Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0298320 | XP_003596864.1 | 94.444 | 468 | 26 | 0 | 1 | 468 | 1 | 468 | 0.0 | 809 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0298320 | sp|Q5HZV9|PP1R7_RAT | 31.950 | 241 | 161 | 3 | 20 | 260 | 121 | 358 | 5.68e-25 | 108 |
| Msa0298320 | sp|Q5HZV9|PP1R7_RAT | 31.098 | 164 | 103 | 2 | 1 | 154 | 190 | 353 | 1.09e-12 | 72.8 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0298320 | G7IHH7 | 94.444 | 468 | 26 | 0 | 1 | 468 | 1 | 468 | 0.0 | 809 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0189320 | Msa0298320 | 0.823347 | 1.454375e-53 | -8.615850e-47 |
| Msa0219260 | Msa0298320 | 0.819721 | 1.000740e-52 | -8.615850e-47 |
| Msa0258890 | Msa0298320 | 0.812175 | 4.839568e-51 | -8.615850e-47 |
| Msa0271510 | Msa0298320 | 0.820866 | 5.468836e-53 | -8.615850e-47 |
| Msa0298320 | Msa0463010 | 0.805365 | 1.382894e-49 | -8.615850e-47 |
| Msa0298320 | Msa0606720 | 0.821190 | 4.606380e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0298320 | MtrunA17_Chr2g0321711 | 94.444 | 468 | 26 | 0 | 1 | 468 | 1 | 468 | 0.0 | 809 |
| Msa0298320 | MtrunA17_Chr8g0390081 | 28.692 | 237 | 135 | 6 | 19 | 252 | 94 | 299 | 1.59e-12 | 68.6 |
| Msa0298320 | MtrunA17_Chr5g0426251 | 33.333 | 168 | 106 | 4 | 97 | 260 | 418 | 583 | 4.66e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0298320 | AT5G22320.1 | 46.316 | 475 | 222 | 11 | 1 | 466 | 1 | 451 | 1.14e-113 | 342 |
| Msa0298320 | AT5G22320.2 | 44.421 | 475 | 215 | 12 | 1 | 466 | 1 | 435 | 5.81e-103 | 314 |
| Msa0298320 | AT5G19680.1 | 30.943 | 265 | 136 | 9 | 1 | 252 | 62 | 292 | 6.33e-14 | 73.2 |
| Msa0298320 | AT5G19680.1 | 32.857 | 140 | 83 | 2 | 37 | 171 | 193 | 326 | 1.25e-11 | 66.2 |
Find 122 sgRNAs with CRISPR-Local
Find 261 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTAGCCAGCTTCAATAAAT+TGG | 0.169541 | 2_3:+52210493 | Msa0298320:CDS |
| GAATTGTGCATTATTTCTTC+TGG | 0.177535 | 2_3:-52213322 | None:intergenic |
| AGAAATTCATTTGAAGTAAT+TGG | 0.187992 | 2_3:-52214667 | None:intergenic |
| CCCATTCCAATTTCTGTTAC+TGG | 0.188491 | 2_3:-52214286 | None:intergenic |
| CATTGCATTTCTCCTTGTTC+AGG | 0.189521 | 2_3:+52214407 | Msa0298320:three_prime_UTR |
| AGACTCCACTTTATGCATTT+TGG | 0.207816 | 2_3:-52214254 | None:intergenic |
| TGCAAAATGGTCAGATATAA+AGG | 0.253542 | 2_3:+52213381 | Msa0298320:CDS |
| TTCTTGGTATCTTTATCTAT+TGG | 0.257179 | 2_3:-52213701 | None:intergenic |
| TCATCTCCAGTAACAGAAAT+TGG | 0.264149 | 2_3:+52214280 | Msa0298320:CDS |
| TCTTGCTCACAATGATATTA+AGG | 0.282764 | 2_3:+52213140 | Msa0298320:CDS |
| AAAGCTTCGGAATTTAGATT+TGG | 0.286348 | 2_3:+52213345 | Msa0298320:CDS |
| CAAGTGACCTTTCTCATTCT+TGG | 0.296468 | 2_3:-52213717 | None:intergenic |
| AAGAAAATTTAAACTCCCTT+TGG | 0.331012 | 2_3:-52214775 | None:intergenic |
| AAGCTTCGGAATTTAGATTT+GGG | 0.337577 | 2_3:+52213346 | Msa0298320:CDS |
| ACAAAATACTCAATAAATAA+TGG | 0.340042 | 2_3:-52214642 | None:intergenic |
| CAGATGTATACCATTACATT+TGG | 0.349903 | 2_3:-52214822 | None:intergenic |
| ACAGGTCATAACAAGGATAA+TGG | 0.368572 | 2_3:+52213890 | Msa0298320:CDS |
| ACTTTCTCATTTGTAGCAAC+AGG | 0.381222 | 2_3:-52213537 | None:intergenic |
| GGTATCTTTATCTATTGGTT+TGG | 0.382169 | 2_3:-52213696 | None:intergenic |
| TAAATTGAGATTTCTCAGTT+TGG | 0.382838 | 2_3:-52213505 | None:intergenic |
| TTCCTCACTGCACTCATTCA+AGG | 0.388703 | 2_3:-52210265 | None:intergenic |
| GGAGAATAAATTAGAAAGCT+TGG | 0.390492 | 2_3:+52210697 | Msa0298320:CDS |
| ATAGACCCCACCTTCCTTCT+CGG | 0.391386 | 2_3:-52213855 | None:intergenic |
| AATTGTGCATTATTTCTTCT+GGG | 0.394886 | 2_3:-52213321 | None:intergenic |
| AGAGGAGACATAAAACTTAA+TGG | 0.396284 | 2_3:-52214697 | None:intergenic |
| ATTGCATTTCTCCTTGTTCA+GGG | 0.397484 | 2_3:+52214408 | Msa0298320:three_prime_UTR |
| GTTGATTTATTCTTCGTGTC+AGG | 0.403540 | 2_3:-52213950 | None:intergenic |
| CATCTGATCAAGTTTGCAAA+TGG | 0.405995 | 2_3:-52212339 | None:intergenic |
| CCTTTCACATTGTCAGATTG+AGG | 0.407813 | 2_3:+52213071 | Msa0298320:CDS |
| CCACCTGGGTTTAGCACAAA+TGG | 0.413148 | 2_3:-52214532 | None:intergenic |
| TCAGAGCCTCGCCAATCTTA+CGG | 0.436737 | 2_3:-52212925 | None:intergenic |
| GCGTTGAATACTTGTAGCTT+TGG | 0.437925 | 2_3:-52213674 | None:intergenic |
| ATCTTGAAGCTGCTGACAAA+AGG | 0.439283 | 2_3:+52213795 | Msa0298320:CDS |
| CTCTCGAGGAGAATGTTAAT+AGG | 0.448873 | 2_3:+52214023 | Msa0298320:CDS |
| CTTTCACATTGTCAGATTGA+GGG | 0.449337 | 2_3:+52213072 | Msa0298320:CDS |
| GAAAGCTTGGAAGGAATTCA+AGG | 0.449690 | 2_3:+52210710 | Msa0298320:CDS |
| TTGGCACTCTTATGCTTGAC+AGG | 0.455417 | 2_3:-52214235 | None:intergenic |
| TACTCAATAAATAATGGAAA+AGG | 0.460616 | 2_3:-52214636 | None:intergenic |
| TGAATCGAACTCGGTACTCT+AGG | 0.462484 | 2_3:+52214478 | Msa0298320:three_prime_UTR |
| ATTTCAAATCCTTAGGCGCT+TGG | 0.462547 | 2_3:-52214189 | None:intergenic |
| TAATCTTCATCCAAATGTAA+TGG | 0.462717 | 2_3:+52214812 | Msa0298320:three_prime_UTR |
| TAATGCACAATTCAAAGCTT+CGG | 0.462950 | 2_3:+52213332 | Msa0298320:CDS |
| TTTCATAGTAGTCATGCAAA+AGG | 0.463184 | 2_3:-52214727 | None:intergenic |
| GGAAGGTGGGGTCTATGATA+AGG | 0.467284 | 2_3:+52213862 | Msa0298320:CDS |
| AATAATGGAAAAGGCAAGAA+AGG | 0.468786 | 2_3:-52214627 | None:intergenic |
| TTTGAAGTGGTTATCAGTTG+TGG | 0.468829 | 2_3:+52210676 | Msa0298320:CDS |
| TGAAGACTGGAAATTGAACT+TGG | 0.471828 | 2_3:-52210342 | None:intergenic |
| GTATGGTGTAAAAGGGATTG+AGG | 0.475885 | 2_3:+52210642 | Msa0298320:intron |
| TGGCAAATGCAACAATATCT+TGG | 0.480404 | 2_3:+52214851 | Msa0298320:three_prime_UTR |
| TTCACATATTAGCCTCCACC+TGG | 0.481607 | 2_3:-52214547 | None:intergenic |
| CTCAATCTGACAATGTGAAA+GGG | 0.482918 | 2_3:-52213070 | None:intergenic |
| CTCACTAATTTCAAATCCTT+AGG | 0.490267 | 2_3:-52214196 | None:intergenic |
| TATGGTGTAAAAGGGATTGA+GGG | 0.493320 | 2_3:+52210643 | Msa0298320:intron |
| CATGCAAAAGGGGAGGGGAG+AGG | 0.494113 | 2_3:-52214715 | None:intergenic |
| TTCATAGTAGTCATGCAAAA+GGG | 0.494527 | 2_3:-52214726 | None:intergenic |
| AATGTCAGCAAATGAAGCTT+CGG | 0.495172 | 2_3:-52214110 | None:intergenic |
| GGAATAATGTGATTGCAAAA+TGG | 0.498927 | 2_3:+52213368 | Msa0298320:CDS |
| ACTGGAAATTGAACTTGGAT+TGG | 0.499943 | 2_3:-52210337 | None:intergenic |
| AATTGTTGTTACTTTCCAAA+GGG | 0.502368 | 2_3:+52214760 | Msa0298320:three_prime_UTR |
| GAGTGCCAAAATGCATAAAG+TGG | 0.507006 | 2_3:+52214249 | Msa0298320:CDS |
| GTCTATGATAAGGAAAATAC+AGG | 0.507147 | 2_3:+52213872 | Msa0298320:CDS |
| AAAGGACGACGGCAAGCCCT+CGG | 0.507847 | 2_3:+52213988 | Msa0298320:CDS |
| GGCAAACATTACCTTTGTGA+TGG | 0.510475 | 2_3:-52212960 | None:intergenic |
| AAAGATACCAAGAATGAGAA+AGG | 0.511481 | 2_3:+52213710 | Msa0298320:CDS |
| CCAGTAACAGAAATTGGAAT+GGG | 0.514929 | 2_3:+52214286 | Msa0298320:CDS |
| GCTACAGAACCAAGCGCCTA+AGG | 0.515364 | 2_3:+52214180 | Msa0298320:CDS |
| GATCAGGAAAATCTGAATCA+TGG | 0.515970 | 2_3:+52214145 | Msa0298320:CDS |
| GGAAATTGAACTTGGATTGG+CGG | 0.520167 | 2_3:-52210334 | None:intergenic |
| ATGGTATACATCTGAACCAC+TGG | 0.522003 | 2_3:+52214831 | Msa0298320:three_prime_UTR |
| CAGTTCAACACAAAACTTGA+GGG | 0.525455 | 2_3:-52213106 | None:intergenic |
| AATAAATTAGAAAGCTTGGA+AGG | 0.526330 | 2_3:+52210701 | Msa0298320:CDS |
| CTGAGAAATCTCAATTTACA+AGG | 0.527846 | 2_3:+52213510 | Msa0298320:CDS |
| GCTGTCGTTCAATACTTGCT+CGG | 0.536067 | 2_3:-52210307 | None:intergenic |
| GAATGGGAGGTTCATCAACA+TGG | 0.536187 | 2_3:+52214302 | Msa0298320:CDS |
| CAATAATCTCACTTCACTTG+AGG | 0.539721 | 2_3:+52210535 | Msa0298320:CDS |
| CCTCAATCTGACAATGTGAA+AGG | 0.540601 | 2_3:-52213071 | None:intergenic |
| ATGAAAGAATTGAATACTCT+CGG | 0.542671 | 2_3:+52212359 | Msa0298320:CDS |
| CGGAAAGAGCTTTGTGAGTG+AGG | 0.545351 | 2_3:-52210365 | None:intergenic |
| GTGAACCAGGTACTAAATGC+AGG | 0.545787 | 2_3:+52212079 | Msa0298320:intron |
| GATTGGCGAGGCTCTGAAGA+AGG | 0.550173 | 2_3:+52212931 | Msa0298320:CDS |
| TCCAGTAACAGAAATTGGAA+TGG | 0.551066 | 2_3:+52214285 | Msa0298320:CDS |
| AAATGAGAAAGTTACAAGAA+AGG | 0.556080 | 2_3:+52213548 | Msa0298320:CDS |
| GTACCGAGTTCGATTCATAC+TGG | 0.557570 | 2_3:-52214472 | None:intergenic |
| GAATCGAACTCGGTACTCTA+GGG | 0.559753 | 2_3:+52214479 | Msa0298320:three_prime_UTR |
| AAGAGACAAACATCACAAGC+AGG | 0.566680 | 2_3:-52214589 | None:intergenic |
| GTAGTCATGCAAAAGGGGAG+GGG | 0.566771 | 2_3:-52214720 | None:intergenic |
| TGAGTCAGTAAGAAAACAGT+AGG | 0.568093 | 2_3:-52214370 | None:intergenic |
| AGTAGTCATGCAAAAGGGGA+GGG | 0.568334 | 2_3:-52214721 | None:intergenic |
| AGCTTCGGAATTTAGATTTG+GGG | 0.572795 | 2_3:+52213347 | Msa0298320:CDS |
| TTTGTGAGTGAGGTGAAGAC+TGG | 0.573523 | 2_3:-52210355 | None:intergenic |
| AAATTGTTGTTACTTTCCAA+AGG | 0.579314 | 2_3:+52214759 | Msa0298320:three_prime_UTR |
| AACTGTTGATGTATCCGAGA+AGG | 0.580615 | 2_3:+52213841 | Msa0298320:CDS |
| GATGTATCCGAGAAGGAAGG+TGG | 0.583676 | 2_3:+52213848 | Msa0298320:CDS |
| AACTGTGCTCACCCTGAACA+AGG | 0.591893 | 2_3:-52214419 | None:intergenic |
| GATATTGTTGCATTTGCCAG+TGG | 0.603591 | 2_3:-52214847 | None:intergenic |
| AGATCATGTCGATCAAAATG+AGG | 0.604619 | 2_3:+52213766 | Msa0298320:CDS |
| CACCATTCAAAATCAGTGCA+CGG | 0.606464 | 2_3:-52212150 | None:intergenic |
| GCCTCGCCAATCTTACGGAT+AGG | 0.606743 | 2_3:-52212920 | None:intergenic |
| TTTGTGCTAAACCCAGGTGG+AGG | 0.613343 | 2_3:+52214535 | Msa0298320:three_prime_UTR |
| TCATAGTAGTCATGCAAAAG+GGG | 0.614238 | 2_3:-52214725 | None:intergenic |
| GGGCATGTGTTAATTTGAAG+TGG | 0.617171 | 2_3:+52210663 | Msa0298320:CDS |
| AAAGAAGAATCGAAAGAACA+AGG | 0.618334 | 2_3:+52214057 | Msa0298320:CDS |
| ATGTATCCGAGAAGGAAGGT+GGG | 0.618544 | 2_3:+52213849 | Msa0298320:CDS |
| TAGTAGTCATGCAAAAGGGG+AGG | 0.622420 | 2_3:-52214722 | None:intergenic |
| AATGGGAGGTTCATCAACAT+GGG | 0.631794 | 2_3:+52214303 | Msa0298320:CDS |
| GGAAAATACAGGTCATAACA+AGG | 0.632189 | 2_3:+52213883 | Msa0298320:CDS |
| TCAGTTCAACACAAAACTTG+AGG | 0.639929 | 2_3:-52213107 | None:intergenic |
| TGACCAGTATGAATCGAACT+CGG | 0.640275 | 2_3:+52214469 | Msa0298320:three_prime_UTR |
| GTTGATGTATCCGAGAAGGA+AGG | 0.641292 | 2_3:+52213845 | Msa0298320:CDS |
| GTAACAGAAATTGGAATGGG+AGG | 0.647412 | 2_3:+52214289 | Msa0298320:CDS |
| AGAGACAAACATCACAAGCA+GGG | 0.656053 | 2_3:-52214588 | None:intergenic |
| TCCTATCCGTAAGATTGGCG+AGG | 0.659591 | 2_3:+52212919 | Msa0298320:CDS |
| TCACATATTAGCCTCCACCT+GGG | 0.660002 | 2_3:-52214546 | None:intergenic |
| TGTATCCGAGAAGGAAGGTG+GGG | 0.665884 | 2_3:+52213850 | Msa0298320:CDS |
| ATTCAAAATCAGTGCACGGA+GGG | 0.667546 | 2_3:-52212146 | None:intergenic |
| AAACCATTTGTGCTAAACCC+AGG | 0.672861 | 2_3:+52214529 | Msa0298320:three_prime_UTR |
| GAAGGTGAAATCCATCACAA+AGG | 0.679265 | 2_3:+52212949 | Msa0298320:CDS |
| ATGGGAGGTTCATCAACATG+GGG | 0.706743 | 2_3:+52214304 | Msa0298320:CDS |
| CCATTTGTGCTAAACCCAGG+TGG | 0.709050 | 2_3:+52214532 | Msa0298320:three_prime_UTR |
| CAGGAAAATCTGAATCATGG+TGG | 0.716042 | 2_3:+52214148 | Msa0298320:CDS |
| CATTCAAAATCAGTGCACGG+AGG | 0.728165 | 2_3:-52212147 | None:intergenic |
| TGCCTTGAATGAGTGCAGTG+AGG | 0.768971 | 2_3:+52210263 | Msa0298320:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAAGTTAAGATTTTTTA+GGG | - | chr2_3:52210444-52210463 | None:intergenic | 10.0% |
| !!! | AAAAAAAGTTAAGATTTTTT+AGG | - | chr2_3:52210445-52210464 | None:intergenic | 10.0% |
| !! | AAAAAATAAACTTAAATCTA+TGG | + | chr2_3:52212102-52212121 | Msa0298320:CDS | 10.0% |
| !! | TTGAAAGTTATGAAAAAAAT+TGG | + | chr2_3:52210586-52210605 | Msa0298320:intron | 15.0% |
| !!! | TATTTCTATTTCTATTTCTA+TGG | + | chr2_3:52211094-52211113 | Msa0298320:intron | 15.0% |
| !!! | ATTTCTATTTCTATTTCTAT+GGG | + | chr2_3:52211095-52211114 | Msa0298320:intron | 15.0% |
| !! | ACAATAAAAATAGAGTTTAA+TGG | - | chr2_3:52211291-52211310 | None:intergenic | 15.0% |
| !!! | AAACTCTATTTTTATTGTTA+TGG | + | chr2_3:52211293-52211312 | Msa0298320:intron | 15.0% |
| !! | ACAAAATACTCAATAAATAA+TGG | - | chr2_3:52214645-52214664 | None:intergenic | 15.0% |
| !!! | AAATATCTTTTGATTATACA+TGG | - | chr2_3:52214880-52214899 | None:intergenic | 15.0% |
| !!! | TTTTTAGGGTTTTAACAAAA+GGG | - | chr2_3:52210430-52210449 | None:intergenic | 20.0% |
| !!! | TTTTTTAGGGTTTTAACAAA+AGG | - | chr2_3:52210431-52210450 | None:intergenic | 20.0% |
| !! | TATGAAAAAAATTGGAACTT+TGG | + | chr2_3:52210594-52210613 | Msa0298320:intron | 20.0% |
| !!! | TTGATTGTATTTTGTATGTA+TGG | + | chr2_3:52210625-52210644 | Msa0298320:intron | 20.0% |
| !!! | GTTTAAAAATTATTTTACGC+TGG | - | chr2_3:52211139-52211158 | None:intergenic | 20.0% |
| !! | TTGAGATTAAAGTTCATTAA+AGG | - | chr2_3:52211560-52211579 | None:intergenic | 20.0% |
| !! | TAATGAACTTTAATCTCAAA+TGG | + | chr2_3:52211561-52211580 | Msa0298320:intron | 20.0% |
| !! | ATGTTTAATAAAGCGTATTA+TGG | + | chr2_3:52211819-52211838 | Msa0298320:intron | 20.0% |
| !! | AGTATATTATTCTGAACATA+TGG | - | chr2_3:52211963-52211982 | None:intergenic | 20.0% |
| !! | TTGTAACAAAGTATAAACAT+AGG | - | chr2_3:52212011-52212030 | None:intergenic | 20.0% |
| !!! | TTTGAAATGCAAACTATTTT+TGG | + | chr2_3:52212820-52212839 | Msa0298320:intron | 20.0% |
| !! | TATTCAAAAATTATTTGAGC+TGG | - | chr2_3:52212870-52212889 | None:intergenic | 20.0% |
| !!! | TACTCAATAAATAATGGAAA+AGG | - | chr2_3:52214639-52214658 | None:intergenic | 20.0% |
| !!! | AGAAATTCATTTGAAGTAAT+TGG | - | chr2_3:52214670-52214689 | None:intergenic | 20.0% |
| !!! | TTTTAGGGTTTTAACAAAAG+GGG | - | chr2_3:52210429-52210448 | None:intergenic | 25.0% |
| !! | TTTTGTATGTATGGTGTAAA+AGG | + | chr2_3:52210634-52210653 | Msa0298320:intron | 25.0% |
| ! | TTTGTATGTATGGTGTAAAA+GGG | + | chr2_3:52210635-52210654 | Msa0298320:intron | 25.0% |
| ! | AATAAATTAGAAAGCTTGGA+AGG | + | chr2_3:52210701-52210720 | Msa0298320:CDS | 25.0% |
| ! | TTTATATTAACAAAGCAGCT+AGG | - | chr2_3:52210759-52210778 | None:intergenic | 25.0% |
| ! | CAACACATACATATAGAATA+AGG | - | chr2_3:52210819-52210838 | None:intergenic | 25.0% |
| ! | AAAAATAAGTCAATCCAAAC+AGG | - | chr2_3:52210888-52210907 | None:intergenic | 25.0% |
| ! | TATTATTCATAAGCTTGTCA+AGG | - | chr2_3:52211015-52211034 | None:intergenic | 25.0% |
| ! | AATAGAAATATAGCACGTTT+AGG | - | chr2_3:52211084-52211103 | None:intergenic | 25.0% |
| !!! | TTCTATTTCTATGGGAAAAT+AGG | + | chr2_3:52211103-52211122 | Msa0298320:intron | 25.0% |
| !! | AAATTATTTGGTGGAATACA+CGG | - | chr2_3:52211178-52211197 | None:intergenic | 25.0% |
| ! | GAGAAATAGTTAATTCCAAT+TGG | + | chr2_3:52211227-52211246 | Msa0298320:intron | 25.0% |
| !! | TATGATTGATTGTGATTTGT+TGG | + | chr2_3:52211434-52211453 | Msa0298320:intron | 25.0% |
| ! | ATGGCTTATAGAAATTATCT+TGG | + | chr2_3:52211580-52211599 | Msa0298320:intron | 25.0% |
| ! | TAATAAAGCGTATTATGGTT+AGG | + | chr2_3:52211824-52211843 | Msa0298320:intron | 25.0% |
| ! | AATAAAGCGTATTATGGTTA+GGG | + | chr2_3:52211825-52211844 | Msa0298320:intron | 25.0% |
| ! | TTCAACTTTCAAAATAGATG+AGG | - | chr2_3:52212202-52212221 | None:intergenic | 25.0% |
| ! | ATGAAAGAATTGAATACTCT+CGG | + | chr2_3:52212359-52212378 | Msa0298320:CDS | 25.0% |
| ! | ATTCAAACTGTCTTGATATA+AGG | + | chr2_3:52212687-52212706 | Msa0298320:intron | 25.0% |
| ! | AAATAACTAATGAGCACTAA+AGG | - | chr2_3:52213002-52213021 | None:intergenic | 25.0% |
| !! | ATTACTCATAATTCCTCTTT+TGG | + | chr2_3:52213037-52213056 | Msa0298320:intron | 25.0% |
| !!! | TTTTTGATTCTACATGCTTT+TGG | + | chr2_3:52213187-52213206 | Msa0298320:intron | 25.0% |
| !! | AATTGTGCATTATTTCTTCT+GGG | - | chr2_3:52213324-52213343 | None:intergenic | 25.0% |
| ! | TAAATTGAGATTTCTCAGTT+TGG | - | chr2_3:52213508-52213527 | None:intergenic | 25.0% |
| ! | AAATGAGAAAGTTACAAGAA+AGG | + | chr2_3:52213548-52213567 | Msa0298320:CDS | 25.0% |
| !! | TTTTGAACCAAAAAAAGCAA+GGG | - | chr2_3:52213578-52213597 | None:intergenic | 25.0% |
| !! | ATTTTGAACCAAAAAAAGCA+AGG | - | chr2_3:52213579-52213598 | None:intergenic | 25.0% |
| ! | TTCTTGGTATCTTTATCTAT+TGG | - | chr2_3:52213704-52213723 | None:intergenic | 25.0% |
| !!! | AGTTTCCTTTCTTTTTTTAC+TGG | - | chr2_3:52213825-52213844 | None:intergenic | 25.0% |
| ! | AACGAAGAAAAAGCTAAAAA+AGG | + | chr2_3:52213970-52213989 | Msa0298320:CDS | 25.0% |
| !!! | AAATTGTTGTTACTTTCCAA+AGG | + | chr2_3:52214759-52214778 | Msa0298320:three_prime_UTR | 25.0% |
| !!! | AATTGTTGTTACTTTCCAAA+GGG | + | chr2_3:52214760-52214779 | Msa0298320:three_prime_UTR | 25.0% |
| ! | AAGAAAATTTAAACTCCCTT+TGG | - | chr2_3:52214778-52214797 | None:intergenic | 25.0% |
| ! | TAATCTTCATCCAAATGTAA+TGG | + | chr2_3:52214812-52214831 | Msa0298320:three_prime_UTR | 25.0% |
| TTAATCTTTGTTCATTTCCC+AGG | + | chr2_3:52210463-52210482 | Msa0298320:intron | 30.0% | |
| ! | CTTTTCCAATTTATTGAAGC+TGG | - | chr2_3:52210501-52210520 | None:intergenic | 30.0% |
| GGAGAATAAATTAGAAAGCT+TGG | + | chr2_3:52210697-52210716 | Msa0298320:CDS | 30.0% | |
| !! | ATATGTATGTGTTGCTTAGA+AGG | + | chr2_3:52210825-52210844 | Msa0298320:intron | 30.0% |
| ! | TGATAGCTTTTCTTGTGTTA+AGG | + | chr2_3:52210861-52210880 | Msa0298320:intron | 30.0% |
| ! | GATAGCTTTTCTTGTGTTAA+GGG | + | chr2_3:52210862-52210881 | Msa0298320:intron | 30.0% |
| AAAACATAACGCAATCCAAA+CGG | + | chr2_3:52211056-52211075 | Msa0298320:intron | 30.0% | |
| GGATATAGCAAATTATTTGG+TGG | - | chr2_3:52211187-52211206 | None:intergenic | 30.0% | |
| GTGGGATATAGCAAATTATT+TGG | - | chr2_3:52211190-52211209 | None:intergenic | 30.0% | |
| AAACCAAAGTTGTATGAAGA+AGG | + | chr2_3:52211491-52211510 | Msa0298320:intron | 30.0% | |
| ! | CAAGTGGAATTGTTTAGTTT+CGG | + | chr2_3:52211615-52211634 | Msa0298320:intron | 30.0% |
| AGTACACAAAAATACTTCAC+TGG | - | chr2_3:52211662-52211681 | None:intergenic | 30.0% | |
| !! | GTGAAGTATTTTTGTGTACT+TGG | + | chr2_3:52211662-52211681 | Msa0298320:intron | 30.0% |
| AAACTATAAACTTGAGCACA+TGG | - | chr2_3:52211746-52211765 | None:intergenic | 30.0% | |
| TTATTCTGAACATATGGATG+TGG | - | chr2_3:52211957-52211976 | None:intergenic | 30.0% | |
| ! | AAACAAGAGATTTTGTAAGC+TGG | + | chr2_3:52212598-52212617 | Msa0298320:intron | 30.0% |
| TTGCATTTCAAACATACAAC+AGG | - | chr2_3:52212812-52212831 | None:intergenic | 30.0% | |
| ACCATCAGCAAGATATTATT+TGG | - | chr2_3:52212846-52212865 | None:intergenic | 30.0% | |
| AAAAATCCTATCCGTAAGAT+TGG | + | chr2_3:52212914-52212933 | Msa0298320:CDS | 30.0% | |
| TCTTGCTCACAATGATATTA+AGG | + | chr2_3:52213140-52213159 | Msa0298320:CDS | 30.0% | |
| !!! | TGCTTTTGGAATGTTTAATG+TGG | + | chr2_3:52213201-52213220 | Msa0298320:intron | 30.0% |
| ! | TACACTATTGTGCTAACTTT+TGG | + | chr2_3:52213286-52213305 | Msa0298320:intron | 30.0% |
| ! | GAATTGTGCATTATTTCTTC+TGG | - | chr2_3:52213325-52213344 | None:intergenic | 30.0% |
| TAATGCACAATTCAAAGCTT+CGG | + | chr2_3:52213332-52213351 | Msa0298320:CDS | 30.0% | |
| AAAGCTTCGGAATTTAGATT+TGG | + | chr2_3:52213345-52213364 | Msa0298320:CDS | 30.0% | |
| AAGCTTCGGAATTTAGATTT+GGG | + | chr2_3:52213346-52213365 | Msa0298320:CDS | 30.0% | |
| GGAATAATGTGATTGCAAAA+TGG | + | chr2_3:52213368-52213387 | Msa0298320:CDS | 30.0% | |
| TGCAAAATGGTCAGATATAA+AGG | + | chr2_3:52213381-52213400 | Msa0298320:CDS | 30.0% | |
| AGATATAAAGGTTTGTCATC+TGG | + | chr2_3:52213393-52213412 | Msa0298320:intron | 30.0% | |
| CTGAGAAATCTCAATTTACA+AGG | + | chr2_3:52213510-52213529 | Msa0298320:CDS | 30.0% | |
| ATCATACACATGGTAGTTTA+AGG | - | chr2_3:52213632-52213651 | None:intergenic | 30.0% | |
| AATCTGTAACATCATACACA+TGG | - | chr2_3:52213642-52213661 | None:intergenic | 30.0% | |
| ! | GGTATCTTTATCTATTGGTT+TGG | - | chr2_3:52213699-52213718 | None:intergenic | 30.0% |
| AAAGATACCAAGAATGAGAA+AGG | + | chr2_3:52213710-52213729 | Msa0298320:CDS | 30.0% | |
| TGAAAAATCATGAGCATCAT+CGG | - | chr2_3:52213744-52213763 | None:intergenic | 30.0% | |
| GAAGTCCAGTAAAAAAAGAA+AGG | + | chr2_3:52213817-52213836 | Msa0298320:CDS | 30.0% | |
| GTCTATGATAAGGAAAATAC+AGG | + | chr2_3:52213872-52213891 | Msa0298320:CDS | 30.0% | |
| AAAAAGAAAGACAAACTCAC+AGG | + | chr2_3:52213917-52213936 | Msa0298320:CDS | 30.0% | |
| AAAAAGCTAAAAAAGGACGA+CGG | + | chr2_3:52213977-52213996 | Msa0298320:CDS | 30.0% | |
| AAAGAAGAATCGAAAGAACA+AGG | + | chr2_3:52214057-52214076 | Msa0298320:CDS | 30.0% | |
| ! | TGCTGACATTTTTAACATCA+AGG | + | chr2_3:52214123-52214142 | Msa0298320:CDS | 30.0% |
| ! | CATTTTTAACATCAAGGATC+AGG | + | chr2_3:52214129-52214148 | Msa0298320:CDS | 30.0% |
| CTCACTAATTTCAAATCCTT+AGG | - | chr2_3:52214199-52214218 | None:intergenic | 30.0% | |
| ! | AATAATGGAAAAGGCAAGAA+AGG | - | chr2_3:52214630-52214649 | None:intergenic | 30.0% |
| AGAGGAGACATAAAACTTAA+TGG | - | chr2_3:52214700-52214719 | None:intergenic | 30.0% | |
| TTCATAGTAGTCATGCAAAA+GGG | - | chr2_3:52214729-52214748 | None:intergenic | 30.0% | |
| TTTCATAGTAGTCATGCAAA+AGG | - | chr2_3:52214730-52214749 | None:intergenic | 30.0% | |
| CAGATGTATACCATTACATT+TGG | - | chr2_3:52214825-52214844 | None:intergenic | 30.0% | |
| ACTGGAAATTGAACTTGGAT+TGG | - | chr2_3:52210340-52210359 | None:intergenic | 35.0% | |
| TGAAGACTGGAAATTGAACT+TGG | - | chr2_3:52210345-52210364 | None:intergenic | 35.0% | |
| GGTTTAGAGAAAAGAAAAGG+GGG | - | chr2_3:52210408-52210427 | None:intergenic | 35.0% | |
| GGGTTTAGAGAAAAGAAAAG+GGG | - | chr2_3:52210409-52210428 | None:intergenic | 35.0% | |
| GGGGTTTAGAGAAAAGAAAA+GGG | - | chr2_3:52210410-52210429 | None:intergenic | 35.0% | |
| AGGGGTTTAGAGAAAAGAAA+AGG | - | chr2_3:52210411-52210430 | None:intergenic | 35.0% | |
| CTTAGCCAGCTTCAATAAAT+TGG | + | chr2_3:52210493-52210512 | Msa0298320:CDS | 35.0% | |
| CAATAATCTCACTTCACTTG+AGG | + | chr2_3:52210535-52210554 | Msa0298320:CDS | 35.0% | |
| TATGGTGTAAAAGGGATTGA+GGG | + | chr2_3:52210643-52210662 | Msa0298320:intron | 35.0% | |
| ! | TTTGAAGTGGTTATCAGTTG+TGG | + | chr2_3:52210676-52210695 | Msa0298320:CDS | 35.0% |
| AAACATAACGCAATCCAAAC+GGG | + | chr2_3:52211057-52211076 | Msa0298320:intron | 35.0% | |
| CCGTATCATACTCTTAAAGT+GGG | - | chr2_3:52211208-52211227 | None:intergenic | 35.0% | |
| ! | CCCACTTTAAGAGTATGATA+CGG | + | chr2_3:52211205-52211224 | Msa0298320:intron | 35.0% |
| TCCGTATCATACTCTTAAAG+TGG | - | chr2_3:52211209-52211228 | None:intergenic | 35.0% | |
| AGTTAATTCCAATTGGATGC+TGG | + | chr2_3:52211234-52211253 | Msa0298320:intron | 35.0% | |
| ! | ATTTTACACCAGCATCCAAT+TGG | - | chr2_3:52211245-52211264 | None:intergenic | 35.0% |
| TTTAACGATCTGACTATCTG+AGG | - | chr2_3:52211376-52211395 | None:intergenic | 35.0% | |
| TGACCTTCTTCATACAACTT+TGG | - | chr2_3:52211497-52211516 | None:intergenic | 35.0% | |
| AAGTTGTATGAAGAAGGTCA+TGG | + | chr2_3:52211497-52211516 | Msa0298320:intron | 35.0% | |
| AACTAAACAATTCCACTTGG+TGG | - | chr2_3:52211614-52211633 | None:intergenic | 35.0% | |
| CGAAACTAAACAATTCCACT+TGG | - | chr2_3:52211617-52211636 | None:intergenic | 35.0% | |
| TTTATACGATCATGTGAACC+AGG | + | chr2_3:52212066-52212085 | Msa0298320:intron | 35.0% | |
| ! | TTTTTCCTGCATTTAGTACC+TGG | - | chr2_3:52212087-52212106 | None:intergenic | 35.0% |
| ACTTTCAAAATAGATGAGGC+TGG | - | chr2_3:52212198-52212217 | None:intergenic | 35.0% | |
| CATCTGATCAAGTTTGCAAA+TGG | - | chr2_3:52212342-52212361 | None:intergenic | 35.0% | |
| !! | AGTCTGAAAAAGATGGACTA+TGG | - | chr2_3:52212455-52212474 | None:intergenic | 35.0% |
| TCGCTAAAGTCTGAAAAAGA+TGG | - | chr2_3:52212462-52212481 | None:intergenic | 35.0% | |
| CTCTTCTTATAAAACCCCTT+GGG | - | chr2_3:52212726-52212745 | None:intergenic | 35.0% | |
| GCCAAATAATATCTTGCTGA+TGG | + | chr2_3:52212842-52212861 | Msa0298320:intron | 35.0% | |
| CTCAATCTGACAATGTGAAA+GGG | - | chr2_3:52213073-52213092 | None:intergenic | 35.0% | |
| CTTTCACATTGTCAGATTGA+GGG | + | chr2_3:52213072-52213091 | Msa0298320:CDS | 35.0% | |
| CAGTTCAACACAAAACTTGA+GGG | - | chr2_3:52213109-52213128 | None:intergenic | 35.0% | |
| TCAGTTCAACACAAAACTTG+AGG | - | chr2_3:52213110-52213129 | None:intergenic | 35.0% | |
| AGCTTCGGAATTTAGATTTG+GGG | + | chr2_3:52213347-52213366 | Msa0298320:CDS | 35.0% | |
| AGACAACGATAAAACGTTGT+TGG | - | chr2_3:52213426-52213445 | None:intergenic | 35.0% | |
| ! | CAATACAAGATGAAGGTACA+TGG | - | chr2_3:52213460-52213479 | None:intergenic | 35.0% |
| ACAGTTGCAATACAAGATGA+AGG | - | chr2_3:52213467-52213486 | None:intergenic | 35.0% | |
| TCATCTTGTATTGCAACTGT+AGG | + | chr2_3:52213467-52213486 | Msa0298320:intron | 35.0% | |
| ACTTTCTCATTTGTAGCAAC+AGG | - | chr2_3:52213540-52213559 | None:intergenic | 35.0% | |
| AGATCATGTCGATCAAAATG+AGG | + | chr2_3:52213766-52213785 | Msa0298320:CDS | 35.0% | |
| GGAAAATACAGGTCATAACA+AGG | + | chr2_3:52213883-52213902 | Msa0298320:CDS | 35.0% | |
| ACAGGTCATAACAAGGATAA+TGG | + | chr2_3:52213890-52213909 | Msa0298320:CDS | 35.0% | |
| ! | GTTGATTTATTCTTCGTGTC+AGG | - | chr2_3:52213953-52213972 | None:intergenic | 35.0% |
| AATGTCAGCAAATGAAGCTT+CGG | - | chr2_3:52214113-52214132 | None:intergenic | 35.0% | |
| GATCAGGAAAATCTGAATCA+TGG | + | chr2_3:52214145-52214164 | Msa0298320:CDS | 35.0% | |
| ! | AGACTCCACTTTATGCATTT+TGG | - | chr2_3:52214257-52214276 | None:intergenic | 35.0% |
| TCATCTCCAGTAACAGAAAT+TGG | + | chr2_3:52214280-52214299 | Msa0298320:CDS | 35.0% | |
| TCCAGTAACAGAAATTGGAA+TGG | + | chr2_3:52214285-52214304 | Msa0298320:CDS | 35.0% | |
| CCAGTAACAGAAATTGGAAT+GGG | + | chr2_3:52214286-52214305 | Msa0298320:CDS | 35.0% | |
| !! | CAGTAGGTTTTTAAGCATAG+CGG | - | chr2_3:52214357-52214376 | None:intergenic | 35.0% |
| TGAGTCAGTAAGAAAACAGT+AGG | - | chr2_3:52214373-52214392 | None:intergenic | 35.0% | |
| ATTGCATTTCTCCTTGTTCA+GGG | + | chr2_3:52214408-52214427 | Msa0298320:three_prime_UTR | 35.0% | |
| TCATAGTAGTCATGCAAAAG+GGG | - | chr2_3:52214728-52214747 | None:intergenic | 35.0% | |
| TGGCAAATGCAACAATATCT+TGG | + | chr2_3:52214851-52214870 | Msa0298320:three_prime_UTR | 35.0% | |
| ! | GGAAATTGAACTTGGATTGG+CGG | - | chr2_3:52210337-52210356 | None:intergenic | 40.0% |
| TTAGAGAAAAGAAAAGGGGG+TGG | - | chr2_3:52210405-52210424 | None:intergenic | 40.0% | |
| GTATGGTGTAAAAGGGATTG+AGG | + | chr2_3:52210642-52210661 | Msa0298320:intron | 40.0% | |
| ! | GGGCATGTGTTAATTTGAAG+TGG | + | chr2_3:52210663-52210682 | Msa0298320:CDS | 40.0% |
| GAAAGCTTGGAAGGAATTCA+AGG | + | chr2_3:52210710-52210729 | Msa0298320:CDS | 40.0% | |
| GTGGAATACACGGTTACTAT+TGG | - | chr2_3:52211168-52211187 | None:intergenic | 40.0% | |
| ! | AATTCCACTTGGTGGCAATT+TGG | - | chr2_3:52211606-52211625 | None:intergenic | 40.0% |
| GTAGAAACCTTTCATCTCAC+AGG | + | chr2_3:52211787-52211806 | Msa0298320:intron | 40.0% | |
| TGTTAAGCTTGTACAGAGAG+TGG | + | chr2_3:52211861-52211880 | Msa0298320:intron | 40.0% | |
| ! | TGCTGAGTTATTTCCCGAAA+CGG | + | chr2_3:52211889-52211908 | Msa0298320:intron | 40.0% |
| AAATGAAGAATCCCCGTTTC+GGG | - | chr2_3:52211905-52211924 | None:intergenic | 40.0% | |
| GAAATGAAGAATCCCCGTTT+CGG | - | chr2_3:52211906-52211925 | None:intergenic | 40.0% | |
| ATTCAAAATCAGTGCACGGA+GGG | - | chr2_3:52212149-52212168 | None:intergenic | 40.0% | |
| CACCATTCAAAATCAGTGCA+CGG | - | chr2_3:52212153-52212172 | None:intergenic | 40.0% | |
| TGCTGTGCTTTCATCACAAT+AGG | + | chr2_3:52212497-52212516 | Msa0298320:intron | 40.0% | |
| AGGATCAACAGTATTTCCCA+AGG | + | chr2_3:52212707-52212726 | Msa0298320:intron | 40.0% | |
| GGATCAACAGTATTTCCCAA+GGG | + | chr2_3:52212708-52212727 | Msa0298320:intron | 40.0% | |
| GATCAACAGTATTTCCCAAG+GGG | + | chr2_3:52212709-52212728 | Msa0298320:intron | 40.0% | |
| CCTCTTCTTATAAAACCCCT+TGG | - | chr2_3:52212727-52212746 | None:intergenic | 40.0% | |
| !! | CCAAGGGGTTTTATAAGAAG+AGG | + | chr2_3:52212724-52212743 | Msa0298320:intron | 40.0% |
| !! | AGGGGTTTTATAAGAAGAGG+AGG | + | chr2_3:52212727-52212746 | Msa0298320:intron | 40.0% |
| GAAGGTGAAATCCATCACAA+AGG | + | chr2_3:52212949-52212968 | Msa0298320:CDS | 40.0% | |
| GGCAAACATTACCTTTGTGA+TGG | - | chr2_3:52212963-52212982 | None:intergenic | 40.0% | |
| TAAAGGAGCTCAACAGCTTA+GGG | - | chr2_3:52212985-52213004 | None:intergenic | 40.0% | |
| CCTCAATCTGACAATGTGAA+AGG | - | chr2_3:52213074-52213093 | None:intergenic | 40.0% | |
| CCTTTCACATTGTCAGATTG+AGG | + | chr2_3:52213071-52213090 | Msa0298320:CDS | 40.0% | |
| !!! | AGGTGATCCCTTGCTTTTTT+TGG | + | chr2_3:52213568-52213587 | Msa0298320:intron | 40.0% |
| GCGTTGAATACTTGTAGCTT+TGG | - | chr2_3:52213677-52213696 | None:intergenic | 40.0% | |
| CAAGTGACCTTTCTCATTCT+TGG | - | chr2_3:52213720-52213739 | None:intergenic | 40.0% | |
| ATCTTGAAGCTGCTGACAAA+AGG | + | chr2_3:52213795-52213814 | Msa0298320:CDS | 40.0% | |
| AACTGTTGATGTATCCGAGA+AGG | + | chr2_3:52213841-52213860 | Msa0298320:CDS | 40.0% | |
| CTCTCGAGGAGAATGTTAAT+AGG | + | chr2_3:52214023-52214042 | Msa0298320:CDS | 40.0% | |
| CAGGAAAATCTGAATCATGG+TGG | + | chr2_3:52214148-52214167 | Msa0298320:CDS | 40.0% | |
| ATTTCAAATCCTTAGGCGCT+TGG | - | chr2_3:52214192-52214211 | None:intergenic | 40.0% | |
| GAGTGCCAAAATGCATAAAG+TGG | + | chr2_3:52214249-52214268 | Msa0298320:CDS | 40.0% | |
| CCCATTCCAATTTCTGTTAC+TGG | - | chr2_3:52214289-52214308 | None:intergenic | 40.0% | |
| GTAACAGAAATTGGAATGGG+AGG | + | chr2_3:52214289-52214308 | Msa0298320:CDS | 40.0% | |
| AATGGGAGGTTCATCAACAT+GGG | + | chr2_3:52214303-52214322 | Msa0298320:CDS | 40.0% | |
| CATTGCATTTCTCCTTGTTC+AGG | + | chr2_3:52214407-52214426 | Msa0298320:three_prime_UTR | 40.0% | |
| TGACCAGTATGAATCGAACT+CGG | + | chr2_3:52214469-52214488 | Msa0298320:three_prime_UTR | 40.0% | |
| AAACCATTTGTGCTAAACCC+AGG | + | chr2_3:52214529-52214548 | Msa0298320:three_prime_UTR | 40.0% | |
| AGAGACAAACATCACAAGCA+GGG | - | chr2_3:52214591-52214610 | None:intergenic | 40.0% | |
| AAGAGACAAACATCACAAGC+AGG | - | chr2_3:52214592-52214611 | None:intergenic | 40.0% | |
| ATGGTATACATCTGAACCAC+TGG | + | chr2_3:52214831-52214850 | Msa0298320:three_prime_UTR | 40.0% | |
| GATATTGTTGCATTTGCCAG+TGG | - | chr2_3:52214850-52214869 | None:intergenic | 40.0% | |
| TTCCTCACTGCACTCATTCA+AGG | - | chr2_3:52210268-52210287 | None:intergenic | 45.0% | |
| GCTGTCGTTCAATACTTGCT+CGG | - | chr2_3:52210310-52210329 | None:intergenic | 45.0% | |
| TTTGTGAGTGAGGTGAAGAC+TGG | - | chr2_3:52210358-52210377 | None:intergenic | 45.0% | |
| GGGTGGAAAGAAGGTTACAT+CGG | - | chr2_3:52210388-52210407 | None:intergenic | 45.0% | |
| AAGAAAAGGGGGTGGAAAGA+AGG | - | chr2_3:52210397-52210416 | None:intergenic | 45.0% | |
| TCTTGTGTTAAGGGCCTGTT+TGG | + | chr2_3:52210871-52210890 | Msa0298320:intron | 45.0% | |
| AGCATGACCTGTGAGATGAA+AGG | - | chr2_3:52211797-52211816 | None:intergenic | 45.0% | |
| ! | GCTGAGTTATTTCCCGAAAC+GGG | + | chr2_3:52211890-52211909 | Msa0298320:intron | 45.0% |
| ! | CTGAGTTATTTCCCGAAACG+GGG | + | chr2_3:52211891-52211910 | Msa0298320:intron | 45.0% |
| GTGAACCAGGTACTAAATGC+AGG | + | chr2_3:52212079-52212098 | Msa0298320:intron | 45.0% | |
| CATTCAAAATCAGTGCACGG+AGG | - | chr2_3:52212150-52212169 | None:intergenic | 45.0% | |
| !!! | CTCCGTGCACTGATTTTGAA+TGG | + | chr2_3:52212148-52212167 | Msa0298320:CDS | 45.0% |
| CTGCTAGCGCAGAAAATCTT+AGG | - | chr2_3:52212420-52212439 | None:intergenic | 45.0% | |
| ! | CTAAGATTTTCTGCGCTAGC+AGG | + | chr2_3:52212418-52212437 | Msa0298320:intron | 45.0% |
| AAAGGAGCTCAACAGCTTAG+GGG | - | chr2_3:52212984-52213003 | None:intergenic | 45.0% | |
| CTAAAGGAGCTCAACAGCTT+AGG | - | chr2_3:52212986-52213005 | None:intergenic | 45.0% | |
| GACAATGTGAAAGGGAAAGC+TGG | - | chr2_3:52213065-52213084 | None:intergenic | 45.0% | |
| GTTGATGTATCCGAGAAGGA+AGG | + | chr2_3:52213845-52213864 | Msa0298320:CDS | 45.0% | |
| ATGTATCCGAGAAGGAAGGT+GGG | + | chr2_3:52213849-52213868 | Msa0298320:CDS | 45.0% | |
| TTGGCACTCTTATGCTTGAC+AGG | - | chr2_3:52214238-52214257 | None:intergenic | 45.0% | |
| GAATGGGAGGTTCATCAACA+TGG | + | chr2_3:52214302-52214321 | Msa0298320:CDS | 45.0% | |
| ATGGGAGGTTCATCAACATG+GGG | + | chr2_3:52214304-52214323 | Msa0298320:CDS | 45.0% | |
| GTACCGAGTTCGATTCATAC+TGG | - | chr2_3:52214475-52214494 | None:intergenic | 45.0% | |
| TGAATCGAACTCGGTACTCT+AGG | + | chr2_3:52214478-52214497 | Msa0298320:three_prime_UTR | 45.0% | |
| GAATCGAACTCGGTACTCTA+GGG | + | chr2_3:52214479-52214498 | Msa0298320:three_prime_UTR | 45.0% | |
| ! | TCACATATTAGCCTCCACCT+GGG | - | chr2_3:52214549-52214568 | None:intergenic | 45.0% |
| ! | TTCACATATTAGCCTCCACC+TGG | - | chr2_3:52214550-52214569 | None:intergenic | 45.0% |
| AGTAGTCATGCAAAAGGGGA+GGG | - | chr2_3:52214724-52214743 | None:intergenic | 45.0% | |
| TAGTAGTCATGCAAAAGGGG+AGG | - | chr2_3:52214725-52214744 | None:intergenic | 45.0% | |
| TGCCTTGAATGAGTGCAGTG+AGG | + | chr2_3:52210263-52210282 | Msa0298320:five_prime_UTR | 50.0% | |
| ! | CGGAAAGAGCTTTGTGAGTG+AGG | - | chr2_3:52210368-52210387 | None:intergenic | 50.0% |
| GCTGGCTAAGCATGATACCT+GGG | - | chr2_3:52210483-52210502 | None:intergenic | 50.0% | |
| AGCTGGCTAAGCATGATACC+TGG | - | chr2_3:52210484-52210503 | None:intergenic | 50.0% | |
| ! | TAGCACGTTTAGGACCCGTT+TGG | - | chr2_3:52211074-52211093 | None:intergenic | 50.0% |
| TTGGCCAAATTGCCACCAAG+TGG | + | chr2_3:52211599-52211618 | Msa0298320:intron | 50.0% | |
| TCCTATCCGTAAGATTGGCG+AGG | + | chr2_3:52212919-52212938 | Msa0298320:CDS | 50.0% | |
| TCAGAGCCTCGCCAATCTTA+CGG | - | chr2_3:52212928-52212947 | None:intergenic | 50.0% | |
| GGGAAAGCTGGAACCAAAAG+AGG | - | chr2_3:52213053-52213072 | None:intergenic | 50.0% | |
| GATGTATCCGAGAAGGAAGG+TGG | + | chr2_3:52213848-52213867 | Msa0298320:CDS | 50.0% | |
| TGTATCCGAGAAGGAAGGTG+GGG | + | chr2_3:52213850-52213869 | Msa0298320:CDS | 50.0% | |
| ATAGACCCCACCTTCCTTCT+CGG | - | chr2_3:52213858-52213877 | None:intergenic | 50.0% | |
| GGAAGGTGGGGTCTATGATA+AGG | + | chr2_3:52213862-52213881 | Msa0298320:CDS | 50.0% | |
| !!! | AGAGCCAACGCTTTTTCCGA+GGG | - | chr2_3:52214007-52214026 | None:intergenic | 50.0% |
| AACTGTGCTCACCCTGAACA+AGG | - | chr2_3:52214422-52214441 | None:intergenic | 50.0% | |
| CCACCTGGGTTTAGCACAAA+TGG | - | chr2_3:52214535-52214554 | None:intergenic | 50.0% | |
| CCATTTGTGCTAAACCCAGG+TGG | + | chr2_3:52214532-52214551 | Msa0298320:three_prime_UTR | 50.0% | |
| TTTGTGCTAAACCCAGGTGG+AGG | + | chr2_3:52214535-52214554 | Msa0298320:three_prime_UTR | 50.0% | |
| GTAGTCATGCAAAAGGGGAG+GGG | - | chr2_3:52214723-52214742 | None:intergenic | 50.0% | |
| GCCTCGCCAATCTTACGGAT+AGG | - | chr2_3:52212923-52212942 | None:intergenic | 55.0% | |
| !! | GATTGGCGAGGCTCTGAAGA+AGG | + | chr2_3:52212931-52212950 | Msa0298320:CDS | 55.0% |
| ! | CAAGCCCTCGGAAAAAGCGT+TGG | + | chr2_3:52214000-52214019 | Msa0298320:CDS | 55.0% |
| !!! | GAGAGCCAACGCTTTTTCCG+AGG | - | chr2_3:52214008-52214027 | None:intergenic | 55.0% |
| !! | GGAAAAAGCGTTGGCTCTCG+AGG | + | chr2_3:52214009-52214028 | Msa0298320:CDS | 55.0% |
| GCTACAGAACCAAGCGCCTA+AGG | + | chr2_3:52214180-52214199 | Msa0298320:CDS | 55.0% | |
| AAAGGACGACGGCAAGCCCT+CGG | + | chr2_3:52213988-52214007 | Msa0298320:CDS | 60.0% | |
| CATGCAAAAGGGGAGGGGAG+AGG | - | chr2_3:52214718-52214737 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 52210244 | 52214901 | 52210244 | ID=Msa0298320;Name=Msa0298320 |
| chr2_3 | mRNA | 52210244 | 52214901 | 52210244 | ID=Msa0298320-mRNA-1;Parent=Msa0298320;Name=Msa0298320-mRNA-1;_AED=0.05;_eAED=0.05;_QI=47|1|1|1|1|1|10|568|468 |
| chr2_3 | exon | 52210244 | 52210389 | 52210244 | ID=Msa0298320-mRNA-1:exon:16676;Parent=Msa0298320-mRNA-1 |
| chr2_3 | exon | 52210485 | 52210556 | 52210485 | ID=Msa0298320-mRNA-1:exon:16677;Parent=Msa0298320-mRNA-1 |
| chr2_3 | exon | 52210656 | 52210748 | 52210656 | ID=Msa0298320-mRNA-1:exon:16678;Parent=Msa0298320-mRNA-1 |
| chr2_3 | exon | 52212088 | 52212169 | 52212088 | ID=Msa0298320-mRNA-1:exon:16679;Parent=Msa0298320-mRNA-1 |
| chr2_3 | exon | 52212324 | 52212380 | 52212324 | ID=Msa0298320-mRNA-1:exon:16680;Parent=Msa0298320-mRNA-1 |
| chr2_3 | exon | 52212906 | 52212970 | 52212906 | ID=Msa0298320-mRNA-1:exon:16681;Parent=Msa0298320-mRNA-1 |
| chr2_3 | exon | 52213066 | 52213161 | 52213066 | ID=Msa0298320-mRNA-1:exon:16682;Parent=Msa0298320-mRNA-1 |
| chr2_3 | exon | 52213316 | 52213402 | 52213316 | ID=Msa0298320-mRNA-1:exon:16683;Parent=Msa0298320-mRNA-1 |
| chr2_3 | exon | 52213489 | 52213569 | 52213489 | ID=Msa0298320-mRNA-1:exon:16684;Parent=Msa0298320-mRNA-1 |
| chr2_3 | exon | 52213659 | 52214901 | 52213659 | ID=Msa0298320-mRNA-1:exon:16685;Parent=Msa0298320-mRNA-1 |
| chr2_3 | five_prime_UTR | 52210244 | 52210290 | 52210244 | ID=Msa0298320-mRNA-1:five_prime_utr;Parent=Msa0298320-mRNA-1 |
| chr2_3 | CDS | 52210291 | 52210389 | 52210291 | ID=Msa0298320-mRNA-1:cds;Parent=Msa0298320-mRNA-1 |
| chr2_3 | CDS | 52210485 | 52210556 | 52210485 | ID=Msa0298320-mRNA-1:cds;Parent=Msa0298320-mRNA-1 |
| chr2_3 | CDS | 52210656 | 52210748 | 52210656 | ID=Msa0298320-mRNA-1:cds;Parent=Msa0298320-mRNA-1 |
| chr2_3 | CDS | 52212088 | 52212169 | 52212088 | ID=Msa0298320-mRNA-1:cds;Parent=Msa0298320-mRNA-1 |
| chr2_3 | CDS | 52212324 | 52212380 | 52212324 | ID=Msa0298320-mRNA-1:cds;Parent=Msa0298320-mRNA-1 |
| chr2_3 | CDS | 52212906 | 52212970 | 52212906 | ID=Msa0298320-mRNA-1:cds;Parent=Msa0298320-mRNA-1 |
| chr2_3 | CDS | 52213066 | 52213161 | 52213066 | ID=Msa0298320-mRNA-1:cds;Parent=Msa0298320-mRNA-1 |
| chr2_3 | CDS | 52213316 | 52213402 | 52213316 | ID=Msa0298320-mRNA-1:cds;Parent=Msa0298320-mRNA-1 |
| chr2_3 | CDS | 52213489 | 52213569 | 52213489 | ID=Msa0298320-mRNA-1:cds;Parent=Msa0298320-mRNA-1 |
| chr2_3 | CDS | 52213659 | 52214333 | 52213659 | ID=Msa0298320-mRNA-1:cds;Parent=Msa0298320-mRNA-1 |
| chr2_3 | three_prime_UTR | 52214334 | 52214901 | 52214334 | ID=Msa0298320-mRNA-1:three_prime_utr;Parent=Msa0298320-mRNA-1 |
| Gene Sequence |
| Protein sequence |
