Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0233990 | XP_003593539.1 | 82.698 | 341 | 15 | 3 | 1 | 297 | 2 | 342 | 0.0 | 548 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0233990 | sp|Q7PCC4|ANRCH_VITVI | 30.275 | 327 | 186 | 5 | 8 | 295 | 13 | 336 | 4.00e-49 | 169 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0233990 | G7IPP5 | 82.698 | 341 | 15 | 3 | 1 | 297 | 2 | 342 | 0.0 | 548 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0044250 | Msa0233990 | 0.801529 | 8.626571e-49 | -8.615850e-47 |
| Msa0078080 | Msa0233990 | 0.821528 | 3.847949e-53 | -8.615850e-47 |
| Msa0090760 | Msa0233990 | 0.801233 | 9.919865e-49 | -8.615850e-47 |
| Msa0233990 | Msa0312570 | 0.811871 | 5.636458e-51 | -8.615850e-47 |
| Msa0233990 | Msa0516330 | 0.803288 | 3.743852e-49 | -8.615850e-47 |
| Msa0233990 | Msa0677590 | 0.818181 | 2.240925e-52 | -8.615850e-47 |
| Msa0233990 | Msa0749900 | 0.806728 | 7.143647e-50 | -8.615850e-47 |
| Msa0233990 | Msa0830120 | 0.811843 | 5.715010e-51 | -8.615850e-47 |
| Msa0233990 | Msa0830450 | 0.810463 | 1.138366e-50 | -8.615850e-47 |
| Msa0233990 | Msa1437650 | 0.806540 | 7.827985e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0233990 | MtrunA17_Chr2g0281991 | 82.698 | 341 | 15 | 3 | 1 | 297 | 2 | 342 | 0.0 | 548 |
| Msa0233990 | MtrunA17_Chr2g0282001 | 73.607 | 341 | 46 | 3 | 1 | 297 | 1 | 341 | 9.73e-176 | 489 |
| Msa0233990 | MtrunA17_Chr2g0282011 | 77.419 | 341 | 33 | 3 | 1 | 297 | 2 | 342 | 1.90e-175 | 489 |
| Msa0233990 | MtrunA17_Chr7g0275521 | 53.372 | 341 | 112 | 5 | 1 | 295 | 1 | 340 | 9.69e-118 | 342 |
| Msa0233990 | MtrunA17_Chr7g0245731 | 33.739 | 329 | 168 | 7 | 2 | 290 | 53 | 371 | 1.73e-54 | 181 |
| Msa0233990 | MtrunA17_Chr1g0155411 | 34.441 | 331 | 170 | 7 | 7 | 299 | 8 | 329 | 2.01e-53 | 177 |
| Msa0233990 | MtrunA17_Chr7g0245741 | 33.631 | 336 | 169 | 8 | 2 | 295 | 3 | 326 | 3.07e-52 | 174 |
| Msa0233990 | MtrunA17_Chr7g0245641 | 33.628 | 339 | 168 | 8 | 2 | 295 | 40 | 366 | 6.55e-52 | 174 |
| Msa0233990 | MtrunA17_Chr7g0245671 | 34.513 | 339 | 157 | 9 | 6 | 295 | 7 | 329 | 9.34e-52 | 173 |
| Msa0233990 | MtrunA17_Chr7g0245691 | 33.728 | 338 | 170 | 7 | 2 | 295 | 3 | 330 | 1.46e-50 | 170 |
| Msa0233990 | MtrunA17_Chr4g0048961 | 30.581 | 327 | 185 | 5 | 6 | 293 | 13 | 336 | 3.50e-49 | 166 |
| Msa0233990 | MtrunA17_Chr7g0245631 | 32.229 | 332 | 179 | 7 | 2 | 295 | 3 | 326 | 3.35e-48 | 163 |
| Msa0233990 | MtrunA17_Chr1g0155431 | 33.433 | 335 | 174 | 8 | 7 | 301 | 8 | 333 | 4.99e-48 | 163 |
| Msa0233990 | MtrunA17_Chr4g0042101 | 30.211 | 331 | 180 | 6 | 4 | 288 | 21 | 346 | 5.54e-40 | 143 |
| Msa0233990 | MtrunA17_Chr7g0245711 | 30.769 | 286 | 149 | 6 | 44 | 290 | 8 | 283 | 2.05e-38 | 137 |
| Msa0233990 | MtrunA17_Chr4g0010991 | 29.573 | 328 | 186 | 8 | 7 | 295 | 8 | 329 | 7.66e-38 | 136 |
| Msa0233990 | MtrunA17_Chr5g0423551 | 28.528 | 326 | 184 | 7 | 8 | 295 | 5 | 319 | 1.82e-34 | 127 |
| Msa0233990 | MtrunA17_Chr3g0106111 | 31.077 | 325 | 180 | 10 | 4 | 293 | 2 | 317 | 6.68e-32 | 120 |
| Msa0233990 | MtrunA17_Chr2g0331211 | 28.221 | 326 | 194 | 8 | 6 | 298 | 4 | 322 | 1.81e-31 | 119 |
| Msa0233990 | MtrunA17_Chr3g0077231 | 31.915 | 282 | 143 | 7 | 7 | 251 | 6 | 275 | 5.42e-30 | 115 |
| Msa0233990 | MtrunA17_Chr5g0431311 | 30.675 | 326 | 180 | 11 | 7 | 296 | 5 | 320 | 4.20e-29 | 113 |
| Msa0233990 | MtrunA17_Chr4g0039321 | 30.545 | 275 | 156 | 5 | 7 | 251 | 9 | 278 | 9.24e-29 | 112 |
| Msa0233990 | MtrunA17_Chr3g0077221 | 29.286 | 280 | 153 | 5 | 7 | 251 | 10 | 279 | 9.41e-29 | 112 |
| Msa0233990 | MtrunA17_Chr8g0364051 | 30.686 | 277 | 152 | 5 | 7 | 251 | 8 | 276 | 1.15e-28 | 112 |
| Msa0233990 | MtrunA17_Chr8g0363831 | 29.242 | 277 | 156 | 4 | 7 | 251 | 9 | 277 | 1.17e-27 | 109 |
| Msa0233990 | MtrunA17_Chr4g0039311 | 29.181 | 281 | 152 | 7 | 7 | 251 | 11 | 280 | 1.89e-26 | 106 |
| Msa0233990 | MtrunA17_Chr2g0291541 | 29.878 | 328 | 170 | 12 | 7 | 292 | 10 | 319 | 1.17e-25 | 104 |
| Msa0233990 | MtrunA17_Chr4g0001321 | 26.959 | 319 | 198 | 9 | 7 | 297 | 17 | 328 | 7.49e-25 | 102 |
| Msa0233990 | MtrunA17_Chr4g0002661 | 27.439 | 328 | 184 | 12 | 6 | 295 | 12 | 323 | 1.65e-22 | 95.5 |
| Msa0233990 | MtrunA17_Chr4g0002961 | 28.135 | 327 | 183 | 10 | 6 | 295 | 12 | 323 | 6.86e-22 | 93.6 |
| Msa0233990 | MtrunA17_Chr2g0333781 | 38.889 | 126 | 71 | 4 | 7 | 132 | 20 | 139 | 6.80e-18 | 82.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0233990 | AT5G42800.1 | 32.727 | 330 | 173 | 7 | 7 | 297 | 8 | 327 | 3.74e-48 | 165 |
| Msa0233990 | AT2G45400.1 | 32.229 | 332 | 175 | 8 | 7 | 295 | 40 | 364 | 6.61e-45 | 156 |
| Msa0233990 | AT1G61720.1 | 30.699 | 329 | 186 | 6 | 4 | 293 | 10 | 335 | 9.50e-45 | 155 |
| Msa0233990 | AT4G27250.1 | 30.838 | 334 | 176 | 8 | 3 | 286 | 9 | 337 | 1.26e-41 | 147 |
| Msa0233990 | AT4G27250.2 | 30.606 | 330 | 172 | 8 | 3 | 286 | 9 | 327 | 2.00e-40 | 144 |
| Msa0233990 | AT2G45400.2 | 32.862 | 283 | 142 | 7 | 7 | 248 | 40 | 315 | 3.65e-40 | 143 |
| Msa0233990 | AT1G68540.1 | 29.755 | 326 | 180 | 7 | 9 | 295 | 6 | 321 | 8.45e-36 | 131 |
| Msa0233990 | AT4G35420.1 | 29.231 | 325 | 191 | 5 | 6 | 298 | 7 | 324 | 3.06e-35 | 130 |
| Msa0233990 | AT2G45400.3 | 30.844 | 308 | 162 | 8 | 29 | 295 | 10 | 307 | 2.32e-33 | 124 |
| Msa0233990 | AT1G09510.1 | 33.684 | 285 | 134 | 8 | 7 | 251 | 8 | 277 | 2.43e-33 | 125 |
| Msa0233990 | AT5G19440.1 | 31.429 | 280 | 147 | 5 | 7 | 251 | 10 | 279 | 6.06e-33 | 124 |
| Msa0233990 | AT1G51410.1 | 30.175 | 285 | 154 | 5 | 2 | 251 | 4 | 278 | 6.49e-32 | 121 |
| Msa0233990 | AT1G66800.1 | 34.657 | 277 | 128 | 10 | 7 | 246 | 8 | 268 | 7.57e-32 | 120 |
| Msa0233990 | AT1G09500.3 | 32.517 | 286 | 137 | 8 | 7 | 251 | 8 | 278 | 9.95e-32 | 119 |
| Msa0233990 | AT1G09500.1 | 32.517 | 286 | 137 | 8 | 7 | 251 | 8 | 278 | 2.32e-31 | 119 |
| Msa0233990 | AT1G09480.2 | 32.857 | 280 | 133 | 9 | 7 | 246 | 8 | 272 | 2.19e-30 | 117 |
| Msa0233990 | AT5G58490.1 | 29.697 | 330 | 178 | 10 | 7 | 296 | 9 | 324 | 2.42e-30 | 117 |
| Msa0233990 | AT1G09480.1 | 32.857 | 280 | 133 | 9 | 7 | 246 | 55 | 319 | 4.52e-30 | 117 |
| Msa0233990 | AT1G09490.1 | 32.632 | 285 | 135 | 11 | 7 | 250 | 8 | 276 | 1.66e-29 | 114 |
| Msa0233990 | AT1G25460.1 | 29.102 | 323 | 184 | 6 | 9 | 295 | 6 | 319 | 2.37e-29 | 114 |
| Msa0233990 | AT2G45400.4 | 32.524 | 206 | 102 | 3 | 7 | 175 | 40 | 245 | 7.83e-29 | 111 |
| Msa0233990 | AT1G80820.1 | 26.646 | 319 | 199 | 9 | 7 | 297 | 8 | 319 | 4.07e-26 | 105 |
| Msa0233990 | AT1G15950.3 | 28.616 | 318 | 192 | 11 | 7 | 296 | 13 | 323 | 5.69e-26 | 105 |
| Msa0233990 | AT1G15950.1 | 28.616 | 318 | 192 | 11 | 7 | 296 | 13 | 323 | 5.69e-26 | 105 |
| Msa0233990 | AT2G02400.1 | 28.086 | 324 | 187 | 10 | 7 | 295 | 6 | 318 | 3.18e-25 | 103 |
| Msa0233990 | AT1G15950.2 | 27.914 | 326 | 197 | 10 | 7 | 300 | 13 | 332 | 4.53e-25 | 103 |
| Msa0233990 | AT1G15950.6 | 30.000 | 270 | 158 | 9 | 7 | 251 | 13 | 276 | 1.66e-24 | 100 |
| Msa0233990 | AT1G76470.1 | 28.049 | 328 | 187 | 10 | 6 | 295 | 6 | 322 | 2.14e-24 | 100 |
| Msa0233990 | AT1G15950.4 | 29.520 | 271 | 160 | 9 | 7 | 252 | 13 | 277 | 4.78e-24 | 99.4 |
| Msa0233990 | AT1G15950.5 | 29.520 | 271 | 160 | 9 | 7 | 252 | 13 | 277 | 4.99e-24 | 99.4 |
| Msa0233990 | AT1G80820.2 | 27.407 | 270 | 165 | 7 | 7 | 251 | 8 | 271 | 9.97e-24 | 98.2 |
| Msa0233990 | AT2G33590.1 | 26.748 | 329 | 180 | 12 | 6 | 292 | 8 | 317 | 9.88e-22 | 93.6 |
| Msa0233990 | AT2G33600.1 | 26.875 | 320 | 191 | 10 | 6 | 292 | 8 | 317 | 3.08e-20 | 89.4 |
| Msa0233990 | AT1G09490.2 | 28.458 | 253 | 124 | 11 | 39 | 250 | 9 | 245 | 1.52e-14 | 72.8 |
| Msa0233990 | AT1G68540.2 | 29.070 | 172 | 106 | 4 | 130 | 295 | 53 | 214 | 2.64e-12 | 65.5 |
| Msa0233990 | AT4G33360.2 | 23.693 | 287 | 149 | 11 | 4 | 248 | 12 | 270 | 1.33e-11 | 64.7 |
| Msa0233990 | AT4G33360.1 | 24.042 | 287 | 148 | 11 | 4 | 248 | 12 | 270 | 1.99e-11 | 64.3 |
| Msa0233990 | AT4G33360.3 | 23.860 | 285 | 147 | 11 | 6 | 248 | 2 | 258 | 2.35e-11 | 63.9 |
Find 75 sgRNAs with CRISPR-Local
Find 447 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTATCGATGTTATCTATTT+TGG | 0.117439 | 2_2:-6454105 | None:intergenic |
| GGCATTTGGTTGTAGGTATT+TGG | 0.203788 | 2_2:+6453919 | Msa0233990:intron |
| TTCTCCTTCAAATTGAATTC+TGG | 0.221169 | 2_2:-6453647 | None:intergenic |
| GCCAATTTGATTGCCCTGTT+TGG | 0.259984 | 2_2:-6453947 | None:intergenic |
| ATCTATCAATGGCAGATTCT+TGG | 0.286062 | 2_2:+6453568 | Msa0233990:CDS |
| AGTTATTGTAAAGATGAAAA+TGG | 0.286181 | 2_2:+6453335 | Msa0233990:CDS |
| AATGCATTATCTAGTAAATA+TGG | 0.292838 | 2_2:-6447616 | None:intergenic |
| GAGGTTGTAAGTCTGGTTCT+TGG | 0.305988 | 2_2:+6453362 | Msa0233990:CDS |
| TCTCCTAGTCAAGAAGCTTT+TGG | 0.309271 | 2_2:+6447767 | Msa0233990:CDS |
| GAACTTCAAAGATTGGTATA+AGG | 0.314127 | 2_2:-6453465 | None:intergenic |
| ACAGGTGGTGCTGGTTATAT+TGG | 0.319946 | 2_2:+6447741 | Msa0233990:CDS |
| AGCTGCAAGGTGTGTGTTAC+AGG | 0.325911 | 2_2:+6447723 | Msa0233990:CDS |
| GAAGCTCAGCGCAAAAGATA+TGG | 0.327753 | 2_2:-6453544 | None:intergenic |
| AATTCACAGCCTTGAATTGC+AGG | 0.333722 | 2_2:-6448155 | None:intergenic |
| GCCAAACAGGGCAATCAAAT+TGG | 0.343212 | 2_2:+6453946 | Msa0233990:CDS |
| TCAACAAAGCTCATAGATAA+TGG | 0.362344 | 2_2:+6453971 | Msa0233990:CDS |
| GGTAACCACTGCAACACTTC+CGG | 0.365252 | 2_2:-6453420 | None:intergenic |
| TGGATTTGAGGTTGTAAGTC+TGG | 0.366851 | 2_2:+6453355 | Msa0233990:CDS |
| CTTCTAAGAACTTCAAAGAT+TGG | 0.381189 | 2_2:-6453472 | None:intergenic |
| ATGAGAAACTAGAAAGTGAT+TGG | 0.381653 | 2_2:-6454211 | None:intergenic |
| ACATCATCAATGTGGACAAT+TGG | 0.383843 | 2_2:-6453512 | None:intergenic |
| TTCTCTTTCTGCTAATGTCT+TGG | 0.388769 | 2_2:-6453303 | None:intergenic |
| GGTATTTGGAAGGGCCAAAC+AGG | 0.395355 | 2_2:+6453933 | Msa0233990:intron |
| AGAATCAGTTTGATGTAGAT+AGG | 0.396421 | 2_2:-6448198 | None:intergenic |
| AGTCTGGTTCTTGGCCTAGT+TGG | 0.397646 | 2_2:+6453371 | Msa0233990:CDS |
| GTAACCACTGCAACACTTCC+GGG | 0.405455 | 2_2:-6453419 | None:intergenic |
| CTGGTTCTTGGCCTAGTTGG+AGG | 0.414290 | 2_2:+6453374 | Msa0233990:CDS |
| GCCTCTCAGAAAGCTGACTT+TGG | 0.417578 | 2_2:-6448066 | None:intergenic |
| AAGAATCTGCCATTGATAGA+TGG | 0.431452 | 2_2:-6453566 | None:intergenic |
| TCCACATGCAAATACAAGAT+TGG | 0.441027 | 2_2:+6448091 | Msa0233990:CDS |
| GTATCCAGAATTCAATTTGA+AGG | 0.444317 | 2_2:+6453643 | Msa0233990:CDS |
| TGGTTCTTGGCCTAGTTGGA+GGG | 0.447322 | 2_2:+6453375 | Msa0233990:CDS |
| TCTACATCAAACTGATTCTC+AGG | 0.459043 | 2_2:+6448202 | Msa0233990:CDS |
| TGAGAAACTAGAAAGTGATT+GGG | 0.461498 | 2_2:-6454210 | None:intergenic |
| TTTGGTTGTAGGTATTTGGA+AGG | 0.479074 | 2_2:+6453923 | Msa0233990:intron |
| CTTCCGGGTATGTGATTAAG+AGG | 0.483008 | 2_2:-6453404 | None:intergenic |
| TAAAGATGAAAATGGATTTG+AGG | 0.491614 | 2_2:+6453343 | Msa0233990:CDS |
| ATCAGATGCGCAAGAAGGAC+CGG | 0.507931 | 2_2:+6454037 | Msa0233990:CDS |
| AGTTAGATTATTATCAGTGA+TGG | 0.510789 | 2_2:+6447695 | Msa0233990:exon |
| TTTCCAAAAGCTTCTTGACT+AGG | 0.510906 | 2_2:-6447770 | None:intergenic |
| GTGTGTGTTACAGGTGGTGC+TGG | 0.512366 | 2_2:+6447732 | Msa0233990:CDS |
| ATAGAGGAAGCAGCAATAGC+AGG | 0.513585 | 2_2:+6448551 | Msa0233990:CDS |
| GGTTCTTGGCCTAGTTGGAG+GGG | 0.520952 | 2_2:+6453376 | Msa0233990:CDS |
| AAGTTCTTAGAAGATATATG+TGG | 0.532126 | 2_2:+6453482 | Msa0233990:CDS |
| AAGCTCAGCGCAAAAGATAT+GGG | 0.550260 | 2_2:-6453543 | None:intergenic |
| TGTTTATTCACTATTGTGTG+TGG | 0.555177 | 2_2:+6447638 | Msa0233990:five_prime_UTR |
| GAATCAGTTTGATGTAGATA+GGG | 0.556532 | 2_2:-6448197 | None:intergenic |
| GATTATTATCAGTGATGGAA+AGG | 0.557631 | 2_2:+6447700 | Msa0233990:exon |
| GTGATTGGGGCAAGGCCGCA+AGG | 0.561123 | 2_2:-6454196 | None:intergenic |
| ACCAATCTTGTATTTGCATG+TGG | 0.567821 | 2_2:-6448092 | None:intergenic |
| GCTGAGCTTCCATCTATCAA+TGG | 0.568079 | 2_2:+6453557 | Msa0233990:CDS |
| TGATATAATACTAAGATCGC+CGG | 0.579084 | 2_2:-6454056 | None:intergenic |
| GAGGTGTCTCCCCTCCAACT+AGG | 0.581396 | 2_2:-6453385 | None:intergenic |
| ATAACATCGATAATTTATGT+TGG | 0.585180 | 2_2:+6454114 | Msa0233990:three_prime_UTR |
| AATACTCAAGTTTCTGAGAG+TGG | 0.592377 | 2_2:-6447811 | None:intergenic |
| AGTTTGATGTAGATAGGGAG+TGG | 0.593081 | 2_2:-6448192 | None:intergenic |
| TGATTGGGGCAAGGCCGCAA+GGG | 0.599863 | 2_2:-6454195 | None:intergenic |
| GAGAAACTAGAAAGTGATTG+GGG | 0.613764 | 2_2:-6454209 | None:intergenic |
| TTGGTTGTAGGTATTTGGAA+GGG | 0.624812 | 2_2:+6453924 | Msa0233990:intron |
| AGGACAGTTTAAGAGCATAG+AGG | 0.626813 | 2_2:+6448535 | Msa0233990:intron |
| TCAAGTTTCTGAGAGTGGCA+TGG | 0.630524 | 2_2:-6447806 | None:intergenic |
| TGCAAGGTGTGTGTTACAGG+TGG | 0.636996 | 2_2:+6447726 | Msa0233990:CDS |
| GTGAGAAGACTGATATACAC+TGG | 0.639259 | 2_2:+6448614 | Msa0233990:CDS |
| ATAGTATCAGATGCGCAAGA+AGG | 0.643882 | 2_2:+6454032 | Msa0233990:CDS |
| GTAGATAGGGAGTGGCAACA+TGG | 0.645401 | 2_2:-6448184 | None:intergenic |
| ACTAGAAAGTGATTGGGGCA+AGG | 0.647963 | 2_2:-6454204 | None:intergenic |
| ACACCTCTTAATCACATACC+CGG | 0.648523 | 2_2:+6453401 | Msa0233990:CDS |
| AGTGATGGAAAGGAGCTGCA+AGG | 0.651284 | 2_2:+6447710 | Msa0233990:exon |
| ATATGTTAGATCATTGTGAG+TGG | 0.657002 | 2_2:+6447669 | Msa0233990:five_prime_UTR |
| TCCAAAGTCAGCTTTCTGAG+AGG | 0.659613 | 2_2:+6448065 | Msa0233990:CDS |
| CATACCCGGAAGTGTTGCAG+TGG | 0.678056 | 2_2:+6453415 | Msa0233990:CDS |
| GTATTTGGAAGGGCCAAACA+GGG | 0.681836 | 2_2:+6453934 | Msa0233990:CDS |
| CTTCACAAACATCATCAATG+TGG | 0.699944 | 2_2:-6453520 | None:intergenic |
| AGAGAGTGTCTCTTCCCTTG+CGG | 0.701058 | 2_2:+6454181 | Msa0233990:three_prime_UTR |
| ACTGATATACACTGGCACCG+TGG | 0.763689 | 2_2:+6448622 | Msa0233990:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTAATTAAATATAAA+CGG | + | chr2_2:6447960-6447979 | Msa0233990:intron | 0.0% |
| !! | CTAAAAAAAATTGAAAAAAA+TGG | - | chr2_2:6447892-6447911 | None:intergenic | 10.0% |
| !!! | TTTTATTTTATTTGAATTGA+AGG | + | chr2_2:6449234-6449253 | Msa0233990:intron | 10.0% |
| !!! | AAATTTTATTAAGCAAATTA+AGG | + | chr2_2:6450632-6450651 | Msa0233990:intron | 10.0% |
| !!! | TTAGTTTTAATTTTTCATTT+TGG | - | chr2_2:6452257-6452276 | None:intergenic | 10.0% |
| !!! | AATTTTTAGAATTTTAAACA+GGG | + | chr2_2:6452493-6452512 | Msa0233990:intron | 10.0% |
| !!! | TTATGGTTAATTATTTTTTT+AGG | + | chr2_2:6453268-6453287 | Msa0233990:intron | 10.0% |
| !! | AAAAAATTGAAAAAAATGGA+TGG | - | chr2_2:6447888-6447907 | None:intergenic | 15.0% |
| !! | AAGAGTAATAATCAATATTT+GGG | - | chr2_2:6448235-6448254 | None:intergenic | 15.0% |
| !! | AAAGAGTAATAATCAATATT+TGG | - | chr2_2:6448236-6448255 | None:intergenic | 15.0% |
| !!! | ATTTTTTTTTCTTTCCAATT+TGG | + | chr2_2:6448826-6448845 | Msa0233990:intron | 15.0% |
| !!! | ATAACATATAAGATGATTTT+AGG | - | chr2_2:6448914-6448933 | None:intergenic | 15.0% |
| !!! | TTCTTCATTTAATAACTTTT+AGG | - | chr2_2:6449188-6449207 | None:intergenic | 15.0% |
| !! | AAAGTTATTAAATGAAGAAT+TGG | + | chr2_2:6449189-6449208 | Msa0233990:intron | 15.0% |
| !!! | AACAAAAACAAAAACATTTT+TGG | - | chr2_2:6449318-6449337 | None:intergenic | 15.0% |
| !!! | AAAAATGTTTTTGTTTTTGT+TGG | + | chr2_2:6449317-6449336 | Msa0233990:intron | 15.0% |
| !!! | TTGATTTTAAGTTTGAAAAT+GGG | + | chr2_2:6449340-6449359 | Msa0233990:intron | 15.0% |
| !! | TTTGATTAAGAAAATGAAAA+AGG | + | chr2_2:6449468-6449487 | Msa0233990:intron | 15.0% |
| !!! | ACATATTTGAAGTATTTTTA+AGG | + | chr2_2:6450132-6450151 | Msa0233990:intron | 15.0% |
| !!! | AAAAATAACTAGAAAAGTTT+TGG | + | chr2_2:6450609-6450628 | Msa0233990:intron | 15.0% |
| !!! | ATTTTTTTGTGAAAAATGAT+TGG | + | chr2_2:6452048-6452067 | Msa0233990:intron | 15.0% |
| !!! | CAATTTTTAGAATTTTAAAC+AGG | + | chr2_2:6452492-6452511 | Msa0233990:intron | 15.0% |
| !!! | AGAATTGAATTAGTATTTTT+AGG | + | chr2_2:6452955-6452974 | Msa0233990:intron | 15.0% |
| !! | TATATAAACTAACAATCTAA+CGG | + | chr2_2:6453111-6453130 | Msa0233990:intron | 15.0% |
| !! | TTATATTAAGATTCAAACAT+TGG | - | chr2_2:6453244-6453263 | None:intergenic | 15.0% |
| !! | AATCTTAATATAACAAGTTA+TGG | + | chr2_2:6453251-6453270 | Msa0233990:intron | 15.0% |
| !! | AATTGTTTGTCTAATATAAT+TGG | - | chr2_2:6453693-6453712 | None:intergenic | 15.0% |
| !!! | GTCTAAAATATAACAAAAAT+TGG | + | chr2_2:6453898-6453917 | Msa0233990:intron | 15.0% |
| !! | AATGCATTATCTAGTAAATA+TGG | - | chr2_2:6447619-6447638 | None:intergenic | 20.0% |
| !!! | AATTCATTTATTGATTTCAG+AGG | + | chr2_2:6448037-6448056 | Msa0233990:intron | 20.0% |
| !! | GGAAAGAAAAAAAAATATCA+AGG | - | chr2_2:6448822-6448841 | None:intergenic | 20.0% |
| !! | TTATTAAATGAAGAATTGGA+GGG | + | chr2_2:6449193-6449212 | Msa0233990:intron | 20.0% |
| !!! | GTTGATTTTAAGTTTGAAAA+TGG | + | chr2_2:6449339-6449358 | Msa0233990:intron | 20.0% |
| !! | AATGAAAAAGGAAAATTCAA+TGG | + | chr2_2:6449480-6449499 | Msa0233990:intron | 20.0% |
| !! | ATGAAAAAGGAAAATTCAAT+GGG | + | chr2_2:6449481-6449500 | Msa0233990:intron | 20.0% |
| !!! | CATTTTTCATAATAAACCTT+GGG | - | chr2_2:6449515-6449534 | None:intergenic | 20.0% |
| !!! | ACATTTTTCATAATAAACCT+TGG | - | chr2_2:6449516-6449535 | None:intergenic | 20.0% |
| !!! | TGATGTTTGTTCATATTTTT+TGG | + | chr2_2:6449541-6449560 | Msa0233990:intron | 20.0% |
| !! | GAAATATTGCATAAAAGAAA+TGG | + | chr2_2:6449910-6449929 | Msa0233990:intron | 20.0% |
| !!! | TTTTTATAAGCACTTGAAAT+GGG | + | chr2_2:6449997-6450016 | Msa0233990:intron | 20.0% |
| !! | TTCTAAATGAATGTTATGAT+GGG | - | chr2_2:6450191-6450210 | None:intergenic | 20.0% |
| !! | ATTCTAAATGAATGTTATGA+TGG | - | chr2_2:6450192-6450211 | None:intergenic | 20.0% |
| !! | AAAGATAGAACAAATTTACA+AGG | + | chr2_2:6450251-6450270 | Msa0233990:intron | 20.0% |
| !! | TTTACATGTTAGAATTGTTT+AGG | - | chr2_2:6450560-6450579 | None:intergenic | 20.0% |
| !!! | TTTTGAAATGGATTTTTAAC+AGG | + | chr2_2:6452423-6452442 | Msa0233990:intron | 20.0% |
| !!! | CTTCAAATGCAATTTTAAAA+TGG | + | chr2_2:6452571-6452590 | Msa0233990:intron | 20.0% |
| !!! | ACTGAAAGAAATTTTAACAT+GGG | + | chr2_2:6452662-6452681 | Msa0233990:intron | 20.0% |
| !!! | ATTGTTTGAGTCTTTTAAAT+TGG | - | chr2_2:6452793-6452812 | None:intergenic | 20.0% |
| !!! | TATTTTTAGGTCCAAAATTA+GGG | + | chr2_2:6452968-6452987 | Msa0233990:intron | 20.0% |
| !! | AGTTATTGTAAAGATGAAAA+TGG | + | chr2_2:6453335-6453354 | Msa0233990:CDS | 20.0% |
| !! | AACAATTACACGATATATAT+TGG | + | chr2_2:6453706-6453725 | Msa0233990:intron | 20.0% |
| !! | ATATAACAAAAATTGGCATT+TGG | + | chr2_2:6453905-6453924 | Msa0233990:intron | 20.0% |
| !!! | ATTATCGATGTTATCTATTT+TGG | - | chr2_2:6454108-6454127 | None:intergenic | 20.0% |
| !! | ATAACATCGATAATTTATGT+TGG | + | chr2_2:6454114-6454133 | Msa0233990:three_prime_UTR | 20.0% |
| ! | AGTTAGATTATTATCAGTGA+TGG | + | chr2_2:6447695-6447714 | Msa0233990:exon | 25.0% |
| ! | AGAAAAAAAAAATGCAGAGA+GGG | - | chr2_2:6447855-6447874 | None:intergenic | 25.0% |
| ! | AAGAAAAAAAAAATGCAGAG+AGG | - | chr2_2:6447856-6447875 | None:intergenic | 25.0% |
| ! | AAATTGAAAAAAATGGATGG+TGG | - | chr2_2:6447885-6447904 | None:intergenic | 25.0% |
| !! | TCTATAAACCAGATGATTTT+TGG | + | chr2_2:6448132-6448151 | Msa0233990:CDS | 25.0% |
| !! | ATTACTCTTTTCTTTCCTTT+TGG | + | chr2_2:6448246-6448265 | Msa0233990:intron | 25.0% |
| !! | ATTTCAAGTACATAACCAAA+AGG | - | chr2_2:6448264-6448283 | None:intergenic | 25.0% |
| !! | TATATCAGCTCTTTTGAATT+AGG | - | chr2_2:6448443-6448462 | None:intergenic | 25.0% |
| ! | TATATCAATATTACACCACT+TGG | + | chr2_2:6448787-6448806 | Msa0233990:intron | 25.0% |
| !! | TATTGAGACATGTTTTATCT+TGG | + | chr2_2:6448931-6448950 | Msa0233990:intron | 25.0% |
| !!! | ACATGTTTTATCTTGGTTTT+CGG | + | chr2_2:6448938-6448957 | Msa0233990:intron | 25.0% |
| ! | AAGAAAAAATGAGATATCAC+CGG | - | chr2_2:6448998-6449017 | None:intergenic | 25.0% |
| !!! | GTGATATCTCATTTTTTCTT+GGG | + | chr2_2:6448998-6449017 | Msa0233990:intron | 25.0% |
| ! | GTTATTAAATGAAGAATTGG+AGG | + | chr2_2:6449192-6449211 | Msa0233990:intron | 25.0% |
| ! | AATTAGTCATTTGCAAAATG+TGG | + | chr2_2:6449418-6449437 | Msa0233990:intron | 25.0% |
| ! | GTATGTTTAGATGTATGTTT+AGG | - | chr2_2:6449593-6449612 | None:intergenic | 25.0% |
| ! | AGTAAAATACAAGAATTCCT+AGG | + | chr2_2:6449772-6449791 | Msa0233990:intron | 25.0% |
| !! | TTGCATATTAATTTTCACCA+AGG | - | chr2_2:6449813-6449832 | None:intergenic | 25.0% |
| ! | AACAAAAATGCATGAAATGA+TGG | + | chr2_2:6449888-6449907 | Msa0233990:intron | 25.0% |
| ! | TATTGCATAAAAGAAATGGT+AGG | + | chr2_2:6449914-6449933 | Msa0233990:intron | 25.0% |
| !!! | TACAATCACATAGAGTTTTT+TGG | + | chr2_2:6449970-6449989 | Msa0233990:intron | 25.0% |
| !! | GTTTTTATAAGCACTTGAAA+TGG | + | chr2_2:6449996-6450015 | Msa0233990:intron | 25.0% |
| !!! | AAGAAAAGTATCAAAGCATA+GGG | + | chr2_2:6450156-6450175 | Msa0233990:intron | 25.0% |
| !! | TCTATCTTTTACTTGTGATT+TGG | - | chr2_2:6450240-6450259 | None:intergenic | 25.0% |
| ! | AAAAAACGCTCCAAAAAAAA+AGG | - | chr2_2:6450284-6450303 | None:intergenic | 25.0% |
| !!! | TTTTTTGGAGCGTTTTTTAT+AGG | + | chr2_2:6450286-6450305 | Msa0233990:intron | 25.0% |
| !!! | ATTGTCTCTTGATCATTTTT+AGG | - | chr2_2:6450433-6450452 | None:intergenic | 25.0% |
| ! | AATGAAGAGTAATGAAGAAA+CGG | + | chr2_2:6450953-6450972 | Msa0233990:intron | 25.0% |
| !! | TATGAACGATGATGAAATTT+TGG | + | chr2_2:6451703-6451722 | Msa0233990:intron | 25.0% |
| !! | TTTGAGATGAAATTTAGTAG+TGG | + | chr2_2:6451917-6451936 | Msa0233990:intron | 25.0% |
| !! | ATGCAAATAACAAAAGTACA+AGG | + | chr2_2:6452230-6452249 | Msa0233990:intron | 25.0% |
| !!! | GACTGAAAGAAATTTTAACA+TGG | + | chr2_2:6452661-6452680 | Msa0233990:intron | 25.0% |
| !!! | GTATTTTTAGGTCCAAAATT+AGG | + | chr2_2:6452967-6452986 | Msa0233990:intron | 25.0% |
| !! | CTCAATAACTTTCTTTTTGA+AGG | - | chr2_2:6453011-6453030 | None:intergenic | 25.0% |
| !!! | TTAATTTGTAATCACAGAGA+CGG | - | chr2_2:6453192-6453211 | None:intergenic | 25.0% |
| !! | TAAAGATGAAAATGGATTTG+AGG | + | chr2_2:6453343-6453362 | Msa0233990:CDS | 25.0% |
| ! | AAGTTCTTAGAAGATATATG+TGG | + | chr2_2:6453482-6453501 | Msa0233990:CDS | 25.0% |
| ! | TTGGATAAACAAATGTGATT+AGG | + | chr2_2:6453773-6453792 | Msa0233990:intron | 25.0% |
| TGTTTATTCACTATTGTGTG+TGG | + | chr2_2:6447638-6447657 | Msa0233990:five_prime_UTR | 30.0% | |
| ATATGTTAGATCATTGTGAG+TGG | + | chr2_2:6447669-6447688 | Msa0233990:five_prime_UTR | 30.0% | |
| ! | GATTATTATCAGTGATGGAA+AGG | + | chr2_2:6447700-6447719 | Msa0233990:exon | 30.0% |
| GAATCAGTTTGATGTAGATA+GGG | - | chr2_2:6448200-6448219 | None:intergenic | 30.0% | |
| AGAATCAGTTTGATGTAGAT+AGG | - | chr2_2:6448201-6448220 | None:intergenic | 30.0% | |
| AGCACTCACAACAATAAAAT+TGG | - | chr2_2:6448293-6448312 | None:intergenic | 30.0% | |
| TTCAAAAGAGCTGATATATG+TGG | + | chr2_2:6448445-6448464 | Msa0233990:intron | 30.0% | |
| TCGTTGATATAAGTGAATGT+TGG | + | chr2_2:6448511-6448530 | Msa0233990:intron | 30.0% | |
| TGATATAAGTGAATGTTGGT+AGG | + | chr2_2:6448515-6448534 | Msa0233990:intron | 30.0% | |
| TCCTTTCCATAAGGTAATTA+GGG | + | chr2_2:6448742-6448761 | Msa0233990:intron | 30.0% | |
| TAACAATTCAACGACCAAAT+TGG | - | chr2_2:6448843-6448862 | None:intergenic | 30.0% | |
| !! | CATGTTTTATCTTGGTTTTC+GGG | + | chr2_2:6448939-6448958 | Msa0233990:intron | 30.0% |
| ! | TACGTTTGAACCTTTTTAAC+CGG | + | chr2_2:6448976-6448995 | Msa0233990:intron | 30.0% |
| !!! | GGTGATATCTCATTTTTTCT+TGG | + | chr2_2:6448997-6449016 | Msa0233990:intron | 30.0% |
| !!! | TATCTCATTTTTTCTTGGGA+AGG | + | chr2_2:6449002-6449021 | Msa0233990:intron | 30.0% |
| !!! | ATCTCATTTTTTCTTGGGAA+GGG | + | chr2_2:6449003-6449022 | Msa0233990:intron | 30.0% |
| TAGGATACTATAGTCGTTAT+GGG | - | chr2_2:6449097-6449116 | None:intergenic | 30.0% | |
| ATAGGATACTATAGTCGTTA+TGG | - | chr2_2:6449098-6449117 | None:intergenic | 30.0% | |
| TAACGACTATAGTATCCTAT+AGG | + | chr2_2:6449098-6449117 | Msa0233990:intron | 30.0% | |
| AAATTAAAGACGGTTCCTAT+AGG | - | chr2_2:6449116-6449135 | None:intergenic | 30.0% | |
| !! | ACATTTTTGGAAGAGAACTA+CGG | - | chr2_2:6449305-6449324 | None:intergenic | 30.0% |
| !! | GGATTTTGAAGAATAGAAAG+AGG | + | chr2_2:6449361-6449380 | Msa0233990:intron | 30.0% |
| GCATGTTTAGATGTATGTTT+AGG | - | chr2_2:6449619-6449638 | None:intergenic | 30.0% | |
| CAATGATGTAATAAGGACAA+TGG | - | chr2_2:6449706-6449725 | None:intergenic | 30.0% | |
| CATTGTCCTTATTACATCAT+TGG | + | chr2_2:6449704-6449723 | Msa0233990:intron | 30.0% | |
| CAAGATCATAGAATGTATCT+AGG | - | chr2_2:6449730-6449749 | None:intergenic | 30.0% | |
| GGATTAGAATGTAAAAACCT+AGG | - | chr2_2:6449792-6449811 | None:intergenic | 30.0% | |
| ! | GGTTTTTACATTCTAATCCT+TGG | + | chr2_2:6449793-6449812 | Msa0233990:intron | 30.0% |
| TTAATATGCAAGAAATTGCG+AGG | + | chr2_2:6449822-6449841 | Msa0233990:intron | 30.0% | |
| ATAAAGCTAAAGACACAAGA+AGG | + | chr2_2:6449848-6449867 | Msa0233990:intron | 30.0% | |
| ATATGGCATTTCATACATCT+TGG | + | chr2_2:6450061-6450080 | Msa0233990:intron | 30.0% | |
| ! | AATTTTCTTGACCTATGACT+CGG | - | chr2_2:6450102-6450121 | None:intergenic | 30.0% |
| !! | CAAGAAAAGTATCAAAGCAT+AGG | + | chr2_2:6450155-6450174 | Msa0233990:intron | 30.0% |
| !!! | AGGCAAGAAACCTTTTTTTT+TGG | + | chr2_2:6450271-6450290 | Msa0233990:intron | 30.0% |
| ATGATCAAGAGACAATCAAA+AGG | + | chr2_2:6450437-6450456 | Msa0233990:intron | 30.0% | |
| TTAAGCAAATTAAGGCAAAC+AGG | + | chr2_2:6450640-6450659 | Msa0233990:intron | 30.0% | |
| TAAGCAAATTAAGGCAAACA+GGG | + | chr2_2:6450641-6450660 | Msa0233990:intron | 30.0% | |
| CAGATAGCAAAAATATAGCA+AGG | + | chr2_2:6450688-6450707 | Msa0233990:intron | 30.0% | |
| ATGAAGAGTAATGAAGAAAC+GGG | + | chr2_2:6450954-6450973 | Msa0233990:intron | 30.0% | |
| TAGAGATGAATCCATTTGAT+GGG | - | chr2_2:6451115-6451134 | None:intergenic | 30.0% | |
| GTTGGGATTATTTGTTTGAT+TGG | + | chr2_2:6451262-6451281 | Msa0233990:intron | 30.0% | |
| !! | ACGATGATGAAATTTTGGAA+TGG | + | chr2_2:6451708-6451727 | Msa0233990:intron | 30.0% |
| TTCAATTCAGATTGCAGAAT+CGG | + | chr2_2:6451759-6451778 | Msa0233990:intron | 30.0% | |
| TTAAAGGTTGAAGATGAAGA+TGG | + | chr2_2:6451816-6451835 | Msa0233990:intron | 30.0% | |
| TGAAATTTAGTAGTGGTTGA+AGG | + | chr2_2:6451924-6451943 | Msa0233990:intron | 30.0% | |
| ! | TGACCAACTTTGACTTATAT+AGG | + | chr2_2:6452083-6452102 | Msa0233990:intron | 30.0% |
| TCACCTATATAAGTCAAAGT+TGG | - | chr2_2:6452089-6452108 | None:intergenic | 30.0% | |
| ! | TTTGACTTATATAGGTGATG+TGG | + | chr2_2:6452091-6452110 | Msa0233990:intron | 30.0% |
| GGACTCTAACAAACTAAAAA+AGG | + | chr2_2:6452201-6452220 | Msa0233990:intron | 30.0% | |
| !! | ACTCAGATGCAATTTTGAAA+TGG | + | chr2_2:6452411-6452430 | Msa0233990:intron | 30.0% |
| TTTGACATGAGATTGAAACA+AGG | + | chr2_2:6452756-6452775 | Msa0233990:intron | 30.0% | |
| ! | GATTAAAATGAGTTGAATGC+AGG | + | chr2_2:6452820-6452839 | Msa0233990:intron | 30.0% |
| TTTGCAAAATTCACATGCAA+GGG | - | chr2_2:6452860-6452879 | None:intergenic | 30.0% | |
| !! | GTCTTGTTATACCCTAATTT+TGG | - | chr2_2:6452982-6453001 | None:intergenic | 30.0% |
| GAACTTCAAAGATTGGTATA+AGG | - | chr2_2:6453468-6453487 | None:intergenic | 30.0% | |
| ! | CTTCTAAGAACTTCAAAGAT+TGG | - | chr2_2:6453475-6453494 | None:intergenic | 30.0% |
| GTATCCAGAATTCAATTTGA+AGG | + | chr2_2:6453643-6453662 | Msa0233990:CDS | 30.0% | |
| TTCTCCTTCAAATTGAATTC+TGG | - | chr2_2:6453650-6453669 | None:intergenic | 30.0% | |
| ! | TATATTGGTCTGAGTTAAAC+TGG | + | chr2_2:6453721-6453740 | Msa0233990:intron | 30.0% |
| TTGTCTGATCACATATAGTA+AGG | - | chr2_2:6453807-6453826 | None:intergenic | 30.0% | |
| CTTATGACTAATTTCCGTTA+AGG | - | chr2_2:6453833-6453852 | None:intergenic | 30.0% | |
| AAAAATTGGCATTTGGTTGT+AGG | + | chr2_2:6453912-6453931 | Msa0233990:intron | 30.0% | |
| TCAACAAAGCTCATAGATAA+TGG | + | chr2_2:6453971-6453990 | Msa0233990:CDS | 30.0% | |
| TGATATAATACTAAGATCGC+CGG | - | chr2_2:6454059-6454078 | None:intergenic | 30.0% | |
| TGAGAAACTAGAAAGTGATT+GGG | - | chr2_2:6454213-6454232 | None:intergenic | 30.0% | |
| ATGAGAAACTAGAAAGTGAT+TGG | - | chr2_2:6454214-6454233 | None:intergenic | 30.0% | |
| TTTCCAAAAGCTTCTTGACT+AGG | - | chr2_2:6447773-6447792 | None:intergenic | 35.0% | |
| !! | AGTCAAGAAGCTTTTGGAAA+AGG | + | chr2_2:6447773-6447792 | Msa0233990:CDS | 35.0% |
| !! | GTCAAGAAGCTTTTGGAAAA+GGG | + | chr2_2:6447774-6447793 | Msa0233990:CDS | 35.0% |
| ! | AATACTCAAGTTTCTGAGAG+TGG | - | chr2_2:6447814-6447833 | None:intergenic | 35.0% |
| AAAAAATGCAGAGAGGGAAA+GGG | - | chr2_2:6447849-6447868 | None:intergenic | 35.0% | |
| AAAAAAATGCAGAGAGGGAA+AGG | - | chr2_2:6447850-6447869 | None:intergenic | 35.0% | |
| TCCACATGCAAATACAAGAT+TGG | + | chr2_2:6448091-6448110 | Msa0233990:CDS | 35.0% | |
| ACCAATCTTGTATTTGCATG+TGG | - | chr2_2:6448095-6448114 | None:intergenic | 35.0% | |
| ! | TCTACATCAAACTGATTCTC+AGG | + | chr2_2:6448202-6448221 | Msa0233990:CDS | 35.0% |
| GCTTCATTGATGAAACTTGT+TGG | + | chr2_2:6448687-6448706 | Msa0233990:intron | 35.0% | |
| CTCCTTTCCATAAGGTAATT+AGG | + | chr2_2:6448741-6448760 | Msa0233990:intron | 35.0% | |
| TCCCTAATTACCTTATGGAA+AGG | - | chr2_2:6448746-6448765 | None:intergenic | 35.0% | |
| TCAAGGAAAACAATACCAAG+TGG | - | chr2_2:6448805-6448824 | None:intergenic | 35.0% | |
| ! | TGAGATATCACCGGTTAAAA+AGG | - | chr2_2:6448989-6449008 | None:intergenic | 35.0% |
| GGCATGAGATTGTAAAAAGT+GGG | + | chr2_2:6449391-6449410 | Msa0233990:intron | 35.0% | |
| GCATGAGATTGTAAAAAGTG+GGG | + | chr2_2:6449392-6449411 | Msa0233990:intron | 35.0% | |
| TGCAAAATGTGGTCTAAGTA+TGG | + | chr2_2:6449429-6449448 | Msa0233990:intron | 35.0% | |
| ! | CATGCATATTCTAGCTATAG+TGG | + | chr2_2:6449634-6449653 | Msa0233990:intron | 35.0% |
| TCTAGGCCAATGATGTAATA+AGG | - | chr2_2:6449713-6449732 | None:intergenic | 35.0% | |
| AAAGACACAAGAAGGAAACA+AGG | + | chr2_2:6449856-6449875 | Msa0233990:intron | 35.0% | |
| AAGACACAAGAAGGAAACAA+GGG | + | chr2_2:6449857-6449876 | Msa0233990:intron | 35.0% | |
| ! | TGGGAAAAAGCATAGAAACA+TGG | + | chr2_2:6450016-6450035 | Msa0233990:intron | 35.0% |
| AGAAACATGGAACATACAAG+AGG | + | chr2_2:6450029-6450048 | Msa0233990:intron | 35.0% | |
| ACAAGAGGCAAATTCACATA+TGG | + | chr2_2:6450044-6450063 | Msa0233990:intron | 35.0% | |
| TATCAAAGCATAGGGTAGAA+AGG | + | chr2_2:6450164-6450183 | Msa0233990:intron | 35.0% | |
| AAGCAAATTAAGGCAAACAG+GGG | + | chr2_2:6450642-6450661 | Msa0233990:intron | 35.0% | |
| ! | GATTCACGTTTCCTGATTTT+GGG | - | chr2_2:6450733-6450752 | None:intergenic | 35.0% |
| ! | TGATTCACGTTTCCTGATTT+TGG | - | chr2_2:6450734-6450753 | None:intergenic | 35.0% |
| !! | CATTTTTCAACTGAGCATCA+AGG | - | chr2_2:6450922-6450941 | None:intergenic | 35.0% |
| ATCAGTTCTTGAATTCTCGT+TGG | - | chr2_2:6451026-6451045 | None:intergenic | 35.0% | |
| ! | TTACGGTTTTCAACCAGTTA+CGG | - | chr2_2:6451073-6451092 | None:intergenic | 35.0% |
| CTAGAGATGAATCCATTTGA+TGG | - | chr2_2:6451116-6451135 | None:intergenic | 35.0% | |
| ! | AATGGATTCATCTCTAGCAT+TGG | + | chr2_2:6451119-6451138 | Msa0233990:intron | 35.0% |
| ACGTTCATCTTCAACTAATC+CGG | + | chr2_2:6451197-6451216 | Msa0233990:intron | 35.0% | |
| ! | ATTGGCTCATTGTTAAAGAC+AGG | + | chr2_2:6451280-6451299 | Msa0233990:intron | 35.0% |
| !! | AGTTTCGAGTTCTTCAGTTT+GGG | + | chr2_2:6451335-6451354 | Msa0233990:intron | 35.0% |
| !! | AAGAAGGTGCCATTATTGAA+CGG | + | chr2_2:6451565-6451584 | Msa0233990:intron | 35.0% |
| !!! | TGAAATTTTGGAATGGTGTG+AGG | + | chr2_2:6451715-6451734 | Msa0233990:intron | 35.0% |
| !! | GAGGTTGATGATGAATATAG+TGG | + | chr2_2:6451734-6451753 | Msa0233990:intron | 35.0% |
| AAGATGAAGATGGAAGTTGA+AGG | + | chr2_2:6451826-6451845 | Msa0233990:intron | 35.0% | |
| GGACTTGTAACAAACTCTTA+AGG | + | chr2_2:6452150-6452169 | Msa0233990:intron | 35.0% | |
| TCTTAAGGACCAATAGCATT+TGG | + | chr2_2:6452165-6452184 | Msa0233990:intron | 35.0% | |
| AAAAGACTAAAATGCCCCTA+GGG | + | chr2_2:6452528-6452547 | Msa0233990:intron | 35.0% | |
| AAATGACTAAAATGCCCCTA+GGG | + | chr2_2:6452685-6452704 | Msa0233990:intron | 35.0% | |
| GTTTGCAAAATTCACATGCA+AGG | - | chr2_2:6452861-6452880 | None:intergenic | 35.0% | |
| AATGCAGAGAAAGATGCAAT+TGG | + | chr2_2:6452894-6452913 | Msa0233990:intron | 35.0% | |
| CATAAACCCTTGATCATGAT+GGG | + | chr2_2:6453064-6453083 | Msa0233990:intron | 35.0% | |
| TTCTCTTTCTGCTAATGTCT+TGG | - | chr2_2:6453306-6453325 | None:intergenic | 35.0% | |
| ACATCATCAATGTGGACAAT+TGG | - | chr2_2:6453515-6453534 | None:intergenic | 35.0% | |
| CTTCACAAACATCATCAATG+TGG | - | chr2_2:6453523-6453542 | None:intergenic | 35.0% | |
| AAGAATCTGCCATTGATAGA+TGG | - | chr2_2:6453569-6453588 | None:intergenic | 35.0% | |
| ATCTATCAATGGCAGATTCT+TGG | + | chr2_2:6453568-6453587 | Msa0233990:CDS | 35.0% | |
| TGATCAGACAAGTTCCTTAA+CGG | + | chr2_2:6453816-6453835 | Msa0233990:intron | 35.0% | |
| TTTGGTTGTAGGTATTTGGA+AGG | + | chr2_2:6453923-6453942 | Msa0233990:intron | 35.0% | |
| TTGGTTGTAGGTATTTGGAA+GGG | + | chr2_2:6453924-6453943 | Msa0233990:intron | 35.0% | |
| GAGAAACTAGAAAGTGATTG+GGG | - | chr2_2:6454212-6454231 | None:intergenic | 35.0% | |
| ! | TCTCCTAGTCAAGAAGCTTT+TGG | + | chr2_2:6447767-6447786 | Msa0233990:CDS | 40.0% |
| GCACTGCATATAACAACTGT+TGG | - | chr2_2:6447987-6448006 | None:intergenic | 40.0% | |
| ATTGCAGGCCAAAAATCATC+TGG | - | chr2_2:6448143-6448162 | None:intergenic | 40.0% | |
| !!! | GATTTTTGGCCTGCAATTCA+AGG | + | chr2_2:6448146-6448165 | Msa0233990:CDS | 40.0% |
| AATTCACAGCCTTGAATTGC+AGG | - | chr2_2:6448158-6448177 | None:intergenic | 40.0% | |
| AGTTTGATGTAGATAGGGAG+TGG | - | chr2_2:6448195-6448214 | None:intergenic | 40.0% | |
| AAGAGCTGATATATGTGGTC+AGG | + | chr2_2:6448450-6448469 | Msa0233990:intron | 40.0% | |
| ! | AGGACAGTTTAAGAGCATAG+AGG | + | chr2_2:6448535-6448554 | Msa0233990:intron | 40.0% |
| GTGAGAAGACTGATATACAC+TGG | + | chr2_2:6448614-6448633 | Msa0233990:CDS | 40.0% | |
| TCCATAAGGTAATTAGGGAG+AGG | + | chr2_2:6448747-6448766 | Msa0233990:intron | 40.0% | |
| TCCTCTCCCTAATTACCTTA+TGG | - | chr2_2:6448751-6448770 | None:intergenic | 40.0% | |
| ! | TGGAGGGAGAAGAATGTTTT+TGG | + | chr2_2:6449209-6449228 | Msa0233990:intron | 40.0% |
| GTGGATTTGATCCCTTAAAC+GGG | - | chr2_2:6449283-6449302 | None:intergenic | 40.0% | |
| ! | GGTGGATTTGATCCCTTAAA+CGG | - | chr2_2:6449284-6449303 | None:intergenic | 40.0% |
| !! | TTTTTGGAAGAGAACTACGG+TGG | - | chr2_2:6449302-6449321 | None:intergenic | 40.0% |
| AAGAATAGAAAGAGGCCTCA+AGG | + | chr2_2:6449369-6449388 | Msa0233990:intron | 40.0% | |
| AGAATAGAAAGAGGCCTCAA+GGG | + | chr2_2:6449370-6449389 | Msa0233990:intron | 40.0% | |
| TTTACAATCTCATGCCCTTG+AGG | - | chr2_2:6449387-6449406 | None:intergenic | 40.0% | |
| GGGCATGAGATTGTAAAAAG+TGG | + | chr2_2:6449390-6449409 | Msa0233990:intron | 40.0% | |
| !! | TCAATGGGATTTTGATCCCA+AGG | + | chr2_2:6449496-6449515 | Msa0233990:intron | 40.0% |
| AGACACAAGAAGGAAACAAG+GGG | + | chr2_2:6449858-6449877 | Msa0233990:intron | 40.0% | |
| AAGAATTTCAGCCGAGTCAT+AGG | + | chr2_2:6450088-6450107 | Msa0233990:intron | 40.0% | |
| AAAAGCTGAGAGAAGCAACA+AGG | - | chr2_2:6450765-6450784 | None:intergenic | 40.0% | |
| ! | TGTTCCTTTTCTTTCTCCAC+TGG | + | chr2_2:6450784-6450803 | Msa0233990:intron | 40.0% |
| CAAACCAGTGGAGAATGAAA+AGG | - | chr2_2:6450816-6450835 | None:intergenic | 40.0% | |
| !! | TTTCATTCTCCACTGGTTTG+CGG | + | chr2_2:6450816-6450835 | Msa0233990:intron | 40.0% |
| GATGCTTGTGAATTGAAAGG+GGG | - | chr2_2:6450844-6450863 | None:intergenic | 40.0% | |
| CGATGCTTGTGAATTGAAAG+GGG | - | chr2_2:6450845-6450864 | None:intergenic | 40.0% | |
| GCGATGCTTGTGAATTGAAA+GGG | - | chr2_2:6450846-6450865 | None:intergenic | 40.0% | |
| TGCGATGCTTGTGAATTGAA+AGG | - | chr2_2:6450847-6450866 | None:intergenic | 40.0% | |
| CATCAAGGATTGAACAAGTG+AGG | - | chr2_2:6450907-6450926 | None:intergenic | 40.0% | |
| GTTGGTTGCTGCAAACAAAT+GGG | - | chr2_2:6451008-6451027 | None:intergenic | 40.0% | |
| GAACTGATCCATATAGTTCG+CGG | + | chr2_2:6451038-6451057 | Msa0233990:intron | 40.0% | |
| ! | CTGAAGGTGCAAGGTTATTA+CGG | - | chr2_2:6451090-6451109 | None:intergenic | 40.0% |
| TGCATACTGAGATTCACAGT+TGG | + | chr2_2:6451244-6451263 | Msa0233990:intron | 40.0% | |
| GCATACTGAGATTCACAGTT+GGG | + | chr2_2:6451245-6451264 | Msa0233990:intron | 40.0% | |
| CAAACTGAAGAACTCGAAAC+TGG | - | chr2_2:6451336-6451355 | None:intergenic | 40.0% | |
| !! | CAGTTTCGAGTTCTTCAGTT+TGG | + | chr2_2:6451334-6451353 | Msa0233990:intron | 40.0% |
| AAGCTTCTCCAATTCATCGA+CGG | + | chr2_2:6451377-6451396 | Msa0233990:intron | 40.0% | |
| TTCCATGGAAGTGATACGAT+TGG | + | chr2_2:6451476-6451495 | Msa0233990:intron | 40.0% | |
| TCCATGGAAGTGATACGATT+GGG | + | chr2_2:6451477-6451496 | Msa0233990:intron | 40.0% | |
| AATTCCCCTCCGTTCAATAA+TGG | - | chr2_2:6451577-6451596 | None:intergenic | 40.0% | |
| ATTATTGAACGGAGGGGAAT+TGG | + | chr2_2:6451576-6451595 | Msa0233990:intron | 40.0% | |
| AATTCAGATTGCAGAATCGG+TGG | + | chr2_2:6451762-6451781 | Msa0233990:intron | 40.0% | |
| !!! | TCGGTGGTTTTGTGAATTGT+TGG | + | chr2_2:6451778-6451797 | Msa0233990:intron | 40.0% |
| !!! | GTGGTTTTGTGAATTGTTGG+AGG | + | chr2_2:6451781-6451800 | Msa0233990:intron | 40.0% |
| TGTGAATTGTTGGAGGTTTG+TGG | + | chr2_2:6451788-6451807 | Msa0233990:intron | 40.0% | |
| GAAGATGGAAGTTGAAGGTT+TGG | + | chr2_2:6451831-6451850 | Msa0233990:intron | 40.0% | |
| ! | GGAAGTTGAAGGTTTGGTTA+TGG | + | chr2_2:6451837-6451856 | Msa0233990:intron | 40.0% |
| ! | AGTTGAAGGTTTGGTTATGG+AGG | + | chr2_2:6451840-6451859 | Msa0233990:intron | 40.0% |
| !! | GGTTTGGTTATGGAGGTTTT+TGG | + | chr2_2:6451847-6451866 | Msa0233990:intron | 40.0% |
| !! | TTGGTTATGGAGGTTTTTGG+TGG | + | chr2_2:6451850-6451869 | Msa0233990:intron | 40.0% |
| ATGAAGATTGGAGGTGGTTA+TGG | + | chr2_2:6451891-6451910 | Msa0233990:intron | 40.0% | |
| ! | GTGGTGGAAGAAGTTAGTTA+GGG | + | chr2_2:6451965-6451984 | Msa0233990:intron | 40.0% |
| TGGAAGGTTGTTAGAAGAGA+GGG | + | chr2_2:6451991-6452010 | Msa0233990:intron | 40.0% | |
| TATAGGTGATGTGGTAAGCT+TGG | + | chr2_2:6452100-6452119 | Msa0233990:intron | 40.0% | |
| TACACATGGCATTGTCTCAT+TGG | - | chr2_2:6452127-6452146 | None:intergenic | 40.0% | |
| GTTACAAGTCCAAGTACACA+TGG | - | chr2_2:6452141-6452160 | None:intergenic | 40.0% | |
| ACCAATAGCATTTGGACACA+TGG | + | chr2_2:6452173-6452192 | Msa0233990:intron | 40.0% | |
| AAATGACCAAAATGCCCCTA+GGG | + | chr2_2:6452368-6452387 | Msa0233990:intron | 40.0% | |
| !! | TTAGTCGTTTTAAGCCCCTA+GGG | - | chr2_2:6452386-6452405 | None:intergenic | 40.0% |
| !! | TTTAGTCGTTTTAAGCCCCT+AGG | - | chr2_2:6452387-6452406 | None:intergenic | 40.0% |
| GAAAAGACTAAAATGCCCCT+AGG | + | chr2_2:6452527-6452546 | Msa0233990:intron | 40.0% | |
| AAAGACTAAAATGCCCCTAG+GGG | + | chr2_2:6452529-6452548 | Msa0233990:intron | 40.0% | |
| GAAATGACTAAAATGCCCCT+AGG | + | chr2_2:6452684-6452703 | Msa0233990:intron | 40.0% | |
| AATGACTAAAATGCCCCTAG+GGG | + | chr2_2:6452686-6452705 | Msa0233990:intron | 40.0% | |
| TTTAGTCAGTTTAGCCCCTA+GGG | - | chr2_2:6452703-6452722 | None:intergenic | 40.0% | |
| ! | TTTTAGTCAGTTTAGCCCCT+AGG | - | chr2_2:6452704-6452723 | None:intergenic | 40.0% |
| GCATAAACCCTTGATCATGA+TGG | + | chr2_2:6453063-6453082 | Msa0233990:intron | 40.0% | |
| ! | TGGATTTGAGGTTGTAAGTC+TGG | + | chr2_2:6453355-6453374 | Msa0233990:CDS | 40.0% |
| ACACCTCTTAATCACATACC+CGG | + | chr2_2:6453401-6453420 | Msa0233990:CDS | 40.0% | |
| TTCATTGTCTTGTAGCTGAG+AGG | - | chr2_2:6453444-6453463 | None:intergenic | 40.0% | |
| AAGCTCAGCGCAAAAGATAT+GGG | - | chr2_2:6453546-6453565 | None:intergenic | 40.0% | |
| CTTAAGTGATGTCTCGAGTT+TGG | + | chr2_2:6453754-6453773 | Msa0233990:intron | 40.0% | |
| GGCATTTGGTTGTAGGTATT+TGG | + | chr2_2:6453919-6453938 | Msa0233990:intron | 40.0% | |
| ATAGTATCAGATGCGCAAGA+AGG | + | chr2_2:6454032-6454051 | Msa0233990:CDS | 40.0% | |
| !! | ACAGGTGGTGCTGGTTATAT+TGG | + | chr2_2:6447741-6447760 | Msa0233990:CDS | 45.0% |
| ! | TCAAGTTTCTGAGAGTGGCA+TGG | - | chr2_2:6447809-6447828 | None:intergenic | 45.0% |
| TCCAAAGTCAGCTTTCTGAG+AGG | + | chr2_2:6448065-6448084 | Msa0233990:CDS | 45.0% | |
| ATAGAGGAAGCAGCAATAGC+AGG | + | chr2_2:6448551-6448570 | Msa0233990:CDS | 45.0% | |
| CTTCTCCACTGAAGGATGAT+GGG | + | chr2_2:6448651-6448670 | Msa0233990:intron | 45.0% | |
| !! | GATGATGGGAGTGGTTACAA+AGG | + | chr2_2:6448665-6448684 | Msa0233990:intron | 45.0% |
| TATGGAAAGGAGTGAGAGGA+AGG | - | chr2_2:6448733-6448752 | None:intergenic | 45.0% | |
| TCCTCTCACTCCTTTCCATA+AGG | + | chr2_2:6448733-6448752 | Msa0233990:intron | 45.0% | |
| ACCTTATGGAAAGGAGTGAG+AGG | - | chr2_2:6448737-6448756 | None:intergenic | 45.0% | |
| GGAGAGGATGTCAGATTACA+AGG | + | chr2_2:6448763-6448782 | Msa0233990:intron | 45.0% | |
| AGCAAAACCCTTGAGAATCG+AGG | + | chr2_2:6449034-6449053 | Msa0233990:intron | 45.0% | |
| GCGCGCGTAGAAATTAAAGA+CGG | - | chr2_2:6449126-6449145 | None:intergenic | 45.0% | |
| TTGCCTACGTACCCGTTTAA+GGG | + | chr2_2:6449269-6449288 | Msa0233990:intron | 45.0% | |
| GACACAAGAAGGAAACAAGG+GGG | + | chr2_2:6449859-6449878 | Msa0233990:intron | 45.0% | |
| GAGAGAAGCAACAAGGAAGA+AGG | - | chr2_2:6450758-6450777 | None:intergenic | 45.0% | |
| AATGAAAAGGAACGCACCAG+TGG | - | chr2_2:6450803-6450822 | None:intergenic | 45.0% | |
| ! | CGTTCCTTTTCATTCTCCAC+TGG | + | chr2_2:6450809-6450828 | Msa0233990:intron | 45.0% |
| CACCATGTCGGATGATGAAA+GGG | - | chr2_2:6450884-6450903 | None:intergenic | 45.0% | |
| ! | CGTTGGTTGCTGCAAACAAA+TGG | - | chr2_2:6451009-6451028 | None:intergenic | 45.0% |
| GTATCTTGCCGCGAACTATA+TGG | - | chr2_2:6451049-6451068 | None:intergenic | 45.0% | |
| CGTAATAACCTTGCACCTTC+AGG | + | chr2_2:6451088-6451107 | Msa0233990:intron | 45.0% | |
| ! | ATCCATTTGATGGGTCCTGA+AGG | - | chr2_2:6451106-6451125 | None:intergenic | 45.0% |
| CTTCGCGAAACAATCTGATC+CGG | + | chr2_2:6451164-6451183 | Msa0233990:intron | 45.0% | |
| GATGAACGTAAGAACGACAC+CGG | - | chr2_2:6451186-6451205 | None:intergenic | 45.0% | |
| TCAGTTTGGGCAGAAGAAAG+AGG | + | chr2_2:6451348-6451367 | Msa0233990:intron | 45.0% | |
| AGCTTCTCCAATTCATCGAC+GGG | + | chr2_2:6451378-6451397 | Msa0233990:intron | 45.0% | |
| ! | GCTGTTGAGGGATTTTCCTT+GGG | + | chr2_2:6451443-6451462 | Msa0233990:intron | 45.0% |
| ATGGAAGAATCTCTCTCCCA+AGG | - | chr2_2:6451462-6451481 | None:intergenic | 45.0% | |
| TTGGGAGAGAGATTCTTCCA+TGG | + | chr2_2:6451461-6451480 | Msa0233990:intron | 45.0% | |
| TGATACGATTGGGCTTCTTG+CGG | + | chr2_2:6451487-6451506 | Msa0233990:intron | 45.0% | |
| !! | AAGGTGCCATTATTGAACGG+AGG | + | chr2_2:6451568-6451587 | Msa0233990:intron | 45.0% |
| !! | AGGTGCCATTATTGAACGGA+GGG | + | chr2_2:6451569-6451588 | Msa0233990:intron | 45.0% |
| AGGGGAATTGGTGAATCTGA+CGG | + | chr2_2:6451588-6451607 | Msa0233990:intron | 45.0% | |
| GAATTGTTGGAGGTTTGTGG+TGG | + | chr2_2:6451791-6451810 | Msa0233990:intron | 45.0% | |
| ! | GAGGTTTGTGGTGGAGTTAA+AGG | + | chr2_2:6451800-6451819 | Msa0233990:intron | 45.0% |
| !!! | GAGGTTTTTGGTGGTGAATG+TGG | + | chr2_2:6451859-6451878 | Msa0233990:intron | 45.0% |
| !!! | GTTTTTGGTGGTGAATGTGG+TGG | + | chr2_2:6451862-6451881 | Msa0233990:intron | 45.0% |
| TGGTGGTTAGGGATGAAGAT+TGG | + | chr2_2:6451879-6451898 | Msa0233990:intron | 45.0% | |
| TGGTTAGGGATGAAGATTGG+AGG | + | chr2_2:6451882-6451901 | Msa0233990:intron | 45.0% | |
| TTAGGGATGAAGATTGGAGG+TGG | + | chr2_2:6451885-6451904 | Msa0233990:intron | 45.0% | |
| AAGATTGGAGGTGGTTATGG+AGG | + | chr2_2:6451894-6451913 | Msa0233990:intron | 45.0% | |
| GTAGTGGTTGAAGGTTGTTG+TGG | + | chr2_2:6451933-6451952 | Msa0233990:intron | 45.0% | |
| AAGGTTGTTGTGGTGGTTGA+GGG | + | chr2_2:6451943-6451962 | Msa0233990:intron | 45.0% | |
| !! | GGTGGTGGAAGAAGTTAGTT+AGG | + | chr2_2:6451964-6451983 | Msa0233990:intron | 45.0% |
| GTGGAAGAAGTTAGTTAGGG+TGG | + | chr2_2:6451968-6451987 | Msa0233990:intron | 45.0% | |
| GAAGAAGTTAGTTAGGGTGG+TGG | + | chr2_2:6451971-6451990 | Msa0233990:intron | 45.0% | |
| !! | AAGTTAGTTAGGGTGGTGGA+AGG | + | chr2_2:6451975-6451994 | Msa0233990:intron | 45.0% |
| GTGGAAGGTTGTTAGAAGAG+AGG | + | chr2_2:6451990-6452009 | Msa0233990:intron | 45.0% | |
| GAGACAATGCCATGTGTACT+TGG | + | chr2_2:6452129-6452148 | Msa0233990:intron | 45.0% | |
| GCCATGTGTCCAAATGCTAT+TGG | - | chr2_2:6452177-6452196 | None:intergenic | 45.0% | |
| GAAATGACCAAAATGCCCCT+AGG | + | chr2_2:6452367-6452386 | Msa0233990:intron | 45.0% | |
| AATGACCAAAATGCCCCTAG+GGG | + | chr2_2:6452369-6452388 | Msa0233990:intron | 45.0% | |
| !! | TAGTCGTTTTAAGCCCCTAG+GGG | - | chr2_2:6452385-6452404 | None:intergenic | 45.0% |
| ! | TTGAGTCAGTTTTGCCCCTA+GGG | - | chr2_2:6452546-6452565 | None:intergenic | 45.0% |
| ! | TTTGAGTCAGTTTTGCCCCT+AGG | - | chr2_2:6452547-6452566 | None:intergenic | 45.0% |
| TTAGTCAGTTTAGCCCCTAG+GGG | - | chr2_2:6452702-6452721 | None:intergenic | 45.0% | |
| GTGAGACCCATCATGATCAA+GGG | - | chr2_2:6453073-6453092 | None:intergenic | 45.0% | |
| AGTGAGACCCATCATGATCA+AGG | - | chr2_2:6453074-6453093 | None:intergenic | 45.0% | |
| !! | GAGGTTGTAAGTCTGGTTCT+TGG | + | chr2_2:6453362-6453381 | Msa0233990:CDS | 45.0% |
| CTTCCGGGTATGTGATTAAG+AGG | - | chr2_2:6453407-6453426 | None:intergenic | 45.0% | |
| GAAGCTCAGCGCAAAAGATA+TGG | - | chr2_2:6453547-6453566 | None:intergenic | 45.0% | |
| GCTGAGCTTCCATCTATCAA+TGG | + | chr2_2:6453557-6453576 | Msa0233990:CDS | 45.0% | |
| GTATTTGGAAGGGCCAAACA+GGG | + | chr2_2:6453934-6453953 | Msa0233990:CDS | 45.0% | |
| GCCAAACAGGGCAATCAAAT+TGG | + | chr2_2:6453946-6453965 | Msa0233990:CDS | 45.0% | |
| GCCAATTTGATTGCCCTGTT+TGG | - | chr2_2:6453950-6453969 | None:intergenic | 45.0% | |
| ACTAGAAAGTGATTGGGGCA+AGG | - | chr2_2:6454207-6454226 | None:intergenic | 45.0% | |
| !! | ATATTTAATTAAAAAATGAA+CGG | - | chr2_2:6447957-6447976 | None:intergenic | 5.0% |
| ! | AGTGATGGAAAGGAGCTGCA+AGG | + | chr2_2:6447710-6447729 | Msa0233990:exon | 50.0% |
| AGCTGCAAGGTGTGTGTTAC+AGG | + | chr2_2:6447723-6447742 | Msa0233990:CDS | 50.0% | |
| TGCAAGGTGTGTGTTACAGG+TGG | + | chr2_2:6447726-6447745 | Msa0233990:CDS | 50.0% | |
| ! | GCCTCTCAGAAAGCTGACTT+TGG | - | chr2_2:6448069-6448088 | None:intergenic | 50.0% |
| GTAGATAGGGAGTGGCAACA+TGG | - | chr2_2:6448187-6448206 | None:intergenic | 50.0% | |
| ACTGATATACACTGGCACCG+TGG | + | chr2_2:6448622-6448641 | Msa0233990:CDS | 50.0% | |
| GCTTCTCCACTGAAGGATGA+TGG | + | chr2_2:6448650-6448669 | Msa0233990:intron | 50.0% | |
| AACCCTTGAGAATCGAGGTC+CGG | + | chr2_2:6449039-6449058 | Msa0233990:intron | 50.0% | |
| !! | TCCGGGAGTTGTTTTCGCTA+CGG | + | chr2_2:6449057-6449076 | Msa0233990:intron | 50.0% |
| !! | GAGTTGTTTTCGCTACGGGA+AGG | + | chr2_2:6449062-6449081 | Msa0233990:intron | 50.0% |
| !! | TTTCGCTACGGGAAGGTGTT+AGG | + | chr2_2:6449069-6449088 | Msa0233990:intron | 50.0% |
| CTTAAACGGGTACGTAGGCA+AGG | - | chr2_2:6449270-6449289 | None:intergenic | 50.0% | |
| CTTGCCTACGTACCCGTTTA+AGG | + | chr2_2:6449268-6449287 | Msa0233990:intron | 50.0% | |
| GATCCCTTAAACGGGTACGT+AGG | - | chr2_2:6449275-6449294 | None:intergenic | 50.0% | |
| AGTGGTGTGTGTGCATGTGT+CGG | + | chr2_2:6449652-6449671 | Msa0233990:intron | 50.0% | |
| !!! | TCTGCACACCACTTTTTGCC+AGG | - | chr2_2:6450672-6450691 | None:intergenic | 50.0% |
| AAGGAACAAGAACCAAGCCC+AGG | + | chr2_2:6450707-6450726 | Msa0233990:intron | 50.0% | |
| ! | CGTTTCCTGATTTTGGGCCT+GGG | - | chr2_2:6450727-6450746 | None:intergenic | 50.0% |
| ! | ACGTTTCCTGATTTTGGGCC+TGG | - | chr2_2:6450728-6450747 | None:intergenic | 50.0% |
| CGCACCAGTGGAGAAAGAAA+AGG | - | chr2_2:6450791-6450810 | None:intergenic | 50.0% | |
| GGATGATGAAAGGGAGGAGA+AGG | - | chr2_2:6450875-6450894 | None:intergenic | 50.0% | |
| CATGTCGGATGATGAAAGGG+AGG | - | chr2_2:6450881-6450900 | None:intergenic | 50.0% | |
| CTCCCTTTCATCATCCGACA+TGG | + | chr2_2:6450879-6450898 | Msa0233990:intron | 50.0% | |
| GCACCATGTCGGATGATGAA+AGG | - | chr2_2:6450885-6450904 | None:intergenic | 50.0% | |
| ! | GAACAAGTGAGGCACCATGT+CGG | - | chr2_2:6450896-6450915 | None:intergenic | 50.0% |
| CACCTTCAGGACCCATCAAA+TGG | + | chr2_2:6451101-6451120 | Msa0233990:intron | 50.0% | |
| GCATTGGAATCGAACGAGCT+AGG | + | chr2_2:6451135-6451154 | Msa0233990:intron | 50.0% | |
| TTCTTGCTGCTCGCTGTTGA+GGG | + | chr2_2:6451431-6451450 | Msa0233990:intron | 50.0% | |
| ! | CGCTGTTGAGGGATTTTCCT+TGG | + | chr2_2:6451442-6451461 | Msa0233990:intron | 50.0% |
| GCCCAATCGTATCACTTCCA+TGG | - | chr2_2:6451481-6451500 | None:intergenic | 50.0% | |
| GAGGTTCAAGACGTGTTCGT+CGG | + | chr2_2:6451533-6451552 | Msa0233990:intron | 50.0% | |
| TCGTCGGTGGTTGTTGAAGA+AGG | + | chr2_2:6451549-6451568 | Msa0233990:intron | 50.0% | |
| !! | GGTGCCATTATTGAACGGAG+GGG | + | chr2_2:6451570-6451589 | Msa0233990:intron | 50.0% |
| ! | TGGTGGTGAATGTGGTGGTT+AGG | + | chr2_2:6451867-6451886 | Msa0233990:intron | 50.0% |
| GGTGGTGAATGTGGTGGTTA+GGG | + | chr2_2:6451868-6451887 | Msa0233990:intron | 50.0% | |
| GTGGTTGAAGGTTGTTGTGG+TGG | + | chr2_2:6451936-6451955 | Msa0233990:intron | 50.0% | |
| GAAGGTTGTTGTGGTGGTTG+AGG | + | chr2_2:6451942-6451961 | Msa0233990:intron | 50.0% | |
| GCATTTGGACACATGGCACT+TGG | + | chr2_2:6452180-6452199 | Msa0233990:intron | 50.0% | |
| !!! | TTAAGCCCCTAGGGGCATTT+TGG | - | chr2_2:6452377-6452396 | None:intergenic | 50.0% |
| ! | TGAGTCAGTTTTGCCCCTAG+GGG | - | chr2_2:6452545-6452564 | None:intergenic | 50.0% |
| !! | AGTCTGGTTCTTGGCCTAGT+TGG | + | chr2_2:6453371-6453390 | Msa0233990:CDS | 50.0% |
| TGGTTCTTGGCCTAGTTGGA+GGG | + | chr2_2:6453375-6453394 | Msa0233990:CDS | 50.0% | |
| GTAACCACTGCAACACTTCC+GGG | - | chr2_2:6453422-6453441 | None:intergenic | 50.0% | |
| GGTAACCACTGCAACACTTC+CGG | - | chr2_2:6453423-6453442 | None:intergenic | 50.0% | |
| GGTATTTGGAAGGGCCAAAC+AGG | + | chr2_2:6453933-6453952 | Msa0233990:intron | 50.0% | |
| ATCAGATGCGCAAGAAGGAC+CGG | + | chr2_2:6454037-6454056 | Msa0233990:CDS | 50.0% | |
| !! | AGAGAGTGTCTCTTCCCTTG+CGG | + | chr2_2:6454181-6454200 | Msa0233990:three_prime_UTR | 50.0% |
| GTGTGTGTTACAGGTGGTGC+TGG | + | chr2_2:6447732-6447751 | Msa0233990:CDS | 55.0% | |
| CAGTGGAGAAGCAGCAACCA+CGG | - | chr2_2:6448642-6448661 | None:intergenic | 55.0% | |
| ! | GGTTGCTGCTTCTCCACTGA+AGG | + | chr2_2:6448643-6448662 | Msa0233990:intron | 55.0% |
| CCACTCCCATCATCCTTCAG+TGG | - | chr2_2:6448659-6448678 | None:intergenic | 55.0% | |
| !! | CCACTGAAGGATGATGGGAG+TGG | + | chr2_2:6448656-6448675 | Msa0233990:intron | 55.0% |
| TGAGAGGAAGGTGGAGACTC+TGG | - | chr2_2:6448721-6448740 | None:intergenic | 55.0% | |
| GGAAAGGAGTGAGAGGAAGG+TGG | - | chr2_2:6448730-6448749 | None:intergenic | 55.0% | |
| ACCCTTGAGAATCGAGGTCC+GGG | + | chr2_2:6449040-6449059 | Msa0233990:intron | 55.0% | |
| TCCCGGACCTCGATTCTCAA+GGG | - | chr2_2:6449044-6449063 | None:intergenic | 55.0% | |
| CCCGTAGCGAAAACAACTCC+CGG | - | chr2_2:6449061-6449080 | None:intergenic | 55.0% | |
| !! | CCGGGAGTTGTTTTCGCTAC+GGG | + | chr2_2:6449058-6449077 | Msa0233990:intron | 55.0% |
| ! | GCATGTGTCGGTGCTTGTGT+CGG | + | chr2_2:6449664-6449683 | Msa0233990:intron | 55.0% |
| AAGGCAAACAGGGGTCTACC+TGG | + | chr2_2:6450651-6450670 | Msa0233990:intron | 55.0% | |
| GGGGTCTACCTGGCAAAAAG+TGG | + | chr2_2:6450661-6450680 | Msa0233990:intron | 55.0% | |
| ! | TGATGGGTCCTGAAGGTGCA+AGG | - | chr2_2:6451099-6451118 | None:intergenic | 55.0% |
| GCAGCAGATGAGTTCATCGC+CGG | - | chr2_2:6451219-6451238 | None:intergenic | 55.0% | |
| TGTCGCTCCCGTCGATGAAT+TGG | - | chr2_2:6451388-6451407 | None:intergenic | 55.0% | |
| TTCATCGACGGGAGCGACAA+CGG | + | chr2_2:6451389-6451408 | Msa0233990:intron | 55.0% | |
| ! | CGACAACGGCGGATTTGGAA+CGG | + | chr2_2:6451403-6451422 | Msa0233990:intron | 55.0% |
| CTTCTTGCTGCTCGCTGTTG+AGG | + | chr2_2:6451430-6451449 | Msa0233990:intron | 55.0% | |
| GTTCAAGACGTGTTCGTCGG+TGG | + | chr2_2:6451536-6451555 | Msa0233990:intron | 55.0% | |
| GTTGTTGTGGTGGTTGAGGG+TGG | + | chr2_2:6451946-6451965 | Msa0233990:intron | 55.0% | |
| ! | CTGGTTCTTGGCCTAGTTGG+AGG | + | chr2_2:6453374-6453393 | Msa0233990:CDS | 55.0% |
| GGTTCTTGGCCTAGTTGGAG+GGG | + | chr2_2:6453376-6453395 | Msa0233990:CDS | 55.0% | |
| !! | CATACCCGGAAGTGTTGCAG+TGG | + | chr2_2:6453415-6453434 | Msa0233990:CDS | 55.0% |
| ! | GGAAGGTGGAGACTCTGGAG+AGG | - | chr2_2:6448716-6448735 | None:intergenic | 60.0% |
| CTCCCGGACCTCGATTCTCA+AGG | - | chr2_2:6449045-6449064 | None:intergenic | 60.0% | |
| ! | CCTGATTTTGGGCCTGGGCT+TGG | - | chr2_2:6450722-6450741 | None:intergenic | 60.0% |
| CCAAGCCCAGGCCCAAAATC+AGG | + | chr2_2:6450719-6450738 | Msa0233990:intron | 60.0% | |
| GCGGCAAGATACGCCGTAAC+TGG | + | chr2_2:6451057-6451076 | Msa0233990:intron | 60.0% | |
| ! | CAACGGCGGATTTGGAACGG+AGG | + | chr2_2:6451406-6451425 | Msa0233990:intron | 60.0% |
| TGGGCTTCTTGCGGAGTGCA+CGG | + | chr2_2:6451496-6451515 | Msa0233990:intron | 60.0% | |
| ! | CACGGAGGCGTGTGTTGATG+AGG | + | chr2_2:6451514-6451533 | Msa0233990:intron | 60.0% |
| TGTGTGCGGCGGTGGTGATT+GGG | + | chr2_2:6451620-6451639 | Msa0233990:intron | 60.0% | |
| GTTGTGGTGGTTGAGGGTGG+TGG | + | chr2_2:6451949-6451968 | Msa0233990:intron | 60.0% | |
| ! | GAGGTGTCTCCCCTCCAACT+AGG | - | chr2_2:6453388-6453407 | None:intergenic | 60.0% |
| TGATTGGGGCAAGGCCGCAA+GGG | - | chr2_2:6454198-6454217 | None:intergenic | 60.0% | |
| !! | AAGGGGGTGCCGCAAACCAG+TGG | - | chr2_2:6450828-6450847 | None:intergenic | 65.0% |
| ATCGACGGGAGCGACAACGG+CGG | + | chr2_2:6451392-6451411 | Msa0233990:intron | 65.0% | |
| ! | GGGAGCGACAACGGCGGATT+TGG | + | chr2_2:6451398-6451417 | Msa0233990:intron | 65.0% |
| GCTTCTTGCGGAGTGCACGG+AGG | + | chr2_2:6451499-6451518 | Msa0233990:intron | 65.0% | |
| CTGTGTGCGGCGGTGGTGAT+TGG | + | chr2_2:6451619-6451638 | Msa0233990:intron | 65.0% | |
| GTGATTGGGGCAAGGCCGCA+AGG | - | chr2_2:6454199-6454218 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 6447614 | 6454245 | 6447614 | ID=Msa0233990;Name=Msa0233990 |
| chr2_2 | mRNA | 6447614 | 6454245 | 6447614 | ID=Msa0233990-mRNA-1;Parent=Msa0233990;Name=Msa0233990-mRNA-1;_AED=0.13;_eAED=0.13;_QI=100|0.6|0.5|1|0.6|0.5|6|158|301 |
| chr2_2 | exon | 6447614 | 6447828 | 6447614 | ID=Msa0233990-mRNA-1:exon:2832;Parent=Msa0233990-mRNA-1 |
| chr2_2 | exon | 6448057 | 6448223 | 6448057 | ID=Msa0233990-mRNA-1:exon:2833;Parent=Msa0233990-mRNA-1 |
| chr2_2 | exon | 6448542 | 6448643 | 6448542 | ID=Msa0233990-mRNA-1:exon:2834;Parent=Msa0233990-mRNA-1 |
| chr2_2 | exon | 6453290 | 6453436 | 6453290 | ID=Msa0233990-mRNA-1:exon:2835;Parent=Msa0233990-mRNA-1 |
| chr2_2 | exon | 6453449 | 6453669 | 6453449 | ID=Msa0233990-mRNA-1:exon:2836;Parent=Msa0233990-mRNA-1 |
| chr2_2 | exon | 6453934 | 6454245 | 6453934 | ID=Msa0233990-mRNA-1:exon:2837;Parent=Msa0233990-mRNA-1 |
| chr2_2 | five_prime_UTR | 6447614 | 6447713 | 6447614 | ID=Msa0233990-mRNA-1:five_prime_utr;Parent=Msa0233990-mRNA-1 |
| chr2_2 | CDS | 6447714 | 6447828 | 6447714 | ID=Msa0233990-mRNA-1:cds;Parent=Msa0233990-mRNA-1 |
| chr2_2 | CDS | 6448057 | 6448223 | 6448057 | ID=Msa0233990-mRNA-1:cds;Parent=Msa0233990-mRNA-1 |
| chr2_2 | CDS | 6448542 | 6448643 | 6448542 | ID=Msa0233990-mRNA-1:cds;Parent=Msa0233990-mRNA-1 |
| chr2_2 | CDS | 6453290 | 6453436 | 6453290 | ID=Msa0233990-mRNA-1:cds;Parent=Msa0233990-mRNA-1 |
| chr2_2 | CDS | 6453449 | 6453669 | 6453449 | ID=Msa0233990-mRNA-1:cds;Parent=Msa0233990-mRNA-1 |
| chr2_2 | CDS | 6453934 | 6454087 | 6453934 | ID=Msa0233990-mRNA-1:cds;Parent=Msa0233990-mRNA-1 |
| chr2_2 | three_prime_UTR | 6454088 | 6454245 | 6454088 | ID=Msa0233990-mRNA-1:three_prime_utr;Parent=Msa0233990-mRNA-1 |
| Gene Sequence |
| Protein sequence |
