Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0713060 | XP_013446279.1 | 99.359 | 312 | 2 | 0 | 1 | 312 | 1 | 312 | 0.0 | 633 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0713060 | sp|P52581|IFRH_LUPAL | 77.885 | 312 | 69 | 0 | 1 | 312 | 1 | 312 | 0.0 | 508 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0713060 | A0A072TT01 | 99.359 | 312 | 2 | 0 | 1 | 312 | 1 | 312 | 0.0 | 633 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001830 | Msa0713060 | 0.836646 | 8.285375e-57 | -8.615850e-47 |
| Msa0004480 | Msa0713060 | 0.856653 | 2.780887e-62 | -8.615850e-47 |
| Msa0005260 | Msa0713060 | 0.819349 | 1.216676e-52 | -8.615850e-47 |
| Msa0010800 | Msa0713060 | 0.828839 | 7.190193e-55 | -8.615850e-47 |
| Msa0037720 | Msa0713060 | 0.817836 | 2.681939e-52 | -8.615850e-47 |
| Msa0052780 | Msa0713060 | 0.857655 | 1.408129e-62 | -8.615850e-47 |
| Msa0054770 | Msa0713060 | 0.803589 | 3.243169e-49 | -8.615850e-47 |
| Msa0077370 | Msa0713060 | 0.830052 | 3.647786e-55 | -8.615850e-47 |
| Msa0083240 | Msa0713060 | 0.837682 | 4.500964e-57 | -8.615850e-47 |
| Msa0086190 | Msa0713060 | 0.806024 | 1.005460e-49 | -8.615850e-47 |
| Msa0087550 | Msa0713060 | 0.819731 | 9.958059e-53 | -8.615850e-47 |
| Msa0090380 | Msa0713060 | 0.843258 | 1.565009e-58 | -8.615850e-47 |
| Msa0094710 | Msa0713060 | 0.823229 | 1.550294e-53 | -8.615850e-47 |
| Msa0097570 | Msa0713060 | 0.858348 | 8.762888e-63 | -8.615850e-47 |
| Msa0100750 | Msa0713060 | 0.844080 | 9.431257e-59 | -8.615850e-47 |
| Msa0104810 | Msa0713060 | 0.829329 | 5.469948e-55 | -8.615850e-47 |
| Msa0610830 | Msa0713060 | 0.802840 | 4.635297e-49 | -8.615850e-47 |
| Msa0611060 | Msa0713060 | 0.870617 | 1.275011e-66 | -8.615850e-47 |
| Msa0614290 | Msa0713060 | 0.811588 | 6.494170e-51 | -8.615850e-47 |
| Msa0614480 | Msa0713060 | 0.810085 | 1.373179e-50 | -8.615850e-47 |
| Msa0615200 | Msa0713060 | 0.810903 | 9.144450e-51 | -8.615850e-47 |
| Msa0615210 | Msa0713060 | 0.813549 | 2.419654e-51 | -8.615850e-47 |
| Msa0618550 | Msa0713060 | 0.843580 | 1.283761e-58 | -8.615850e-47 |
| Msa0631320 | Msa0713060 | 0.842329 | 2.764011e-58 | -8.615850e-47 |
| Msa0638810 | Msa0713060 | 0.807060 | 6.076975e-50 | -8.615850e-47 |
| Msa0638820 | Msa0713060 | 0.803979 | 2.691226e-49 | -8.615850e-47 |
| Msa0639110 | Msa0713060 | 0.833448 | 5.303094e-56 | -8.615850e-47 |
| Msa0642920 | Msa0713060 | 0.805500 | 1.295724e-49 | -8.615850e-47 |
| Msa0657340 | Msa0713060 | 0.839790 | 1.283553e-57 | -8.615850e-47 |
| Msa0669700 | Msa0713060 | 0.810388 | 1.181665e-50 | -8.615850e-47 |
| Msa0669740 | Msa0713060 | 0.816621 | 5.032705e-52 | -8.615850e-47 |
| Msa0679670 | Msa0713060 | 0.842534 | 2.438754e-58 | -8.615850e-47 |
| Msa0693750 | Msa0713060 | 0.838045 | 3.631155e-57 | -8.615850e-47 |
| Msa0697510 | Msa0713060 | 0.818269 | 2.140617e-52 | -8.615850e-47 |
| Msa0697520 | Msa0713060 | 0.806976 | 6.332799e-50 | -8.615850e-47 |
| Msa0697680 | Msa0713060 | 0.807349 | 5.279922e-50 | -8.615850e-47 |
| Msa0701430 | Msa0713060 | 0.829541 | 4.860247e-55 | -8.615850e-47 |
| Msa0708600 | Msa0713060 | 0.822358 | 2.472002e-53 | -8.615850e-47 |
| Msa0713060 | Msa0734280 | 0.804094 | 2.547995e-49 | -8.615850e-47 |
| Msa0713060 | Msa0737430 | 0.852961 | 3.273971e-61 | -8.615850e-47 |
| Msa0713060 | Msa0744540 | 0.826271 | 2.973742e-54 | -8.615850e-47 |
| Msa0713060 | Msa0744550 | 0.830774 | 2.429837e-55 | -8.615850e-47 |
| Msa0713060 | Msa0744560 | 0.840022 | 1.116326e-57 | -8.615850e-47 |
| Msa0713060 | Msa0744640 | 0.854430 | 1.237405e-61 | -8.615850e-47 |
| Msa0713060 | Msa0772490 | 0.844149 | 9.038710e-59 | -8.615850e-47 |
| Msa0713060 | Msa0779230 | 0.814337 | 1.622041e-51 | -8.615850e-47 |
| Msa0713060 | Msa0787790 | 0.811456 | 6.937939e-51 | -8.615850e-47 |
| Msa0713060 | Msa0798450 | 0.812982 | 3.222634e-51 | -8.615850e-47 |
| Msa0713060 | Msa0804870 | 0.819094 | 1.391161e-52 | -8.615850e-47 |
| Msa0713060 | Msa0810440 | 0.807349 | 5.277942e-50 | -8.615850e-47 |
| Msa0713060 | Msa0812530 | 0.802174 | 6.358869e-49 | -8.615850e-47 |
| Msa0713060 | Msa0816630 | 0.887229 | 1.714123e-72 | -8.615850e-47 |
| Msa0713060 | Msa0826370 | 0.814621 | 1.403628e-51 | -8.615850e-47 |
| Msa0713060 | Msa0826380 | 0.887707 | 1.126305e-72 | -8.615850e-47 |
| Msa0713060 | Msa0826450 | 0.868505 | 6.212601e-66 | -8.615850e-47 |
| Msa0713060 | Msa0829050 | 0.805975 | 1.029857e-49 | -8.615850e-47 |
| Msa0713060 | Msa0832620 | 0.824488 | 7.855782e-54 | -8.615850e-47 |
| Msa0713060 | Msa0841730 | 0.853280 | 2.652168e-61 | -8.615850e-47 |
| Msa0713060 | Msa0848020 | 0.800138 | 1.658924e-48 | -8.615850e-47 |
| Msa0713060 | Msa0852790 | 0.802448 | 5.582580e-49 | -8.615850e-47 |
| Msa0713060 | Msa0863940 | 0.878587 | 2.488758e-69 | -8.615850e-47 |
| Msa0713060 | Msa0863990 | 0.848712 | 5.146937e-60 | -8.615850e-47 |
| Msa0713060 | Msa0865810 | 0.841719 | 4.005687e-58 | -8.615850e-47 |
| Msa0713060 | Msa0865820 | 0.837664 | 4.548801e-57 | -8.615850e-47 |
| Msa0713060 | Msa0865830 | 0.824516 | 7.738052e-54 | -8.615850e-47 |
| Msa0713060 | Msa0870510 | 0.820085 | 8.261816e-53 | -8.615850e-47 |
| Msa0713060 | Msa0873910 | 0.805560 | 1.258369e-49 | -8.615850e-47 |
| Msa0713060 | Msa0874640 | 0.819715 | 1.004208e-52 | -8.615850e-47 |
| Msa0713060 | Msa0881510 | 0.829196 | 5.891572e-55 | -8.615850e-47 |
| Msa0713060 | Msa0930740 | 0.869684 | 2.574148e-66 | -8.615850e-47 |
| Msa0713060 | Msa0945130 | 0.831108 | 2.012470e-55 | -8.615850e-47 |
| Msa0713060 | Msa0965780 | 0.818296 | 2.111185e-52 | -8.615850e-47 |
| Msa0713060 | Msa0975960 | 0.824706 | 6.980135e-54 | -8.615850e-47 |
| Msa0713060 | Msa1000800 | 0.834357 | 3.140729e-56 | -8.615850e-47 |
| Msa0713060 | Msa1011250 | 0.823441 | 1.383035e-53 | -8.615850e-47 |
| Msa0713060 | Msa1016960 | 0.856949 | 2.276054e-62 | -8.615850e-47 |
| Msa0713060 | Msa1023310 | 0.800767 | 1.234876e-48 | -8.615850e-47 |
| Msa0713060 | Msa1028660 | 0.812970 | 3.243165e-51 | -8.615850e-47 |
| Msa0713060 | Msa1029520 | 0.801091 | 1.060333e-48 | -8.615850e-47 |
| Msa0713060 | Msa1030200 | 0.803383 | 3.579371e-49 | -8.615850e-47 |
| Msa0713060 | Msa1030210 | 0.800005 | 1.765279e-48 | -8.615850e-47 |
| Msa0713060 | Msa1058200 | 0.863869 | 1.828663e-64 | -8.615850e-47 |
| Msa0713060 | Msa1062040 | 0.830068 | 3.615507e-55 | -8.615850e-47 |
| Msa0713060 | Msa1062080 | 0.833291 | 5.801307e-56 | -8.615850e-47 |
| Msa0713060 | Msa1064240 | 0.809567 | 1.775071e-50 | -8.615850e-47 |
| Msa0713060 | Msa1068380 | 0.816483 | 5.402136e-52 | -8.615850e-47 |
| Msa0713060 | Msa1069340 | 0.806087 | 9.753176e-50 | -8.615850e-47 |
| Msa0713060 | Msa1077970 | 0.802098 | 6.590097e-49 | -8.615850e-47 |
| Msa0713060 | Msa1106310 | 0.819199 | 1.316599e-52 | -8.615850e-47 |
| Msa0713060 | Msa1107200 | 0.813415 | 2.589487e-51 | -8.615850e-47 |
| Msa0713060 | Msa1107230 | 0.831024 | 2.109494e-55 | -8.615850e-47 |
| Msa0713060 | Msa1113100 | 0.850912 | 1.249225e-60 | -8.615850e-47 |
| Msa0713060 | Msa1121300 | 0.812486 | 4.138054e-51 | -8.615850e-47 |
| Msa0713060 | Msa1131430 | 0.825576 | 4.347193e-54 | -8.615850e-47 |
| Msa0713060 | Msa1131790 | 0.810544 | 1.093281e-50 | -8.615850e-47 |
| Msa0713060 | Msa1150780 | 0.822687 | 2.073734e-53 | -8.615850e-47 |
| Msa0713060 | Msa1154240 | 0.818501 | 1.896565e-52 | -8.615850e-47 |
| Msa0713060 | Msa1156490 | 0.815202 | 1.043086e-51 | -8.615850e-47 |
| Msa0713060 | Msa1157110 | 0.817154 | 3.819690e-52 | -8.615850e-47 |
| Msa0713060 | Msa1159170 | 0.807688 | 4.473122e-50 | -8.615850e-47 |
| Msa0713060 | Msa1173150 | 0.856875 | 2.392744e-62 | -8.615850e-47 |
| Msa0713060 | Msa1174280 | 0.818030 | 2.424495e-52 | -8.615850e-47 |
| Msa0713060 | Msa1180720 | 0.816244 | 6.110443e-52 | -8.615850e-47 |
| Msa0713060 | Msa1181060 | 0.808958 | 2.397569e-50 | -8.615850e-47 |
| Msa0713060 | Msa1183140 | 0.801620 | 8.262601e-49 | -8.615850e-47 |
| Msa0713060 | Msa1199870 | 0.975717 | 1.817760e-140 | -8.615850e-47 |
| Msa0713060 | Msa1202110 | 0.827297 | 1.690962e-54 | -8.615850e-47 |
| Msa0713060 | Msa1202470 | 0.829814 | 4.169474e-55 | -8.615850e-47 |
| Msa0713060 | Msa1203810 | 0.806714 | 7.191603e-50 | -8.615850e-47 |
| Msa0713060 | Msa1208990 | 0.825526 | 4.468333e-54 | -8.615850e-47 |
| Msa0713060 | Msa1212470 | 0.833345 | 5.624220e-56 | -8.615850e-47 |
| Msa0713060 | Msa1214170 | 0.801701 | 7.953951e-49 | -8.615850e-47 |
| Msa0713060 | Msa1217260 | 0.844955 | 5.484099e-59 | -8.615850e-47 |
| Msa0713060 | Msa1218160 | 0.866166 | 3.478595e-65 | -8.615850e-47 |
| Msa0713060 | Msa1221220 | 0.848314 | 6.632211e-60 | -8.615850e-47 |
| Msa0713060 | Msa1225580 | 0.869495 | 2.967271e-66 | -8.615850e-47 |
| Msa0713060 | Msa1234540 | 0.805844 | 1.097290e-49 | -8.615850e-47 |
| Msa0713060 | Msa1238680 | 0.821193 | 4.599805e-53 | -8.615850e-47 |
| Msa0713060 | Msa1252810 | 0.998170 | 7.322757e-258 | -8.615850e-47 |
| Msa0713060 | Msa1254870 | 0.824868 | 6.391348e-54 | -8.615850e-47 |
| Msa0713060 | Msa1254910 | 0.801802 | 7.581830e-49 | -8.615850e-47 |
| Msa0713060 | Msa1260060 | 0.808452 | 3.075236e-50 | -8.615850e-47 |
| Msa0713060 | Msa1262540 | 0.825249 | 5.195973e-54 | -8.615850e-47 |
| Msa0713060 | Msa1269060 | 0.822954 | 1.796704e-53 | -8.615850e-47 |
| Msa0713060 | Msa1274380 | 0.818232 | 2.182812e-52 | -8.615850e-47 |
| Msa0713060 | Msa1279100 | 0.841171 | 5.585221e-58 | -8.615850e-47 |
| Msa0713060 | Msa1284090 | 0.846751 | 1.783613e-59 | -8.615850e-47 |
| Msa0713060 | Msa1296240 | 0.803172 | 3.957624e-49 | -8.615850e-47 |
| Msa0713060 | Msa1299780 | 0.830500 | 2.835700e-55 | -8.615850e-47 |
| Msa0713060 | Msa1299910 | 0.812692 | 3.730716e-51 | -8.615850e-47 |
| Msa0713060 | Msa1302340 | 0.802813 | 4.693930e-49 | -8.615850e-47 |
| Msa0713060 | Msa1309760 | 0.811516 | 6.731465e-51 | -8.615850e-47 |
| Msa0713060 | Msa1312440 | 0.811011 | 8.667090e-51 | -8.615850e-47 |
| Msa0713060 | Msa1322180 | 0.800259 | 1.567619e-48 | -8.615850e-47 |
| Msa0713060 | Msa1322410 | 0.812740 | 3.642086e-51 | -8.615850e-47 |
| Msa0713060 | Msa1328430 | 0.822917 | 1.832430e-53 | -8.615850e-47 |
| Msa0713060 | Msa1329900 | 0.829885 | 4.007603e-55 | -8.615850e-47 |
| Msa0713060 | Msa1349830 | 0.804168 | 2.458698e-49 | -8.615850e-47 |
| Msa0713060 | Msa1350700 | 0.831501 | 1.610605e-55 | -8.615850e-47 |
| Msa0713060 | Msa1355510 | 0.877741 | 4.928757e-69 | -8.615850e-47 |
| Msa0713060 | Msa1358090 | 0.826405 | 2.762483e-54 | -8.615850e-47 |
| Msa0713060 | Msa1359610 | 0.820479 | 6.710401e-53 | -8.615850e-47 |
| Msa0713060 | Msa1360020 | 0.807318 | 5.358400e-50 | -8.615850e-47 |
| Msa0713060 | Msa1360260 | 0.826402 | 2.767303e-54 | -8.615850e-47 |
| Msa0713060 | Msa1369320 | 0.815827 | 7.573559e-52 | -8.615850e-47 |
| Msa0713060 | Msa1379020 | 0.802194 | 6.297604e-49 | -8.615850e-47 |
| Msa0713060 | Msa1397390 | 0.819822 | 9.489456e-53 | -8.615850e-47 |
| Msa0713060 | Msa1401110 | 0.806614 | 7.553404e-50 | -8.615850e-47 |
| Msa0713060 | Msa1403690 | 0.865759 | 4.678499e-65 | -8.615850e-47 |
| Msa0713060 | Msa1404050 | 0.815967 | 7.046869e-52 | -8.615850e-47 |
| Msa0713060 | Msa1411370 | 0.807115 | 5.918864e-50 | -8.615850e-47 |
| Msa0713060 | Msa1412410 | 0.889988 | 1.477805e-73 | -8.615850e-47 |
| Msa0713060 | Msa1413150 | 0.821930 | 3.106289e-53 | -8.615850e-47 |
| Msa0713060 | Msa1422230 | 0.841561 | 4.410986e-58 | -8.615850e-47 |
| Msa0713060 | Msa1427860 | 0.884628 | 1.629836e-71 | -8.615850e-47 |
| Msa0713060 | Msa1429470 | 0.822533 | 2.251877e-53 | -8.615850e-47 |
| Msa0713060 | Msa1433410 | 0.837504 | 4.999152e-57 | -8.615850e-47 |
| Msa0713060 | Msa1435320 | 0.868605 | 5.766168e-66 | -8.615850e-47 |
| Msa0713060 | Msa1439860 | 0.803201 | 3.903431e-49 | -8.615850e-47 |
| Msa0713060 | Msa1443400 | 0.865766 | 4.654050e-65 | -8.615850e-47 |
| Msa0713060 | Msa1443620 | 0.838841 | 2.262514e-57 | -8.615850e-47 |
| Msa0713060 | Msa1448040 | 0.867766 | 1.074627e-65 | -8.615850e-47 |
| Msa0713060 | Msa1459190 | 0.802500 | 5.446357e-49 | -8.615850e-47 |
| Msa0713060 | Msa1459920 | 0.863770 | 1.963424e-64 | -8.615850e-47 |
| Msa0713060 | Msa1465860 | 0.815508 | 8.919820e-52 | -8.615850e-47 |
| Msa0129640 | Msa0713060 | 0.890609 | 8.436257e-74 | -8.615850e-47 |
| Msa0132430 | Msa0713060 | 0.820391 | 7.032324e-53 | -8.615850e-47 |
| Msa0137860 | Msa0713060 | 0.835083 | 2.062334e-56 | -8.615850e-47 |
| Msa0138180 | Msa0713060 | 0.820762 | 5.779298e-53 | -8.615850e-47 |
| Msa0138900 | Msa0713060 | 0.817989 | 2.476714e-52 | -8.615850e-47 |
| Msa0145430 | Msa0713060 | 0.858117 | 1.026643e-62 | -8.615850e-47 |
| Msa0147790 | Msa0713060 | 0.848110 | 7.553602e-60 | -8.615850e-47 |
| Msa0151220 | Msa0713060 | 0.801677 | 8.044309e-49 | -8.615850e-47 |
| Msa0170770 | Msa0713060 | 0.802709 | 4.933021e-49 | -8.615850e-47 |
| Msa0174100 | Msa0713060 | 0.816940 | 4.266849e-52 | -8.615850e-47 |
| Msa0178000 | Msa0713060 | 0.812795 | 3.541702e-51 | -8.615850e-47 |
| Msa0182020 | Msa0713060 | 0.834571 | 2.776043e-56 | -8.615850e-47 |
| Msa0186240 | Msa0713060 | 0.807116 | 5.915571e-50 | -8.615850e-47 |
| Msa0196880 | Msa0713060 | 0.835807 | 1.353025e-56 | -8.615850e-47 |
| Msa0202380 | Msa0713060 | 0.802646 | 5.082810e-49 | -8.615850e-47 |
| Msa0203090 | Msa0713060 | 0.815059 | 1.122120e-51 | -8.615850e-47 |
| Msa0212870 | Msa0713060 | 0.809296 | 2.030071e-50 | -8.615850e-47 |
| Msa0223140 | Msa0713060 | 0.835481 | 1.636944e-56 | -8.615850e-47 |
| Msa0225850 | Msa0713060 | 0.816818 | 4.545535e-52 | -8.615850e-47 |
| Msa0238710 | Msa0713060 | 0.828215 | 1.017328e-54 | -8.615850e-47 |
| Msa0366780 | Msa0713060 | 0.847748 | 9.501342e-60 | -8.615850e-47 |
| Msa0366810 | Msa0713060 | 0.816919 | 4.314065e-52 | -8.615850e-47 |
| Msa0367540 | Msa0713060 | -0.807344 | 5.291296e-50 | -8.615850e-47 |
| Msa0374290 | Msa0713060 | 0.802669 | 5.028466e-49 | -8.615850e-47 |
| Msa0383900 | Msa0713060 | 0.825466 | 4.615661e-54 | -8.615850e-47 |
| Msa0390790 | Msa0713060 | 0.800729 | 1.256972e-48 | -8.615850e-47 |
| Msa0393100 | Msa0713060 | 0.846270 | 2.413598e-59 | -8.615850e-47 |
| Msa0397790 | Msa0713060 | 0.820112 | 8.147562e-53 | -8.615850e-47 |
| Msa0402800 | Msa0713060 | 0.859678 | 3.502861e-63 | -8.615850e-47 |
| Msa0413870 | Msa0713060 | 0.829144 | 6.065185e-55 | -8.615850e-47 |
| Msa0414730 | Msa0713060 | 0.844419 | 7.647720e-59 | -8.615850e-47 |
| Msa0434300 | Msa0713060 | 0.818731 | 1.682328e-52 | -8.615850e-47 |
| Msa0434400 | Msa0713060 | 0.836050 | 1.174262e-56 | -8.615850e-47 |
| Msa0443450 | Msa0713060 | 0.837260 | 5.774608e-57 | -8.615850e-47 |
| Msa0449620 | Msa0713060 | 0.835578 | 1.546320e-56 | -8.615850e-47 |
| Msa0456770 | Msa0713060 | 0.804097 | 2.543562e-49 | -8.615850e-47 |
| Msa0460670 | Msa0713060 | -0.810982 | 8.790463e-51 | -8.615850e-47 |
| Msa0476770 | Msa0713060 | 0.806731 | 7.132396e-50 | -8.615850e-47 |
| Msa0480530 | Msa0713060 | 0.828650 | 7.990080e-55 | -8.615850e-47 |
| Msa0480540 | Msa0713060 | 0.828150 | 1.054858e-54 | -8.615850e-47 |
| Msa0480550 | Msa0713060 | 0.838969 | 2.096708e-57 | -8.615850e-47 |
| Msa0246140 | Msa0713060 | 0.852193 | 5.419724e-61 | -8.615850e-47 |
| Msa0254640 | Msa0713060 | 0.831296 | 1.808774e-55 | -8.615850e-47 |
| Msa0260520 | Msa0713060 | 0.816152 | 6.408604e-52 | -8.615850e-47 |
| Msa0264520 | Msa0713060 | 0.801579 | 8.425963e-49 | -8.615850e-47 |
| Msa0264680 | Msa0713060 | 0.877865 | 4.459602e-69 | -8.615850e-47 |
| Msa0265480 | Msa0713060 | 0.822286 | 2.568951e-53 | -8.615850e-47 |
| Msa0266220 | Msa0713060 | 0.815542 | 8.765008e-52 | -8.615850e-47 |
| Msa0276430 | Msa0713060 | 0.871295 | 7.619395e-67 | -8.615850e-47 |
| Msa0281050 | Msa0713060 | 0.816662 | 4.926631e-52 | -8.615850e-47 |
| Msa0284730 | Msa0713060 | 0.827358 | 1.635080e-54 | -8.615850e-47 |
| Msa0287680 | Msa0713060 | 0.825996 | 3.455832e-54 | -8.615850e-47 |
| Msa0302510 | Msa0713060 | 0.813948 | 1.976243e-51 | -8.615850e-47 |
| Msa0302730 | Msa0713060 | 0.866566 | 2.597298e-65 | -8.615850e-47 |
| Msa0306310 | Msa0713060 | 0.868957 | 4.435415e-66 | -8.615850e-47 |
| Msa0316470 | Msa0713060 | 0.876747 | 1.092139e-68 | -8.615850e-47 |
| Msa0319680 | Msa0713060 | 0.840568 | 8.037993e-58 | -8.615850e-47 |
| Msa0320230 | Msa0713060 | 0.813083 | 3.062794e-51 | -8.615850e-47 |
| Msa0330030 | Msa0713060 | 0.800981 | 1.116446e-48 | -8.615850e-47 |
| Msa0332360 | Msa0713060 | 0.814501 | 1.491699e-51 | -8.615850e-47 |
| Msa0339720 | Msa0713060 | 0.830096 | 3.558852e-55 | -8.615850e-47 |
| Msa0340370 | Msa0713060 | 0.825554 | 4.399138e-54 | -8.615850e-47 |
| Msa0345890 | Msa0713060 | 0.818216 | 2.200310e-52 | -8.615850e-47 |
| Msa0345980 | Msa0713060 | 0.826099 | 3.266598e-54 | -8.615850e-47 |
| Msa0351050 | Msa0713060 | 0.821282 | 4.385671e-53 | -8.615850e-47 |
| Msa0356580 | Msa0713060 | 0.801402 | 9.159887e-49 | -8.615850e-47 |
| Msa0486980 | Msa0713060 | 0.814900 | 1.217104e-51 | -8.615850e-47 |
| Msa0488580 | Msa0713060 | 0.867202 | 1.628569e-65 | -8.615850e-47 |
| Msa0490320 | Msa0713060 | 0.813832 | 2.096391e-51 | -8.615850e-47 |
| Msa0497690 | Msa0713060 | 0.805633 | 1.214886e-49 | -8.615850e-47 |
| Msa0497860 | Msa0713060 | 0.861634 | 8.941541e-64 | -8.615850e-47 |
| Msa0506370 | Msa0713060 | 0.817720 | 2.848630e-52 | -8.615850e-47 |
| Msa0515540 | Msa0713060 | 0.804740 | 1.868710e-49 | -8.615850e-47 |
| Msa0515590 | Msa0713060 | 0.806420 | 8.298713e-50 | -8.615850e-47 |
| Msa0522140 | Msa0713060 | 0.812044 | 5.168936e-51 | -8.615850e-47 |
| Msa0522170 | Msa0713060 | 0.810626 | 1.049700e-50 | -8.615850e-47 |
| Msa0529000 | Msa0713060 | 0.826531 | 2.577634e-54 | -8.615850e-47 |
| Msa0534610 | Msa0713060 | 0.800869 | 1.176921e-48 | -8.615850e-47 |
| Msa0534870 | Msa0713060 | 0.838464 | 2.831072e-57 | -8.615850e-47 |
| Msa0547060 | Msa0713060 | 0.805860 | 1.088539e-49 | -8.615850e-47 |
| Msa0549140 | Msa0713060 | 0.815930 | 7.183665e-52 | -8.615850e-47 |
| Msa0560280 | Msa0713060 | 0.820955 | 5.217242e-53 | -8.615850e-47 |
| Msa0560460 | Msa0713060 | 0.831101 | 2.019665e-55 | -8.615850e-47 |
| Msa0561360 | Msa0713060 | 0.816421 | 5.577324e-52 | -8.615850e-47 |
| Msa0565180 | Msa0713060 | 0.824006 | 1.019814e-53 | -8.615850e-47 |
| Msa0567370 | Msa0713060 | 0.805549 | 1.265026e-49 | -8.615850e-47 |
| Msa0570700 | Msa0713060 | 0.822930 | 1.819863e-53 | -8.615850e-47 |
| Msa0573950 | Msa0713060 | 0.851475 | 8.663393e-61 | -8.615850e-47 |
| Msa0574930 | Msa0713060 | 0.840904 | 6.563097e-58 | -8.615850e-47 |
| Msa0576560 | Msa0713060 | 0.848406 | 6.256409e-60 | -8.615850e-47 |
| Msa0578460 | Msa0713060 | 0.820288 | 7.425503e-53 | -8.615850e-47 |
| Msa0584580 | Msa0713060 | 0.858363 | 8.673062e-63 | -8.615850e-47 |
| Msa0584600 | Msa0713060 | 0.848513 | 5.842055e-60 | -8.615850e-47 |
| Msa0600590 | Msa0713060 | 0.815981 | 6.994744e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0713060 | MtrunA17_Chr8g0369391 | 99.359 | 312 | 2 | 0 | 1 | 312 | 1 | 312 | 0.0 | 633 |
| Msa0713060 | MtrunA17_Chr5g0409641 | 75.241 | 311 | 76 | 1 | 1 | 311 | 1 | 310 | 2.25e-179 | 497 |
| Msa0713060 | MtrunA17_Chr5g0409651 | 75.884 | 311 | 74 | 1 | 1 | 311 | 1 | 310 | 2.77e-179 | 497 |
| Msa0713060 | MtrunA17_Chr5g0404471 | 48.726 | 314 | 150 | 5 | 2 | 312 | 4 | 309 | 6.39e-96 | 286 |
| Msa0713060 | MtrunA17_Chr3g0144701 | 48.710 | 310 | 152 | 4 | 4 | 312 | 9 | 312 | 1.13e-95 | 285 |
| Msa0713060 | MtrunA17_Chr3g0141691 | 47.588 | 311 | 156 | 3 | 3 | 312 | 4 | 308 | 2.22e-94 | 282 |
| Msa0713060 | MtrunA17_Chr3g0141681 | 46.178 | 314 | 160 | 4 | 2 | 312 | 3 | 310 | 9.18e-93 | 278 |
| Msa0713060 | MtrunA17_Chr4g0035131 | 43.226 | 310 | 169 | 3 | 1 | 309 | 42 | 345 | 6.02e-82 | 252 |
| Msa0713060 | MtrunA17_Chr4g0035111 | 42.671 | 307 | 169 | 3 | 4 | 309 | 7 | 307 | 9.66e-79 | 243 |
| Msa0713060 | MtrunA17_Chr5g0404481 | 40.432 | 324 | 170 | 8 | 3 | 312 | 4 | 318 | 1.15e-73 | 229 |
| Msa0713060 | MtrunA17_Chr5g0404511 | 40.432 | 324 | 170 | 8 | 3 | 312 | 4 | 318 | 1.19e-73 | 229 |
| Msa0713060 | MtrunA17_Chr4g0035121 | 39.677 | 310 | 180 | 3 | 1 | 308 | 1 | 305 | 5.07e-73 | 227 |
| Msa0713060 | MtrunA17_Chr3g0078901 | 42.020 | 307 | 167 | 6 | 3 | 308 | 5 | 301 | 5.61e-71 | 222 |
| Msa0713060 | MtrunA17_Chr3g0078831 | 38.762 | 307 | 177 | 6 | 3 | 308 | 5 | 301 | 7.38e-65 | 206 |
| Msa0713060 | MtrunA17_Chr1g0198771 | 35.127 | 316 | 193 | 6 | 1 | 312 | 11 | 318 | 1.19e-56 | 186 |
| Msa0713060 | MtrunA17_Chr3g0078941 | 38.806 | 201 | 118 | 4 | 108 | 308 | 12 | 207 | 9.31e-40 | 139 |
| Msa0713060 | MtrunA17_Chr3g0078951 | 41.818 | 110 | 55 | 3 | 2 | 110 | 4 | 105 | 1.02e-14 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0713060 | AT1G32100.1 | 65.916 | 311 | 105 | 1 | 2 | 312 | 8 | 317 | 7.98e-156 | 438 |
| Msa0713060 | AT4G13660.1 | 64.309 | 311 | 110 | 1 | 2 | 312 | 8 | 317 | 1.47e-152 | 430 |
| Msa0713060 | AT4G13660.2 | 64.309 | 311 | 110 | 1 | 2 | 312 | 8 | 317 | 1.47e-152 | 430 |
| Msa0713060 | AT1G75280.1 | 46.326 | 313 | 158 | 5 | 2 | 311 | 4 | 309 | 2.77e-89 | 269 |
| Msa0713060 | AT1G75290.1 | 45.048 | 313 | 163 | 4 | 2 | 311 | 4 | 310 | 2.22e-88 | 267 |
| Msa0713060 | AT4G39230.1 | 45.687 | 313 | 161 | 4 | 2 | 312 | 3 | 308 | 3.20e-88 | 266 |
| Msa0713060 | AT1G75290.2 | 45.048 | 313 | 163 | 4 | 2 | 311 | 31 | 337 | 8.89e-88 | 266 |
| Msa0713060 | AT1G75300.1 | 45.370 | 324 | 151 | 5 | 2 | 308 | 4 | 318 | 2.17e-82 | 252 |
| Msa0713060 | AT1G19540.1 | 44.551 | 312 | 166 | 4 | 4 | 312 | 3 | 310 | 1.46e-80 | 247 |
| Msa0713060 | AT1G19540.2 | 46.899 | 258 | 131 | 3 | 4 | 259 | 3 | 256 | 3.15e-70 | 219 |
| Msa0713060 | AT4G34540.1 | 39.935 | 308 | 173 | 4 | 2 | 308 | 6 | 302 | 4.75e-69 | 217 |
Find 89 sgRNAs with CRISPR-Local
Find 258 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTTTCTTGCCTTCGGAATT+TGG | 0.140897 | 5_1:+4947659 | Msa0713060:CDS |
| AAGGAGAGCTTATTGGAATT+TGG | 0.172480 | 5_1:+4948142 | Msa0713060:CDS |
| GGAATTTGGGAGAAACTTAT+TGG | 0.188551 | 5_1:+4948156 | Msa0713060:CDS |
| TGTTTGACAAACTTTGAAAT+AGG | 0.209168 | 5_1:+4948435 | Msa0713060:CDS |
| GCAGACACGCAGTTATAATT+TGG | 0.218419 | 5_1:+4948712 | Msa0713060:three_prime_UTR |
| TCATCAAATGTTACCCTTCC+TGG | 0.228852 | 5_1:-4947716 | None:intergenic |
| CTCTCCCAAGGAGAGCTTAT+TGG | 0.238246 | 5_1:+4948135 | Msa0713060:CDS |
| AAAAGCACAAAATCTCTTAA+AGG | 0.238987 | 5_1:-4948607 | None:intergenic |
| TCCATTATTTAATTAATCTA+AGG | 0.256130 | 5_1:-4946662 | None:intergenic |
| AGAGACAAGGTTCATCTCTT+TGG | 0.275371 | 5_1:+4947860 | Msa0713060:CDS |
| GTTTGACAAACTTTGAAATA+GGG | 0.285880 | 5_1:+4948436 | Msa0713060:CDS |
| AATATTACCAGCTTCTTTGA+TGG | 0.297662 | 5_1:-4947091 | None:intergenic |
| CAAAGAAGCTGGTAATATTA+AGG | 0.300858 | 5_1:+4947095 | Msa0713060:CDS |
| AATGCATGTCCCATTCTTGC+TGG | 0.305536 | 5_1:-4947689 | None:intergenic |
| AGGAGAGCTTATTGGAATTT+GGG | 0.315376 | 5_1:+4948143 | Msa0713060:CDS |
| CTATATCTGGTGTTCATATT+AGG | 0.315932 | 5_1:+4947031 | Msa0713060:CDS |
| GCCTTAGATTAATTAAATAA+TGG | 0.316956 | 5_1:+4946661 | Msa0713060:five_prime_UTR |
| CTCTTTGCTGGATACTTTGC+TGG | 0.318255 | 5_1:+4947803 | Msa0713060:CDS |
| CAAGTTCACAAATAAATAAA+AGG | 0.342389 | 5_1:+4946705 | Msa0713060:five_prime_UTR |
| TAGTTCAATTGGGAATAAAC+TGG | 0.349423 | 5_1:+4948629 | Msa0713060:three_prime_UTR |
| TTTGTCTTGGGTCTTTGGTT+TGG | 0.357317 | 5_1:-4946733 | None:intergenic |
| ATCTCTGCTAACCTCTTTGC+TGG | 0.361971 | 5_1:+4947791 | Msa0713060:CDS |
| GGTAACATTTGATGACAAAA+TGG | 0.366837 | 5_1:+4947724 | Msa0713060:CDS |
| TGCTGGAAGCCTCTCTCAGA+TGG | 0.390000 | 5_1:+4947820 | Msa0713060:CDS |
| ACACTAGCGTTTCTTGCCTT+CGG | 0.397251 | 5_1:+4947652 | Msa0713060:intron |
| CTTGGGTCTTTGGTTTGGAC+TGG | 0.402565 | 5_1:-4946728 | None:intergenic |
| TTTGGAGATGGAAAACATAA+AGG | 0.410931 | 5_1:+4947878 | Msa0713060:CDS |
| TATAAACTTCAAGTAGCAAT+TGG | 0.419438 | 5_1:+4948384 | Msa0713060:CDS |
| GTTCTAGTAGTGGGAGGAAC+AGG | 0.429745 | 5_1:+4946802 | Msa0713060:CDS |
| TGTTACCTTTCAATGTTGTA+AGG | 0.444547 | 5_1:-4948218 | None:intergenic |
| TGGCCTAGACCCAGCAAGAA+TGG | 0.445117 | 5_1:+4947679 | Msa0713060:CDS |
| CATATTAGGAGTCATAGTAT+TGG | 0.455402 | 5_1:+4947045 | Msa0713060:CDS |
| AGCAAGAATGGGACATGCAT+TGG | 0.455560 | 5_1:+4947691 | Msa0713060:CDS |
| CACAAAATCTCTTAAAGGTA+AGG | 0.456487 | 5_1:-4948602 | None:intergenic |
| GTCCCATTCTTGCTGGGTCT+AGG | 0.460549 | 5_1:-4947682 | None:intergenic |
| AACTTTGAAATAGGGGAAGA+TGG | 0.469119 | 5_1:+4948444 | Msa0713060:CDS |
| AAATTCCAATAAGCTCTCCT+TGG | 0.474182 | 5_1:-4948140 | None:intergenic |
| ATGCATGTCCCATTCTTGCT+GGG | 0.478003 | 5_1:-4947688 | None:intergenic |
| ATGCGTGTGTAATTCACCTC+AGG | 0.480231 | 5_1:-4948489 | None:intergenic |
| GTTGTCATCAGTGCTATATC+TGG | 0.487092 | 5_1:+4947018 | Msa0713060:CDS |
| TTCAAATTGAGAAGATTCAA+AGG | 0.491021 | 5_1:+4946905 | Msa0713060:CDS |
| TCAATTTGAAGTCCCAACTC+TGG | 0.493933 | 5_1:-4946892 | None:intergenic |
| TTGATGACAAAATGGCTGTA+AGG | 0.494907 | 5_1:+4947732 | Msa0713060:CDS |
| ATGGGACATGCATTGGAGCC+AGG | 0.496170 | 5_1:+4947698 | Msa0713060:CDS |
| GCTGGAAGCCTCTCTCAGAT+GGG | 0.496185 | 5_1:+4947821 | Msa0713060:CDS |
| CTTCTTTCATTCAAGAAACA+AGG | 0.497102 | 5_1:+4946928 | Msa0713060:CDS |
| GTGGGAGGAACAGGATACAT+AGG | 0.497938 | 5_1:+4946811 | Msa0713060:CDS |
| GGCCTAGACCCAGCAAGAAT+GGG | 0.499805 | 5_1:+4947680 | Msa0713060:CDS |
| AAGGTTCATCTCTTTGGAGA+TGG | 0.505407 | 5_1:+4947866 | Msa0713060:CDS |
| GAAACTTATTGGAAAAGAGC+TGG | 0.507171 | 5_1:+4948167 | Msa0713060:CDS |
| TTTGACAAACTTTGAAATAG+GGG | 0.526655 | 5_1:+4948437 | Msa0713060:CDS |
| TGTGATTCAAAGGCCAGAGT+TGG | 0.529026 | 5_1:+4946879 | Msa0713060:CDS |
| AAGAGCAAGGTTCTAGTAGT+GGG | 0.529398 | 5_1:+4946793 | Msa0713060:CDS |
| GTGATTCAAAGGCCAGAGTT+GGG | 0.530457 | 5_1:+4946880 | Msa0713060:CDS |
| GGCTTCCTTACAACATTGAA+AGG | 0.541729 | 5_1:+4948213 | Msa0713060:CDS |
| TCAAACACAGACATGTTGGT+TGG | 0.542642 | 5_1:+4948570 | Msa0713060:three_prime_UTR |
| AATACTTCCACGTGAGGTAG+TGG | 0.545465 | 5_1:+4948546 | Msa0713060:three_prime_UTR |
| ATGAAACCTATGTGATTCAA+AGG | 0.548412 | 5_1:+4946869 | Msa0713060:CDS |
| AAGAGATGAACCTTGTCTCT+AGG | 0.549631 | 5_1:-4947857 | None:intergenic |
| ATTCACCTCAGGGTAAAGCT+TGG | 0.558374 | 5_1:-4948478 | None:intergenic |
| AATTCCAATAAGCTCTCCTT+GGG | 0.559132 | 5_1:-4948139 | None:intergenic |
| AAAGAGCAAGGTTCTAGTAG+TGG | 0.560042 | 5_1:+4946792 | Msa0713060:CDS |
| GTTGATGCCATCAAAGAAGC+TGG | 0.562038 | 5_1:+4947084 | Msa0713060:CDS |
| TAAATAATGGATATTAAGAG+TGG | 0.563265 | 5_1:+4946674 | Msa0713060:five_prime_UTR |
| TTAGCAGAGATGTAAGTGAA+AGG | 0.563391 | 5_1:-4947779 | None:intergenic |
| GACATGCATTGGAGCCAGGA+AGG | 0.564748 | 5_1:+4947702 | Msa0713060:CDS |
| TCTTGTTGATGCTATCAAGA+AGG | 0.568801 | 5_1:+4946990 | Msa0713060:CDS |
| AATGTTGTAAGGAAGCCCTC+AGG | 0.573144 | 5_1:-4948207 | None:intergenic |
| AGAGAAAATGGAAAAGAGCA+AGG | 0.586777 | 5_1:+4946780 | Msa0713060:exon |
| TGAGGTGAATTACACACGCA+TGG | 0.597960 | 5_1:+4948491 | Msa0713060:CDS |
| CTCTGGCCTTTGAATCACAT+AGG | 0.599139 | 5_1:-4946875 | None:intergenic |
| TGCGTGTGTAATTCACCTCA+GGG | 0.611857 | 5_1:-4948488 | None:intergenic |
| CATAGGAAGAAGAATAGTGA+AGG | 0.614022 | 5_1:+4946828 | Msa0713060:CDS |
| ACATGCATTGGAGCCAGGAA+GGG | 0.617973 | 5_1:+4947703 | Msa0713060:CDS |
| CAAGAAAACATTCTCTCCCA+AGG | 0.620681 | 5_1:+4948123 | Msa0713060:CDS |
| CAGCAAAGTATCCAGCAAAG+AGG | 0.621117 | 5_1:-4947802 | None:intergenic |
| CAAAAGAACCCATCTGAGAG+AGG | 0.622907 | 5_1:-4947829 | None:intergenic |
| TGGTTCAAACACAGACATGT+TGG | 0.624528 | 5_1:+4948566 | Msa0713060:three_prime_UTR |
| AAATGAAATACTTCCACGTG+AGG | 0.644142 | 5_1:+4948540 | Msa0713060:three_prime_UTR |
| ACAAGGTGCTCATATTGTTG+AGG | 0.645307 | 5_1:+4946945 | Msa0713060:CDS |
| GGGTCTAGGCCAAATTCCGA+AGG | 0.645748 | 5_1:-4947668 | None:intergenic |
| GTGAAGGCAAGTTTAGAACA+AGG | 0.646091 | 5_1:+4946844 | Msa0713060:CDS |
| AGCAAGGTTCTAGTAGTGGG+AGG | 0.646523 | 5_1:+4946796 | Msa0713060:CDS |
| AAGACATACATTCCTCCTGA+GGG | 0.654898 | 5_1:+4948192 | Msa0713060:CDS |
| GTTTGAACCACTACCTCACG+TGG | 0.655274 | 5_1:-4948553 | None:intergenic |
| AGATGAACCTTGTCTCTAGG+AGG | 0.656944 | 5_1:-4947854 | None:intergenic |
| GTTGTAAGGAAGCCCTCAGG+AGG | 0.661067 | 5_1:-4948204 | None:intergenic |
| GAAGACATACATTCCTCCTG+AGG | 0.674555 | 5_1:+4948191 | Msa0713060:CDS |
| AGCATCCAAGCTTTACCCTG+AGG | 0.701976 | 5_1:+4948473 | Msa0713060:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTGTTTAATGTTAAAAATT+TGG | + | chr5_1:4947489-4947508 | Msa0713060:intron | 10.0% |
| !! | TTGTTTAATGTTAAAAATTT+GGG | + | chr5_1:4947490-4947509 | Msa0713060:intron | 10.0% |
| !!! | ATTTTTACACATAAATTTTT+AGG | - | chr5_1:4948524-4948543 | None:intergenic | 10.0% |
| !! | ATTGTTTAATGTTAAAAATT+TGG | + | chr5_1:4947489-4947508 | Msa0713060:intron | 10.0% |
| !! | TTGTTTAATGTTAAAAATTT+GGG | + | chr5_1:4947490-4947509 | Msa0713060:intron | 10.0% |
| !!! | ATTTTTACACATAAATTTTT+AGG | - | chr5_1:4948524-4948543 | None:intergenic | 10.0% |
| !! | TCCATTATTTAATTAATCTA+AGG | - | chr5_1:4946665-4946684 | None:intergenic | 15.0% |
| !! | TATTAAGGTAATTAATTTCT+TGG | + | chr5_1:4947110-4947129 | Msa0713060:intron | 15.0% |
| !! | AAAGATTAAGAAATTAAGAT+AGG | - | chr5_1:4947144-4947163 | None:intergenic | 15.0% |
| !!! | TAAAAGTTTTGAACTTATAA+AGG | - | chr5_1:4947906-4947925 | None:intergenic | 15.0% |
| !! | TCCATTATTTAATTAATCTA+AGG | - | chr5_1:4946665-4946684 | None:intergenic | 15.0% |
| !! | TATTAAGGTAATTAATTTCT+TGG | + | chr5_1:4947110-4947129 | Msa0713060:intron | 15.0% |
| !! | AAAGATTAAGAAATTAAGAT+AGG | - | chr5_1:4947144-4947163 | None:intergenic | 15.0% |
| !!! | TAAAAGTTTTGAACTTATAA+AGG | - | chr5_1:4947906-4947925 | None:intergenic | 15.0% |
| !! | GCCTTAGATTAATTAAATAA+TGG | + | chr5_1:4946661-4946680 | Msa0713060:five_prime_UTR | 20.0% |
| !!! | TAAATAATGGATATTAAGAG+TGG | + | chr5_1:4946674-4946693 | Msa0713060:five_prime_UTR | 20.0% |
| !! | CAAGTTCACAAATAAATAAA+AGG | + | chr5_1:4946705-4946724 | Msa0713060:five_prime_UTR | 20.0% |
| !! | GTATATAATTCATTTGAGAA+AGG | + | chr5_1:4947302-4947321 | Msa0713060:intron | 20.0% |
| !! | TTAATGACAATATATAGTTC+AGG | - | chr5_1:4947352-4947371 | None:intergenic | 20.0% |
| !! | TAAGTGAAAGACATTTATAT+TGG | + | chr5_1:4947458-4947477 | Msa0713060:intron | 20.0% |
| !! | ATTAGATATTAGATATGCAA+CGG | - | chr5_1:4947533-4947552 | None:intergenic | 20.0% |
| !! | TGTATGTAATTATGTCAAAT+TGG | - | chr5_1:4947591-4947610 | None:intergenic | 20.0% |
| !! | ATTTGACATAATTACATACA+TGG | + | chr5_1:4947591-4947610 | Msa0713060:intron | 20.0% |
| !!! | AAGGTATAATGTTTTGTTTA+AGG | - | chr5_1:4948097-4948116 | None:intergenic | 20.0% |
| !!! | TTCTATCATATTTTCTATGA+GGG | + | chr5_1:4948411-4948430 | Msa0713060:CDS | 20.0% |
| !! | GCCTTAGATTAATTAAATAA+TGG | + | chr5_1:4946661-4946680 | Msa0713060:five_prime_UTR | 20.0% |
| !!! | TAAATAATGGATATTAAGAG+TGG | + | chr5_1:4946674-4946693 | Msa0713060:five_prime_UTR | 20.0% |
| !! | CAAGTTCACAAATAAATAAA+AGG | + | chr5_1:4946705-4946724 | Msa0713060:five_prime_UTR | 20.0% |
| !! | GTATATAATTCATTTGAGAA+AGG | + | chr5_1:4947302-4947321 | Msa0713060:intron | 20.0% |
| !! | TTAATGACAATATATAGTTC+AGG | - | chr5_1:4947352-4947371 | None:intergenic | 20.0% |
| !! | TAAGTGAAAGACATTTATAT+TGG | + | chr5_1:4947458-4947477 | Msa0713060:intron | 20.0% |
| !! | ATTAGATATTAGATATGCAA+CGG | - | chr5_1:4947533-4947552 | None:intergenic | 20.0% |
| !! | TGTATGTAATTATGTCAAAT+TGG | - | chr5_1:4947591-4947610 | None:intergenic | 20.0% |
| !! | ATTTGACATAATTACATACA+TGG | + | chr5_1:4947591-4947610 | Msa0713060:intron | 20.0% |
| !!! | AAGGTATAATGTTTTGTTTA+AGG | - | chr5_1:4948097-4948116 | None:intergenic | 20.0% |
| !!! | TTCTATCATATTTTCTATGA+GGG | + | chr5_1:4948411-4948430 | Msa0713060:CDS | 20.0% |
| ! | TTCAAATTGAGAAGATTCAA+AGG | + | chr5_1:4946905-4946924 | Msa0713060:CDS | 25.0% |
| ! | TTATGTCAAATTGGAAAAAG+AGG | - | chr5_1:4947582-4947601 | None:intergenic | 25.0% |
| ! | TTACTTTCCTAATACATGTA+AGG | - | chr5_1:4948295-4948314 | None:intergenic | 25.0% |
| !!! | TTTATGTGAAATTGATTTGC+AGG | + | chr5_1:4948354-4948373 | Msa0713060:intron | 25.0% |
| ! | TATAAACTTCAAGTAGCAAT+TGG | + | chr5_1:4948384-4948403 | Msa0713060:CDS | 25.0% |
| !! | CTTCTATCATATTTTCTATG+AGG | + | chr5_1:4948410-4948429 | Msa0713060:CDS | 25.0% |
| !!! | TGTTTGACAAACTTTGAAAT+AGG | + | chr5_1:4948435-4948454 | Msa0713060:CDS | 25.0% |
| !!! | GTTTGACAAACTTTGAAATA+GGG | + | chr5_1:4948436-4948455 | Msa0713060:CDS | 25.0% |
| !!! | TTTGACAAACTTTGAAATAG+GGG | + | chr5_1:4948437-4948456 | Msa0713060:CDS | 25.0% |
| !! | AAAAGCACAAAATCTCTTAA+AGG | - | chr5_1:4948610-4948629 | None:intergenic | 25.0% |
| !!! | TTTTGTGCTTTTAGTTCAAT+TGG | + | chr5_1:4948618-4948637 | Msa0713060:three_prime_UTR | 25.0% |
| !!! | TTTGTGCTTTTAGTTCAATT+GGG | + | chr5_1:4948619-4948638 | Msa0713060:three_prime_UTR | 25.0% |
| ! | TTCAAATTGAGAAGATTCAA+AGG | + | chr5_1:4946905-4946924 | Msa0713060:CDS | 25.0% |
| ! | TTATGTCAAATTGGAAAAAG+AGG | - | chr5_1:4947582-4947601 | None:intergenic | 25.0% |
| ! | TTACTTTCCTAATACATGTA+AGG | - | chr5_1:4948295-4948314 | None:intergenic | 25.0% |
| !!! | TTTATGTGAAATTGATTTGC+AGG | + | chr5_1:4948354-4948373 | Msa0713060:intron | 25.0% |
| ! | TATAAACTTCAAGTAGCAAT+TGG | + | chr5_1:4948384-4948403 | Msa0713060:CDS | 25.0% |
| !! | CTTCTATCATATTTTCTATG+AGG | + | chr5_1:4948410-4948429 | Msa0713060:CDS | 25.0% |
| !!! | TGTTTGACAAACTTTGAAAT+AGG | + | chr5_1:4948435-4948454 | Msa0713060:CDS | 25.0% |
| !!! | GTTTGACAAACTTTGAAATA+GGG | + | chr5_1:4948436-4948455 | Msa0713060:CDS | 25.0% |
| !!! | TTTGACAAACTTTGAAATAG+GGG | + | chr5_1:4948437-4948456 | Msa0713060:CDS | 25.0% |
| !! | AAAAGCACAAAATCTCTTAA+AGG | - | chr5_1:4948610-4948629 | None:intergenic | 25.0% |
| !!! | TTTTGTGCTTTTAGTTCAAT+TGG | + | chr5_1:4948618-4948637 | Msa0713060:three_prime_UTR | 25.0% |
| !!! | TTTGTGCTTTTAGTTCAATT+GGG | + | chr5_1:4948619-4948638 | Msa0713060:three_prime_UTR | 25.0% |
| ! | TGCTTCAAATGTTTTGTCTT+GGG | - | chr5_1:4946748-4946767 | None:intergenic | 30.0% |
| CAGAAGAAAAAGAGAGAAAA+TGG | + | chr5_1:4946768-4946787 | Msa0713060:exon | 30.0% | |
| ATGAAACCTATGTGATTCAA+AGG | + | chr5_1:4946869-4946888 | Msa0713060:CDS | 30.0% | |
| CTTCTTTCATTCAAGAAACA+AGG | + | chr5_1:4946928-4946947 | Msa0713060:CDS | 30.0% | |
| CTATATCTGGTGTTCATATT+AGG | + | chr5_1:4947031-4947050 | Msa0713060:CDS | 30.0% | |
| CATATTAGGAGTCATAGTAT+TGG | + | chr5_1:4947045-4947064 | Msa0713060:CDS | 30.0% | |
| AATATTACCAGCTTCTTTGA+TGG | - | chr5_1:4947094-4947113 | None:intergenic | 30.0% | |
| CAAAGAAGCTGGTAATATTA+AGG | + | chr5_1:4947095-4947114 | Msa0713060:CDS | 30.0% | |
| TATACAGATTGTGATCGATT+TGG | - | chr5_1:4947287-4947306 | None:intergenic | 30.0% | |
| AAGCTAACCAATCATGTAAT+GGG | - | chr5_1:4947559-4947578 | None:intergenic | 30.0% | |
| ! | GGTAACATTTGATGACAAAA+TGG | + | chr5_1:4947724-4947743 | Msa0713060:CDS | 30.0% |
| TTTGGAGATGGAAAACATAA+AGG | + | chr5_1:4947878-4947897 | Msa0713060:CDS | 30.0% | |
| !!! | AATGTTTTGTTTAAGGTTCG+AGG | - | chr5_1:4948090-4948109 | None:intergenic | 30.0% |
| TGTTACCTTTCAATGTTGTA+AGG | - | chr5_1:4948221-4948240 | None:intergenic | 30.0% | |
| TTATGCACCTTACATGTATT+AGG | + | chr5_1:4948285-4948304 | Msa0713060:intron | 30.0% | |
| CAGTTAGTGTAAGTGATTTA+TGG | + | chr5_1:4948330-4948349 | Msa0713060:intron | 30.0% | |
| CACAAAATCTCTTAAAGGTA+AGG | - | chr5_1:4948605-4948624 | None:intergenic | 30.0% | |
| TAGTTCAATTGGGAATAAAC+TGG | + | chr5_1:4948629-4948648 | Msa0713060:three_prime_UTR | 30.0% | |
| ! | TGCTTCAAATGTTTTGTCTT+GGG | - | chr5_1:4946748-4946767 | None:intergenic | 30.0% |
| CAGAAGAAAAAGAGAGAAAA+TGG | + | chr5_1:4946768-4946787 | Msa0713060:exon | 30.0% | |
| ATGAAACCTATGTGATTCAA+AGG | + | chr5_1:4946869-4946888 | Msa0713060:CDS | 30.0% | |
| CTTCTTTCATTCAAGAAACA+AGG | + | chr5_1:4946928-4946947 | Msa0713060:CDS | 30.0% | |
| CTATATCTGGTGTTCATATT+AGG | + | chr5_1:4947031-4947050 | Msa0713060:CDS | 30.0% | |
| CATATTAGGAGTCATAGTAT+TGG | + | chr5_1:4947045-4947064 | Msa0713060:CDS | 30.0% | |
| AATATTACCAGCTTCTTTGA+TGG | - | chr5_1:4947094-4947113 | None:intergenic | 30.0% | |
| CAAAGAAGCTGGTAATATTA+AGG | + | chr5_1:4947095-4947114 | Msa0713060:CDS | 30.0% | |
| TATACAGATTGTGATCGATT+TGG | - | chr5_1:4947287-4947306 | None:intergenic | 30.0% | |
| AAGCTAACCAATCATGTAAT+GGG | - | chr5_1:4947559-4947578 | None:intergenic | 30.0% | |
| ! | GGTAACATTTGATGACAAAA+TGG | + | chr5_1:4947724-4947743 | Msa0713060:CDS | 30.0% |
| TTTGGAGATGGAAAACATAA+AGG | + | chr5_1:4947878-4947897 | Msa0713060:CDS | 30.0% | |
| !!! | AATGTTTTGTTTAAGGTTCG+AGG | - | chr5_1:4948090-4948109 | None:intergenic | 30.0% |
| TGTTACCTTTCAATGTTGTA+AGG | - | chr5_1:4948221-4948240 | None:intergenic | 30.0% | |
| TTATGCACCTTACATGTATT+AGG | + | chr5_1:4948285-4948304 | Msa0713060:intron | 30.0% | |
| CAGTTAGTGTAAGTGATTTA+TGG | + | chr5_1:4948330-4948349 | Msa0713060:intron | 30.0% | |
| CACAAAATCTCTTAAAGGTA+AGG | - | chr5_1:4948605-4948624 | None:intergenic | 30.0% | |
| TAGTTCAATTGGGAATAAAC+TGG | + | chr5_1:4948629-4948648 | Msa0713060:three_prime_UTR | 30.0% | |
| ! | AATGTTTTGTCTTGGGTCTT+TGG | - | chr5_1:4946741-4946760 | None:intergenic | 35.0% |
| ! | GTGCTTCAAATGTTTTGTCT+TGG | - | chr5_1:4946749-4946768 | None:intergenic | 35.0% |
| AGAGAAAATGGAAAAGAGCA+AGG | + | chr5_1:4946780-4946799 | Msa0713060:exon | 35.0% | |
| CATAGGAAGAAGAATAGTGA+AGG | + | chr5_1:4946828-4946847 | Msa0713060:CDS | 35.0% | |
| TCTTGTTGATGCTATCAAGA+AGG | + | chr5_1:4946990-4947009 | Msa0713060:CDS | 35.0% | |
| !! | TGTGATCGATTTGGTCTATA+TGG | - | chr5_1:4947278-4947297 | None:intergenic | 35.0% |
| TGCAACGGTATTCACATATT+GGG | - | chr5_1:4947518-4947537 | None:intergenic | 35.0% | |
| ATGCAACGGTATTCACATAT+TGG | - | chr5_1:4947519-4947538 | None:intergenic | 35.0% | |
| TAATGACCCCATTACATGAT+TGG | + | chr5_1:4947549-4947568 | Msa0713060:intron | 35.0% | |
| AGCTAACCAATCATGTAATG+GGG | - | chr5_1:4947558-4947577 | None:intergenic | 35.0% | |
| GAAGCTAACCAATCATGTAA+TGG | - | chr5_1:4947560-4947579 | None:intergenic | 35.0% | |
| ! | TTGATGACAAAATGGCTGTA+AGG | + | chr5_1:4947732-4947751 | Msa0713060:CDS | 35.0% |
| TTAGCAGAGATGTAAGTGAA+AGG | - | chr5_1:4947782-4947801 | None:intergenic | 35.0% | |
| ! | GAATGTTTTCTTGTGGTCTA+AGG | - | chr5_1:4948116-4948135 | None:intergenic | 35.0% |
| AATTCCAATAAGCTCTCCTT+GGG | - | chr5_1:4948142-4948161 | None:intergenic | 35.0% | |
| AAATTCCAATAAGCTCTCCT+TGG | - | chr5_1:4948143-4948162 | None:intergenic | 35.0% | |
| AAGGAGAGCTTATTGGAATT+TGG | + | chr5_1:4948142-4948161 | Msa0713060:CDS | 35.0% | |
| AGGAGAGCTTATTGGAATTT+GGG | + | chr5_1:4948143-4948162 | Msa0713060:CDS | 35.0% | |
| GGAATTTGGGAGAAACTTAT+TGG | + | chr5_1:4948156-4948175 | Msa0713060:CDS | 35.0% | |
| GAAACTTATTGGAAAAGAGC+TGG | + | chr5_1:4948167-4948186 | Msa0713060:CDS | 35.0% | |
| !! | GTGAAATTGATTTGCAGGAT+TGG | + | chr5_1:4948359-4948378 | Msa0713060:intron | 35.0% |
| !! | AACTTTGAAATAGGGGAAGA+TGG | + | chr5_1:4948444-4948463 | Msa0713060:CDS | 35.0% |
| AAATGAAATACTTCCACGTG+AGG | + | chr5_1:4948540-4948559 | Msa0713060:three_prime_UTR | 35.0% | |
| ! | AATGTTTTGTCTTGGGTCTT+TGG | - | chr5_1:4946741-4946760 | None:intergenic | 35.0% |
| ! | GTGCTTCAAATGTTTTGTCT+TGG | - | chr5_1:4946749-4946768 | None:intergenic | 35.0% |
| AGAGAAAATGGAAAAGAGCA+AGG | + | chr5_1:4946780-4946799 | Msa0713060:exon | 35.0% | |
| CATAGGAAGAAGAATAGTGA+AGG | + | chr5_1:4946828-4946847 | Msa0713060:CDS | 35.0% | |
| TCTTGTTGATGCTATCAAGA+AGG | + | chr5_1:4946990-4947009 | Msa0713060:CDS | 35.0% | |
| !! | TGTGATCGATTTGGTCTATA+TGG | - | chr5_1:4947278-4947297 | None:intergenic | 35.0% |
| TGCAACGGTATTCACATATT+GGG | - | chr5_1:4947518-4947537 | None:intergenic | 35.0% | |
| ATGCAACGGTATTCACATAT+TGG | - | chr5_1:4947519-4947538 | None:intergenic | 35.0% | |
| TAATGACCCCATTACATGAT+TGG | + | chr5_1:4947549-4947568 | Msa0713060:intron | 35.0% | |
| AGCTAACCAATCATGTAATG+GGG | - | chr5_1:4947558-4947577 | None:intergenic | 35.0% | |
| GAAGCTAACCAATCATGTAA+TGG | - | chr5_1:4947560-4947579 | None:intergenic | 35.0% | |
| ! | TTGATGACAAAATGGCTGTA+AGG | + | chr5_1:4947732-4947751 | Msa0713060:CDS | 35.0% |
| TTAGCAGAGATGTAAGTGAA+AGG | - | chr5_1:4947782-4947801 | None:intergenic | 35.0% | |
| ! | GAATGTTTTCTTGTGGTCTA+AGG | - | chr5_1:4948116-4948135 | None:intergenic | 35.0% |
| AATTCCAATAAGCTCTCCTT+GGG | - | chr5_1:4948142-4948161 | None:intergenic | 35.0% | |
| AAATTCCAATAAGCTCTCCT+TGG | - | chr5_1:4948143-4948162 | None:intergenic | 35.0% | |
| AAGGAGAGCTTATTGGAATT+TGG | + | chr5_1:4948142-4948161 | Msa0713060:CDS | 35.0% | |
| AGGAGAGCTTATTGGAATTT+GGG | + | chr5_1:4948143-4948162 | Msa0713060:CDS | 35.0% | |
| GGAATTTGGGAGAAACTTAT+TGG | + | chr5_1:4948156-4948175 | Msa0713060:CDS | 35.0% | |
| GAAACTTATTGGAAAAGAGC+TGG | + | chr5_1:4948167-4948186 | Msa0713060:CDS | 35.0% | |
| !! | GTGAAATTGATTTGCAGGAT+TGG | + | chr5_1:4948359-4948378 | Msa0713060:intron | 35.0% |
| !! | AACTTTGAAATAGGGGAAGA+TGG | + | chr5_1:4948444-4948463 | Msa0713060:CDS | 35.0% |
| AAATGAAATACTTCCACGTG+AGG | + | chr5_1:4948540-4948559 | Msa0713060:three_prime_UTR | 35.0% | |
| TTTGTCTTGGGTCTTTGGTT+TGG | - | chr5_1:4946736-4946755 | None:intergenic | 40.0% | |
| ! | AAAGAGCAAGGTTCTAGTAG+TGG | + | chr5_1:4946792-4946811 | Msa0713060:CDS | 40.0% |
| ! | AAGAGCAAGGTTCTAGTAGT+GGG | + | chr5_1:4946793-4946812 | Msa0713060:CDS | 40.0% |
| ! | GTGAAGGCAAGTTTAGAACA+AGG | + | chr5_1:4946844-4946863 | Msa0713060:CDS | 40.0% |
| ! | TCAATTTGAAGTCCCAACTC+TGG | - | chr5_1:4946895-4946914 | None:intergenic | 40.0% |
| ! | ACAAGGTGCTCATATTGTTG+AGG | + | chr5_1:4946945-4946964 | Msa0713060:CDS | 40.0% |
| GTTGTCATCAGTGCTATATC+TGG | + | chr5_1:4947018-4947037 | Msa0713060:CDS | 40.0% | |
| !! | CGATTTGGTCTATATGGTTC+AGG | - | chr5_1:4947272-4947291 | None:intergenic | 40.0% |
| TCATCAAATGTTACCCTTCC+TGG | - | chr5_1:4947719-4947738 | None:intergenic | 40.0% | |
| AAGAGATGAACCTTGTCTCT+AGG | - | chr5_1:4947860-4947879 | None:intergenic | 40.0% | |
| AGAGACAAGGTTCATCTCTT+TGG | + | chr5_1:4947860-4947879 | Msa0713060:CDS | 40.0% | |
| ! | AAGGTTCATCTCTTTGGAGA+TGG | + | chr5_1:4947866-4947885 | Msa0713060:CDS | 40.0% |
| ! | TGGGAGAGAATGTTTTCTTG+TGG | - | chr5_1:4948123-4948142 | None:intergenic | 40.0% |
| CAAGAAAACATTCTCTCCCA+AGG | + | chr5_1:4948123-4948142 | Msa0713060:CDS | 40.0% | |
| AAGACATACATTCCTCCTGA+GGG | + | chr5_1:4948192-4948211 | Msa0713060:CDS | 40.0% | |
| GGCTTCCTTACAACATTGAA+AGG | + | chr5_1:4948213-4948232 | Msa0713060:CDS | 40.0% | |
| TGGTTCAAACACAGACATGT+TGG | + | chr5_1:4948566-4948585 | Msa0713060:three_prime_UTR | 40.0% | |
| TCAAACACAGACATGTTGGT+TGG | + | chr5_1:4948570-4948589 | Msa0713060:three_prime_UTR | 40.0% | |
| GCAGACACGCAGTTATAATT+TGG | + | chr5_1:4948712-4948731 | Msa0713060:three_prime_UTR | 40.0% | |
| TTTGTCTTGGGTCTTTGGTT+TGG | - | chr5_1:4946736-4946755 | None:intergenic | 40.0% | |
| ! | AAAGAGCAAGGTTCTAGTAG+TGG | + | chr5_1:4946792-4946811 | Msa0713060:CDS | 40.0% |
| ! | AAGAGCAAGGTTCTAGTAGT+GGG | + | chr5_1:4946793-4946812 | Msa0713060:CDS | 40.0% |
| ! | GTGAAGGCAAGTTTAGAACA+AGG | + | chr5_1:4946844-4946863 | Msa0713060:CDS | 40.0% |
| ! | TCAATTTGAAGTCCCAACTC+TGG | - | chr5_1:4946895-4946914 | None:intergenic | 40.0% |
| ! | ACAAGGTGCTCATATTGTTG+AGG | + | chr5_1:4946945-4946964 | Msa0713060:CDS | 40.0% |
| GTTGTCATCAGTGCTATATC+TGG | + | chr5_1:4947018-4947037 | Msa0713060:CDS | 40.0% | |
| !! | CGATTTGGTCTATATGGTTC+AGG | - | chr5_1:4947272-4947291 | None:intergenic | 40.0% |
| TCATCAAATGTTACCCTTCC+TGG | - | chr5_1:4947719-4947738 | None:intergenic | 40.0% | |
| AAGAGATGAACCTTGTCTCT+AGG | - | chr5_1:4947860-4947879 | None:intergenic | 40.0% | |
| AGAGACAAGGTTCATCTCTT+TGG | + | chr5_1:4947860-4947879 | Msa0713060:CDS | 40.0% | |
| ! | AAGGTTCATCTCTTTGGAGA+TGG | + | chr5_1:4947866-4947885 | Msa0713060:CDS | 40.0% |
| ! | TGGGAGAGAATGTTTTCTTG+TGG | - | chr5_1:4948123-4948142 | None:intergenic | 40.0% |
| CAAGAAAACATTCTCTCCCA+AGG | + | chr5_1:4948123-4948142 | Msa0713060:CDS | 40.0% | |
| AAGACATACATTCCTCCTGA+GGG | + | chr5_1:4948192-4948211 | Msa0713060:CDS | 40.0% | |
| GGCTTCCTTACAACATTGAA+AGG | + | chr5_1:4948213-4948232 | Msa0713060:CDS | 40.0% | |
| TGGTTCAAACACAGACATGT+TGG | + | chr5_1:4948566-4948585 | Msa0713060:three_prime_UTR | 40.0% | |
| TCAAACACAGACATGTTGGT+TGG | + | chr5_1:4948570-4948589 | Msa0713060:three_prime_UTR | 40.0% | |
| GCAGACACGCAGTTATAATT+TGG | + | chr5_1:4948712-4948731 | Msa0713060:three_prime_UTR | 40.0% | |
| ! | CTCTGGCCTTTGAATCACAT+AGG | - | chr5_1:4946878-4946897 | None:intergenic | 45.0% |
| TGTGATTCAAAGGCCAGAGT+TGG | + | chr5_1:4946879-4946898 | Msa0713060:CDS | 45.0% | |
| GTGATTCAAAGGCCAGAGTT+GGG | + | chr5_1:4946880-4946899 | Msa0713060:CDS | 45.0% | |
| GTTGATGCCATCAAAGAAGC+TGG | + | chr5_1:4947084-4947103 | Msa0713060:CDS | 45.0% | |
| ACACTAGCGTTTCTTGCCTT+CGG | + | chr5_1:4947652-4947671 | Msa0713060:intron | 45.0% | |
| CGTTTCTTGCCTTCGGAATT+TGG | + | chr5_1:4947659-4947678 | Msa0713060:CDS | 45.0% | |
| ATGCATGTCCCATTCTTGCT+GGG | - | chr5_1:4947691-4947710 | None:intergenic | 45.0% | |
| AATGCATGTCCCATTCTTGC+TGG | - | chr5_1:4947692-4947711 | None:intergenic | 45.0% | |
| AGCAAGAATGGGACATGCAT+TGG | + | chr5_1:4947691-4947710 | Msa0713060:CDS | 45.0% | |
| ATCTCTGCTAACCTCTTTGC+TGG | + | chr5_1:4947791-4947810 | Msa0713060:CDS | 45.0% | |
| ! | CAGCAAAGTATCCAGCAAAG+AGG | - | chr5_1:4947805-4947824 | None:intergenic | 45.0% |
| CTCTTTGCTGGATACTTTGC+TGG | + | chr5_1:4947803-4947822 | Msa0713060:CDS | 45.0% | |
| CAAAAGAACCCATCTGAGAG+AGG | - | chr5_1:4947832-4947851 | None:intergenic | 45.0% | |
| ! | TTTTGTGCCTCCTAGAGACA+AGG | + | chr5_1:4947847-4947866 | Msa0713060:CDS | 45.0% |
| AGATGAACCTTGTCTCTAGG+AGG | - | chr5_1:4947857-4947876 | None:intergenic | 45.0% | |
| GAAGACATACATTCCTCCTG+AGG | + | chr5_1:4948191-4948210 | Msa0713060:CDS | 45.0% | |
| AATGTTGTAAGGAAGCCCTC+AGG | - | chr5_1:4948210-4948229 | None:intergenic | 45.0% | |
| ATTCACCTCAGGGTAAAGCT+TGG | - | chr5_1:4948481-4948500 | None:intergenic | 45.0% | |
| TGCGTGTGTAATTCACCTCA+GGG | - | chr5_1:4948491-4948510 | None:intergenic | 45.0% | |
| ATGCGTGTGTAATTCACCTC+AGG | - | chr5_1:4948492-4948511 | None:intergenic | 45.0% | |
| TGAGGTGAATTACACACGCA+TGG | + | chr5_1:4948491-4948510 | Msa0713060:CDS | 45.0% | |
| AATACTTCCACGTGAGGTAG+TGG | + | chr5_1:4948546-4948565 | Msa0713060:three_prime_UTR | 45.0% | |
| ! | CTCTGGCCTTTGAATCACAT+AGG | - | chr5_1:4946878-4946897 | None:intergenic | 45.0% |
| TGTGATTCAAAGGCCAGAGT+TGG | + | chr5_1:4946879-4946898 | Msa0713060:CDS | 45.0% | |
| GTGATTCAAAGGCCAGAGTT+GGG | + | chr5_1:4946880-4946899 | Msa0713060:CDS | 45.0% | |
| GTTGATGCCATCAAAGAAGC+TGG | + | chr5_1:4947084-4947103 | Msa0713060:CDS | 45.0% | |
| ACACTAGCGTTTCTTGCCTT+CGG | + | chr5_1:4947652-4947671 | Msa0713060:intron | 45.0% | |
| CGTTTCTTGCCTTCGGAATT+TGG | + | chr5_1:4947659-4947678 | Msa0713060:CDS | 45.0% | |
| ATGCATGTCCCATTCTTGCT+GGG | - | chr5_1:4947691-4947710 | None:intergenic | 45.0% | |
| AATGCATGTCCCATTCTTGC+TGG | - | chr5_1:4947692-4947711 | None:intergenic | 45.0% | |
| AGCAAGAATGGGACATGCAT+TGG | + | chr5_1:4947691-4947710 | Msa0713060:CDS | 45.0% | |
| ATCTCTGCTAACCTCTTTGC+TGG | + | chr5_1:4947791-4947810 | Msa0713060:CDS | 45.0% | |
| ! | CAGCAAAGTATCCAGCAAAG+AGG | - | chr5_1:4947805-4947824 | None:intergenic | 45.0% |
| CTCTTTGCTGGATACTTTGC+TGG | + | chr5_1:4947803-4947822 | Msa0713060:CDS | 45.0% | |
| CAAAAGAACCCATCTGAGAG+AGG | - | chr5_1:4947832-4947851 | None:intergenic | 45.0% | |
| ! | TTTTGTGCCTCCTAGAGACA+AGG | + | chr5_1:4947847-4947866 | Msa0713060:CDS | 45.0% |
| AGATGAACCTTGTCTCTAGG+AGG | - | chr5_1:4947857-4947876 | None:intergenic | 45.0% | |
| GAAGACATACATTCCTCCTG+AGG | + | chr5_1:4948191-4948210 | Msa0713060:CDS | 45.0% | |
| AATGTTGTAAGGAAGCCCTC+AGG | - | chr5_1:4948210-4948229 | None:intergenic | 45.0% | |
| ATTCACCTCAGGGTAAAGCT+TGG | - | chr5_1:4948481-4948500 | None:intergenic | 45.0% | |
| TGCGTGTGTAATTCACCTCA+GGG | - | chr5_1:4948491-4948510 | None:intergenic | 45.0% | |
| ATGCGTGTGTAATTCACCTC+AGG | - | chr5_1:4948492-4948511 | None:intergenic | 45.0% | |
| TGAGGTGAATTACACACGCA+TGG | + | chr5_1:4948491-4948510 | Msa0713060:CDS | 45.0% | |
| AATACTTCCACGTGAGGTAG+TGG | + | chr5_1:4948546-4948565 | Msa0713060:three_prime_UTR | 45.0% | |
| !! | CTTGGGTCTTTGGTTTGGAC+TGG | - | chr5_1:4946731-4946750 | None:intergenic | 50.0% |
| ! | AGCAAGGTTCTAGTAGTGGG+AGG | + | chr5_1:4946796-4946815 | Msa0713060:CDS | 50.0% |
| ! | GTTCTAGTAGTGGGAGGAAC+AGG | + | chr5_1:4946802-4946821 | Msa0713060:CDS | 50.0% |
| GTGGGAGGAACAGGATACAT+AGG | + | chr5_1:4946811-4946830 | Msa0713060:CDS | 50.0% | |
| ACATGCATTGGAGCCAGGAA+GGG | + | chr5_1:4947703-4947722 | Msa0713060:CDS | 50.0% | |
| CTCTCCCAAGGAGAGCTTAT+TGG | + | chr5_1:4948135-4948154 | Msa0713060:CDS | 50.0% | |
| AGCATCCAAGCTTTACCCTG+AGG | + | chr5_1:4948473-4948492 | Msa0713060:CDS | 50.0% | |
| GTTTGAACCACTACCTCACG+TGG | - | chr5_1:4948556-4948575 | None:intergenic | 50.0% | |
| !! | CTTGGGTCTTTGGTTTGGAC+TGG | - | chr5_1:4946731-4946750 | None:intergenic | 50.0% |
| ! | AGCAAGGTTCTAGTAGTGGG+AGG | + | chr5_1:4946796-4946815 | Msa0713060:CDS | 50.0% |
| ! | GTTCTAGTAGTGGGAGGAAC+AGG | + | chr5_1:4946802-4946821 | Msa0713060:CDS | 50.0% |
| GTGGGAGGAACAGGATACAT+AGG | + | chr5_1:4946811-4946830 | Msa0713060:CDS | 50.0% | |
| ACATGCATTGGAGCCAGGAA+GGG | + | chr5_1:4947703-4947722 | Msa0713060:CDS | 50.0% | |
| CTCTCCCAAGGAGAGCTTAT+TGG | + | chr5_1:4948135-4948154 | Msa0713060:CDS | 50.0% | |
| AGCATCCAAGCTTTACCCTG+AGG | + | chr5_1:4948473-4948492 | Msa0713060:CDS | 50.0% | |
| GTTTGAACCACTACCTCACG+TGG | - | chr5_1:4948556-4948575 | None:intergenic | 50.0% | |
| GGGTCTAGGCCAAATTCCGA+AGG | - | chr5_1:4947671-4947690 | None:intergenic | 55.0% | |
| TGGCCTAGACCCAGCAAGAA+TGG | + | chr5_1:4947679-4947698 | Msa0713060:CDS | 55.0% | |
| GGCCTAGACCCAGCAAGAAT+GGG | + | chr5_1:4947680-4947699 | Msa0713060:CDS | 55.0% | |
| GTCCCATTCTTGCTGGGTCT+AGG | - | chr5_1:4947685-4947704 | None:intergenic | 55.0% | |
| ATGGGACATGCATTGGAGCC+AGG | + | chr5_1:4947698-4947717 | Msa0713060:CDS | 55.0% | |
| GACATGCATTGGAGCCAGGA+AGG | + | chr5_1:4947702-4947721 | Msa0713060:CDS | 55.0% | |
| TGCTGGAAGCCTCTCTCAGA+TGG | + | chr5_1:4947820-4947839 | Msa0713060:CDS | 55.0% | |
| GCTGGAAGCCTCTCTCAGAT+GGG | + | chr5_1:4947821-4947840 | Msa0713060:CDS | 55.0% | |
| GTTGTAAGGAAGCCCTCAGG+AGG | - | chr5_1:4948207-4948226 | None:intergenic | 55.0% | |
| GGGTCTAGGCCAAATTCCGA+AGG | - | chr5_1:4947671-4947690 | None:intergenic | 55.0% | |
| TGGCCTAGACCCAGCAAGAA+TGG | + | chr5_1:4947679-4947698 | Msa0713060:CDS | 55.0% | |
| GGCCTAGACCCAGCAAGAAT+GGG | + | chr5_1:4947680-4947699 | Msa0713060:CDS | 55.0% | |
| GTCCCATTCTTGCTGGGTCT+AGG | - | chr5_1:4947685-4947704 | None:intergenic | 55.0% | |
| ATGGGACATGCATTGGAGCC+AGG | + | chr5_1:4947698-4947717 | Msa0713060:CDS | 55.0% | |
| GACATGCATTGGAGCCAGGA+AGG | + | chr5_1:4947702-4947721 | Msa0713060:CDS | 55.0% | |
| TGCTGGAAGCCTCTCTCAGA+TGG | + | chr5_1:4947820-4947839 | Msa0713060:CDS | 55.0% | |
| GCTGGAAGCCTCTCTCAGAT+GGG | + | chr5_1:4947821-4947840 | Msa0713060:CDS | 55.0% | |
| GTTGTAAGGAAGCCCTCAGG+AGG | - | chr5_1:4948207-4948226 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 4946648 | 4948748 | 4946648 | ID=Msa0713060;Name=Msa0713060 |
| chr5_1 | mRNA | 4946648 | 4948748 | 4946648 | ID=Msa0713060-mRNA-1;Parent=Msa0713060;Name=Msa0713060-mRNA-1;_AED=0.07;_eAED=0.07;_QI=139|1|1|1|1|1|4|209|312 |
| chr5_1 | exon | 4946648 | 4947116 | 4946648 | ID=Msa0713060-mRNA-1:exon:2056;Parent=Msa0713060-mRNA-1 |
| chr5_1 | exon | 4947659 | 4947899 | 4947659 | ID=Msa0713060-mRNA-1:exon:2057;Parent=Msa0713060-mRNA-1 |
| chr5_1 | exon | 4948031 | 4948234 | 4948031 | ID=Msa0713060-mRNA-1:exon:2058;Parent=Msa0713060-mRNA-1 |
| chr5_1 | exon | 4948376 | 4948748 | 4948376 | ID=Msa0713060-mRNA-1:exon:2059;Parent=Msa0713060-mRNA-1 |
| chr5_1 | five_prime_UTR | 4946648 | 4946786 | 4946648 | ID=Msa0713060-mRNA-1:five_prime_utr;Parent=Msa0713060-mRNA-1 |
| chr5_1 | CDS | 4946787 | 4947116 | 4946787 | ID=Msa0713060-mRNA-1:cds;Parent=Msa0713060-mRNA-1 |
| chr5_1 | CDS | 4947659 | 4947899 | 4947659 | ID=Msa0713060-mRNA-1:cds;Parent=Msa0713060-mRNA-1 |
| chr5_1 | CDS | 4948031 | 4948234 | 4948031 | ID=Msa0713060-mRNA-1:cds;Parent=Msa0713060-mRNA-1 |
| chr5_1 | CDS | 4948376 | 4948539 | 4948376 | ID=Msa0713060-mRNA-1:cds;Parent=Msa0713060-mRNA-1 |
| chr5_1 | three_prime_UTR | 4948540 | 4948748 | 4948540 | ID=Msa0713060-mRNA-1:three_prime_utr;Parent=Msa0713060-mRNA-1 |
| Gene Sequence |
| Protein sequence |
