AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0114790

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0114790 MtrunA17_Chr2g0312321 99.349 307 1 1 1 307 1 306 0.0 640
Msa0114790 MtrunA17_Chr4g0060931 44.558 294 127 11 1 262 1 290 1.66e-67 214
Msa0114790 MtrunA17_Chr1g0183741 47.280 239 106 5 7 241 6 228 1.77e-67 212
Msa0114790 MtrunA17_Chr6g0484441 47.982 223 108 4 7 226 1 218 2.38e-67 213
Msa0114790 MtrunA17_Chr7g0261411 63.226 155 48 3 7 157 6 155 3.35e-67 211
Msa0114790 MtrunA17_Chr6g0453451 51.724 203 93 3 10 208 19 220 3.07e-65 207
Msa0114790 MtrunA17_Chr7g0253011 55.276 199 70 7 11 192 17 213 6.33e-65 209
Msa0114790 MtrunA17_Chr2g0316971 62.420 157 54 3 8 159 20 176 1.25e-62 202
Msa0114790 MtrunA17_Chr6g0461661 53.723 188 75 5 11 186 18 205 1.49e-61 200
Msa0114790 MtrunA17_Chr3g0091921 51.741 201 81 5 1 187 1 199 1.75e-61 197
Msa0114790 MtrunA17_Chr1g0147421 57.229 166 63 3 8 168 24 186 2.29e-61 199
Msa0114790 MtrunA17_Chr3g0139331 58.333 156 56 4 8 158 8 159 5.49e-59 192
Msa0114790 MtrunA17_Chr2g0309891 56.098 164 68 2 6 165 1 164 6.68e-57 187
Msa0114790 MtrunA17_Chr1g0200561 53.797 158 63 4 7 158 15 168 1.20e-55 184
Msa0114790 MtrunA17_Chr4g0018391 55.128 156 60 4 9 158 5 156 1.21e-55 184
Msa0114790 MtrunA17_Chr4g0056541 54.321 162 66 3 9 165 5 163 7.72e-55 182
Msa0114790 MtrunA17_Chr5g0398971 42.570 249 123 9 1 237 1 241 6.36e-54 179
Msa0114790 MtrunA17_Chr5g0405211 52.532 158 65 4 7 158 4 157 9.86e-54 179
Msa0114790 MtrunA17_Chr8g0372121 49.697 165 75 3 6 165 1 162 1.61e-53 177
Msa0114790 MtrunA17_Chr3g0144271 58.273 139 53 2 8 141 20 158 3.72e-53 179
Msa0114790 MtrunA17_Chr4g0017921 52.500 160 67 3 4 158 1 156 6.23e-53 177
Msa0114790 MtrunA17_Chr7g0217721 42.424 231 109 7 8 217 16 243 1.22e-52 176
Msa0114790 MtrunA17_Chr8g0346001 48.824 170 74 4 8 164 12 181 5.10e-52 176
Msa0114790 MtrunA17_Chr8g0359921 35.093 322 174 8 6 301 9 321 7.70e-52 173
Msa0114790 MtrunA17_Chr3g0109821 51.744 172 76 3 6 173 1 169 5.60e-51 178
Msa0114790 MtrunA17_Chr7g0252971 46.199 171 78 3 8 164 5 175 8.33e-51 171
Msa0114790 MtrunA17_Chr2g0309331 50.955 157 68 4 8 158 7 160 1.44e-50 170
Msa0114790 MtrunA17_Chr2g0318081 49.398 166 74 4 6 166 11 171 4.50e-50 169
Msa0114790 MtrunA17_Chr7g0217711 57.576 132 52 2 8 136 16 146 1.35e-49 162
Msa0114790 MtrunA17_Chr5g0417791 49.351 154 73 3 10 158 2 155 1.98e-49 165
Msa0114790 MtrunA17_Chr6g0481091 47.953 171 84 3 6 172 1 170 2.75e-49 164
Msa0114790 MtrunA17_Chr7g0263931 51.572 159 62 4 8 155 8 162 3.39e-49 166
Msa0114790 MtrunA17_Chr5g0433781 48.087 183 87 4 6 184 1 179 1.37e-48 171
Msa0114790 MtrunA17_Chr3g0124761 40.476 252 116 7 8 227 4 253 1.79e-48 163
Msa0114790 MtrunA17_Chr4g0042561 47.799 159 78 3 5 158 3 161 2.24e-48 162
Msa0114790 MtrunA17_Chr2g0318101 48.485 165 71 4 8 158 12 176 4.03e-48 164
Msa0114790 MtrunA17_Chr8g0384721 41.048 229 112 7 10 225 6 224 4.37e-48 162
Msa0114790 MtrunA17_Chr7g0214071 46.196 184 74 6 8 175 12 186 1.57e-47 160
Msa0114790 MtrunA17_Chr4g0047841 43.979 191 81 4 11 175 15 205 2.04e-47 162
Msa0114790 MtrunA17_Chr6g0453131 49.390 164 72 4 11 163 15 178 1.56e-46 161
Msa0114790 MtrunA17_Chr2g0326361 48.026 152 72 3 11 155 14 165 1.55e-45 157
Msa0114790 MtrunA17_Chr8g0361731 46.199 171 80 4 7 165 10 180 1.11e-44 156
Msa0114790 MtrunA17_Chr3g0130731 50.314 159 74 4 8 162 4 161 1.31e-44 153
Msa0114790 MtrunA17_Chr5g0428991 49.689 161 66 4 10 161 24 178 9.42e-44 158
Msa0114790 MtrunA17_Chr5g0417001 45.087 173 84 4 7 168 10 182 9.97e-44 154
Msa0114790 MtrunA17_Chr3g0128151 48.750 160 67 4 11 161 22 175 1.47e-42 154
Msa0114790 MtrunA17_Chr2g0311661 36.508 252 130 7 13 234 23 274 2.14e-42 147
Msa0114790 MtrunA17_Chr5g0400461 47.024 168 74 4 6 162 1 164 4.41e-42 148
Msa0114790 MtrunA17_Chr3g0130101 49.383 162 68 6 6 158 1 157 6.67e-42 148
Msa0114790 MtrunA17_Chr3g0092671 48.701 154 68 4 13 159 7 156 2.81e-41 150
Msa0114790 MtrunA17_Chr2g0311651 38.174 241 109 8 13 225 24 252 3.27e-41 145
Msa0114790 MtrunA17_Chr4g0076731 38.306 248 130 7 13 251 56 289 3.51e-41 148
Msa0114790 MtrunA17_Chr4g0054791 47.953 171 74 6 6 164 1 168 1.20e-40 144
Msa0114790 MtrunA17_Chr5g0442771 40.094 212 93 6 13 195 20 226 1.27e-40 143
Msa0114790 MtrunA17_Chr1g0197351 47.826 161 69 4 11 159 42 199 4.92e-40 145
Msa0114790 MtrunA17_Chr3g0128111 40.000 200 104 7 14 204 45 237 6.90e-40 140
Msa0114790 MtrunA17_Chr1g0197361 47.712 153 71 4 13 159 10 159 1.92e-39 145
Msa0114790 MtrunA17_Chr8g0364791 43.671 158 82 4 6 158 1 156 1.05e-37 139
Msa0114790 MtrunA17_Chr3g0113001 44.509 173 70 5 58 217 14 173 2.15e-37 135
Msa0114790 MtrunA17_Chr8g0384201 42.767 159 82 4 6 158 1 156 1.16e-36 137
Msa0114790 MtrunA17_Chr4g0038751 43.373 166 78 5 1 158 4 161 1.54e-36 132
Msa0114790 MtrunA17_Chr1g0201021 51.181 127 58 3 13 135 21 147 2.79e-36 137
Msa0114790 MtrunA17_Chr8g0345671 45.395 152 69 5 11 155 11 155 1.03e-34 130
Msa0114790 MtrunA17_Chr3g0131911 39.877 163 85 5 9 160 12 172 4.94e-33 122
Msa0114790 MtrunA17_Chr8g0385991 38.125 160 89 5 9 160 12 169 1.46e-32 120
Msa0114790 MtrunA17_Chr8g0345691 43.421 152 72 5 11 155 12 156 3.13e-32 123
Msa0114790 MtrunA17_Chr2g0321631 41.509 159 76 7 12 156 5 160 1.73e-31 118
Msa0114790 MtrunA17_Chr3g0113031 44.304 158 65 4 72 217 3 149 1.10e-30 116
Msa0114790 MtrunA17_Chr4g0026141 38.650 163 84 6 7 156 1 160 1.38e-30 115
Msa0114790 MtrunA17_Chr2g0321741 42.276 123 61 3 35 155 17 131 2.05e-27 109
Msa0114790 MtrunA17_Chr8g0345711 39.568 139 76 4 2 133 3 140 4.96e-27 103
Msa0114790 MtrunA17_Chr4g0050701 33.690 187 103 5 1 176 1 177 1.33e-26 103
Msa0114790 MtrunA17_Chr8g0345701 41.667 144 60 6 11 133 7 147 1.13e-24 97.8
Msa0114790 MtrunA17_Chr7g0266701 31.792 173 102 5 11 167 4 176 3.68e-24 98.6
Msa0114790 MtrunA17_Chr7g0243371 46.512 86 44 1 63 146 18 103 2.20e-22 90.1
Msa0114790 MtrunA17_Chr8g0384351 35.882 170 82 8 9 175 8 153 6.86e-22 90.9
Msa0114790 MtrunA17_Chr8g0345731 39.850 133 69 6 11 133 24 155 1.71e-21 89.4
Msa0114790 MtrunA17_Chr8g0345721 34.194 155 65 5 14 132 38 191 5.78e-21 89.0
Msa0114790 MtrunA17_Chr8g0345741 38.655 119 65 4 22 133 2 119 8.99e-21 87.0
Msa0114790 MtrunA17_Chr3g0130321 31.217 189 101 7 9 178 5 183 5.73e-20 86.3
Msa0114790 MtrunA17_Chr7g0251651 27.684 177 122 4 10 182 17 191 1.89e-15 73.6
Msa0114790 MtrunA17_Chr7g0251661 27.703 148 99 5 4 146 3 147 4.15e-14 68.9
Msa0114790 MtrunA17_Chr7g0251671 27.632 152 94 5 4 146 3 147 1.39e-13 67.4
Msa0114790 MtrunA17_Chr3g0113011 59.184 49 16 2 10 55 18 65 1.18e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0114790 AT1G56010.2 60.248 322 102 10 2 305 10 323 2.86e-127 366
Msa0114790 AT3G12977.1 54.839 310 92 11 3 305 10 278 4.66e-104 305
Msa0114790 AT1G56010.1 58.712 264 84 10 58 305 2 256 7.97e-94 279
Msa0114790 AT3G12977.2 48.571 280 85 11 30 305 1 225 6.03e-72 222
Msa0114790 AT5G61430.1 51.464 239 94 7 11 232 16 249 4.22e-69 218
Msa0114790 AT3G18400.1 62.987 154 53 2 7 158 1 152 4.34e-68 215
Msa0114790 AT5G07680.2 44.850 301 136 8 11 298 3 286 2.23e-66 211
Msa0114790 AT5G07680.1 44.850 301 136 8 11 298 17 300 2.44e-66 211
Msa0114790 AT5G18270.1 60.870 161 59 3 11 167 21 181 6.59e-65 207
Msa0114790 AT5G18270.2 60.870 161 59 3 11 167 21 181 6.73e-65 207
Msa0114790 AT5G39610.1 51.643 213 91 5 4 208 9 217 6.69e-64 203
Msa0114790 AT4G28530.1 57.143 175 50 4 7 161 6 175 4.57e-63 203
Msa0114790 AT3G04060.1 46.154 247 117 6 11 243 20 264 3.77e-62 201
Msa0114790 AT1G76420.1 60.000 155 56 3 8 158 19 171 5.30e-62 200
Msa0114790 AT5G53950.1 61.635 159 56 3 11 164 17 175 6.04e-61 198
Msa0114790 AT3G29035.1 48.908 229 95 8 11 220 24 249 7.27e-61 196
Msa0114790 AT3G15170.1 48.230 226 92 5 8 220 17 230 2.14e-60 195
Msa0114790 AT2G24430.2 59.615 156 55 4 8 158 13 165 5.20e-60 194
Msa0114790 AT2G24430.1 59.615 156 55 4 8 158 13 165 5.20e-60 194
Msa0114790 AT1G71930.2 52.439 164 66 5 1 158 1 158 4.38e-56 184
Msa0114790 AT1G71930.1 52.439 164 66 5 1 158 1 158 4.38e-56 184
Msa0114790 AT1G12260.2 39.262 298 133 11 9 270 5 290 1.26e-55 184
Msa0114790 AT2G18060.3 46.465 198 93 5 6 193 4 198 3.80e-55 183
Msa0114790 AT2G18060.1 46.465 198 93 5 6 193 4 198 3.80e-55 183
Msa0114790 AT4G36160.1 54.248 153 62 3 11 158 10 159 2.94e-54 181
Msa0114790 AT4G36160.3 54.248 153 62 3 11 158 10 159 2.94e-54 181
Msa0114790 AT4G36160.2 54.248 153 62 3 11 158 14 163 3.38e-54 181
Msa0114790 AT1G12260.1 50.000 180 76 5 9 178 5 180 3.59e-54 181
Msa0114790 AT5G62380.2 56.410 156 58 4 9 158 5 156 4.14e-54 180
Msa0114790 AT5G62380.1 56.410 156 58 4 9 158 5 156 4.14e-54 180
Msa0114790 AT1G62700.1 49.206 189 80 6 9 191 5 183 3.10e-53 179
Msa0114790 AT1G62700.2 49.206 189 80 6 9 191 5 183 3.10e-53 179
Msa0114790 AT3G04070.2 50.292 171 72 3 9 166 8 178 3.12e-53 177
Msa0114790 AT4G10350.1 53.595 153 65 3 11 158 9 160 3.44e-53 177
Msa0114790 AT3G61910.1 49.704 169 68 4 8 159 8 176 2.24e-52 175
Msa0114790 AT4G27410.2 52.258 155 71 2 6 158 9 162 4.56e-52 173
Msa0114790 AT2G46770.1 49.405 168 68 3 8 158 13 180 5.29e-52 175
Msa0114790 AT1G33280.1 51.875 160 68 3 4 158 1 156 5.42e-52 173
Msa0114790 AT1G54330.1 56.098 164 64 4 6 165 1 160 1.82e-51 172
Msa0114790 AT5G66300.1 50.617 162 69 4 11 165 12 169 4.68e-51 170
Msa0114790 AT3G04070.1 45.989 187 72 3 9 166 8 194 9.91e-51 171
Msa0114790 AT3G17730.1 52.532 158 70 3 6 159 1 157 2.06e-50 167
Msa0114790 AT3G15500.1 49.697 165 73 4 6 165 9 168 9.53e-50 168
Msa0114790 AT1G79580.3 50.955 157 67 4 8 158 14 166 1.57e-49 169
Msa0114790 AT1G79580.5 50.955 157 67 4 8 158 14 166 1.57e-49 169
Msa0114790 AT1G79580.4 50.955 157 67 4 8 158 14 166 1.57e-49 169
Msa0114790 AT1G79580.2 50.955 157 67 4 8 158 14 166 1.57e-49 169
Msa0114790 AT1G79580.1 50.955 157 67 4 8 158 14 166 1.57e-49 169
Msa0114790 AT5G17260.1 50.955 157 73 2 6 158 1 157 2.30e-49 171
Msa0114790 AT1G52890.1 49.697 165 73 4 6 165 9 168 3.15e-49 166
Msa0114790 AT5G61430.2 50.000 190 75 6 58 232 2 186 3.45e-49 165
Msa0114790 AT3G03200.1 48.256 172 84 3 6 173 1 171 5.67e-49 170
Msa0114790 AT1G32770.1 38.934 244 127 8 8 229 13 256 7.97e-49 166
Msa0114790 AT1G65910.1 52.229 157 70 3 6 158 1 156 2.14e-48 171
Msa0114790 AT4G27410.3 47.093 172 71 3 6 158 9 179 1.30e-47 162
Msa0114790 AT4G35580.1 51.497 167 64 5 1 158 1 159 1.31e-47 167
Msa0114790 AT1G01720.1 38.760 258 125 8 10 243 6 254 1.37e-47 161
Msa0114790 AT4G35580.3 51.497 167 64 5 1 158 1 159 1.49e-47 167
Msa0114790 AT1G61110.1 45.405 185 78 6 2 169 7 185 1.51e-47 162
Msa0114790 AT4G35580.2 51.497 167 64 5 1 158 1 159 1.53e-47 167
Msa0114790 AT1G69490.1 47.799 159 72 3 8 158 6 161 1.27e-46 158
Msa0114790 AT5G08790.1 48.408 157 74 3 8 158 4 159 7.46e-46 157
Msa0114790 AT5G63790.1 48.101 158 75 3 7 158 46 202 2.64e-45 156
Msa0114790 AT5G63790.2 48.101 158 75 3 7 158 56 212 2.65e-45 156
Msa0114790 AT3G10490.1 50.602 166 75 4 7 168 23 185 3.47e-45 154
Msa0114790 AT1G77450.1 47.468 158 78 3 5 158 4 160 4.67e-45 154
Msa0114790 AT5G39820.1 44.149 188 81 6 2 165 11 198 5.92e-45 156
Msa0114790 AT3G10480.1 47.027 185 84 5 11 184 27 208 2.86e-44 157
Msa0114790 AT5G46590.1 47.561 164 80 4 6 164 1 163 8.18e-44 152
Msa0114790 AT3G10490.2 51.592 157 72 3 7 159 23 179 9.86e-44 155
Msa0114790 AT1G26870.1 41.584 202 77 5 7 190 12 190 2.14e-43 154
Msa0114790 AT5G13180.1 45.029 171 74 6 1 160 1 162 2.15e-43 149
Msa0114790 AT2G33480.1 49.020 153 72 4 10 160 14 162 3.66e-43 149
Msa0114790 AT2G43000.1 42.703 185 100 3 8 187 16 199 4.12e-43 149
Msa0114790 AT2G33480.2 49.673 153 69 4 10 160 14 160 4.25e-43 149
Msa0114790 AT3G10480.2 47.027 185 83 6 11 184 27 207 4.87e-43 153
Msa0114790 AT5G04410.1 50.327 153 71 4 11 159 9 160 6.92e-43 155
Msa0114790 AT3G15510.1 47.170 159 70 4 15 159 21 179 8.30e-43 151
Msa0114790 AT1G32510.1 47.368 171 79 3 6 165 1 171 9.09e-43 149
Msa0114790 AT3G10500.1 49.673 153 72 4 11 159 9 160 1.02e-42 154
Msa0114790 AT1G33060.1 47.799 159 64 4 11 158 24 174 1.70e-42 155
Msa0114790 AT1G33060.2 47.799 159 64 4 11 158 24 174 1.85e-42 155
Msa0114790 AT4G17980.1 44.149 188 91 5 6 179 1 188 2.55e-42 147
Msa0114790 AT4G17980.2 44.149 188 91 5 6 179 1 188 3.37e-42 147
Msa0114790 AT2G02450.1 48.993 149 70 4 13 158 53 198 1.32e-41 148
Msa0114790 AT2G02450.2 49.660 147 68 4 13 156 53 196 1.37e-41 149
Msa0114790 AT5G46590.2 50.746 134 61 3 6 134 1 134 2.48e-41 145
Msa0114790 AT1G52880.1 46.108 167 71 4 15 165 21 184 1.44e-40 144
Msa0114790 AT3G10480.3 41.284 218 81 6 11 184 27 241 1.83e-40 148
Msa0114790 AT5G24590.2 44.324 185 94 6 9 186 11 193 1.22e-39 144
Msa0114790 AT2G17040.1 45.695 151 71 3 13 158 8 152 1.46e-37 135
Msa0114790 AT3G12910.1 45.062 162 70 5 13 156 23 183 3.51e-37 134
Msa0114790 AT4G28530.2 42.197 173 42 4 7 161 6 138 5.21e-37 134
Msa0114790 AT5G09330.5 41.139 158 88 3 6 159 1 157 1.62e-36 137
Msa0114790 AT5G09330.2 41.139 158 88 3 6 159 1 157 1.62e-36 137
Msa0114790 AT5G09330.4 41.139 158 88 3 6 159 1 157 1.62e-36 137
Msa0114790 AT5G09330.3 41.139 158 88 3 6 159 1 157 1.62e-36 137
Msa0114790 AT5G09330.1 41.139 158 88 3 6 159 1 157 1.62e-36 137
Msa0114790 AT3G49530.2 43.312 157 83 5 11 162 13 168 1.91e-36 135
Msa0114790 AT2G27300.1 40.000 180 93 6 2 175 5 175 2.05e-36 133
Msa0114790 AT3G49530.1 43.312 157 83 5 11 162 13 168 5.53e-36 135
Msa0114790 AT1G34180.3 44.079 152 76 4 13 158 18 166 5.54e-36 134
Msa0114790 AT1G34180.1 43.791 153 77 4 13 159 18 167 2.06e-35 134
Msa0114790 AT4G10350.2 57.895 95 39 1 64 158 20 113 9.17e-35 128
Msa0114790 AT1G34190.1 48.031 127 62 2 13 135 18 144 1.45e-34 132
Msa0114790 AT5G64060.1 40.506 158 89 3 6 159 1 157 2.17e-34 128
Msa0114790 AT1G34180.4 41.463 164 75 5 13 158 18 178 4.72e-34 129
Msa0114790 AT1G34180.2 41.212 165 76 5 13 159 18 179 1.36e-33 129
Msa0114790 AT5G22290.1 39.375 160 86 4 5 161 15 166 3.29e-33 125
Msa0114790 AT3G44290.2 41.096 146 75 3 13 155 16 153 2.50e-32 120
Msa0114790 AT3G44290.1 41.096 146 75 3 13 155 16 153 1.65e-31 120
Msa0114790 AT1G32870.2 41.143 175 94 4 3 173 2 171 6.20e-31 122
Msa0114790 AT1G32870.1 41.143 175 94 4 3 173 2 171 7.16e-31 121
Msa0114790 AT1G32870.3 41.143 175 94 4 3 173 38 207 1.12e-30 121
Msa0114790 AT5G04395.1 41.216 148 69 3 5 134 22 169 2.10e-29 111
Msa0114790 AT2G33480.3 50.515 97 47 1 64 160 10 105 5.66e-28 108
Msa0114790 AT1G02230.1 31.064 235 143 6 12 237 4 228 2.62e-27 109
Msa0114790 AT3G04420.2 32.474 194 115 5 12 197 4 189 8.72e-25 101
Msa0114790 AT5G22380.1 37.908 153 85 6 14 156 8 160 9.50e-25 100
Msa0114790 AT2G18060.2 43.750 112 55 3 87 193 2 110 2.48e-24 100
Msa0114790 AT3G04420.1 30.000 240 137 8 12 233 4 230 2.50e-24 101
Msa0114790 AT3G44350.2 34.177 158 96 4 10 159 4 161 3.18e-24 99.0
Msa0114790 AT4G01520.1 34.659 176 93 8 10 171 3 170 2.86e-23 97.8
Msa0114790 AT4G01550.1 36.306 157 84 7 14 161 7 156 5.58e-23 99.0
Msa0114790 AT5G64530.2 38.462 130 60 5 11 134 3 118 1.41e-22 92.4
Msa0114790 AT5G64530.1 33.526 173 72 7 11 159 3 156 2.11e-22 92.8
Msa0114790 AT3G10490.4 56.410 78 34 0 82 159 2 79 3.21e-22 95.5
Msa0114790 AT3G10490.3 56.410 78 34 0 82 159 2 79 3.21e-22 95.5
Msa0114790 AT3G44350.1 37.879 132 74 4 10 133 4 135 3.62e-22 91.3
Msa0114790 AT4G01540.4 33.526 173 91 8 14 171 7 170 5.09e-22 95.5
Msa0114790 AT4G01540.2 33.526 173 91 8 14 171 7 170 8.34e-22 95.1
Msa0114790 AT4G01540.3 33.526 173 91 8 14 171 7 170 8.38e-22 95.1
Msa0114790 AT4G01540.1 33.526 173 91 8 14 171 7 170 1.04e-21 95.5
Msa0114790 AT2G43000.2 39.167 120 70 1 71 187 2 121 2.75e-21 89.7
Msa0114790 AT1G02250.1 31.925 213 119 10 12 210 4 204 9.17e-20 89.0
Msa0114790 AT1G02220.1 36.719 128 70 4 12 132 4 127 1.16e-19 89.0
Msa0114790 AT5G50820.1 36.923 130 70 4 10 134 16 138 2.56e-18 81.6
Msa0114790 AT1G01010.1 31.447 159 87 6 14 158 6 156 1.75e-16 79.7
Msa0114790 AT5G14000.2 33.588 131 81 3 10 136 14 142 2.37e-15 72.8
Msa0114790 AT5G22290.2 44.595 74 33 2 88 161 2 67 2.24e-14 71.6
Msa0114790 AT5G14000.1 31.788 151 93 5 10 156 14 158 2.42e-14 70.9
Msa0114790 AT3G56530.1 26.582 158 106 4 5 156 46 199 4.06e-14 72.0
Msa0114790 AT3G55210.1 27.168 173 103 5 1 156 1 167 8.16e-14 70.9
Msa0114790 AT3G04430.1 30.201 149 89 4 17 150 6 154 5.56e-13 67.0

Find 110 sgRNAs with CRISPR-Local

Find 302 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATAATTTGCTATTAGTTTA+AGG 0.099186 1_3:-33010067 None:intergenic
TTCATCACTTCCAGCATTAA+TGG 0.146600 1_3:-33010942 Msa0114790:CDS
TTTCCCTAAGTTAAAGAAAT+TGG 0.197910 1_3:-33010510 Msa0114790:three_prime_UTR
ATTAATGATCAAAACCTAAA+AGG 0.212913 1_3:-33010656 Msa0114790:CDS
GAAAGATGGGGCTTTGTAAT+TGG 0.225285 1_3:-33010216 Msa0114790:three_prime_UTR
AGATTGGGTTGGTTTGGTTT+TGG 0.240100 1_3:+33010843 None:intergenic
TCCTAAAATTTCATCTTCTA+AGG 0.243571 1_3:-33012020 Msa0114790:intron
GTGCAACTGCATCAGGTTAT+TGG 0.304123 1_3:-33012192 Msa0114790:CDS
TTGTTGGCTAGAGGTAATTT+TGG 0.309334 1_3:+33010794 None:intergenic
GTTCCATATTGGTTGTAATA+TGG 0.321690 1_3:+33010816 None:intergenic
CAACCATATTACAACCAATA+TGG 0.321767 1_3:-33010819 Msa0114790:CDS
GTAGCCCTGTTGCATATTTA+CGG 0.328714 1_3:+33012224 None:intergenic
ATAATTTGCTATTAGTTTAA+GGG 0.329740 1_3:-33010066 None:intergenic
ACTTGCATTGTTGTTATTGT+TGG 0.333988 1_3:+33010778 None:intergenic
AATCATCTACCGTTGTAATA+TGG 0.342585 1_3:-33010420 Msa0114790:three_prime_UTR
AACAACAATGCAAGTACATT+TGG 0.349859 1_3:-33010770 Msa0114790:CDS
TGATCCAATTTCTTTAACTT+AGG 0.363392 1_3:+33010506 None:intergenic
CACAACAAGAAAATTTAAAT+AGG 0.369872 1_3:+33010535 None:intergenic
CTTCGTAAGGGCACTCTTGT+TGG 0.373702 1_3:-33012142 Msa0114790:CDS
GATAAAGGGTCTAAGCTATA+AGG 0.378533 1_3:+33010740 None:intergenic
GATCCAATTTCTTTAACTTA+GGG 0.379400 1_3:+33010507 None:intergenic
GGTTGTAGATTGGGTTGGTT+TGG 0.395494 1_3:+33010837 None:intergenic
GCTGCGACGGTAGAGGATTC+AGG 0.398422 1_3:-33010464 Msa0114790:three_prime_UTR
TTGTAATATGGTTGTAGATT+GGG 0.402170 1_3:+33010828 None:intergenic
AGAGACCGTAAATATGCAAC+AGG 0.409929 1_3:-33012229 Msa0114790:CDS
TTGTGTATATACAGGAAGAT+TGG 0.410383 1_3:-33011048 Msa0114790:intron
TTGTTAAAATAGATCATTGT+GGG 0.422066 1_3:-33010136 Msa0114790:three_prime_UTR
TGTGTATATACAGGAAGATT+GGG 0.427064 1_3:-33011047 Msa0114790:intron
GTTGTAATATGGTTGTAGAT+TGG 0.429160 1_3:+33010827 None:intergenic
TGTGAGCCATGGGATATTCC+TGG 0.431452 1_3:-33015123 Msa0114790:intron
TTTGAGTCAACTATCAAAGA+TGG 0.431620 1_3:-33010690 Msa0114790:CDS
GCCCCATCTTTCTAATATAC+CGG 0.433813 1_3:+33010227 None:intergenic
TTAATGATCAAAACCTAAAA+GGG 0.436538 1_3:-33010655 Msa0114790:CDS
CCCATGGCTCACACTTGTTA+AGG 0.440925 1_3:+33015133 None:intergenic
ACAAATCGTGCAACTGCATC+AGG 0.442887 1_3:-33012199 Msa0114790:CDS
CTTGCTCATATTCATCTGTA+TGG 0.443475 1_3:+33010888 None:intergenic
TTGGGAAAACATGGAGAAGC+AGG 0.444127 1_3:+33010862 None:intergenic
ATGCATGAGTTTCGTATTGA+GGG 0.459420 1_3:-33012055 Msa0114790:CDS
TCAGGTTATTGGAAGGCAAC+AGG 0.459668 1_3:-33012181 Msa0114790:CDS
ATCAAGGAAGGGCACCTAAA+GGG 0.466310 1_3:-33012096 Msa0114790:CDS
GTCCCGGTATATTAGAAAGA+TGG 0.472841 1_3:-33010230 Msa0114790:three_prime_UTR
AGGATCCAATTTCGATGAAA+AGG 0.474863 1_3:-33010383 Msa0114790:three_prime_UTR
AAGACTTTAGTGTTCTATCA+AGG 0.477018 1_3:-33012112 Msa0114790:CDS
TCCCGGTATATTAGAAAGAT+GGG 0.477592 1_3:-33010229 Msa0114790:three_prime_UTR
TATGCATGAGTTTCGTATTG+AGG 0.481434 1_3:-33012056 Msa0114790:CDS
GTCAACATCAATCATGAGAA+AGG 0.483380 1_3:+33015155 None:intergenic
GGAATTAATTATAGAGAAGG+TGG 0.494514 1_3:+33015361 None:intergenic
TGCTACAAAACCTCCAAGCA+TGG 0.497760 1_3:-33010990 Msa0114790:CDS
TGAGAGTTACTTATCTGAAG+TGG 0.505837 1_3:-33010603 Msa0114790:CDS
CATCTGTATGGAATTGAGCT+TGG 0.508894 1_3:+33010900 None:intergenic
ATGTGGTGCTGCGACGGTAG+AGG 0.522239 1_3:-33010471 Msa0114790:three_prime_UTR
AAAGGGTCATCACCAAGCTT+AGG 0.523339 1_3:-33010638 Msa0114790:CDS
TTTCGTATTGAGGGTCCTCA+TGG 0.526305 1_3:-33012046 Msa0114790:CDS
CTTTAGTGTTCTATCAAGGA+AGG 0.528388 1_3:-33012108 Msa0114790:CDS
AACAATGCAAGTACATTTGG+AGG 0.528454 1_3:-33010767 Msa0114790:CDS
GGACAGAGCTATCCTTCGTA+AGG 0.530042 1_3:-33012155 Msa0114790:CDS
GATGGAATTAATTATAGAGA+AGG 0.531426 1_3:+33015358 None:intergenic
ATGTAAGAATCCATTAATGC+TGG 0.533005 1_3:+33010932 None:intergenic
TCATAGCAACTACCCATGCT+TGG 0.533828 1_3:+33010977 None:intergenic
TATCAAGGAAGGGCACCTAA+AGG 0.534747 1_3:-33012097 Msa0114790:CDS
GAACTTCCTTCACCTAAGCT+TGG 0.537127 1_3:+33010626 None:intergenic
CCTTAACAAGTGTGAGCCAT+GGG 0.539747 1_3:-33015133 Msa0114790:CDS
CACACAAGCTCTTCATCTCT+AGG 0.541777 1_3:+33015213 None:intergenic
GATTCAGGTCCGGATTGAAA+AGG 0.545804 1_3:-33010449 Msa0114790:three_prime_UTR
TAGCAACTACCCATGCTTGG+AGG 0.547765 1_3:+33010980 None:intergenic
GAGAGTTACTTATCTGAAGT+GGG 0.548125 1_3:-33010602 Msa0114790:CDS
GAGTAACATAAGCATGGTTG+AGG 0.554745 1_3:-33015265 Msa0114790:CDS
CCCCATCTTTCTAATATACC+GGG 0.556445 1_3:+33010228 None:intergenic
GACGGTAGAGGATTCAGGTC+CGG 0.561922 1_3:-33010459 Msa0114790:three_prime_UTR
CCAATTTAAAAGTGAAACAA+TGG 0.564555 1_3:-33010113 Msa0114790:three_prime_UTR
AATATGGTTGTAGATTGGGT+TGG 0.565125 1_3:+33010832 None:intergenic
TTAGAAATTGTTCCACATGT+GGG 0.570954 1_3:+33010574 None:intergenic
TAGAAATTGTTCCACATGTG+GGG 0.571008 1_3:+33010575 None:intergenic
ATTAGAAATTGTTCCACATG+TGG 0.572291 1_3:+33010573 None:intergenic
CAAGAAAATTTAAATAGGAG+TGG 0.577377 1_3:+33010540 None:intergenic
TATAACATGATTTAAAACAA+TGG 0.578918 1_3:+33010315 None:intergenic
TCTATCCACATGATATGTCC+CGG 0.579561 1_3:-33010246 Msa0114790:three_prime_UTR
TCTAAAATGTGGTGCTGCGA+CGG 0.591737 1_3:-33010477 Msa0114790:three_prime_UTR
ACCTTAACAAGTGTGAGCCA+TGG 0.592225 1_3:-33015134 Msa0114790:CDS
ATGTGGAACAATTTCTAATG+TGG 0.595031 1_3:-33010569 Msa0114790:exon
ATTAATTATAGAGAAGGTGG+AGG 0.598614 1_3:+33015364 None:intergenic
GCTACAAAACCTCCAAGCAT+GGG 0.600781 1_3:-33010989 Msa0114790:CDS
GTTGAGGCAAAGCTACCACC+AGG 0.601916 1_3:-33015249 Msa0114790:CDS
GTGTGATTACTTGATGAAGA+AGG 0.603211 1_3:-33015193 Msa0114790:CDS
CATGTGTGGGAGGGAAAGAG+TGG 0.608228 1_3:-33012267 Msa0114790:CDS
CAGAAGCAGCATGTGTGGGA+GGG 0.608897 1_3:-33012276 Msa0114790:CDS
TTTAGTGTTCTATCAAGGAA+GGG 0.615096 1_3:-33012107 Msa0114790:CDS
TTATTGGAAGGCAACAGGAA+AGG 0.621123 1_3:-33012176 Msa0114790:CDS
TACTAACCAGGAATATCCCA+TGG 0.624451 1_3:+33015117 None:intergenic
ATATGGTGCTGAAGCTGTAG+AGG 0.625759 1_3:-33010403 Msa0114790:three_prime_UTR
TCATCACCAAGCTTAGGTGA+AGG 0.632923 1_3:-33010632 Msa0114790:CDS
AACTGCATCAGGTTATTGGA+AGG 0.632925 1_3:-33012188 Msa0114790:CDS
GACAGAGCTATCCTTCGTAA+GGG 0.632999 1_3:-33012154 Msa0114790:CDS
TTTGTTAAAATAGATCATTG+TGG 0.638660 1_3:-33010137 Msa0114790:three_prime_UTR
TTGTTGTTATTGTTGGCTAG+AGG 0.638919 1_3:+33010785 None:intergenic
TGGGAAAACATGGAGAAGCA+GGG 0.639023 1_3:+33010863 None:intergenic
TGGTGCAGAAGCAGCATGTG+TGG 0.642823 1_3:-33012281 Msa0114790:intron
GCAGAAGCAGCATGTGTGGG+AGG 0.644425 1_3:-33012277 Msa0114790:intron
CTAGGATGAAATCTGAACCC+TGG 0.649291 1_3:+33015231 None:intergenic
CAACAAGAGTGCCCTTACGA+AGG 0.654867 1_3:+33012143 None:intergenic
ATATACCGGGACATATCATG+TGG 0.657333 1_3:+33010241 None:intergenic
GGTAGTTGCTATGATGACAC+AGG 0.669164 1_3:-33010968 Msa0114790:CDS
AAGTGGGTATGCCCCACATG+TGG 0.670092 1_3:-33010586 Msa0114790:CDS
CCCGGTATATTAGAAAGATG+GGG 0.684881 1_3:-33010228 Msa0114790:three_prime_UTR
GATCATCTGCATCTAAAATG+TGG 0.685018 1_3:-33010488 Msa0114790:three_prime_UTR
GGTGCAGAAGCAGCATGTGT+GGG 0.686440 1_3:-33012280 Msa0114790:intron
GGATGAAATCTGAACCCTGG+TGG 0.692300 1_3:+33015234 None:intergenic
GCTTCAGCACCATATTACAA+CGG 0.738936 1_3:+33010411 None:intergenic
GAGACCGTAAATATGCAACA+GGG 0.752701 1_3:-33012228 Msa0114790:CDS
TTGAGGCAAAGCTACCACCA+GGG 0.776299 1_3:-33015248 Msa0114790:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTATAAATAAATAA+TGG + chr1_3:33011415-33011434 None:intergenic 0.0%
!!! TTATTTTTTATAAATATTTT+TGG - chr1_3:33013568-33013587 Msa0114790:intron 0.0%
!!! TTCTTTATTAAATTTTGATA+AGG - chr1_3:33010613-33010632 Msa0114790:CDS 10.0%
!!! TCTTTATTAAATTTTGATAA+GGG - chr1_3:33010614-33010633 Msa0114790:CDS 10.0%
!! GTAAAAAAATATATATCAAA+TGG + chr1_3:33012926-33012945 None:intergenic 10.0%
!!! AACAAATAGTTTTTTTTAAA+GGG + chr1_3:33013009-33013028 None:intergenic 10.0%
!!! TAACAAATAGTTTTTTTTAA+AGG + chr1_3:33013010-33013029 None:intergenic 10.0%
!! TATAGTTATTAAAATAAACT+AGG - chr1_3:33013085-33013104 Msa0114790:intron 10.0%
!! ATAGTTATTAAAATAAACTA+GGG - chr1_3:33013086-33013105 Msa0114790:intron 10.0%
!!! TTGTGTTTAAAATATTTATA+AGG - chr1_3:33014002-33014021 Msa0114790:intron 10.0%
!!! TTTTTTTTCTAACAAAGATA+TGG + chr1_3:33010143-33010162 None:intergenic 15.0%
!!! AAATTTTCTCATAAAGAAAT+AGG - chr1_3:33010440-33010459 Msa0114790:three_prime_UTR 15.0%
!!! GTTAATTTAATTTCCAATTA+AGG - chr1_3:33010767-33010786 Msa0114790:CDS 15.0%
!! AAGACAGAAAAAAATAAATT+TGG - chr1_3:33011029-33011048 Msa0114790:CDS 15.0%
!! TACATACATAAATATGTAAA+TGG - chr1_3:33012123-33012142 Msa0114790:CDS 15.0%
!! AAGATATAAAATAATACAAG+TGG + chr1_3:33012222-33012241 None:intergenic 15.0%
!!! TGTATTATTTTATATCTTCA+AGG - chr1_3:33012224-33012243 Msa0114790:CDS 15.0%
!! TTTGTCAATTTAAATAGTTA+TGG - chr1_3:33012316-33012335 Msa0114790:intron 15.0%
!!! GAATTTTTTTATATCAACAA+GGG - chr1_3:33012338-33012357 Msa0114790:intron 15.0%
!! ATAATTAAAATACAAACACA+TGG + chr1_3:33012422-33012441 None:intergenic 15.0%
!!! ATTAATGTAATGGAAATATA+TGG - chr1_3:33013128-33013147 Msa0114790:intron 15.0%
!! TATAATTAGTGTAAAGAAAA+TGG + chr1_3:33013623-33013642 None:intergenic 15.0%
!! TTTCTTTACACTAATTATAT+TGG - chr1_3:33013624-33013643 Msa0114790:intron 15.0%
!! AGATTGACAAATAAAAATTA+AGG - chr1_3:33013736-33013755 Msa0114790:intron 15.0%
!! ACCATATATGTTAAATTAAA+TGG - chr1_3:33014146-33014165 Msa0114790:intron 15.0%
!!! ACCATTTAATTTAACATATA+TGG + chr1_3:33014150-33014169 None:intergenic 15.0%
!!! TATAACATGATTTAAAACAA+TGG + chr1_3:33015117-33015136 None:intergenic 15.0%
!!! AAGTGAGAAATTTTTTAAGA+TGG + chr1_3:33010092-33010111 None:intergenic 20.0%
!!! ATTTAATTTCCAATTAAGGT+AGG - chr1_3:33010771-33010790 Msa0114790:CDS 20.0%
!! ATACTTAGGATAAAATACAT+TGG - chr1_3:33011356-33011375 Msa0114790:intron 20.0%
!! ACTATCAAAGTCTTTATAAT+AGG + chr1_3:33011641-33011660 None:intergenic 20.0%
!! CTTTCTAAACACAAATATAA+TGG + chr1_3:33011932-33011951 None:intergenic 20.0%
!!! TTTAATTTGTATGCACAAAT+AGG + chr1_3:33012186-33012205 None:intergenic 20.0%
!!! GGAATTTTTTTATATCAACA+AGG - chr1_3:33012337-33012356 Msa0114790:intron 20.0%
!! ATAAAATCCAAAACTAGTTA+TGG + chr1_3:33012481-33012500 None:intergenic 20.0%
!! AAATGAAAAAGAAACTGTTA+GGG - chr1_3:33012518-33012537 Msa0114790:intron 20.0%
!!! AACAGTAATAATTTTGTTTG+TGG + chr1_3:33012670-33012689 None:intergenic 20.0%
!! TGTTCTAATAATTAAGACAA+AGG - chr1_3:33012686-33012705 Msa0114790:intron 20.0%
!! AGTTATTATAGATCAATGAA+AGG + chr1_3:33012833-33012852 None:intergenic 20.0%
!! ATATATATCAAATGGAACAT+GGG + chr1_3:33012918-33012937 None:intergenic 20.0%
!! AATATATATCAAATGGAACA+TGG + chr1_3:33012919-33012938 None:intergenic 20.0%
!! TCTTAGTCTAATTAATGTAA+TGG - chr1_3:33013118-33013137 Msa0114790:intron 20.0%
!!! TATTTCTTTCTCCTTTAAAA+AGG + chr1_3:33013517-33013536 None:intergenic 20.0%
!!! TCATTTTGCAACATATTTTT+TGG - chr1_3:33013666-33013685 Msa0114790:intron 20.0%
!! ATGTGACTTCAAAAATATAT+TGG - chr1_3:33013830-33013849 Msa0114790:intron 20.0%
!! TGTGACTTCAAAAATATATT+GGG - chr1_3:33013831-33013850 Msa0114790:intron 20.0%
!! GTTTAATAAAAAATTCAGAG+AGG + chr1_3:33013875-33013894 None:intergenic 20.0%
!! TTATCCAATCAAATATCAAA+AGG + chr1_3:33013960-33013979 None:intergenic 20.0%
!! TTCGTTAATTGTTAACTATT+CGG + chr1_3:33014247-33014266 None:intergenic 20.0%
!!! TTAGGTTTTGATCATTAATA+GGG + chr1_3:33014772-33014791 None:intergenic 20.0%
!!! TTTAGGTTTTGATCATTAAT+AGG + chr1_3:33014773-33014792 None:intergenic 20.0%
!! ATTAATGATCAAAACCTAAA+AGG - chr1_3:33014773-33014792 Msa0114790:intron 20.0%
!! TTAATGATCAAAACCTAAAA+GGG - chr1_3:33014774-33014793 Msa0114790:intron 20.0%
!! CACAACAAGAAAATTTAAAT+AGG + chr1_3:33014897-33014916 None:intergenic 20.0%
!!! CTATTTAAATTTTCTTGTTG+TGG - chr1_3:33014895-33014914 Msa0114790:intron 20.0%
!!! GTATCTATATATTTTTGTCA+TGG - chr1_3:33015137-33015156 Msa0114790:CDS 20.0%
!!! AATTTGTAGTTCATTTTAGT+TGG - chr1_3:33015244-33015263 Msa0114790:CDS 20.0%
!! TTTGTTAAAATAGATCATTG+TGG - chr1_3:33015292-33015311 Msa0114790:five_prime_UTR 20.0%
!! TTGTTAAAATAGATCATTGT+GGG - chr1_3:33015293-33015312 Msa0114790:five_prime_UTR 20.0%
! GATGGAATTAATTATAGAGA+AGG + chr1_3:33010074-33010093 None:intergenic 25.0%
! AAAAATGAGTAACATAAGCA+TGG - chr1_3:33010158-33010177 Msa0114790:three_prime_UTR 25.0%
! AACATGTCATGTGTATATAA+AGG + chr1_3:33010384-33010403 None:intergenic 25.0%
! ATAGCAAACTGAAAAATTGA+TGG + chr1_3:33010510-33010529 None:intergenic 25.0%
! ACTCATTTGTACTTTATCAA+TGG + chr1_3:33010535-33010554 None:intergenic 25.0%
! AGTATATATCAGTTTCCATT+AGG + chr1_3:33010941-33010960 None:intergenic 25.0%
! GACAAAAATCATCTCAAATT+TGG + chr1_3:33011058-33011077 None:intergenic 25.0%
!!! TCGATCTAATTTTTTCACAA+AGG + chr1_3:33011146-33011165 None:intergenic 25.0%
!!! AGCCTTTGTATTTTAATGTA+TGG - chr1_3:33011218-33011237 Msa0114790:intron 25.0%
! TGCCATACATTAAAATACAA+AGG + chr1_3:33011223-33011242 None:intergenic 25.0%
!!! TTGTATTTTAATGTATGGCA+TGG - chr1_3:33011223-33011242 Msa0114790:intron 25.0%
! TATTATTAATTCCTAATCCC+AGG - chr1_3:33011247-33011266 Msa0114790:intron 25.0%
! TATCTCTATTAAATATGCCT+GGG + chr1_3:33011267-33011286 None:intergenic 25.0%
! CATATTTAATAGAGATAGGT+AGG - chr1_3:33011270-33011289 Msa0114790:intron 25.0%
! TGCATACAAATTAAATCCAA+TGG - chr1_3:33012191-33012210 Msa0114790:CDS 25.0%
!!! AAGAGTGAAATTTTTTTTGC+TGG + chr1_3:33012250-33012269 None:intergenic 25.0%
!!! TTTTTTAGGCTTGATATGAT+AGG - chr1_3:33012369-33012388 Msa0114790:intron 25.0%
!! TACTGAAGCTTTTATAAAGT+AGG - chr1_3:33012396-33012415 Msa0114790:intron 25.0%
!!! GTTTCTTTTTCATTTCATGA+TGG + chr1_3:33012513-33012532 None:intergenic 25.0%
! GAAATGAAAAAGAAACTGTT+AGG - chr1_3:33012517-33012536 Msa0114790:intron 25.0%
! AATGAAAAAGAAACTGTTAG+GGG - chr1_3:33012519-33012538 Msa0114790:intron 25.0%
! TCAGGATAATATTGTTAATG+AGG - chr1_3:33012750-33012769 Msa0114790:intron 25.0%
! ATATTGTTAATGAGGACAAT+TGG - chr1_3:33012758-33012777 Msa0114790:intron 25.0%
! ATGTGAATTTAAGTAAGATG+AGG + chr1_3:33012865-33012884 None:intergenic 25.0%
!!! TAGAAGATGAAATTTTAGGA+GGG + chr1_3:33013409-33013428 None:intergenic 25.0%
!! TTAGAAGATGAAATTTTAGG+AGG + chr1_3:33013410-33013429 None:intergenic 25.0%
! TCCTAAAATTTCATCTTCTA+AGG - chr1_3:33013409-33013428 Msa0114790:intron 25.0%
!! ACCTTAGAAGATGAAATTTT+AGG + chr1_3:33013413-33013432 None:intergenic 25.0%
!! TTTTGGACAAAAATGACTAT+AGG - chr1_3:33013585-33013604 Msa0114790:intron 25.0%
! TTTGGACAAAAATGACTATA+GGG - chr1_3:33013586-33013605 Msa0114790:intron 25.0%
!!! ATTAAGGACTTTTGACTTTT+TGG - chr1_3:33013752-33013771 Msa0114790:intron 25.0%
!!! CTGTTATTTGTTTTGTAGAT+AGG + chr1_3:33013930-33013949 None:intergenic 25.0%
!! AAGACCTTTTGATATTTGAT+TGG - chr1_3:33013953-33013972 Msa0114790:intron 25.0%
! TGATATTTGATTGGATAACT+CGG - chr1_3:33013962-33013981 Msa0114790:intron 25.0%
! GTTATTCAATCAAAATCGAT+CGG - chr1_3:33014041-33014060 Msa0114790:intron 25.0%
! GTTAAATTGGTTGGAAAATT+CGG + chr1_3:33014179-33014198 None:intergenic 25.0%
! GTTTGAACTTAGAGTTAAAT+TGG + chr1_3:33014192-33014211 None:intergenic 25.0%
! ATTTAACTCTAAGTTCAAAC+CGG - chr1_3:33014192-33014211 Msa0114790:intron 25.0%
! TTAATTGTTAACTATTCGGA+GGG + chr1_3:33014243-33014262 None:intergenic 25.0%
! TTGTAATATGGTTGTAGATT+GGG + chr1_3:33014604-33014623 None:intergenic 25.0%
!! CTTTTCTATCACATGATAAA+GGG + chr1_3:33014706-33014725 None:intergenic 25.0%
!! ACTTTTCTATCACATGATAA+AGG + chr1_3:33014707-33014726 None:intergenic 25.0%
! CAAGAAAATTTAAATAGGAG+TGG + chr1_3:33014892-33014911 None:intergenic 25.0%
! TTTCCCTAAGTTAAAGAAAT+TGG - chr1_3:33014919-33014938 Msa0114790:intron 25.0%
!! GATCCAATTTCTTTAACTTA+GGG + chr1_3:33014925-33014944 None:intergenic 25.0%
!! TGATCCAATTTCTTTAACTT+AGG + chr1_3:33014926-33014945 None:intergenic 25.0%
!!! CCATTGTTTCACTTTTAAAT+TGG + chr1_3:33015319-33015338 None:intergenic 25.0%
! CCAATTTAAAAGTGAAACAA+TGG - chr1_3:33015316-33015335 Msa0114790:five_prime_UTR 25.0%
GGAATTAATTATAGAGAAGG+TGG + chr1_3:33010071-33010090 None:intergenic 30.0%
! AAGGAATGCATGATAATGAA+GGG + chr1_3:33010365-33010384 None:intergenic 30.0%
! AAAGGAATGCATGATAATGA+AGG + chr1_3:33010366-33010385 None:intergenic 30.0%
!! ATTTTGATAAGGGTAGATTG+AGG - chr1_3:33010624-33010643 Msa0114790:CDS 30.0%
GTGCTTTGATATGAAAATCA+TGG - chr1_3:33010701-33010720 Msa0114790:CDS 30.0%
AGATTATAGCCTACCTTAAT+TGG + chr1_3:33010783-33010802 None:intergenic 30.0%
GTTCAAGGATCAAAAGATTA+TGG + chr1_3:33010863-33010882 None:intergenic 30.0%
! ATCTTTTGATCCTTGAACAA+TGG - chr1_3:33010865-33010884 Msa0114790:CDS 30.0%
TGATAAATGAAAGAGCCTAA+TGG - chr1_3:33010923-33010942 Msa0114790:CDS 30.0%
TAGCTACGAAAATTTAGAGA+CGG + chr1_3:33011086-33011105 None:intergenic 30.0%
!!! TCCAATCTGCATTTTTTATG+TGG - chr1_3:33011179-33011198 Msa0114790:intron 30.0%
!!! CCAATCTGCATTTTTTATGT+GGG - chr1_3:33011180-33011199 Msa0114790:intron 30.0%
TATTAAATATGCCTGGGATT+AGG + chr1_3:33011261-33011280 None:intergenic 30.0%
CTATCTCTATTAAATATGCC+TGG + chr1_3:33011268-33011287 None:intergenic 30.0%
CAGGCATATTTAATAGAGAT+AGG - chr1_3:33011266-33011285 Msa0114790:intron 30.0%
AGTTAATCACGTTTATGTGT+AGG + chr1_3:33011709-33011728 None:intergenic 30.0%
!!! TTTCGAGTTTTACATATTGC+TGG - chr1_3:33011757-33011776 Msa0114790:intron 30.0%
! CTTTTGACATGAAAGTAAGA+TGG + chr1_3:33011801-33011820 None:intergenic 30.0%
!! AATACAAGTGGATTAACCAT+TGG + chr1_3:33012210-33012229 None:intergenic 30.0%
!!! CAAGGGCAAAATAGTTTTTT+AGG - chr1_3:33012355-33012374 Msa0114790:intron 30.0%
TGTTGAGATGTCTTCTAATT+AGG + chr1_3:33012548-33012567 None:intergenic 30.0%
ATGGAAGAGGATATGTATAT+TGG - chr1_3:33012572-33012591 Msa0114790:intron 30.0%
TGGAAGAGGATATGTATATT+GGG - chr1_3:33012573-33012592 Msa0114790:intron 30.0%
!! ATTTTGTTTGTGGCAAAACA+GGG + chr1_3:33012660-33012679 None:intergenic 30.0%
!! AATTTTGTTTGTGGCAAAAC+AGG + chr1_3:33012661-33012680 None:intergenic 30.0%
GTCATGAGCATTTAATCAAA+AGG - chr1_3:33012716-33012735 Msa0114790:intron 30.0%
CAAAAGGATTAAGTAAACTC+AGG - chr1_3:33012732-33012751 Msa0114790:intron 30.0%
AAGACTTTAGTGTTCTATCA+AGG - chr1_3:33013317-33013336 Msa0114790:intron 30.0%
TTTAGTGTTCTATCAAGGAA+GGG - chr1_3:33013322-33013341 Msa0114790:intron 30.0%
TAAAGGGAGAAAAACTGAAT+GGG - chr1_3:33013349-33013368 Msa0114790:intron 30.0%
! GCTTGATCTAACCTTTTTAA+AGG - chr1_3:33013503-33013522 Msa0114790:intron 30.0%
AAAGGAGAAAGAAATAAGTC+AGG - chr1_3:33013521-33013540 Msa0114790:intron 30.0%
! ATGTGAGACAAATTTGGTTT+CGG + chr1_3:33013796-33013815 None:intergenic 30.0%
! GTTTTGTAGATAGGAGAATT+TGG + chr1_3:33013921-33013940 None:intergenic 30.0%
GAACTTAGAGTTAAATTGGT+TGG + chr1_3:33014188-33014207 None:intergenic 30.0%
GTTAATTGTTAACTATTCGG+AGG + chr1_3:33014244-33014263 None:intergenic 30.0%
CAAAACAAGTGTCATAGTTT+AGG + chr1_3:33014329-33014348 None:intergenic 30.0%
GCATAATCTTGTGTATATAC+AGG - chr1_3:33014373-33014392 Msa0114790:intron 30.0%
TTGTGTATATACAGGAAGAT+TGG - chr1_3:33014381-33014400 Msa0114790:intron 30.0%
TGTGTATATACAGGAAGATT+GGG - chr1_3:33014382-33014401 Msa0114790:intron 30.0%
ATGTAAGAATCCATTAATGC+TGG + chr1_3:33014500-33014519 None:intergenic 30.0%
GTTGTAATATGGTTGTAGAT+TGG + chr1_3:33014605-33014624 None:intergenic 30.0%
CAACCATATTACAACCAATA+TGG - chr1_3:33014610-33014629 Msa0114790:intron 30.0%
! GTTCCATATTGGTTGTAATA+TGG + chr1_3:33014616-33014635 None:intergenic 30.0%
!!! AGGTAATTTTGGTTCCATAT+TGG + chr1_3:33014627-33014646 None:intergenic 30.0%
! ACTTGCATTGTTGTTATTGT+TGG + chr1_3:33014654-33014673 None:intergenic 30.0%
AACAACAATGCAAGTACATT+TGG - chr1_3:33014659-33014678 Msa0114790:intron 30.0%
TTTGAGTCAACTATCAAAGA+TGG - chr1_3:33014739-33014758 Msa0114790:intron 30.0%
TTAGAAATTGTTCCACATGT+GGG + chr1_3:33014858-33014877 None:intergenic 30.0%
ATTAGAAATTGTTCCACATG+TGG + chr1_3:33014859-33014878 None:intergenic 30.0%
ATGTGGAACAATTTCTAATG+TGG - chr1_3:33014860-33014879 Msa0114790:intron 30.0%
! ATTCAGATTCCTTTTCAATC+CGG + chr1_3:33014992-33015011 None:intergenic 30.0%
AATCATCTACCGTTGTAATA+TGG - chr1_3:33015009-33015028 Msa0114790:intron 30.0%
! AGACAAAAATAGGAGTACAA+GGG - chr1_3:33015076-33015095 Msa0114790:intron 30.0%
!!! TTGTAGTTCATTTTAGTTGG+TGG - chr1_3:33015247-33015266 Msa0114790:CDS 30.0%
GTGTGATTACTTGATGAAGA+AGG - chr1_3:33010236-33010255 Msa0114790:three_prime_UTR 35.0%
GTCAACATCAATCATGAGAA+AGG + chr1_3:33010277-33010296 None:intergenic 35.0%
! TCAGAGCATTAATACTAACC+AGG + chr1_3:33010327-33010346 None:intergenic 35.0%
ATAGCTGTAACCATTGTTCA+AGG + chr1_3:33010878-33010897 None:intergenic 35.0%
TTGAACAATGGTTACAGCTA+TGG - chr1_3:33010877-33010896 Msa0114790:CDS 35.0%
CCCACATAAAAAATGCAGAT+TGG + chr1_3:33011183-33011202 None:intergenic 35.0%
TAATAGAGATAGGTAGGTAC+AGG - chr1_3:33011276-33011295 Msa0114790:intron 35.0%
AGATGGACATAGACTTAGTT+TGG + chr1_3:33011784-33011803 None:intergenic 35.0%
AGAGAGACTTATCATTAGGA+GGG - chr1_3:33011839-33011858 Msa0114790:intron 35.0%
! GTTTTATATGCATGATCGTG+AGG - chr1_3:33011884-33011903 Msa0114790:intron 35.0%
!! GAAATCGCCATAACTAGTTT+TGG - chr1_3:33012471-33012490 Msa0114790:intron 35.0%
GAAGACATCTCAACAATTGA+TGG - chr1_3:33012553-33012572 Msa0114790:intron 35.0%
ATCTCAACAATTGATGGAAG+AGG - chr1_3:33012559-33012578 Msa0114790:intron 35.0%
CTTTAGTGTTCTATCAAGGA+AGG - chr1_3:33013321-33013340 Msa0114790:intron 35.0%
! CATTCAGTTTTTCTCCCTTT+AGG + chr1_3:33013350-33013369 None:intergenic 35.0%
CTAAAGGGAGAAAAACTGAA+TGG - chr1_3:33013348-33013367 Msa0114790:intron 35.0%
TATGCATGAGTTTCGTATTG+AGG - chr1_3:33013373-33013392 Msa0114790:intron 35.0%
ATGCATGAGTTTCGTATTGA+GGG - chr1_3:33013374-33013393 Msa0114790:intron 35.0%
! AAAAATGACTATAGGGCACT+TGG - chr1_3:33013593-33013612 Msa0114790:intron 35.0%
!! ATAGCCTTGTATTACTTTCC+TGG - chr1_3:33013691-33013710 Msa0114790:intron 35.0%
CATACCAGGAAAGTAATACA+AGG + chr1_3:33013698-33013717 None:intergenic 35.0%
TTACTTTCCTGGTATGAATG+AGG - chr1_3:33013702-33013721 Msa0114790:intron 35.0%
TACTTTCCTGGTATGAATGA+GGG - chr1_3:33013703-33013722 Msa0114790:intron 35.0%
GAAACCAAATTTGTCTCACA+TGG - chr1_3:33013795-33013814 Msa0114790:intron 35.0%
ATAGCCATGTGAGACAAATT+TGG + chr1_3:33013802-33013821 None:intergenic 35.0%
AATTTGTCTCACATGGCTAT+TGG - chr1_3:33013802-33013821 Msa0114790:intron 35.0%
AATTCAGAGAGGATCTACTT+AGG + chr1_3:33013864-33013883 None:intergenic 35.0%
! TTGACTCGATGACCTTAATA+TGG - chr1_3:33014074-33014093 Msa0114790:intron 35.0%
TGACTCGATGACCTTAATAT+GGG - chr1_3:33014075-33014094 Msa0114790:intron 35.0%
TTCATCACTTCCAGCATTAA+TGG - chr1_3:33014487-33014506 Msa0114790:intron 35.0%
CTTGCTCATATTCATCTGTA+TGG + chr1_3:33014544-33014563 None:intergenic 35.0%
AATATGGTTGTAGATTGGGT+TGG + chr1_3:33014600-33014619 None:intergenic 35.0%
!! TTGTTGGCTAGAGGTAATTT+TGG + chr1_3:33014638-33014657 None:intergenic 35.0%
! TTGTTGTTATTGTTGGCTAG+AGG + chr1_3:33014647-33014666 None:intergenic 35.0%
AACAATGCAAGTACATTTGG+AGG - chr1_3:33014662-33014681 Msa0114790:intron 35.0%
GATAAAGGGTCTAAGCTATA+AGG + chr1_3:33014692-33014711 None:intergenic 35.0%
TGAGAGTTACTTATCTGAAG+TGG - chr1_3:33014826-33014845 Msa0114790:intron 35.0%
! GAGAGTTACTTATCTGAAGT+GGG - chr1_3:33014827-33014846 Msa0114790:intron 35.0%
TAGAAATTGTTCCACATGTG+GGG + chr1_3:33014857-33014876 None:intergenic 35.0%
! GATCATCTGCATCTAAAATG+TGG - chr1_3:33014941-33014960 Msa0114790:intron 35.0%
AGGATCCAATTTCGATGAAA+AGG - chr1_3:33015046-33015065 Msa0114790:intron 35.0%
! CAGACAAAAATAGGAGTACA+AGG - chr1_3:33015075-33015094 Msa0114790:intron 35.0%
TCCCGGTATATTAGAAAGAT+GGG - chr1_3:33015200-33015219 Msa0114790:CDS 35.0%
!!! AGTTCATTTTAGTTGGTGGA+TGG - chr1_3:33015251-33015270 Msa0114790:CDS 35.0%
GAGTAACATAAGCATGGTTG+AGG - chr1_3:33010164-33010183 Msa0114790:three_prime_UTR 40.0%
TACTAACCAGGAATATCCCA+TGG + chr1_3:33010315-33010334 None:intergenic 40.0%
TTGTACATGCAGGGGATTAT+AGG + chr1_3:33010670-33010689 None:intergenic 40.0%
ACTGCACAATTGTACATGCA+GGG + chr1_3:33010679-33010698 None:intergenic 40.0%
ATATACACATACACGCACCA+TGG - chr1_3:33011468-33011487 Msa0114790:intron 40.0%
GCTGAGAGAGACTTATCATT+AGG - chr1_3:33011835-33011854 Msa0114790:intron 40.0%
GAGAGAGACTTATCATTAGG+AGG - chr1_3:33011838-33011857 Msa0114790:intron 40.0%
GAAAAAGAAACTGTTAGGGG+TGG - chr1_3:33012522-33012541 Msa0114790:intron 40.0%
AGAGACCGTAAATATGCAAC+AGG - chr1_3:33013200-33013219 Msa0114790:intron 40.0%
GAGACCGTAAATATGCAACA+GGG - chr1_3:33013201-33013220 Msa0114790:intron 40.0%
GTAGCCCTGTTGCATATTTA+CGG + chr1_3:33013208-33013227 None:intergenic 40.0%
AACTGCATCAGGTTATTGGA+AGG - chr1_3:33013241-33013260 Msa0114790:intron 40.0%
TTATTGGAAGGCAACAGGAA+AGG - chr1_3:33013253-33013272 Msa0114790:intron 40.0%
GACTCGATGACCTTAATATG+GGG - chr1_3:33014076-33014095 Msa0114790:intron 40.0%
TAACTCTAAGTTCAAACCGG+TGG - chr1_3:33014195-33014214 Msa0114790:intron 40.0%
ATTCGGAGGGATCTAAAGAA+GGG + chr1_3:33014230-33014249 None:intergenic 40.0%
TATTCGGAGGGATCTAAAGA+AGG + chr1_3:33014231-33014250 None:intergenic 40.0%
!! AGGAAGATTGGGTTTTGTGT+AGG - chr1_3:33014393-33014412 Msa0114790:intron 40.0%
!! GGAAGATTGGGTTTTGTGTA+GGG - chr1_3:33014394-33014413 Msa0114790:intron 40.0%
CATCTGTATGGAATTGAGCT+TGG + chr1_3:33014532-33014551 None:intergenic 40.0%
!!! GGTTTGGTTTTGGGAAAACA+TGG + chr1_3:33014579-33014598 None:intergenic 40.0%
!!! GATTGGGTTGGTTTGGTTTT+GGG + chr1_3:33014588-33014607 None:intergenic 40.0%
!!! AGATTGGGTTGGTTTGGTTT+TGG + chr1_3:33014589-33014608 None:intergenic 40.0%
GCTTCAGCACCATATTACAA+CGG + chr1_3:33015021-33015040 None:intergenic 40.0%
! GTTCGCCTTTTCATCGAAAT+TGG + chr1_3:33015054-33015073 None:intergenic 40.0%
AGGCGAACACAGACAAAAAT+AGG - chr1_3:33015066-33015085 Msa0114790:intron 40.0%
TCTATCCACATGATATGTCC+CGG - chr1_3:33015183-33015202 Msa0114790:CDS 40.0%
ATATACCGGGACATATCATG+TGG + chr1_3:33015191-33015210 None:intergenic 40.0%
GTCCCGGTATATTAGAAAGA+TGG - chr1_3:33015199-33015218 Msa0114790:CDS 40.0%
CCCCATCTTTCTAATATACC+GGG + chr1_3:33015204-33015223 None:intergenic 40.0%
CCCGGTATATTAGAAAGATG+GGG - chr1_3:33015201-33015220 Msa0114790:CDS 40.0%
GCCCCATCTTTCTAATATAC+CGG + chr1_3:33015205-33015224 None:intergenic 40.0%
! GAAAGATGGGGCTTTGTAAT+TGG - chr1_3:33015213-33015232 Msa0114790:CDS 40.0%
CTAGGATGAAATCTGAACCC+TGG + chr1_3:33010201-33010220 None:intergenic 45.0%
CACACAAGCTCTTCATCTCT+AGG + chr1_3:33010219-33010238 None:intergenic 45.0%
ACCTTAACAAGTGTGAGCCA+TGG - chr1_3:33010295-33010314 Msa0114790:three_prime_UTR 45.0%
CCTTAACAAGTGTGAGCCAT+GGG - chr1_3:33010296-33010315 Msa0114790:three_prime_UTR 45.0%
CTGCACAATTGTACATGCAG+GGG + chr1_3:33010678-33010697 None:intergenic 45.0%
CACTGCACAATTGTACATGC+AGG + chr1_3:33010680-33010699 None:intergenic 45.0%
TAGAGATAGGTAGGTACAGG+TGG - chr1_3:33011279-33011298 Msa0114790:intron 45.0%
ACATACACGCACCATGGAAA+GGG - chr1_3:33011474-33011493 Msa0114790:intron 45.0%
ACTGTCTACATCCCTTTCCA+TGG + chr1_3:33011488-33011507 None:intergenic 45.0%
GAAAGGGATGTAGACAGTTG+AGG - chr1_3:33011490-33011509 Msa0114790:intron 45.0%
ACAAATCGTGCAACTGCATC+AGG - chr1_3:33013230-33013249 Msa0114790:intron 45.0%
GTGCAACTGCATCAGGTTAT+TGG - chr1_3:33013237-33013256 Msa0114790:intron 45.0%
TCAGGTTATTGGAAGGCAAC+AGG - chr1_3:33013248-33013267 Msa0114790:intron 45.0%
GACAGAGCTATCCTTCGTAA+GGG - chr1_3:33013275-33013294 Msa0114790:intron 45.0%
!! TATCAAGGAAGGGCACCTAA+AGG - chr1_3:33013332-33013351 Msa0114790:intron 45.0%
!! ATCAAGGAAGGGCACCTAAA+GGG - chr1_3:33013333-33013352 Msa0114790:intron 45.0%
TTTCGTATTGAGGGTCCTCA+TGG - chr1_3:33013383-33013402 Msa0114790:intron 45.0%
!! GAAATTTTAGGAGGGCCATG+AGG + chr1_3:33013401-33013420 None:intergenic 45.0%
TTTCCTGGTATGAATGAGGG+AGG - chr1_3:33013706-33013725 Msa0114790:intron 45.0%
TCGATGACCTTAATATGGGG+TGG - chr1_3:33014079-33014098 Msa0114790:intron 45.0%
ATGACCTTAATATGGGGTGG+TGG - chr1_3:33014082-33014101 Msa0114790:intron 45.0%
TGACCTTAATATGGGGTGGT+GGG - chr1_3:33014083-33014102 Msa0114790:intron 45.0%
AATCCCACCACCCCATATTA+AGG + chr1_3:33014089-33014108 None:intergenic 45.0%
AGAAGGGACAAATGTTCCAC+CGG + chr1_3:33014214-33014233 None:intergenic 45.0%
TGCTACAAAACCTCCAAGCA+TGG - chr1_3:33014439-33014458 Msa0114790:intron 45.0%
GCTACAAAACCTCCAAGCAT+GGG - chr1_3:33014440-33014459 Msa0114790:intron 45.0%
TCATAGCAACTACCCATGCT+TGG + chr1_3:33014455-33014474 None:intergenic 45.0%
GGTAGTTGCTATGATGACAC+AGG - chr1_3:33014461-33014480 Msa0114790:intron 45.0%
TGGGAAAACATGGAGAAGCA+GGG + chr1_3:33014569-33014588 None:intergenic 45.0%
TTGGGAAAACATGGAGAAGC+AGG + chr1_3:33014570-33014589 None:intergenic 45.0%
!! GGTTGTAGATTGGGTTGGTT+TGG + chr1_3:33014595-33014614 None:intergenic 45.0%
!!! AGCTTGGTGATGACCCTTTT+AGG + chr1_3:33014790-33014809 None:intergenic 45.0%
AAAGGGTCATCACCAAGCTT+AGG - chr1_3:33014791-33014810 Msa0114790:intron 45.0%
TCATCACCAAGCTTAGGTGA+AGG - chr1_3:33014797-33014816 Msa0114790:intron 45.0%
GAACTTCCTTCACCTAAGCT+TGG + chr1_3:33014806-33014825 None:intergenic 45.0%
!! TCTAAAATGTGGTGCTGCGA+CGG - chr1_3:33014952-33014971 Msa0114790:intron 45.0%
GATTCAGGTCCGGATTGAAA+AGG - chr1_3:33014980-33014999 Msa0114790:intron 45.0%
! ATATGGTGCTGAAGCTGTAG+AGG - chr1_3:33015026-33015045 Msa0114790:intron 45.0%
!! TATAACAAATAAAAAAATAT+TGG - chr1_3:33011318-33011337 Msa0114790:intron 5.0%
!! AAATAATATTATTTATACTT+AGG - chr1_3:33011342-33011361 Msa0114790:intron 5.0%
!!! AAAATATTTTTGATTAATTA+AGG + chr1_3:33011587-33011606 None:intergenic 5.0%
!!! TAATCAAAAATATTTTTATT+TGG - chr1_3:33011591-33011610 Msa0114790:intron 5.0%
!! ATAAAAAAATATTATATCAT+CGG + chr1_3:33012049-33012068 None:intergenic 5.0%
TTGAGGCAAAGCTACCACCA+GGG - chr1_3:33010181-33010200 Msa0114790:three_prime_UTR 50.0%
GGATGAAATCTGAACCCTGG+TGG + chr1_3:33010198-33010217 None:intergenic 50.0%
! CCCATGGCTCACACTTGTTA+AGG + chr1_3:33010299-33010318 None:intergenic 50.0%
TGTGAGCCATGGGATATTCC+TGG - chr1_3:33010306-33010325 Msa0114790:three_prime_UTR 50.0%
CACATACACGCACCATGGAA+AGG - chr1_3:33011473-33011492 Msa0114790:intron 50.0%
GGACAGAGCTATCCTTCGTA+AGG - chr1_3:33013274-33013293 Msa0114790:intron 50.0%
!! CAACAAGAGTGCCCTTACGA+AGG + chr1_3:33013289-33013308 None:intergenic 50.0%
!! CTTCGTAAGGGCACTCTTGT+TGG - chr1_3:33013287-33013306 Msa0114790:intron 50.0%
TTGCCTCCCTCATTCATACC+AGG + chr1_3:33013712-33013731 None:intergenic 50.0%
TAGCAACTACCCATGCTTGG+AGG + chr1_3:33014452-33014471 None:intergenic 50.0%
GTTGAGGCAAAGCTACCACC+AGG - chr1_3:33010180-33010199 Msa0114790:three_prime_UTR 55.0%
TGGTGCAGAAGCAGCATGTG+TGG - chr1_3:33013148-33013167 Msa0114790:intron 55.0%
GGTGCAGAAGCAGCATGTGT+GGG - chr1_3:33013149-33013168 Msa0114790:intron 55.0%
CAGAAGCAGCATGTGTGGGA+GGG - chr1_3:33013153-33013172 Msa0114790:intron 55.0%
CATGTGTGGGAGGGAAAGAG+TGG - chr1_3:33013162-33013181 Msa0114790:intron 55.0%
AAGTGGGTATGCCCCACATG+TGG - chr1_3:33014843-33014862 Msa0114790:intron 55.0%
GACGGTAGAGGATTCAGGTC+CGG - chr1_3:33014970-33014989 Msa0114790:intron 55.0%
GCAGAAGCAGCATGTGTGGG+AGG - chr1_3:33013152-33013171 Msa0114790:intron 60.0%
!! ATGTGGTGCTGCGACGGTAG+AGG - chr1_3:33014958-33014977 Msa0114790:intron 60.0%
GCTGCGACGGTAGAGGATTC+AGG - chr1_3:33014965-33014984 Msa0114790:intron 60.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 33010068 33015383 33010068 ID=Msa0114790;Name=Msa0114790
chr1_3 mRNA 33010068 33015383 33010068 ID=Msa0114790-mRNA-1;Parent=Msa0114790;Name=Msa0114790-mRNA-1;_AED=0.02;_eAED=0.02;_QI=94|1|1|1|1|1|3|506|307
chr1_3 exon 33010068 33011056 33010068 ID=Msa0114790-mRNA-1:exon:10424;Parent=Msa0114790-mRNA-1
chr1_3 exon 33012021 33012295 33012021 ID=Msa0114790-mRNA-1:exon:10423;Parent=Msa0114790-mRNA-1
chr1_3 exon 33015124 33015383 33015124 ID=Msa0114790-mRNA-1:exon:10422;Parent=Msa0114790-mRNA-1
chr1_3 five_prime_UTR 33015290 33015383 33015290 ID=Msa0114790-mRNA-1:five_prime_utr;Parent=Msa0114790-mRNA-1
chr1_3 CDS 33015124 33015289 33015124 ID=Msa0114790-mRNA-1:cds;Parent=Msa0114790-mRNA-1
chr1_3 CDS 33012021 33012295 33012021 ID=Msa0114790-mRNA-1:cds;Parent=Msa0114790-mRNA-1
chr1_3 CDS 33010574 33011056 33010574 ID=Msa0114790-mRNA-1:cds;Parent=Msa0114790-mRNA-1
chr1_3 three_prime_UTR 33010068 33010573 33010068 ID=Msa0114790-mRNA-1:three_prime_utr;Parent=Msa0114790-mRNA-1
Gene Sequence

>Msa0114790

ATGAGTAACATAAGCATGGTTGAGGCAAAGCTACCACCAGGGTTCAGATTTCATCCTAGAGATGAAGAGCTTGTGTGTGATTACTTGATGAAGAAGGTGACTCATAGTGATTCCTTTCTCATGATTGATGTTGACCTTAACAAGTGTGAGCCATGGGATATTCCTGAAGCAGCATGTGTGGGAGGGAAAGAGTGGTATTTCTATACACAAAGAGACCGTAAATATGCAACAGGGCTACGCACAAATCGTGCAACTGCATCAGGTTATTGGAAGGCAACAGGAAAGGACAGAGCTATCCTTCGTAAGGGCACTCTTGTTGGAATGAGAAAGACTTTAGTGTTCTATCAAGGAAGGGCACCTAAAGGGAGAAAAACTGAATGGGTTATGCATGAGTTTCGTATTGAGGGTCCTCATGGCCCTCCTAAAATTTCATCTTCTAAGGAAGATTGGGTTTTGTGTAGGGTTTTCTACAAAAACAGAGAAGTTGCTACAAAACCTCCAAGCATGGGTAGTTGCTATGATGACACAGGCTCTTCATCACTTCCAGCATTAATGGATTCTTACATAAGTTTTGACCAAGCTCAATTCCATACAGATGAATATGAGCAAGTGCCCTGCTTCTCCATGTTTTCCCAAAACCAAACCAACCCAATCTACAACCATATTACAACCAATATGGAACCAAAATTACCTCTAGCCAACAATAACAACAATGCAAGTACATTTGGAGGAGCACCTTATAGCTTAGACCCTTTATCATGTGATAGAAAAGTGTTGAAAGCTGTTTTGAGTCAACTATCAAAGATGGAAAGAAACCCTATTAATGATCAAAACCTAAAAGGGTCATCACCAAGCTTAGGTGAAGGAAGTTCTGAGAGTTACTTATCTGAAGTGGGTATGCCCCACATGTGGAACAATTTCTAA
Protein sequence

>Msa0114790

MSNISMVEAKLPPGFRFHPRDEELVCDYLMKKVTHSDSFLMIDVDLNKCEPWDIPEAACVGGKEWYFYTQRDRKYATGLRTNRATASGYWKATGKDRAILRKGTLVGMRKTLVFYQGRAPKGRKTEWVMHEFRIEGPHGPPKISSSKEDWVLCRVFYKNREVATKPPSMGSCYDDTGSSSLPALMDSYISFDQAQFHTDEYEQVPCFSMFSQNQTNPIYNHITTNMEPKLPLANNNNNASTFGGAPYSLDPLSCDRKVLKAVLSQLSKMERNPINDQNLKGSSPSLGEGSSESYLSEVGMPHMWNNF*