTCTATCAAGGA+AGG + chr2_4:44134956-44134975 Msa0330030:CDS 35.0%
! CATTCAGTTTTTCTCCCTTT+AGG - chr2_4:44134985-44135004 None:intergenic 35.0%
CTAAAGGGAGAAAAACTGAA+TGG + chr2_4:44134983-44135002 Msa0330030:CDS 35.0%
TATGCATGAGTTTCGTATTG+AGG + chr2_4:44135008-44135027 Msa0330030:CDS 35.0%
ATGCATGAGTTTCGTATTGA+GGG + chr2_4:44135009-44135028 Msa0330030:CDS 35.0%
! AAAAATGACTATAGGGCACT+TGG + chr2_4:44135228-44135247 Msa0330030:intron 35.0%
!! ATAGCCTTGTATTACTTTCC+TGG + chr2_4:44135326-44135345 Msa0330030:intron 35.0%
CATACCAGGAAAGTAATACA+AGG - chr2_4:44135333-44135352 None:intergenic 35.0%
TACTTTCCTGGTATGAATGA+CGG + chr2_4:44135338-44135357 Msa0330030:intron 35.0%
GAAACCAAATTTGTCTCACA+TGG + chr2_4:44135430-44135449 Msa0330030:intron 35.0%
ATAGCCATGTGAGACAAATT+TGG - chr2_4:44135437-44135456 None:intergenic 35.0%
AATTTGTCTCACATGGCTAT+TGG + chr2_4:44135437-44135456 Msa0330030:intron 35.0%
AATTCAGAGAGGATCTACTT+AGG - chr2_4:44135499-44135518 None:intergenic 35.0%
! TTGACTCGATGACCTTAATA+TGG + chr2_4:44135709-44135728 Msa0330030:intron 35.0%
TGACTCGATGACCTTAATAT+GGG + chr2_4:44135710-44135729 Msa0330030:intron 35.0%
TAACTCTAAGTTCAAACCAG+TGG + chr2_4:44135830-44135849 Msa0330030:intron 35.0%
TTCATCACTTCCAGCATTAA+TGG + chr2_4:44136122-44136141 Msa0330030:CDS 35.0%
CTTGCTCATATTCATCTGTA+TGG - chr2_4:44136179-44136198 None:intergenic 35.0%
!!! GGTTTGGTTTTGAGAAAACA+TGG - chr2_4:44136214-44136233 None:intergenic 35.0%
TATATGGTTGTAGATTGGGT+TGG - chr2_4:44136235-44136254 None:intergenic 35.0%
!! TTGTTGGCTAGAGGTAATTT+TGG - chr2_4:44136273-44136292 None:intergenic 35.0%
! TTGTTGTTATTGTTGGCTAG+AGG - chr2_4:44136282-44136301 None:intergenic 35.0%
AACAATGCAAGTACATTTGG+AGG + chr2_4:44136297-44136316 Msa0330030:CDS 35.0%
GATAAAGGGTCTAAGCTATA+AGG - chr2_4:44136327-44136346 None:intergenic 35.0%
TGAGAGTTACTTATCTGAAG+TGG + chr2_4:44136461-44136480 Msa0330030:CDS 35.0%
! GAGAGTTACTTATCTGAAGT+GGG + chr2_4:44136462-44136481 Msa0330030:CDS 35.0%
TAGAAATTGTTCCACATGTG+GGG - chr2_4:44136492-44136511 None:intergenic 35.0%
! GATCATCTGCATCTAAAATG+TGG + chr2_4:44136576-44136595 Msa0330030:three_prime_UTR 35.0%
AGGATCCAATTTCGATGAAA+AGG + chr2_4:44136681-44136700 Msa0330030:three_prime_UTR 35.0%
! CAGACAAAAATAGGAGTACA+AGG + chr2_4:44136710-44136729 Msa0330030:three_prime_UTR 35.0%
TCCCGGTATATTAGAAAGAT+GGG + chr2_4:44136835-44136854 Msa0330030:three_prime_UTR 35.0%
!!! AGTTCATTTTAGTTGGTGGA+TGG + chr2_4:44136886-44136905 Msa0330030:three_prime_UTR 35.0%
GAGTAACATAAGCATGGTTG+AGG + chr2_4:44131455-44131474 Msa0330030:CDS 40.0%
TACTAACCAGGAATATCCCA+TGG - chr2_4:44131606-44131625 None:intergenic 40.0%
TTGTACATGCAGGGGATTAT+AGG - chr2_4:44131959-44131978 None:intergenic 40.0%
ACTGCACAATTGTACATGCA+GGG - chr2_4:44131968-44131987 None:intergenic 40.0%
ATATACACATACACGCACCA+TGG + chr2_4:44132758-44132777 Msa0330030:intron 40.0%
GCTGAGAGAGACTTATCATT+AGG + chr2_4:44133125-44133144 Msa0330030:intron 40.0%
GAGAGAGACTTATCATTAGG+AGG + chr2_4:44133128-44133147 Msa0330030:intron 40.0%
GAAAAAGAAACTGTTAGGGG+TGG + chr2_4:44133810-44133829 Msa0330030:intron 40.0%
!! AAGTCTAAGAGCATCCACAA+TGG + chr2_4:44134193-44134212 Msa0330030:intron 40.0%
AATGGAGACCCTCAAATTGA+AGG + chr2_4:44134211-44134230 Msa0330030:intron 40.0%
TTGGAGGTCTTCTATGACAT+GGG - chr2_4:44134450-44134469 None:intergenic 40.0%
TTTGGAGGTCTTCTATGACA+TGG - chr2_4:44134451-44134470 None:intergenic 40.0%
CTAATAGGTACTCCCATTGT+GGG - chr2_4:44134481-44134500 None:intergenic 40.0%
! TTAGAGCATCTACAATGGTG+AGG - chr2_4:44134528-44134547 None:intergenic 40.0%
AGAGACCGTAAATATGCAAC+AGG + chr2_4:44134835-44134854 Msa0330030:CDS 40.0%
GAGACCGTAAATATGCAACA+GGG + chr2_4:44134836-44134855 Msa0330030:CDS 40.0%
GTAGCCCTGTTGCATATTTA+CGG - chr2_4:44134843-44134862 None:intergenic 40.0%
AACTGCATCAGGTTATTGGA+AGG + chr2_4:44134876-44134895 Msa0330030:CDS 40.0%
TTATTGGAAGGCAACAGGAA+AGG + chr2_4:44134888-44134907 Msa0330030:CDS 40.0%
GACTCGATGACCTTAATATG+GGG + chr2_4:44135711-44135730 Msa0330030:intron 40.0%
ATTCGGAGGGATCTAAAGAA+GGG - chr2_4:44135865-44135884 None:intergenic 40.0%
TATTCGGAGGGATCTAAAGA+AGG - chr2_4:44135866-44135885 None:intergenic 40.0%
!! AGGAAGATTGGGTTTTGTGT+AGG + chr2_4:44136028-44136047 Msa0330030:intron 40.0%
!! GGAAGATTGGGTTTTGTGTA+GGG + chr2_4:44136029-44136048 Msa0330030:intron 40.0%
CATCTGTATGGAATTGAGCT+TGG - chr2_4:44136167-44136186 None:intergenic 40.0%
TGAGAAAACATGGAGAAGCA+GGG - chr2_4:44136204-44136223 None:intergenic 40.0%
TTGAGAAAACATGGAGAAGC+AGG - chr2_4:44136205-44136224 None:intergenic 40.0%
GCTTCAGCACCATATTACAA+CGG - chr2_4:44136656-44136675 None:intergenic 40.0%
! GTTCGCCTTTTCATCGAAAT+TGG - chr2_4:44136689-44136708 None:intergenic 40.0%
AGGCGAACACAGACAAAAAT+AGG + chr2_4:44136701-44136720 Msa0330030:three_prime_UTR 40.0%
TCTATCCACATGATATGTCC+CGG + chr2_4:44136818-44136837 Msa0330030:three_prime_UTR 40.0%
ATATACCGGGACATATCATG+TGG - chr2_4:44136826-44136845 None:intergenic 40.0%
GTCCCGGTATATTAGAAAGA+TGG + chr2_4:44136834-44136853 Msa0330030:three_prime_UTR 40.0%
CCCCATCTTTCTAATATACC+GGG - chr2_4:44136839-44136858 None:intergenic 40.0%
CCCGGTATATTAGAAAGATG+GGG + chr2_4:44136836-44136855 Msa0330030:three_prime_UTR 40.0%
GCCCCATCTTTCTAATATAC+CGG - chr2_4:44136840-44136859 None:intergenic 40.0%
! GAAAGATGGGGCTTTGTAAT+TGG + chr2_4:44136848-44136867 Msa0330030:three_prime_UTR 40.0%
CTAGGATGAAATCTGAACCC+TGG - chr2_4:44131492-44131511 None:intergenic 45.0%
CACACAAGCTCTTCATCTCT+AGG - chr2_4:44131510-44131529 None:intergenic 45.0%
ACCTTAACAAGTGTGAGCCA+TGG + chr2_4:44131586-44131605 Msa0330030:CDS 45.0%
CCTTAACAAGTGTGAGCCAT+GGG + chr2_4:44131587-44131606 Msa0330030:CDS 45.0%
CTGCACAATTGTACATGCAG+GGG - chr2_4:44131967-44131986 None:intergenic 45.0%
CACTGCACAATTGTACATGC+AGG - chr2_4:44131969-44131988 None:intergenic 45.0%
TAGAGATAGGTAGGTACAGG+TGG + chr2_4:44132570-44132589 Msa0330030:intron 45.0%
ACATACACGCACCATGGAAA+GGG + chr2_4:44132764-44132783 Msa0330030:intron 45.0%
ACTGTCTACATCCCTTTCCA+TGG - chr2_4:44132778-44132797 None:intergenic 45.0%
GAAAGGGATGTAGACAGTTG+AGG + chr2_4:44132780-44132799 Msa0330030:intron 45.0%
CAATTTGAGGGTCTCCATTG+TGG - chr2_4:44134210-44134229 None:intergenic 45.0%
GGAGTGACCAAGTACCTATT+AGG - chr2_4:44134293-44134312 None:intergenic 45.0%
TGGAGGTCTTCTATGACATG+GGG - chr2_4:44134449-44134468 None:intergenic 45.0%
CCTAATAGGTACTCCCATTG+TGG - chr2_4:44134482-44134501 None:intergenic 45.0%
!! CCACAATGGGAGTACCTATT+AGG + chr2_4:44134479-44134498 Msa0330030:intron 45.0%
!! GGGAGTACCTATTAGGTACT+AGG + chr2_4:44134486-44134505 Msa0330030:intron 45.0%
! GGGTGTTAGAGCATCTACAA+TGG - chr2_4:44134533-44134552 None:intergenic 45.0%
ACAAATCGTGCAACTGCATC+AGG + chr2_4:44134865-44134884 Msa0330030:CDS 45.0%
GTGCAACTGCATCAGGTTAT+TGG + chr2_4:44134872-44134891 Msa0330030:CDS 45.0%
TCAGGTTATTGGAAGGCAAC+AGG + chr2_4:44134883-44134902 Msa0330030:CDS 45.0%
!! TATCAAGGAAGGGCACCTAA+AGG + chr2_4:44134967-44134986 Msa0330030:CDS 45.0%
!! ATCAAGGAAGGGCACCTAAA+GGG + chr2_4:44134968-44134987 Msa0330030:CDS 45.0%
TTTCGTATTGAGGGTCCTCA+TGG + chr2_4:44135018-44135037 Msa0330030:CDS 45.0%
!! GAAATTTTAGGAGGGCCATG+AGG - chr2_4:44135036-44135055 None:intergenic 45.0%
TTTCCTGGTATGAATGACGG+AGG + chr2_4:44135341-44135360 Msa0330030:intron 45.0%
TTACCTCCGTCATTCATACC+AGG - chr2_4:44135347-44135366 None:intergenic 45.0%
TCGATGACCTTAATATGGGG+TGG + chr2_4:44135714-44135733 Msa0330030:intron 45.0%
ATGACCTTAATATGGGGTGG+TGG + chr2_4:44135717-44135736 Msa0330030:intron 45.0%
TGACCTTAATATGGGGTGGT+GGG + chr2_4:44135718-44135737 Msa0330030:intron 45.0%
AATCCCACCACCCCATATTA+AGG - chr2_4:44135724-44135743 None:intergenic 45.0%
AGAAGGGACAAATGTTCCAC+TGG - chr2_4:44135849-44135868 None:intergenic 45.0%
TGCTACAAAACCTCCAAGCA+TGG + chr2_4:44136074-44136093 Msa0330030:CDS 45.0%
GCTACAAAACCTCCAAGCAT+GGG + chr2_4:44136075-44136094 Msa0330030:CDS 45.0%
TCATAGCAACTACCCATGCT+TGG - chr2_4:44136090-44136109 None:intergenic 45.0%
GGTAGTTGCTATGATGACAC+AGG + chr2_4:44136096-44136115 Msa0330030:CDS 45.0%
!! GGTTGTAGATTGGGTTGGTT+TGG - chr2_4:44136230-44136249 None:intergenic 45.0%
!!! AGCTTGGTGATGACCCTTTT+AGG - chr2_4:44136425-44136444 None:intergenic 45.0%
AAAGGGTCATCACCAAGCTT+AGG + chr2_4:44136426-44136445 Msa0330030:CDS 45.0%
TCATCACCAAGCTTAGGTGA+AGG + chr2_4:44136432-44136451 Msa0330030:CDS 45.0%
GAACTTCCTTCACCTAAGCT+TGG - chr2_4:44136441-44136460 None:intergenic 45.0%
!! TCTAAAATGTGGTGCTGCGA+CGG + chr2_4:44136587-44136606 Msa0330030:three_prime_UTR 45.0%
GATTCAGGTCCGGATTGAAA+AGG + chr2_4:44136615-44136634 Msa0330030:three_prime_UTR 45.0%
! ATATGGTGCTGAAGCTGTAG+AGG + chr2_4:44136661-44136680 Msa0330030:three_prime_UTR 45.0%
!! TATAACAAATAAAAAAATAT+TGG + chr2_4:44132609-44132628 Msa0330030:intron 5.0%
!! AAATAATATTATTTATACTT+AGG + chr2_4:44132633-44132652 Msa0330030:intron 5.0%
!!! AAAATATTTTTGATTAATTA+AGG - chr2_4:44132877-44132896 None:intergenic 5.0%
!!! TAATCAAAAATATTTTTATT+TGG + chr2_4:44132881-44132900 Msa0330030:intron 5.0%
!!! TTCTTTTTTATAAATATTTT+TGG + chr2_4:44135203-44135222 Msa0330030:intron 5.0%
TTGAGGCAAAGCTACCACCA+GGG + chr2_4:44131472-44131491 Msa0330030:CDS 50.0%
GGATGAAATCTGAACCCTGG+TGG - chr2_4:44131489-44131508 None:intergenic 50.0%
! CCCATGGCTCACACTTGTTA+AGG - chr2_4:44131590-44131609 None:intergenic 50.0%
TGTGAGCCATGGGATATTCC+TGG + chr2_4:44131597-44131616 Msa0330030:CDS 50.0%
CACATACACGCACCATGGAA+AGG + chr2_4:44132763-44132782 Msa0330030:intron 50.0%
GTGTGGGGACCACTTAAAGA+TGG + chr2_4:44134408-44134427 Msa0330030:intron 50.0%
TGGGGACCACTTAAAGATGG+AGG + chr2_4:44134411-44134430 Msa0330030:intron 50.0%
GACAGAGCTATCCTTCGCAA+GGG + chr2_4:44134910-44134929 Msa0330030:CDS 50.0%
TAGCAACTACCCATGCTTGG+AGG - chr2_4:44136087-44136106 None:intergenic 50.0%
GTTGAGGCAAAGCTACCACC+AGG + chr2_4:44131471-44131490 Msa0330030:CDS 55.0%
TGGTGCAGAAGCAGCATGTG+TGG + chr2_4:44134783-44134802 Msa0330030:intron 55.0%
GGTGCAGAAGCAGCATGTGT+GGG + chr2_4:44134784-44134803 Msa0330030:intron 55.0%
CAGAAGCAGCATGTGTGGGA+GGG + chr2_4:44134788-44134807 Msa0330030:intron 55.0%
CATGTGTGGGAGGGAAAGAG+TGG + chr2_4:44134797-44134816 Msa0330030:CDS 55.0%
GGACAGAGCTATCCTTCGCA+AGG + chr2_4:44134909-44134928 Msa0330030:CDS 55.0%
!! CAACAAGAGTGCCCTTGCGA+AGG - chr2_4:44134924-44134943 None:intergenic 55.0%
!! CTTCGCAAGGGCACTCTTGT+TGG + chr2_4:44134922-44134941 Msa0330030:CDS 55.0%
AAGTGGGTATGCCCCACATG+TGG + chr2_4:44136478-44136497 Msa0330030:CDS 55.0%
GACGGTAGAGGATTCAGGTC+CGG + chr2_4:44136605-44136624 Msa0330030:three_prime_UTR 55.0%
GCAGAAGCAGCATGTGTGGG+AGG + chr2_4:44134787-44134806 Msa0330030:intron 60.0%
!! ATGTGGTGCTGCGACGGTAG+AGG + chr2_4:44136593-44136612 Msa0330030:three_prime_UTR 60.0%
GCTGCGACGGTAGAGGATTC+AGG + chr2_4:44136600-44136619 Msa0330030:three_prime_UTR 60.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 44131359 44137019 44131359 ID=Msa0330030;Name=Msa0330030
chr2_4 mRNA 44131359 44137019 44131359 ID=Msa0330030-mRNA-1;Parent=Msa0330030;Name=Msa0330030-mRNA-1;_AED=0.02;_eAED=0.02;_QI=94|1|1|1|1|1|3|507|307
chr2_4 exon 44131359 44131618 44131359 ID=Msa0330030-mRNA-1:exon:13433;Parent=Msa0330030-mRNA-1
chr2_4 exon 44134791 44135065 44134791 ID=Msa0330030-mRNA-1:exon:13434;Parent=Msa0330030-mRNA-1
chr2_4 exon 44136030 44137019 44136030 ID=Msa0330030-mRNA-1:exon:13435;Parent=Msa0330030-mRNA-1
chr2_4 five_prime_UTR 44131359 44131452 44131359 ID=Msa0330030-mRNA-1:five_prime_utr;Parent=Msa0330030-mRNA-1
chr2_4 CDS 44131453 44131618 44131453 ID=Msa0330030-mRNA-1:cds;Parent=Msa0330030-mRNA-1
chr2_4 CDS 44134791 44135065 44134791 ID=Msa0330030-mRNA-1:cds;Parent=Msa0330030-mRNA-1
chr2_4 CDS 44136030 44136512 44136030 ID=Msa0330030-mRNA-1:cds;Parent=Msa0330030-mRNA-1
chr2_4 three_prime_UTR 44136513 44137019 44136513 ID=Msa0330030-mRNA-1:three_prime_utr;Parent=Msa0330030-mRNA-1
Gene Sequence

>Msa0330030

ATGAGTAACATAAGCATGGTTGAGGCAAAGCTACCACCAGGGTTCAGATTTCATCCTAGAGATGAAGAGCTTGTGTGTGATTACTTGATGAAGAAGGTGACTCATAGTGATTCCTTTCTCATGATTGATGTTGACCTTAACAAGTGTGAGCCATGGGATATTCCTGAAGCAGCATGTGTGGGAGGGAAAGAGTGGTATTTCTATACACAAAGAGACCGTAAATATGCAACAGGGCTACGCACAAATCGTGCAACTGCATCAGGTTATTGGAAGGCAACAGGAAAGGACAGAGCTATCCTTCGCAAGGGCACTCTTGTTGGAATGAGAAAGACTTTAGTGTTCTATCAAGGAAGGGCACCTAAAGGGAGAAAAACTGAATGGGTTATGCATGAGTTTCGTATTGAGGGTCCTCATGGCCCTCCTAAAATTTCATCTTCTAAGGAAGATTGGGTTTTGTGTAGGGTGTTCTACAAAAACAGAGAAGTTGCTACAAAACCTCCAAGCATGGGTAGTTGCTATGATGACACAGGCTCTTCATCACTTCCAGCATTAATGGATTCTTACATAAGTTTTGACCAAGCTCAATTCCATACAGATGAATATGAGCAAGTGCCCTGCTTCTCCATGTTTTCTCAAAACCAAACCAACCCAATCTACAACCATATAACAACCAATATGGAACCAAAATTACCTCTAGCCAACAATAACAACAATGCAAGTACATTTGGAGGAGCACCTTATAGCTTAGACCCTTTATCATGTGATAGAAAAGTGTTGAAAGCTGTTTTGAGTCAACTATCAAAGATGGAAAGAAACCCTATTAATGATCAAAACCTAAAAGGGTCATCACCAAGCTTAGGTGAAGGAAGTTCTGAGAGTTACTTATCTGAAGTGGGTATGCCCCACATGTGGAACAATTTCTAA
Protein sequence

>Msa0330030

MSNISMVEAKLPPGFRFHPRDEELVCDYLMKKVTHSDSFLMIDVDLNKCEPWDIPEAACVGGKEWYFYTQRDRKYATGLRTNRATASGYWKATGKDRAILRKGTLVGMRKTLVFYQGRAPKGRKTEWVMHEFRIEGPHGPPKISSSKEDWVLCRVFYKNREVATKPPSMGSCYDDTGSSSLPALMDSYISFDQAQFHTDEYEQVPCFSMFSQNQTNPIYNHITTNMEPKLPLANNNNNASTFGGAPYSLDPLSCDRKVLKAVLSQLSKMERNPINDQNLKGSSPSLGEGSSESYLSEVGMPHMWNNF*