Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0219260 | XP_003596864.1 | 94.231 | 468 | 27 | 0 | 1 | 468 | 1 | 468 | 0.0 | 807 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0219260 | sp|Q5HZV9|PP1R7_RAT | 31.535 | 241 | 162 | 3 | 20 | 260 | 121 | 358 | 2.25e-24 | 107 |
| Msa0219260 | sp|Q5HZV9|PP1R7_RAT | 31.098 | 164 | 103 | 2 | 1 | 154 | 190 | 353 | 1.46e-12 | 72.4 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0219260 | G7IHH7 | 94.231 | 468 | 27 | 0 | 1 | 468 | 1 | 468 | 0.0 | 807 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0219260 | Msa0258890 | 0.957330 | 3.524423e-115 | -8.615850e-47 |
| Msa0219260 | Msa0271510 | 0.816219 | 6.191009e-52 | -8.615850e-47 |
| Msa0219260 | Msa0298320 | 0.819721 | 1.000740e-52 | -8.615850e-47 |
| Msa0219260 | Msa0336100 | 0.805910 | 1.062488e-49 | -8.615850e-47 |
| Msa0219260 | Msa1382960 | 0.824390 | 8.285134e-54 | -8.615850e-47 |
| Msa0219260 | Msa1453610 | 0.807527 | 4.839783e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0219260 | MtrunA17_Chr2g0321711 | 94.231 | 468 | 27 | 0 | 1 | 468 | 1 | 468 | 0.0 | 807 |
| Msa0219260 | MtrunA17_Chr8g0390081 | 29.114 | 237 | 134 | 6 | 19 | 252 | 94 | 299 | 6.40e-13 | 69.7 |
| Msa0219260 | MtrunA17_Chr5g0426251 | 33.929 | 168 | 105 | 4 | 97 | 260 | 418 | 583 | 2.46e-11 | 65.9 |
| Msa0219260 | MtrunA17_Chr8g0370111 | 26.971 | 241 | 164 | 7 | 37 | 269 | 285 | 521 | 8.65e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0219260 | AT5G22320.1 | 45.148 | 474 | 229 | 9 | 1 | 466 | 1 | 451 | 4.92e-114 | 343 |
| Msa0219260 | AT5G22320.2 | 43.249 | 474 | 222 | 10 | 1 | 466 | 1 | 435 | 2.88e-103 | 315 |
| Msa0219260 | AT5G19680.1 | 31.321 | 265 | 135 | 9 | 1 | 252 | 62 | 292 | 3.30e-14 | 73.9 |
| Msa0219260 | AT5G19680.1 | 32.857 | 140 | 83 | 2 | 37 | 171 | 193 | 326 | 1.31e-11 | 66.2 |
| Msa0219260 | AT4G35470.1 | 28.384 | 229 | 150 | 6 | 37 | 258 | 265 | 486 | 7.59e-11 | 64.7 |
| Msa0219260 | AT4G35470.2 | 28.384 | 229 | 150 | 6 | 37 | 258 | 265 | 486 | 7.83e-11 | 64.7 |
Find 118 sgRNAs with CRISPR-Local
Find 263 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTAGCCAGCTTCAATAAAT+TGG | 0.169541 | 2_1:+66776144 | Msa0219260:CDS |
| AGAAATTCATTTGAAGTAAT+TGG | 0.187992 | 2_1:-66780320 | None:intergenic |
| CCCATTCCAATTTCTGTTAC+TGG | 0.188491 | 2_1:-66779939 | None:intergenic |
| CATTGCATTTCTCCTTGTTC+AGG | 0.189521 | 2_1:+66780060 | Msa0219260:three_prime_UTR |
| GAATTGTGCATTAGTTCTTC+TGG | 0.203595 | 2_1:-66778975 | None:intergenic |
| AGACTCCACTTTATGCATTT+TGG | 0.207816 | 2_1:-66779907 | None:intergenic |
| TGCAAAATGGTCAGATATAA+AGG | 0.253542 | 2_1:+66779034 | Msa0219260:CDS |
| TTCTTGGTATCTTTATCTAT+TGG | 0.257179 | 2_1:-66779354 | None:intergenic |
| TCATCTCCAGTAACAGAAAT+TGG | 0.264149 | 2_1:+66779933 | Msa0219260:CDS |
| TCTTGCTCACAATGATATTA+AGG | 0.282764 | 2_1:+66778793 | Msa0219260:CDS |
| AAAGCTTCGGAATTTAGATT+TGG | 0.286348 | 2_1:+66778998 | Msa0219260:CDS |
| CAAGTGACCTTTCTCATTCT+TGG | 0.296468 | 2_1:-66779370 | None:intergenic |
| AAGAAAATTTAAACTCCCTT+TGG | 0.331012 | 2_1:-66780428 | None:intergenic |
| AAGCTTCGGAATTTAGATTT+GGG | 0.337577 | 2_1:+66778999 | Msa0219260:CDS |
| ACAAAATACTCAATAAATAA+TGG | 0.340042 | 2_1:-66780295 | None:intergenic |
| CAGATGTATACCATTACATT+TGG | 0.349903 | 2_1:-66780475 | None:intergenic |
| ACAGGTCATAACAAGGATAA+TGG | 0.368572 | 2_1:+66779543 | Msa0219260:CDS |
| GTGAATTGCACATCAGATTC+TGG | 0.371790 | 2_1:+66780218 | Msa0219260:three_prime_UTR |
| ACTTTCTCATTTGTAGCAAC+AGG | 0.381222 | 2_1:-66779190 | None:intergenic |
| GGTATCTTTATCTATTGGTT+TGG | 0.382169 | 2_1:-66779349 | None:intergenic |
| TAAATTGAGATTTCTCAGTT+TGG | 0.382838 | 2_1:-66779158 | None:intergenic |
| TTCCTCACTGCACTCATTCA+AGG | 0.388703 | 2_1:-66775916 | None:intergenic |
| GGAGAATAAATTAGAAAGCT+TGG | 0.390492 | 2_1:+66776348 | Msa0219260:CDS |
| ATAGACCCCACCTTCCTTCT+CGG | 0.391386 | 2_1:-66779508 | None:intergenic |
| ATTGCATTTCTCCTTGTTCA+GGG | 0.397484 | 2_1:+66780061 | Msa0219260:three_prime_UTR |
| GTTGATTTATTCTTCGTGTC+AGG | 0.403540 | 2_1:-66779603 | None:intergenic |
| CATCTGATCAAGTTTGCAAA+TGG | 0.405995 | 2_1:-66777992 | None:intergenic |
| CCTTTCACATTGTCAGATTG+AGG | 0.407813 | 2_1:+66778724 | Msa0219260:CDS |
| AATTGTGCATTAGTTCTTCT+GGG | 0.410918 | 2_1:-66778974 | None:intergenic |
| CCACCTGGGTTTAGCACAAA+TGG | 0.413148 | 2_1:-66780185 | None:intergenic |
| GCGTTGAATACTTGTAGCTT+TGG | 0.437925 | 2_1:-66779327 | None:intergenic |
| ATCTTGAAGCTGCTGACAAA+AGG | 0.439283 | 2_1:+66779448 | Msa0219260:CDS |
| CTCTCGAGGAGAATGTTAAT+AGG | 0.448873 | 2_1:+66779676 | Msa0219260:CDS |
| CTTTCACATTGTCAGATTGA+GGG | 0.449337 | 2_1:+66778725 | Msa0219260:CDS |
| GAAAGCTTGGAAGGAATTCA+AGG | 0.449690 | 2_1:+66776361 | Msa0219260:CDS |
| TTGGCACTCTTATGCTTGAC+AGG | 0.455417 | 2_1:-66779888 | None:intergenic |
| TACTCAATAAATAATGGAAA+AGG | 0.460616 | 2_1:-66780289 | None:intergenic |
| TGAATCGAACTCGGTACTCT+AGG | 0.462484 | 2_1:+66780131 | Msa0219260:three_prime_UTR |
| ATTTCAAATCCTTAGGCGCT+TGG | 0.462547 | 2_1:-66779842 | None:intergenic |
| TAATCTTCATCCAAATGTAA+TGG | 0.462717 | 2_1:+66780465 | Msa0219260:three_prime_UTR |
| TTTCATAGTAGTCATGCAAA+AGG | 0.463184 | 2_1:-66780380 | None:intergenic |
| GGAAGGTGGGGTCTATGATA+AGG | 0.467284 | 2_1:+66779515 | Msa0219260:CDS |
| AATAATGGAAAAGGCAAGAA+AGG | 0.468786 | 2_1:-66780280 | None:intergenic |
| TTTGAAGTGGTTATCAGTTG+TGG | 0.468829 | 2_1:+66776327 | Msa0219260:CDS |
| TGAAGACTGGAAATTGAACT+TGG | 0.471828 | 2_1:-66775993 | None:intergenic |
| TAATGCACAATTCAAAGCTT+CGG | 0.479074 | 2_1:+66778985 | Msa0219260:CDS |
| TGGCAAATGCAACAATATCT+TGG | 0.480404 | 2_1:+66780504 | Msa0219260:three_prime_UTR |
| TTCACATATTAGCCTCCACC+TGG | 0.481607 | 2_1:-66780200 | None:intergenic |
| CTCAATCTGACAATGTGAAA+GGG | 0.482918 | 2_1:-66778723 | None:intergenic |
| CTCACTAATTTCAAATCCTT+AGG | 0.490267 | 2_1:-66779849 | None:intergenic |
| TATGGTGTAAAAGGGATTGA+GGG | 0.493320 | 2_1:+66776294 | Msa0219260:intron |
| CATGCAAAAGGGGAGGGGAG+AGG | 0.494113 | 2_1:-66780368 | None:intergenic |
| TTCATAGTAGTCATGCAAAA+GGG | 0.494527 | 2_1:-66780379 | None:intergenic |
| AATGTCAGCAAATGAAGCTT+CGG | 0.495172 | 2_1:-66779763 | None:intergenic |
| GGAATAATGTGATTGCAAAA+TGG | 0.498927 | 2_1:+66779021 | Msa0219260:CDS |
| ACTGGAAATTGAACTTGGAT+TGG | 0.499943 | 2_1:-66775988 | None:intergenic |
| AATTGTTGTTACTTTCCAAA+GGG | 0.502368 | 2_1:+66780413 | Msa0219260:three_prime_UTR |
| GAGTGCCAAAATGCATAAAG+TGG | 0.507006 | 2_1:+66779902 | Msa0219260:CDS |
| GTCTATGATAAGGAAAATAC+AGG | 0.507147 | 2_1:+66779525 | Msa0219260:CDS |
| AAAGGACGACGGCAAGCCCT+CGG | 0.507847 | 2_1:+66779641 | Msa0219260:CDS |
| GTATGGTGTAAAAGGGATTG+AGG | 0.510413 | 2_1:+66776293 | Msa0219260:intron |
| GGCAAACATTACCTTTGTGA+TGG | 0.510475 | 2_1:-66778613 | None:intergenic |
| AAAGATACCAAGAATGAGAA+AGG | 0.511481 | 2_1:+66779363 | Msa0219260:CDS |
| CCAGTAACAGAAATTGGAAT+GGG | 0.514929 | 2_1:+66779939 | Msa0219260:CDS |
| GCTACAGAACCAAGCGCCTA+AGG | 0.515364 | 2_1:+66779833 | Msa0219260:CDS |
| GATCAGGAAAATCTGAATCA+TGG | 0.515970 | 2_1:+66779798 | Msa0219260:CDS |
| GGAAATTGAACTTGGATTGG+CGG | 0.520167 | 2_1:-66775985 | None:intergenic |
| ATGGTATACATCTGAACCAC+TGG | 0.522003 | 2_1:+66780484 | Msa0219260:three_prime_UTR |
| CAGTTCAACACAAAACTTGA+GGG | 0.525455 | 2_1:-66778759 | None:intergenic |
| AATAAATTAGAAAGCTTGGA+AGG | 0.526330 | 2_1:+66776352 | Msa0219260:CDS |
| CTGAGAAATCTCAATTTACA+AGG | 0.527846 | 2_1:+66779163 | Msa0219260:CDS |
| GCTGTCGTTCAATACTTGCT+CGG | 0.536067 | 2_1:-66775958 | None:intergenic |
| CAATAATCTCACTTCACTTG+AGG | 0.539721 | 2_1:+66776186 | Msa0219260:CDS |
| CCTCAATCTGACAATGTGAA+AGG | 0.540601 | 2_1:-66778724 | None:intergenic |
| ATGAAAGAATTGAATACTCT+CGG | 0.542671 | 2_1:+66778012 | Msa0219260:CDS |
| CGGAAAGAGCTTTGTGAGTG+AGG | 0.545351 | 2_1:-66776016 | None:intergenic |
| AAGAGACAAACATCACAAGT+AGG | 0.545697 | 2_1:-66780242 | None:intergenic |
| GTGAACCAGGTACTAAATGC+AGG | 0.545787 | 2_1:+66777732 | Msa0219260:intron |
| TCCAGTAACAGAAATTGGAA+TGG | 0.551066 | 2_1:+66779938 | Msa0219260:CDS |
| AAATGAGAAAGTTACAAGAA+AGG | 0.556080 | 2_1:+66779201 | Msa0219260:CDS |
| GAATCGAACTCGGTACTCTA+GGG | 0.559753 | 2_1:+66780132 | Msa0219260:three_prime_UTR |
| GTAGTCATGCAAAAGGGGAG+GGG | 0.566771 | 2_1:-66780373 | None:intergenic |
| TGAGTCAGTAAGAAAACAGT+AGG | 0.568093 | 2_1:-66780023 | None:intergenic |
| AGTAGTCATGCAAAAGGGGA+GGG | 0.568334 | 2_1:-66780374 | None:intergenic |
| AATTGGCGAGGCTCTGAAGA+AGG | 0.568851 | 2_1:+66778584 | Msa0219260:CDS |
| AGCTTCGGAATTTAGATTTG+GGG | 0.572795 | 2_1:+66779000 | Msa0219260:CDS |
| TTTGTGAGTGAGGTGAAGAC+TGG | 0.573523 | 2_1:-66776006 | None:intergenic |
| AAATTGTTGTTACTTTCCAA+AGG | 0.579314 | 2_1:+66780412 | Msa0219260:three_prime_UTR |
| AACTGTTGATGTATCCGAGA+AGG | 0.580615 | 2_1:+66779494 | Msa0219260:CDS |
| GATGTATCCGAGAAGGAAGG+TGG | 0.583676 | 2_1:+66779501 | Msa0219260:CDS |
| AGAGACAAACATCACAAGTA+GGG | 0.589548 | 2_1:-66780241 | None:intergenic |
| AACTGTGCTCACCCTGAACA+AGG | 0.591893 | 2_1:-66780072 | None:intergenic |
| AGAGGAGACATAAAACTTAG+TGG | 0.592192 | 2_1:-66780350 | None:intergenic |
| GATATTGTTGCATTTGCCAG+TGG | 0.603591 | 2_1:-66780500 | None:intergenic |
| AGATCATGTCGATCAAAATG+AGG | 0.604619 | 2_1:+66779419 | Msa0219260:CDS |
| CACCATTCAAAATCAGTGCA+CGG | 0.606464 | 2_1:-66777803 | None:intergenic |
| TTTGTGCTAAACCCAGGTGG+AGG | 0.613343 | 2_1:+66780188 | Msa0219260:three_prime_UTR |
| TCATAGTAGTCATGCAAAAG+GGG | 0.614238 | 2_1:-66780378 | None:intergenic |
| GGGCATGTGTTAATTTGAAG+TGG | 0.617171 | 2_1:+66776314 | Msa0219260:CDS |
| GAATGGGAGGTTCATCAACA+TGG | 0.618002 | 2_1:+66779955 | Msa0219260:CDS |
| AAAGAAGAATCGAAAGAACA+AGG | 0.618334 | 2_1:+66779710 | Msa0219260:CDS |
| ATGTATCCGAGAAGGAAGGT+GGG | 0.618544 | 2_1:+66779502 | Msa0219260:CDS |
| TAGTAGTCATGCAAAAGGGG+AGG | 0.622420 | 2_1:-66780375 | None:intergenic |
| TCCTATCCGTAAAATTGGCG+AGG | 0.623359 | 2_1:+66778572 | Msa0219260:CDS |
| TGATCAGTATGAATCGAACT+CGG | 0.625560 | 2_1:+66780122 | Msa0219260:three_prime_UTR |
| GGAAAATACAGGTCATAACA+AGG | 0.632189 | 2_1:+66779536 | Msa0219260:CDS |
| TCAGTTCAACACAAAACTTG+AGG | 0.639929 | 2_1:-66778760 | None:intergenic |
| GTTGATGTATCCGAGAAGGA+AGG | 0.641292 | 2_1:+66779498 | Msa0219260:CDS |
| GTAACAGAAATTGGAATGGG+AGG | 0.647412 | 2_1:+66779942 | Msa0219260:CDS |
| TCACATATTAGCCTCCACCT+GGG | 0.660002 | 2_1:-66780199 | None:intergenic |
| TGTATCCGAGAAGGAAGGTG+GGG | 0.665884 | 2_1:+66779503 | Msa0219260:CDS |
| ATTCAAAATCAGTGCACGGA+GGG | 0.667546 | 2_1:-66777799 | None:intergenic |
| AAACCATTTGTGCTAAACCC+AGG | 0.672861 | 2_1:+66780182 | Msa0219260:three_prime_UTR |
| GAAGGTGAAATCCATCACAA+AGG | 0.679265 | 2_1:+66778602 | Msa0219260:CDS |
| CCATTTGTGCTAAACCCAGG+TGG | 0.709050 | 2_1:+66780185 | Msa0219260:three_prime_UTR |
| CAGGAAAATCTGAATCATGG+TGG | 0.716042 | 2_1:+66779801 | Msa0219260:CDS |
| CATTCAAAATCAGTGCACGG+AGG | 0.728165 | 2_1:-66777800 | None:intergenic |
| TGCCTTGAATGAGTGCAGTG+AGG | 0.768971 | 2_1:+66775914 | Msa0219260:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAAGTTAAGATTTTTTA+GGG | - | chr2_1:66776095-66776114 | None:intergenic | 10.0% |
| !!! | AAAAAAAGTTAAGATTTTTT+AGG | - | chr2_1:66776096-66776115 | None:intergenic | 10.0% |
| !! | AAAAAATAAACTTAAATCTA+TGG | + | chr2_1:66777755-66777774 | Msa0219260:CDS | 10.0% |
| !! | TTGAAAGTTATGAAAAAAAT+TGG | + | chr2_1:66776237-66776256 | Msa0219260:intron | 15.0% |
| !!! | TTGATTGTATTTTATATGTA+TGG | + | chr2_1:66776276-66776295 | Msa0219260:intron | 15.0% |
| !!! | TATTTCTATTTCTATTTCTA+TGG | + | chr2_1:66776747-66776766 | Msa0219260:intron | 15.0% |
| !!! | ATTTCTATTTCTATTTCTAT+GGG | + | chr2_1:66776748-66776767 | Msa0219260:intron | 15.0% |
| !!! | GTTTAAAAATTATTTTACGT+TGG | - | chr2_1:66776792-66776811 | None:intergenic | 15.0% |
| !! | ACAATAAAAATAGAGTTTAA+TGG | - | chr2_1:66776944-66776963 | None:intergenic | 15.0% |
| !!! | AAACTCTATTTTTATTGTTA+TGG | + | chr2_1:66776946-66776965 | Msa0219260:intron | 15.0% |
| !! | ACAAAATACTCAATAAATAA+TGG | - | chr2_1:66780298-66780317 | None:intergenic | 15.0% |
| !!! | AAATATCTTTTGATTATACA+TGG | - | chr2_1:66780533-66780552 | None:intergenic | 15.0% |
| !!! | TTTTTAGGGTTTTAACAAAA+GGG | - | chr2_1:66776081-66776100 | None:intergenic | 20.0% |
| !!! | TTTTTTAGGGTTTTAACAAA+AGG | - | chr2_1:66776082-66776101 | None:intergenic | 20.0% |
| !! | TATGAAAAAAATTGGAACTT+TGG | + | chr2_1:66776245-66776264 | Msa0219260:intron | 20.0% |
| !!! | TTTTATATGTATGGTGTAAA+AGG | + | chr2_1:66776285-66776304 | Msa0219260:intron | 20.0% |
| !! | TTTATATGTATGGTGTAAAA+GGG | + | chr2_1:66776286-66776305 | Msa0219260:intron | 20.0% |
| !!! | TAAAAATTATTTTACGTTGG+CGG | - | chr2_1:66776789-66776808 | None:intergenic | 20.0% |
| !! | ATGTTTAATAAAGCGTATTA+TGG | + | chr2_1:66777472-66777491 | Msa0219260:intron | 20.0% |
| !! | AGTATATTATTCTGAACATA+TGG | - | chr2_1:66777616-66777635 | None:intergenic | 20.0% |
| !! | TTGTAACAAAGTATAAACAT+AGG | - | chr2_1:66777664-66777683 | None:intergenic | 20.0% |
| !!! | TTTGAAATGCAAACTATTTT+TGG | + | chr2_1:66778473-66778492 | Msa0219260:intron | 20.0% |
| !! | TATTCAAAAATTATTTGAGC+TGG | - | chr2_1:66778523-66778542 | None:intergenic | 20.0% |
| !!! | TACTCAATAAATAATGGAAA+AGG | - | chr2_1:66780292-66780311 | None:intergenic | 20.0% |
| !!! | AGAAATTCATTTGAAGTAAT+TGG | - | chr2_1:66780323-66780342 | None:intergenic | 20.0% |
| !!! | TTTTAGGGTTTTAACAAAAG+GGG | - | chr2_1:66776080-66776099 | None:intergenic | 25.0% |
| ! | AATAAATTAGAAAGCTTGGA+AGG | + | chr2_1:66776352-66776371 | Msa0219260:CDS | 25.0% |
| ! | TTTATATTAACAAAGCAGCT+AGG | - | chr2_1:66776410-66776429 | None:intergenic | 25.0% |
| ! | CTACACATACATATAGAATA+AGG | - | chr2_1:66776470-66776489 | None:intergenic | 25.0% |
| ! | TATTATTCATAAGCTTGTCA+AGG | - | chr2_1:66776668-66776687 | None:intergenic | 25.0% |
| ! | AATAGAAATATAGCACGTTT+AGG | - | chr2_1:66776737-66776756 | None:intergenic | 25.0% |
| !!! | TTCTATTTCTATGGGAAAAT+AGG | + | chr2_1:66776756-66776775 | Msa0219260:intron | 25.0% |
| !! | AAATTATTTGGTGGAATACA+CGG | - | chr2_1:66776831-66776850 | None:intergenic | 25.0% |
| ! | GAGAAATAGTTAATTCCAAT+TGG | + | chr2_1:66776880-66776899 | Msa0219260:intron | 25.0% |
| !! | TATGATTGATTGTGATTTGT+TGG | + | chr2_1:66777087-66777106 | Msa0219260:intron | 25.0% |
| ! | TTGAGATTAAAGCTCATTAA+TGG | - | chr2_1:66777213-66777232 | None:intergenic | 25.0% |
| !! | TAATGAGCTTTAATCTCAAA+TGG | + | chr2_1:66777214-66777233 | Msa0219260:intron | 25.0% |
| ! | ATGGCTTATAGAAATTATCT+TGG | + | chr2_1:66777233-66777252 | Msa0219260:intron | 25.0% |
| ! | TAATAAAGCGTATTATGGTT+AGG | + | chr2_1:66777477-66777496 | Msa0219260:intron | 25.0% |
| ! | AATAAAGCGTATTATGGTTA+GGG | + | chr2_1:66777478-66777497 | Msa0219260:intron | 25.0% |
| ! | TTCAACTTTCAAAATAGATG+AGG | - | chr2_1:66777855-66777874 | None:intergenic | 25.0% |
| ! | ATGAAAGAATTGAATACTCT+CGG | + | chr2_1:66778012-66778031 | Msa0219260:CDS | 25.0% |
| ! | ATTCAAACTGTCTTGATATA+AGG | + | chr2_1:66778340-66778359 | Msa0219260:intron | 25.0% |
| ! | AAAAATCCTATCCGTAAAAT+TGG | + | chr2_1:66778567-66778586 | Msa0219260:CDS | 25.0% |
| ! | AAATAACTAATGAGCACTAA+AGG | - | chr2_1:66778655-66778674 | None:intergenic | 25.0% |
| !!! | TTTTTGATTCTACATGCTTT+TGG | + | chr2_1:66778840-66778859 | Msa0219260:intron | 25.0% |
| ! | TAAATTGAGATTTCTCAGTT+TGG | - | chr2_1:66779161-66779180 | None:intergenic | 25.0% |
| ! | AAATGAGAAAGTTACAAGAA+AGG | + | chr2_1:66779201-66779220 | Msa0219260:CDS | 25.0% |
| !! | TTTTGAACCAAAAAAAGCAA+GGG | - | chr2_1:66779231-66779250 | None:intergenic | 25.0% |
| !! | ATTTTGAACCAAAAAAAGCA+AGG | - | chr2_1:66779232-66779251 | None:intergenic | 25.0% |
| ! | TTCTTGGTATCTTTATCTAT+TGG | - | chr2_1:66779357-66779376 | None:intergenic | 25.0% |
| !!! | AGTTTCCTTTCTTTTTTTAC+TGG | - | chr2_1:66779478-66779497 | None:intergenic | 25.0% |
| !!! | AAATTGTTGTTACTTTCCAA+AGG | + | chr2_1:66780412-66780431 | Msa0219260:three_prime_UTR | 25.0% |
| !!! | AATTGTTGTTACTTTCCAAA+GGG | + | chr2_1:66780413-66780432 | Msa0219260:three_prime_UTR | 25.0% |
| ! | AAGAAAATTTAAACTCCCTT+TGG | - | chr2_1:66780431-66780450 | None:intergenic | 25.0% |
| ! | TAATCTTCATCCAAATGTAA+TGG | + | chr2_1:66780465-66780484 | Msa0219260:three_prime_UTR | 25.0% |
| TTAATCTTTGTTCATTTCCC+AGG | + | chr2_1:66776114-66776133 | Msa0219260:intron | 30.0% | |
| ! | CTTTTCCAATTTATTGAAGC+TGG | - | chr2_1:66776152-66776171 | None:intergenic | 30.0% |
| GGAGAATAAATTAGAAAGCT+TGG | + | chr2_1:66776348-66776367 | Msa0219260:CDS | 30.0% | |
| ATATGTATGTGTAGCTTAGA+AGG | + | chr2_1:66776476-66776495 | Msa0219260:intron | 30.0% | |
| ! | TGATAGCTTTTCTTGTGTTA+AGG | + | chr2_1:66776514-66776533 | Msa0219260:intron | 30.0% |
| ! | GATAGCTTTTCTTGTGTTAA+GGG | + | chr2_1:66776515-66776534 | Msa0219260:intron | 30.0% |
| AAAAATAAGCCAATCCAAAC+AGG | - | chr2_1:66776541-66776560 | None:intergenic | 30.0% | |
| AAAACATAACGCAATCCAAA+CGG | + | chr2_1:66776709-66776728 | Msa0219260:intron | 30.0% | |
| GGATATAGCAAATTATTTGG+TGG | - | chr2_1:66776840-66776859 | None:intergenic | 30.0% | |
| GTGGGATATAGCAAATTATT+TGG | - | chr2_1:66776843-66776862 | None:intergenic | 30.0% | |
| AAACCAAAGTTGTATGAAGA+AGG | + | chr2_1:66777144-66777163 | Msa0219260:intron | 30.0% | |
| ! | CAAGTGGAATTGTTTAGTTT+CGG | + | chr2_1:66777268-66777287 | Msa0219260:intron | 30.0% |
| AGTACACAAAAATACTTCAC+TGG | - | chr2_1:66777315-66777334 | None:intergenic | 30.0% | |
| !! | GTGAAGTATTTTTGTGTACT+TGG | + | chr2_1:66777315-66777334 | Msa0219260:intron | 30.0% |
| AAACTATAAACTTGAGCACA+TGG | - | chr2_1:66777399-66777418 | None:intergenic | 30.0% | |
| TTATTCTGAACATATGGATG+TGG | - | chr2_1:66777610-66777629 | None:intergenic | 30.0% | |
| ! | AAACAAGAGATTTTGTAAGC+TGG | + | chr2_1:66778251-66778270 | Msa0219260:intron | 30.0% |
| TTGCATTTCAAACATACAAC+AGG | - | chr2_1:66778465-66778484 | None:intergenic | 30.0% | |
| ACCATCAGCAAGATATTATT+TGG | - | chr2_1:66778499-66778518 | None:intergenic | 30.0% | |
| ATTACTCATAATTCCTCTTC+TGG | + | chr2_1:66778690-66778709 | Msa0219260:intron | 30.0% | |
| TCTTGCTCACAATGATATTA+AGG | + | chr2_1:66778793-66778812 | Msa0219260:CDS | 30.0% | |
| AAAGCAAAGTCACGAATTTA+AGG | - | chr2_1:66778823-66778842 | None:intergenic | 30.0% | |
| !!! | TGCTTTTGGAATGTTTAATG+TGG | + | chr2_1:66778854-66778873 | Msa0219260:intron | 30.0% |
| ! | TACACTATTGTGCTAACTTT+TGG | + | chr2_1:66778939-66778958 | Msa0219260:intron | 30.0% |
| ! | AATTGTGCATTAGTTCTTCT+GGG | - | chr2_1:66778977-66778996 | None:intergenic | 30.0% |
| TAATGCACAATTCAAAGCTT+CGG | + | chr2_1:66778985-66779004 | Msa0219260:CDS | 30.0% | |
| AAAGCTTCGGAATTTAGATT+TGG | + | chr2_1:66778998-66779017 | Msa0219260:CDS | 30.0% | |
| AAGCTTCGGAATTTAGATTT+GGG | + | chr2_1:66778999-66779018 | Msa0219260:CDS | 30.0% | |
| GGAATAATGTGATTGCAAAA+TGG | + | chr2_1:66779021-66779040 | Msa0219260:CDS | 30.0% | |
| TGCAAAATGGTCAGATATAA+AGG | + | chr2_1:66779034-66779053 | Msa0219260:CDS | 30.0% | |
| AGATATAAAGGTTTGTCATC+TGG | + | chr2_1:66779046-66779065 | Msa0219260:intron | 30.0% | |
| CTGAGAAATCTCAATTTACA+AGG | + | chr2_1:66779163-66779182 | Msa0219260:CDS | 30.0% | |
| ATCATACACATGGTAGTTTA+AGG | - | chr2_1:66779285-66779304 | None:intergenic | 30.0% | |
| AATCTGTAACATCATACACA+TGG | - | chr2_1:66779295-66779314 | None:intergenic | 30.0% | |
| ! | GGTATCTTTATCTATTGGTT+TGG | - | chr2_1:66779352-66779371 | None:intergenic | 30.0% |
| AAAGATACCAAGAATGAGAA+AGG | + | chr2_1:66779363-66779382 | Msa0219260:CDS | 30.0% | |
| TGAAAAATCATGAGCATCAT+CGG | - | chr2_1:66779397-66779416 | None:intergenic | 30.0% | |
| GAAGTCCAGTAAAAAAAGAA+AGG | + | chr2_1:66779470-66779489 | Msa0219260:CDS | 30.0% | |
| GTCTATGATAAGGAAAATAC+AGG | + | chr2_1:66779525-66779544 | Msa0219260:CDS | 30.0% | |
| AAAAAGAAAGACAAACTCAC+AGG | + | chr2_1:66779570-66779589 | Msa0219260:CDS | 30.0% | |
| AACGAAGAACAAGCTAAAAA+AGG | + | chr2_1:66779623-66779642 | Msa0219260:CDS | 30.0% | |
| AAAGAAGAATCGAAAGAACA+AGG | + | chr2_1:66779710-66779729 | Msa0219260:CDS | 30.0% | |
| ! | TGCTGACATTTTTAACATCA+AGG | + | chr2_1:66779776-66779795 | Msa0219260:CDS | 30.0% |
| ! | CATTTTTAACATCAAGGATC+AGG | + | chr2_1:66779782-66779801 | Msa0219260:CDS | 30.0% |
| CTCACTAATTTCAAATCCTT+AGG | - | chr2_1:66779852-66779871 | None:intergenic | 30.0% | |
| ! | AATAATGGAAAAGGCAAGAA+AGG | - | chr2_1:66780283-66780302 | None:intergenic | 30.0% |
| TTCATAGTAGTCATGCAAAA+GGG | - | chr2_1:66780382-66780401 | None:intergenic | 30.0% | |
| TTTCATAGTAGTCATGCAAA+AGG | - | chr2_1:66780383-66780402 | None:intergenic | 30.0% | |
| CAGATGTATACCATTACATT+TGG | - | chr2_1:66780478-66780497 | None:intergenic | 30.0% | |
| ACTGGAAATTGAACTTGGAT+TGG | - | chr2_1:66775991-66776010 | None:intergenic | 35.0% | |
| TGAAGACTGGAAATTGAACT+TGG | - | chr2_1:66775996-66776015 | None:intergenic | 35.0% | |
| GGTTTAGAGAAAAGAAAAGG+GGG | - | chr2_1:66776059-66776078 | None:intergenic | 35.0% | |
| GGGTTTAGAGAAAAGAAAAG+GGG | - | chr2_1:66776060-66776079 | None:intergenic | 35.0% | |
| GGGGTTTAGAGAAAAGAAAA+GGG | - | chr2_1:66776061-66776080 | None:intergenic | 35.0% | |
| AGGGGTTTAGAGAAAAGAAA+AGG | - | chr2_1:66776062-66776081 | None:intergenic | 35.0% | |
| CTTAGCCAGCTTCAATAAAT+TGG | + | chr2_1:66776144-66776163 | Msa0219260:CDS | 35.0% | |
| CAATAATCTCACTTCACTTG+AGG | + | chr2_1:66776186-66776205 | Msa0219260:CDS | 35.0% | |
| TATGGTGTAAAAGGGATTGA+GGG | + | chr2_1:66776294-66776313 | Msa0219260:intron | 35.0% | |
| ! | TTTGAAGTGGTTATCAGTTG+TGG | + | chr2_1:66776327-66776346 | Msa0219260:CDS | 35.0% |
| AAACATAACGCAATCCAAAC+GGG | + | chr2_1:66776710-66776729 | Msa0219260:intron | 35.0% | |
| CCGTATCATACTCTTAAAGT+GGG | - | chr2_1:66776861-66776880 | None:intergenic | 35.0% | |
| ! | CCCACTTTAAGAGTATGATA+CGG | + | chr2_1:66776858-66776877 | Msa0219260:intron | 35.0% |
| TCCGTATCATACTCTTAAAG+TGG | - | chr2_1:66776862-66776881 | None:intergenic | 35.0% | |
| AGTTAATTCCAATTGGATGC+TGG | + | chr2_1:66776887-66776906 | Msa0219260:intron | 35.0% | |
| ! | ATTTTACACCAGCATCCAAT+TGG | - | chr2_1:66776898-66776917 | None:intergenic | 35.0% |
| TTTAACGATCTGACTATCTG+AGG | - | chr2_1:66777029-66777048 | None:intergenic | 35.0% | |
| TGACCTTCTTCATACAACTT+TGG | - | chr2_1:66777150-66777169 | None:intergenic | 35.0% | |
| AAGTTGTATGAAGAAGGTCA+TGG | + | chr2_1:66777150-66777169 | Msa0219260:intron | 35.0% | |
| AACTAAACAATTCCACTTGG+TGG | - | chr2_1:66777267-66777286 | None:intergenic | 35.0% | |
| CGAAACTAAACAATTCCACT+TGG | - | chr2_1:66777270-66777289 | None:intergenic | 35.0% | |
| TTTATACGATCATGTGAACC+AGG | + | chr2_1:66777719-66777738 | Msa0219260:intron | 35.0% | |
| ! | TTTTTCCTGCATTTAGTACC+TGG | - | chr2_1:66777740-66777759 | None:intergenic | 35.0% |
| ACTTTCAAAATAGATGAGGC+TGG | - | chr2_1:66777851-66777870 | None:intergenic | 35.0% | |
| CATCTGATCAAGTTTGCAAA+TGG | - | chr2_1:66777995-66778014 | None:intergenic | 35.0% | |
| !! | AGTCTGAAAAAGATGGACTA+TGG | - | chr2_1:66778108-66778127 | None:intergenic | 35.0% |
| TCGCTAAAGTCTGAAAAAGA+TGG | - | chr2_1:66778115-66778134 | None:intergenic | 35.0% | |
| CTCTTCTTATAAAACCCCTT+GGG | - | chr2_1:66778379-66778398 | None:intergenic | 35.0% | |
| GCCAAATAATATCTTGCTGA+TGG | + | chr2_1:66778495-66778514 | Msa0219260:intron | 35.0% | |
| CTCAATCTGACAATGTGAAA+GGG | - | chr2_1:66778726-66778745 | None:intergenic | 35.0% | |
| CTTTCACATTGTCAGATTGA+GGG | + | chr2_1:66778725-66778744 | Msa0219260:CDS | 35.0% | |
| CAGTTCAACACAAAACTTGA+GGG | - | chr2_1:66778762-66778781 | None:intergenic | 35.0% | |
| TCAGTTCAACACAAAACTTG+AGG | - | chr2_1:66778763-66778782 | None:intergenic | 35.0% | |
| ! | GAATTGTGCATTAGTTCTTC+TGG | - | chr2_1:66778978-66778997 | None:intergenic | 35.0% |
| AGCTTCGGAATTTAGATTTG+GGG | + | chr2_1:66779000-66779019 | Msa0219260:CDS | 35.0% | |
| AGACAACGATAAAACGTTGT+TGG | - | chr2_1:66779079-66779098 | None:intergenic | 35.0% | |
| ! | CAATACAAGATGAAGGTACA+TGG | - | chr2_1:66779113-66779132 | None:intergenic | 35.0% |
| ACAGTTGCAATACAAGATGA+AGG | - | chr2_1:66779120-66779139 | None:intergenic | 35.0% | |
| TCATCTTGTATTGCAACTGT+AGG | + | chr2_1:66779120-66779139 | Msa0219260:intron | 35.0% | |
| ACTTTCTCATTTGTAGCAAC+AGG | - | chr2_1:66779193-66779212 | None:intergenic | 35.0% | |
| AGATCATGTCGATCAAAATG+AGG | + | chr2_1:66779419-66779438 | Msa0219260:CDS | 35.0% | |
| GGAAAATACAGGTCATAACA+AGG | + | chr2_1:66779536-66779555 | Msa0219260:CDS | 35.0% | |
| ACAGGTCATAACAAGGATAA+TGG | + | chr2_1:66779543-66779562 | Msa0219260:CDS | 35.0% | |
| ! | GTTGATTTATTCTTCGTGTC+AGG | - | chr2_1:66779606-66779625 | None:intergenic | 35.0% |
| AACAAGCTAAAAAAGGACGA+CGG | + | chr2_1:66779630-66779649 | Msa0219260:CDS | 35.0% | |
| AATGTCAGCAAATGAAGCTT+CGG | - | chr2_1:66779766-66779785 | None:intergenic | 35.0% | |
| GATCAGGAAAATCTGAATCA+TGG | + | chr2_1:66779798-66779817 | Msa0219260:CDS | 35.0% | |
| ! | AGACTCCACTTTATGCATTT+TGG | - | chr2_1:66779910-66779929 | None:intergenic | 35.0% |
| TCATCTCCAGTAACAGAAAT+TGG | + | chr2_1:66779933-66779952 | Msa0219260:CDS | 35.0% | |
| TCCAGTAACAGAAATTGGAA+TGG | + | chr2_1:66779938-66779957 | Msa0219260:CDS | 35.0% | |
| CCAGTAACAGAAATTGGAAT+GGG | + | chr2_1:66779939-66779958 | Msa0219260:CDS | 35.0% | |
| !! | CAGTAGGTTTTTAAGCATAG+CGG | - | chr2_1:66780010-66780029 | None:intergenic | 35.0% |
| TGAGTCAGTAAGAAAACAGT+AGG | - | chr2_1:66780026-66780045 | None:intergenic | 35.0% | |
| ATTGCATTTCTCCTTGTTCA+GGG | + | chr2_1:66780061-66780080 | Msa0219260:three_prime_UTR | 35.0% | |
| TGATCAGTATGAATCGAACT+CGG | + | chr2_1:66780122-66780141 | Msa0219260:three_prime_UTR | 35.0% | |
| AGAGACAAACATCACAAGTA+GGG | - | chr2_1:66780244-66780263 | None:intergenic | 35.0% | |
| AAGAGACAAACATCACAAGT+AGG | - | chr2_1:66780245-66780264 | None:intergenic | 35.0% | |
| AGAGGAGACATAAAACTTAG+TGG | - | chr2_1:66780353-66780372 | None:intergenic | 35.0% | |
| TCATAGTAGTCATGCAAAAG+GGG | - | chr2_1:66780381-66780400 | None:intergenic | 35.0% | |
| TGGCAAATGCAACAATATCT+TGG | + | chr2_1:66780504-66780523 | Msa0219260:three_prime_UTR | 35.0% | |
| ! | GGAAATTGAACTTGGATTGG+CGG | - | chr2_1:66775988-66776007 | None:intergenic | 40.0% |
| TTAGAGAAAAGAAAAGGGGG+TGG | - | chr2_1:66776056-66776075 | None:intergenic | 40.0% | |
| GTATGGTGTAAAAGGGATTG+AGG | + | chr2_1:66776293-66776312 | Msa0219260:intron | 40.0% | |
| ! | GGGCATGTGTTAATTTGAAG+TGG | + | chr2_1:66776314-66776333 | Msa0219260:CDS | 40.0% |
| GAAAGCTTGGAAGGAATTCA+AGG | + | chr2_1:66776361-66776380 | Msa0219260:CDS | 40.0% | |
| GTGGAATACACGGTTACTAT+TGG | - | chr2_1:66776821-66776840 | None:intergenic | 40.0% | |
| ! | AATTCCACTTGGTGGCAATT+TGG | - | chr2_1:66777259-66777278 | None:intergenic | 40.0% |
| GTAGAAACCTTTCATCTCAC+AGG | + | chr2_1:66777440-66777459 | Msa0219260:intron | 40.0% | |
| TGTTAAGCTTGTACAGAGAG+TGG | + | chr2_1:66777514-66777533 | Msa0219260:intron | 40.0% | |
| ! | TGCTGAGTTATTTCCCGAAA+CGG | + | chr2_1:66777542-66777561 | Msa0219260:intron | 40.0% |
| AAATGAAGAATCCCCGTTTC+GGG | - | chr2_1:66777558-66777577 | None:intergenic | 40.0% | |
| GAAATGAAGAATCCCCGTTT+CGG | - | chr2_1:66777559-66777578 | None:intergenic | 40.0% | |
| ATTCAAAATCAGTGCACGGA+GGG | - | chr2_1:66777802-66777821 | None:intergenic | 40.0% | |
| CACCATTCAAAATCAGTGCA+CGG | - | chr2_1:66777806-66777825 | None:intergenic | 40.0% | |
| TGCTGTGCTTTCATCACAAT+AGG | + | chr2_1:66778150-66778169 | Msa0219260:intron | 40.0% | |
| AGGATCAACAGTATTTCCCA+AGG | + | chr2_1:66778360-66778379 | Msa0219260:intron | 40.0% | |
| GGATCAACAGTATTTCCCAA+GGG | + | chr2_1:66778361-66778380 | Msa0219260:intron | 40.0% | |
| GATCAACAGTATTTCCCAAG+GGG | + | chr2_1:66778362-66778381 | Msa0219260:intron | 40.0% | |
| CCTCTTCTTATAAAACCCCT+TGG | - | chr2_1:66778380-66778399 | None:intergenic | 40.0% | |
| !! | CCAAGGGGTTTTATAAGAAG+AGG | + | chr2_1:66778377-66778396 | Msa0219260:intron | 40.0% |
| !! | AGGGGTTTTATAAGAAGAGG+AGG | + | chr2_1:66778380-66778399 | Msa0219260:intron | 40.0% |
| GAAGGTGAAATCCATCACAA+AGG | + | chr2_1:66778602-66778621 | Msa0219260:CDS | 40.0% | |
| GGCAAACATTACCTTTGTGA+TGG | - | chr2_1:66778616-66778635 | None:intergenic | 40.0% | |
| TAAAGGAGCTCAACAGCTTA+GGG | - | chr2_1:66778638-66778657 | None:intergenic | 40.0% | |
| CCTCAATCTGACAATGTGAA+AGG | - | chr2_1:66778727-66778746 | None:intergenic | 40.0% | |
| CCTTTCACATTGTCAGATTG+AGG | + | chr2_1:66778724-66778743 | Msa0219260:CDS | 40.0% | |
| !!! | AGGTGATCCCTTGCTTTTTT+TGG | + | chr2_1:66779221-66779240 | Msa0219260:intron | 40.0% |
| GCGTTGAATACTTGTAGCTT+TGG | - | chr2_1:66779330-66779349 | None:intergenic | 40.0% | |
| CAAGTGACCTTTCTCATTCT+TGG | - | chr2_1:66779373-66779392 | None:intergenic | 40.0% | |
| ATCTTGAAGCTGCTGACAAA+AGG | + | chr2_1:66779448-66779467 | Msa0219260:CDS | 40.0% | |
| AACTGTTGATGTATCCGAGA+AGG | + | chr2_1:66779494-66779513 | Msa0219260:CDS | 40.0% | |
| CTCTCGAGGAGAATGTTAAT+AGG | + | chr2_1:66779676-66779695 | Msa0219260:CDS | 40.0% | |
| CAGGAAAATCTGAATCATGG+TGG | + | chr2_1:66779801-66779820 | Msa0219260:CDS | 40.0% | |
| ATTTCAAATCCTTAGGCGCT+TGG | - | chr2_1:66779845-66779864 | None:intergenic | 40.0% | |
| GAGTGCCAAAATGCATAAAG+TGG | + | chr2_1:66779902-66779921 | Msa0219260:CDS | 40.0% | |
| CCCATTCCAATTTCTGTTAC+TGG | - | chr2_1:66779942-66779961 | None:intergenic | 40.0% | |
| GTAACAGAAATTGGAATGGG+AGG | + | chr2_1:66779942-66779961 | Msa0219260:CDS | 40.0% | |
| CATTGCATTTCTCCTTGTTC+AGG | + | chr2_1:66780060-66780079 | Msa0219260:three_prime_UTR | 40.0% | |
| AAACCATTTGTGCTAAACCC+AGG | + | chr2_1:66780182-66780201 | Msa0219260:three_prime_UTR | 40.0% | |
| GTGAATTGCACATCAGATTC+TGG | + | chr2_1:66780218-66780237 | Msa0219260:three_prime_UTR | 40.0% | |
| ATGGTATACATCTGAACCAC+TGG | + | chr2_1:66780484-66780503 | Msa0219260:three_prime_UTR | 40.0% | |
| GATATTGTTGCATTTGCCAG+TGG | - | chr2_1:66780503-66780522 | None:intergenic | 40.0% | |
| TTCCTCACTGCACTCATTCA+AGG | - | chr2_1:66775919-66775938 | None:intergenic | 45.0% | |
| GCTGTCGTTCAATACTTGCT+CGG | - | chr2_1:66775961-66775980 | None:intergenic | 45.0% | |
| TTTGTGAGTGAGGTGAAGAC+TGG | - | chr2_1:66776009-66776028 | None:intergenic | 45.0% | |
| GGGTGGAAAGAAGGTTACAT+CGG | - | chr2_1:66776039-66776058 | None:intergenic | 45.0% | |
| AAGAAAAGGGGGTGGAAAGA+AGG | - | chr2_1:66776048-66776067 | None:intergenic | 45.0% | |
| TCTTGTGTTAAGGGCCTGTT+TGG | + | chr2_1:66776524-66776543 | Msa0219260:intron | 45.0% | |
| TGTTAAGGGCCTGTTTGGAT+TGG | + | chr2_1:66776529-66776548 | Msa0219260:intron | 45.0% | |
| AGCATGACCTGTGAGATGAA+AGG | - | chr2_1:66777450-66777469 | None:intergenic | 45.0% | |
| ! | GCTGAGTTATTTCCCGAAAC+GGG | + | chr2_1:66777543-66777562 | Msa0219260:intron | 45.0% |
| ! | CTGAGTTATTTCCCGAAACG+GGG | + | chr2_1:66777544-66777563 | Msa0219260:intron | 45.0% |
| GTGAACCAGGTACTAAATGC+AGG | + | chr2_1:66777732-66777751 | Msa0219260:intron | 45.0% | |
| CATTCAAAATCAGTGCACGG+AGG | - | chr2_1:66777803-66777822 | None:intergenic | 45.0% | |
| !!! | CTCCGTGCACTGATTTTGAA+TGG | + | chr2_1:66777801-66777820 | Msa0219260:CDS | 45.0% |
| ! | AGTCCTAAGATTTTCTGCGC+TGG | + | chr2_1:66778067-66778086 | Msa0219260:intron | 45.0% |
| TCCTATCCGTAAAATTGGCG+AGG | + | chr2_1:66778572-66778591 | Msa0219260:CDS | 45.0% | |
| ! | TCAGAGCCTCGCCAATTTTA+CGG | - | chr2_1:66778581-66778600 | None:intergenic | 45.0% |
| AAAGGAGCTCAACAGCTTAG+GGG | - | chr2_1:66778637-66778656 | None:intergenic | 45.0% | |
| CTAAAGGAGCTCAACAGCTT+AGG | - | chr2_1:66778639-66778658 | None:intergenic | 45.0% | |
| GACAATGTGAAAGGGAAAGC+TGG | - | chr2_1:66778718-66778737 | None:intergenic | 45.0% | |
| GTTGATGTATCCGAGAAGGA+AGG | + | chr2_1:66779498-66779517 | Msa0219260:CDS | 45.0% | |
| ATGTATCCGAGAAGGAAGGT+GGG | + | chr2_1:66779502-66779521 | Msa0219260:CDS | 45.0% | |
| !! | AGAGCCAAAGCTTTTTCCGA+GGG | - | chr2_1:66779660-66779679 | None:intergenic | 45.0% |
| TTGGCACTCTTATGCTTGAC+AGG | - | chr2_1:66779891-66779910 | None:intergenic | 45.0% | |
| GAATGGGAGGTTCATCAACA+TGG | + | chr2_1:66779955-66779974 | Msa0219260:CDS | 45.0% | |
| TGAATCGAACTCGGTACTCT+AGG | + | chr2_1:66780131-66780150 | Msa0219260:three_prime_UTR | 45.0% | |
| GAATCGAACTCGGTACTCTA+GGG | + | chr2_1:66780132-66780151 | Msa0219260:three_prime_UTR | 45.0% | |
| ! | TCACATATTAGCCTCCACCT+GGG | - | chr2_1:66780202-66780221 | None:intergenic | 45.0% |
| ! | TTCACATATTAGCCTCCACC+TGG | - | chr2_1:66780203-66780222 | None:intergenic | 45.0% |
| AGTAGTCATGCAAAAGGGGA+GGG | - | chr2_1:66780377-66780396 | None:intergenic | 45.0% | |
| TAGTAGTCATGCAAAAGGGG+AGG | - | chr2_1:66780378-66780397 | None:intergenic | 45.0% | |
| TGCCTTGAATGAGTGCAGTG+AGG | + | chr2_1:66775914-66775933 | Msa0219260:five_prime_UTR | 50.0% | |
| ! | CGGAAAGAGCTTTGTGAGTG+AGG | - | chr2_1:66776019-66776038 | None:intergenic | 50.0% |
| GCTGGCTAAGCATGATACCT+GGG | - | chr2_1:66776134-66776153 | None:intergenic | 50.0% | |
| AGCTGGCTAAGCATGATACC+TGG | - | chr2_1:66776135-66776154 | None:intergenic | 50.0% | |
| ! | TAGCACGTTTAGGACCCGTT+TGG | - | chr2_1:66776727-66776746 | None:intergenic | 50.0% |
| TTGGCCAAATTGCCACCAAG+TGG | + | chr2_1:66777252-66777271 | Msa0219260:intron | 50.0% | |
| CTGCCAGCGCAGAAAATCTT+AGG | - | chr2_1:66778073-66778092 | None:intergenic | 50.0% | |
| !! | CTAAGATTTTCTGCGCTGGC+AGG | + | chr2_1:66778071-66778090 | Msa0219260:intron | 50.0% |
| ! | GCCTCGCCAATTTTACGGAT+AGG | - | chr2_1:66778576-66778595 | None:intergenic | 50.0% |
| !! | AATTGGCGAGGCTCTGAAGA+AGG | + | chr2_1:66778584-66778603 | Msa0219260:CDS | 50.0% |
| GATGTATCCGAGAAGGAAGG+TGG | + | chr2_1:66779501-66779520 | Msa0219260:CDS | 50.0% | |
| TGTATCCGAGAAGGAAGGTG+GGG | + | chr2_1:66779503-66779522 | Msa0219260:CDS | 50.0% | |
| ATAGACCCCACCTTCCTTCT+CGG | - | chr2_1:66779511-66779530 | None:intergenic | 50.0% | |
| GGAAGGTGGGGTCTATGATA+AGG | + | chr2_1:66779515-66779534 | Msa0219260:CDS | 50.0% | |
| CAAGCCCTCGGAAAAAGCTT+TGG | + | chr2_1:66779653-66779672 | Msa0219260:CDS | 50.0% | |
| !! | GAGAGCCAAAGCTTTTTCCG+AGG | - | chr2_1:66779661-66779680 | None:intergenic | 50.0% |
| !! | GGAAAAAGCTTTGGCTCTCG+AGG | + | chr2_1:66779662-66779681 | Msa0219260:CDS | 50.0% |
| AACTGTGCTCACCCTGAACA+AGG | - | chr2_1:66780075-66780094 | None:intergenic | 50.0% | |
| CCACCTGGGTTTAGCACAAA+TGG | - | chr2_1:66780188-66780207 | None:intergenic | 50.0% | |
| CCATTTGTGCTAAACCCAGG+TGG | + | chr2_1:66780185-66780204 | Msa0219260:three_prime_UTR | 50.0% | |
| TTTGTGCTAAACCCAGGTGG+AGG | + | chr2_1:66780188-66780207 | Msa0219260:three_prime_UTR | 50.0% | |
| GTAGTCATGCAAAAGGGGAG+GGG | - | chr2_1:66780376-66780395 | None:intergenic | 50.0% | |
| GGGAAAGCTGGAACCAGAAG+AGG | - | chr2_1:66778706-66778725 | None:intergenic | 55.0% | |
| GCTACAGAACCAAGCGCCTA+AGG | + | chr2_1:66779833-66779852 | Msa0219260:CDS | 55.0% | |
| AAAGGACGACGGCAAGCCCT+CGG | + | chr2_1:66779641-66779660 | Msa0219260:CDS | 60.0% | |
| CATGCAAAAGGGGAGGGGAG+AGG | - | chr2_1:66780371-66780390 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 66775895 | 66780554 | 66775895 | ID=Msa0219260;Name=Msa0219260 |
| chr2_1 | mRNA | 66775895 | 66780554 | 66775895 | ID=Msa0219260-mRNA-1;Parent=Msa0219260;Name=Msa0219260-mRNA-1;_AED=0.05;_eAED=0.05;_QI=47|1|1|1|1|1|10|568|468 |
| chr2_1 | exon | 66775895 | 66776040 | 66775895 | ID=Msa0219260-mRNA-1:exon:18831;Parent=Msa0219260-mRNA-1 |
| chr2_1 | exon | 66776136 | 66776207 | 66776136 | ID=Msa0219260-mRNA-1:exon:18832;Parent=Msa0219260-mRNA-1 |
| chr2_1 | exon | 66776307 | 66776399 | 66776307 | ID=Msa0219260-mRNA-1:exon:18833;Parent=Msa0219260-mRNA-1 |
| chr2_1 | exon | 66777741 | 66777822 | 66777741 | ID=Msa0219260-mRNA-1:exon:18834;Parent=Msa0219260-mRNA-1 |
| chr2_1 | exon | 66777977 | 66778033 | 66777977 | ID=Msa0219260-mRNA-1:exon:18835;Parent=Msa0219260-mRNA-1 |
| chr2_1 | exon | 66778559 | 66778623 | 66778559 | ID=Msa0219260-mRNA-1:exon:18836;Parent=Msa0219260-mRNA-1 |
| chr2_1 | exon | 66778719 | 66778814 | 66778719 | ID=Msa0219260-mRNA-1:exon:18837;Parent=Msa0219260-mRNA-1 |
| chr2_1 | exon | 66778969 | 66779055 | 66778969 | ID=Msa0219260-mRNA-1:exon:18838;Parent=Msa0219260-mRNA-1 |
| chr2_1 | exon | 66779142 | 66779222 | 66779142 | ID=Msa0219260-mRNA-1:exon:18839;Parent=Msa0219260-mRNA-1 |
| chr2_1 | exon | 66779312 | 66780554 | 66779312 | ID=Msa0219260-mRNA-1:exon:18840;Parent=Msa0219260-mRNA-1 |
| chr2_1 | five_prime_UTR | 66775895 | 66775941 | 66775895 | ID=Msa0219260-mRNA-1:five_prime_utr;Parent=Msa0219260-mRNA-1 |
| chr2_1 | CDS | 66775942 | 66776040 | 66775942 | ID=Msa0219260-mRNA-1:cds;Parent=Msa0219260-mRNA-1 |
| chr2_1 | CDS | 66776136 | 66776207 | 66776136 | ID=Msa0219260-mRNA-1:cds;Parent=Msa0219260-mRNA-1 |
| chr2_1 | CDS | 66776307 | 66776399 | 66776307 | ID=Msa0219260-mRNA-1:cds;Parent=Msa0219260-mRNA-1 |
| chr2_1 | CDS | 66777741 | 66777822 | 66777741 | ID=Msa0219260-mRNA-1:cds;Parent=Msa0219260-mRNA-1 |
| chr2_1 | CDS | 66777977 | 66778033 | 66777977 | ID=Msa0219260-mRNA-1:cds;Parent=Msa0219260-mRNA-1 |
| chr2_1 | CDS | 66778559 | 66778623 | 66778559 | ID=Msa0219260-mRNA-1:cds;Parent=Msa0219260-mRNA-1 |
| chr2_1 | CDS | 66778719 | 66778814 | 66778719 | ID=Msa0219260-mRNA-1:cds;Parent=Msa0219260-mRNA-1 |
| chr2_1 | CDS | 66778969 | 66779055 | 66778969 | ID=Msa0219260-mRNA-1:cds;Parent=Msa0219260-mRNA-1 |
| chr2_1 | CDS | 66779142 | 66779222 | 66779142 | ID=Msa0219260-mRNA-1:cds;Parent=Msa0219260-mRNA-1 |
| chr2_1 | CDS | 66779312 | 66779986 | 66779312 | ID=Msa0219260-mRNA-1:cds;Parent=Msa0219260-mRNA-1 |
| chr2_1 | three_prime_UTR | 66779987 | 66780554 | 66779987 | ID=Msa0219260-mRNA-1:three_prime_utr;Parent=Msa0219260-mRNA-1 |
| Gene Sequence |
| Protein sequence |
