Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0241220 | XP_003594548.2 | 95.874 | 412 | 17 | 0 | 1 | 412 | 1 | 412 | 0.0 | 824 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0241220 | G7IKW8 | 95.874 | 412 | 17 | 0 | 1 | 412 | 1 | 412 | 0.0 | 824 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0241220 | Msa0597800 | 0.810679 | 1.022243e-50 | -8.615850e-47 |
| Msa0241220 | Msa0597820 | 0.815032 | 1.138066e-51 | -8.615850e-47 |
| Msa0241220 | Msa0855270 | 0.818403 | 1.996296e-52 | -8.615850e-47 |
| Msa0241220 | Msa0925940 | 0.806480 | 8.059182e-50 | -8.615850e-47 |
| Msa0241220 | Msa1212080 | 0.802505 | 5.435313e-49 | -8.615850e-47 |
| Msa0241220 | Msa1339530 | 0.808002 | 3.836017e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0241220 | MtrunA17_Chr2g0292581 | 95.874 | 412 | 17 | 0 | 1 | 412 | 1 | 412 | 0.0 | 824 |
| Msa0241220 | MtrunA17_Chr1g0173761 | 68.523 | 413 | 128 | 2 | 1 | 412 | 1 | 412 | 0.0 | 610 |
| Msa0241220 | MtrunA17_Chr2g0292611 | 65.278 | 432 | 128 | 2 | 2 | 412 | 21 | 451 | 0.0 | 597 |
| Msa0241220 | MtrunA17_Chr1g0173751 | 68.039 | 413 | 130 | 2 | 1 | 412 | 1 | 412 | 0.0 | 588 |
| Msa0241220 | MtrunA17_Chr2g0292621 | 66.667 | 408 | 135 | 1 | 1 | 408 | 1 | 407 | 0.0 | 582 |
| Msa0241220 | MtrunA17_Chr6g0468811 | 59.524 | 420 | 158 | 5 | 1 | 412 | 1 | 416 | 0.0 | 545 |
| Msa0241220 | MtrunA17_Chr4g0051701 | 60.952 | 420 | 153 | 5 | 1 | 412 | 1 | 417 | 0.0 | 543 |
| Msa0241220 | MtrunA17_Chr4g0051731 | 60.902 | 399 | 149 | 3 | 14 | 412 | 2 | 393 | 0.0 | 537 |
| Msa0241220 | MtrunA17_Chr4g0051681 | 58.432 | 421 | 163 | 3 | 1 | 412 | 1 | 418 | 0.0 | 536 |
| Msa0241220 | MtrunA17_Chr4g0051711 | 57.957 | 421 | 163 | 4 | 1 | 412 | 1 | 416 | 0.0 | 530 |
| Msa0241220 | MtrunA17_Chr4g0051821 | 57.524 | 412 | 165 | 3 | 9 | 412 | 7 | 416 | 0.0 | 528 |
| Msa0241220 | MtrunA17_Chr4g0051761 | 59.564 | 413 | 155 | 4 | 1 | 405 | 23 | 431 | 0.0 | 525 |
| Msa0241220 | MtrunA17_Chr6g0468791 | 59.950 | 397 | 146 | 5 | 23 | 412 | 20 | 410 | 0.0 | 518 |
| Msa0241220 | MtrunA17_Chr1g0180271 | 45.863 | 423 | 201 | 7 | 1 | 409 | 5 | 413 | 4.67e-132 | 386 |
| Msa0241220 | MtrunA17_Chr1g0180281 | 44.917 | 423 | 205 | 7 | 1 | 409 | 5 | 413 | 4.22e-130 | 381 |
| Msa0241220 | MtrunA17_Chr8g0353201 | 43.262 | 423 | 210 | 9 | 1 | 409 | 1 | 407 | 7.01e-127 | 372 |
| Msa0241220 | MtrunA17_Chr6g0487311 | 43.056 | 432 | 212 | 9 | 1 | 409 | 1 | 421 | 5.14e-126 | 370 |
| Msa0241220 | MtrunA17_Chr6g0487401 | 42.790 | 423 | 192 | 7 | 1 | 409 | 33 | 419 | 1.84e-123 | 364 |
| Msa0241220 | MtrunA17_Chr4g0051791 | 54.515 | 299 | 101 | 3 | 114 | 412 | 7 | 270 | 4.12e-119 | 348 |
| Msa0241220 | MtrunA17_Chr2g0292631 | 68.539 | 178 | 56 | 0 | 1 | 178 | 1 | 178 | 1.32e-90 | 271 |
| Msa0241220 | MtrunA17_Chr6g0471901 | 35.934 | 423 | 193 | 9 | 1 | 409 | 1 | 359 | 1.77e-85 | 265 |
| Msa0241220 | MtrunA17_Chr2g0292641 | 65.432 | 162 | 56 | 0 | 251 | 412 | 1 | 162 | 2.52e-72 | 224 |
| Msa0241220 | MtrunA17_Chr1g0162771 | 41.850 | 227 | 110 | 7 | 1 | 212 | 1 | 220 | 1.71e-53 | 177 |
| Msa0241220 | MtrunA17_Chr4g0051801 | 60.204 | 98 | 36 | 2 | 1 | 98 | 1 | 95 | 1.88e-35 | 125 |
| Msa0241220 | MtrunA17_Chr1g0162761 | 65.278 | 72 | 25 | 0 | 309 | 380 | 1 | 72 | 6.25e-28 | 105 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0241220 | AT5G61820.2 | 50.478 | 418 | 177 | 7 | 14 | 409 | 11 | 420 | 8.73e-145 | 421 |
| Msa0241220 | AT5G61820.1 | 50.478 | 418 | 177 | 7 | 14 | 409 | 11 | 420 | 8.73e-145 | 421 |
Find 99 sgRNAs with CRISPR-Local
Find 278 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCATTCCAGTTCCATATTT+TGG | 0.072146 | 2_2:-16670938 | None:intergenic |
| CCTAAACCTCCTTTGTAATT+TGG | 0.119485 | 2_2:-16670012 | None:intergenic |
| CCTTTGTAATTTGGACTTAA+AGG | 0.120999 | 2_2:-16670003 | None:intergenic |
| CCTGGACTTAATTCAATCTT+AGG | 0.232069 | 2_2:-16669523 | None:intergenic |
| AATGGGACATTTCTATTTCT+TGG | 0.240338 | 2_2:+16671093 | Msa0241220:CDS |
| GCTGAACTAGTAGATGAATA+TGG | 0.253004 | 2_2:+16669616 | Msa0241220:CDS |
| CCAAATTACAAAGGAGGTTT+AGG | 0.264358 | 2_2:+16670012 | Msa0241220:CDS |
| ATTATTATGGTGAGAAATAA+TGG | 0.269974 | 2_2:+16669733 | Msa0241220:CDS |
| ACTACCATTCCCATGGCTTT+TGG | 0.289841 | 2_2:-16670356 | None:intergenic |
| AGATTAAATGTCACATATTA+TGG | 0.290947 | 2_2:-16671135 | None:intergenic |
| AATGGTGAAGATAAGTTTCT+TGG | 0.294271 | 2_2:-16669654 | None:intergenic |
| CCCACATAATTGTGTACTTT+AGG | 0.295452 | 2_2:-16670101 | None:intergenic |
| TGCAACTCAATCCCAAAATA+TGG | 0.295691 | 2_2:+16670926 | Msa0241220:CDS |
| ACATATATTCCTGACCCTTA+TGG | 0.320031 | 2_2:+16669820 | Msa0241220:CDS |
| CTCAAGATTGGATGCTTTCA+TGG | 0.320835 | 2_2:+16669404 | Msa0241220:CDS |
| GACCCTTATGGAGTAGAAAT+TGG | 0.321397 | 2_2:+16669832 | Msa0241220:CDS |
| ATCTTGATAGAACCTGGTTT+AGG | 0.327289 | 2_2:-16671007 | None:intergenic |
| TTATGCCAAGATGATATTCT+TGG | 0.334835 | 2_2:+16669757 | Msa0241220:CDS |
| TCTTGATAGAACCTGGTTTA+GGG | 0.341330 | 2_2:-16671006 | None:intergenic |
| AATCTACATTGACCATTATC+AGG | 0.346043 | 2_2:-16670042 | None:intergenic |
| CATTTATTGTAACGTTATAT+AGG | 0.358741 | 2_2:-16669966 | None:intergenic |
| ACACAATTATGTGGGTTGAT+TGG | 0.359043 | 2_2:+16670109 | Msa0241220:CDS |
| TCAAGTAAGTAAATCTTAAC+TGG | 0.369070 | 2_2:-16670147 | None:intergenic |
| GCGATTAGATCAACCCTATA+TGG | 0.370275 | 2_2:+16670463 | Msa0241220:CDS |
| TTAGGATGTTGTCCTGATAA+TGG | 0.372817 | 2_2:+16670030 | Msa0241220:CDS |
| TAACCAAACAGATATTATTA+TGG | 0.372909 | 2_2:+16669720 | Msa0241220:CDS |
| GATATTCTTGGACAATACTA+TGG | 0.376133 | 2_2:+16669769 | Msa0241220:CDS |
| CACAATTATGTGGGTTGATT+GGG | 0.382907 | 2_2:+16670110 | Msa0241220:CDS |
| TTACCAATTTCTACTCCATA+AGG | 0.383266 | 2_2:-16669835 | None:intergenic |
| CTTGGACAATACTATGGCCT+TGG | 0.391717 | 2_2:+16669775 | Msa0241220:CDS |
| AATTTGTTTGAAATTGATCC+TGG | 0.396040 | 2_2:-16669541 | None:intergenic |
| TCACCATAATAATATCTGTT+TGG | 0.399279 | 2_2:-16669723 | None:intergenic |
| CATAATGCACACCGGTGTAA+TGG | 0.410797 | 2_2:+16671075 | Msa0241220:CDS |
| GGTTCTATCAAGATATTTGA+TGG | 0.412273 | 2_2:+16671016 | Msa0241220:CDS |
| ACCTAAAGTACACAATTATG+TGG | 0.432101 | 2_2:+16670100 | Msa0241220:CDS |
| AATGAGAAAGGGTATCTTGT+AGG | 0.436332 | 2_2:+16670968 | Msa0241220:CDS |
| ATGACATACCTGTCCATATA+GGG | 0.438172 | 2_2:-16670476 | None:intergenic |
| ATAATGCACACCGGTGTAAT+GGG | 0.442600 | 2_2:+16671076 | Msa0241220:CDS |
| TTGAGTGCAATATGACCCTT+TGG | 0.444188 | 2_2:-16669583 | None:intergenic |
| AAGGGGTGTGGAAGATAGAA+TGG | 0.449147 | 2_2:+16669921 | Msa0241220:CDS |
| ATGTTTGATGCTCATTCCAT+TGG | 0.452261 | 2_2:-16670202 | None:intergenic |
| TCAATCCCAAAATATGGAAC+TGG | 0.455772 | 2_2:+16670932 | Msa0241220:CDS |
| CATGACATACCTGTCCATAT+AGG | 0.458282 | 2_2:-16670477 | None:intergenic |
| ATCCTTCACAAATTCCTAAA+GGG | 0.463218 | 2_2:+16669857 | Msa0241220:CDS |
| AAGAAACTTATCTTCACCAT+TGG | 0.467809 | 2_2:+16669656 | Msa0241220:CDS |
| CTGAACTAGTAGATGAATAT+GGG | 0.470249 | 2_2:+16669617 | Msa0241220:CDS |
| AATCCTTCACAAATTCCTAA+AGG | 0.481001 | 2_2:+16669856 | Msa0241220:CDS |
| TACCAATTTCTACTCCATAA+GGG | 0.483211 | 2_2:-16669834 | None:intergenic |
| TGTTTGATGCTCATTCCATT+GGG | 0.484253 | 2_2:-16670201 | None:intergenic |
| AGGGGTGTGGAAGATAGAAT+GGG | 0.489368 | 2_2:+16669922 | Msa0241220:CDS |
| GTTACAATAAATGCATTAAG+TGG | 0.500168 | 2_2:+16669976 | Msa0241220:CDS |
| GGCATTAATGTTAGGATGGG+AGG | 0.502702 | 2_2:+16670897 | Msa0241220:intron |
| CCTAAGATTGAATTAAGTCC+AGG | 0.504942 | 2_2:+16669523 | Msa0241220:CDS |
| ATTTCTACTCCATAAGGGTC+AGG | 0.506350 | 2_2:-16669829 | None:intergenic |
| ATTGTCCAAGAATATCATCT+TGG | 0.520826 | 2_2:-16669762 | None:intergenic |
| ATGTCCATGCAATTGATACA+AGG | 0.523091 | 2_2:+16669902 | Msa0241220:CDS |
| TAATTGTGTACTTTAGGTAA+AGG | 0.526319 | 2_2:-16670095 | None:intergenic |
| TATGATGTTGAATTTCCAAA+GGG | 0.528720 | 2_2:+16669568 | Msa0241220:CDS |
| TCAAGATTGGATGCTTTCAT+GGG | 0.528759 | 2_2:+16669405 | Msa0241220:CDS |
| ATGGAAGCAGGAAATGAGAA+AGG | 0.530156 | 2_2:+16670956 | Msa0241220:CDS |
| AAAAGCCATGGGAATGGTAG+TGG | 0.532477 | 2_2:+16670358 | Msa0241220:CDS |
| TGCAATTGATACAAGGGGTG+TGG | 0.533630 | 2_2:+16669909 | Msa0241220:CDS |
| CCCAAAATATGGAACTGGAA+TGG | 0.534405 | 2_2:+16670937 | Msa0241220:CDS |
| TATGGAACTGGAATGGAAGC+AGG | 0.536281 | 2_2:+16670944 | Msa0241220:CDS |
| TGCCTCTAGTTTCAGCTCCA+AGG | 0.544329 | 2_2:-16669792 | None:intergenic |
| CACCCCTTGTATCAATTGCA+TGG | 0.547570 | 2_2:-16669906 | None:intergenic |
| GGGACATTTCTATTTCTTGG+TGG | 0.548487 | 2_2:+16671096 | Msa0241220:CDS |
| TAGATCAACCCTATATGGAC+AGG | 0.548766 | 2_2:+16670468 | Msa0241220:CDS |
| TCAAATATCTTGATAGAACC+TGG | 0.548862 | 2_2:-16671013 | None:intergenic |
| GGTTATATAATCTACAGTGC+TGG | 0.556126 | 2_2:+16670424 | Msa0241220:CDS |
| TTATGATGTTGAATTTCCAA+AGG | 0.557376 | 2_2:+16669567 | Msa0241220:CDS |
| ACAAGTGTCCCAATAAAAGC+TGG | 0.561803 | 2_2:+16670400 | Msa0241220:CDS |
| AAACGTTGCACCAAAAGCCA+TGG | 0.562734 | 2_2:+16670346 | Msa0241220:CDS |
| AAAATATCATATAATCCCAA+TGG | 0.565537 | 2_2:+16670186 | Msa0241220:CDS |
| ATAATGGTCAATGTAGATTG+AGG | 0.569226 | 2_2:+16670046 | Msa0241220:CDS |
| TTAAGTCCAAATTACAAAGG+AGG | 0.571780 | 2_2:+16670006 | Msa0241220:CDS |
| GCATTAATGTTAGGATGGGA+GGG | 0.573100 | 2_2:+16670898 | Msa0241220:intron |
| TGCACCAAAAGCCATGGGAA+TGG | 0.582420 | 2_2:+16670352 | Msa0241220:CDS |
| CCTAAAGTACACAATTATGT+GGG | 0.583692 | 2_2:+16670101 | Msa0241220:CDS |
| GGCAATCTTAGTGCTAGTGT+TGG | 0.593029 | 2_2:+16669426 | Msa0241220:CDS |
| TACCCTTTAGGAATTTGTGA+AGG | 0.593512 | 2_2:-16669859 | None:intergenic |
| TGGAAGCAGGAAATGAGAAA+GGG | 0.595316 | 2_2:+16670957 | Msa0241220:CDS |
| AACGTTGCACCAAAAGCCAT+GGG | 0.602557 | 2_2:+16670347 | Msa0241220:CDS |
| GAGCATCAAACATAATTGCA+AGG | 0.603328 | 2_2:+16670212 | Msa0241220:CDS |
| TGAAGATAAGTTTCTTGGAG+AGG | 0.609861 | 2_2:-16669649 | None:intergenic |
| TGTCCATGCAATTGATACAA+GGG | 0.611124 | 2_2:+16669903 | Msa0241220:CDS |
| GGCCTTGGAGCTGAAACTAG+AGG | 0.615056 | 2_2:+16669790 | Msa0241220:CDS |
| CTGTTGGTAGCTAATAAGCA+TGG | 0.615939 | 2_2:-16669460 | None:intergenic |
| GGTCAATGTAGATTGAGGAA+AGG | 0.621157 | 2_2:+16670051 | Msa0241220:CDS |
| CACAACCACTACCATTCCCA+TGG | 0.624715 | 2_2:-16670363 | None:intergenic |
| AGTGCTGGTCATCAACATGT+AGG | 0.634573 | 2_2:+16670439 | Msa0241220:CDS |
| GTCCATGCAATTGATACAAG+GGG | 0.639292 | 2_2:+16669904 | Msa0241220:CDS |
| CCTTTAAGTCCAAATTACAA+AGG | 0.642182 | 2_2:+16670003 | Msa0241220:CDS |
| AAATGTCACATATTATGGTG+TGG | 0.646923 | 2_2:-16671130 | None:intergenic |
| TCAACTTGCTACCCTAAACC+AGG | 0.667040 | 2_2:+16670995 | Msa0241220:CDS |
| ATAGAAATGTCCCATTACAC+CGG | 0.668859 | 2_2:-16671086 | None:intergenic |
| GGGGTGTGGAAGATAGAATG+GGG | 0.677538 | 2_2:+16669923 | Msa0241220:CDS |
| AGTGTCCCAATAAAAGCTGG+TGG | 0.684240 | 2_2:+16670403 | Msa0241220:CDS |
| AACAACAGCATAATGCACAC+CGG | 0.718055 | 2_2:+16671067 | Msa0241220:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTATATATTTTTTACCT+TGG | + | chr2_2:16670783-16670802 | Msa0241220:intron | 10.0% |
| !!! | AAGTTTTAACTTTTAAAAAT+TGG | - | chr2_2:16670870-16670889 | None:intergenic | 10.0% |
| !!! | ATTTTTAAAAGTTAAAACTT+TGG | + | chr2_2:16670870-16670889 | Msa0241220:intron | 10.0% |
| !!! | TTTTTATATATTTTTTACCT+TGG | + | chr2_2:16670783-16670802 | Msa0241220:intron | 10.0% |
| !!! | AAGTTTTAACTTTTAAAAAT+TGG | - | chr2_2:16670870-16670889 | None:intergenic | 10.0% |
| !!! | ATTTTTAAAAGTTAAAACTT+TGG | + | chr2_2:16670870-16670889 | Msa0241220:intron | 10.0% |
| !! | TATATGTGAAAAACATTATT+TGG | + | chr2_2:16670255-16670274 | Msa0241220:intron | 15.0% |
| !!! | GGTTTAATTTTTTAAAACAT+TGG | - | chr2_2:16670636-16670655 | None:intergenic | 15.0% |
| !! | TATATGTGAAAAACATTATT+TGG | + | chr2_2:16670255-16670274 | Msa0241220:intron | 15.0% |
| !!! | GGTTTAATTTTTTAAAACAT+TGG | - | chr2_2:16670636-16670655 | None:intergenic | 15.0% |
| !!! | TTATTGTTTGTCACATTTTT+AGG | - | chr2_2:16669703-16669722 | None:intergenic | 20.0% |
| !! | TAACCAAACAGATATTATTA+TGG | + | chr2_2:16669720-16669739 | Msa0241220:CDS | 20.0% |
| !! | ATTATTATGGTGAGAAATAA+TGG | + | chr2_2:16669733-16669752 | Msa0241220:CDS | 20.0% |
| !! | CATTTATTGTAACGTTATAT+AGG | - | chr2_2:16669969-16669988 | None:intergenic | 20.0% |
| !! | AAAATATCATATAATCCCAA+TGG | + | chr2_2:16670186-16670205 | Msa0241220:CDS | 20.0% |
| !! | CTCAATTAAATATGCTAATT+TGG | - | chr2_2:16670657-16670676 | None:intergenic | 20.0% |
| !! | ATTATTATGGTGAGAAATAA+TGG | - | chr2_2:16669733-16669752 | None:intergenic | 20.0% |
| !! | TAACCAAACAGATATTATTA+TGG | - | chr2_2:16669720-16669739 | None:intergenic | 20.0% |
| !!! | TTATTGTTTGTCACATTTTT+AGG | - | chr2_2:16669703-16669722 | None:intergenic | 20.0% |
| !! | TAACCAAACAGATATTATTA+TGG | + | chr2_2:16669720-16669739 | Msa0241220:CDS | 20.0% |
| !! | ATTATTATGGTGAGAAATAA+TGG | + | chr2_2:16669733-16669752 | Msa0241220:CDS | 20.0% |
| !! | CATTTATTGTAACGTTATAT+AGG | - | chr2_2:16669969-16669988 | None:intergenic | 20.0% |
| !! | AAAATATCATATAATCCCAA+TGG | + | chr2_2:16670186-16670205 | Msa0241220:CDS | 20.0% |
| !! | CTCAATTAAATATGCTAATT+TGG | - | chr2_2:16670657-16670676 | None:intergenic | 20.0% |
| !! | ATTATTATGGTGAGAAATAA+TGG | - | chr2_2:16669733-16669752 | None:intergenic | 20.0% |
| !! | TAACCAAACAGATATTATTA+TGG | - | chr2_2:16669720-16669739 | None:intergenic | 20.0% |
| !!! | ATTGTTTTTGGTATTTCTGT+TGG | - | chr2_2:16669479-16669498 | None:intergenic | 25.0% |
| ! | CAAAAACAATGTTAAATCAG+CGG | + | chr2_2:16669489-16669508 | Msa0241220:CDS | 25.0% |
| !! | AATTTGTTTGAAATTGATCC+TGG | - | chr2_2:16669544-16669563 | None:intergenic | 25.0% |
| ! | TTATGATGTTGAATTTCCAA+AGG | + | chr2_2:16669567-16669586 | Msa0241220:CDS | 25.0% |
| ! | TATGATGTTGAATTTCCAAA+GGG | + | chr2_2:16669568-16669587 | Msa0241220:CDS | 25.0% |
| ! | TCACCATAATAATATCTGTT+TGG | - | chr2_2:16670822-16670841 | None:intergenic | 25.0% |
| ! | GTTACAATAAATGCATTAAG+TGG | + | chr2_2:16669976-16669995 | Msa0241220:CDS | 25.0% |
| ! | TAATTGTGTACTTTAGGTAA+AGG | - | chr2_2:16670098-16670117 | None:intergenic | 25.0% |
| ! | TCAAGTAAGTAAATCTTAAC+TGG | - | chr2_2:16670150-16670169 | None:intergenic | 25.0% |
| ! | AACAAATAAGATCAAACCAA+TGG | - | chr2_2:16670695-16670714 | None:intergenic | 25.0% |
| ! | TCACCATAATAATATCTGTT+TGG | + | chr2_2:16670822-16670841 | Msa0241220:intron | 25.0% |
| ! | AAAAGTTAAAACTTTGGTTG+TGG | + | chr2_2:16670876-16670895 | Msa0241220:intron | 25.0% |
| !!! | ATTGTTTTTGGTATTTCTGT+TGG | - | chr2_2:16669479-16669498 | None:intergenic | 25.0% |
| ! | CAAAAACAATGTTAAATCAG+CGG | + | chr2_2:16669489-16669508 | Msa0241220:CDS | 25.0% |
| !! | AATTTGTTTGAAATTGATCC+TGG | - | chr2_2:16669544-16669563 | None:intergenic | 25.0% |
| ! | TTATGATGTTGAATTTCCAA+AGG | + | chr2_2:16669567-16669586 | Msa0241220:CDS | 25.0% |
| ! | TATGATGTTGAATTTCCAAA+GGG | + | chr2_2:16669568-16669587 | Msa0241220:CDS | 25.0% |
| ! | TCACCATAATAATATCTGTT+TGG | - | chr2_2:16670822-16670841 | None:intergenic | 25.0% |
| ! | GTTACAATAAATGCATTAAG+TGG | + | chr2_2:16669976-16669995 | Msa0241220:CDS | 25.0% |
| ! | TAATTGTGTACTTTAGGTAA+AGG | - | chr2_2:16670098-16670117 | None:intergenic | 25.0% |
| ! | TCAAGTAAGTAAATCTTAAC+TGG | - | chr2_2:16670150-16670169 | None:intergenic | 25.0% |
| ! | AACAAATAAGATCAAACCAA+TGG | - | chr2_2:16670695-16670714 | None:intergenic | 25.0% |
| ! | TCACCATAATAATATCTGTT+TGG | + | chr2_2:16670822-16670841 | Msa0241220:intron | 25.0% |
| ! | AAAAGTTAAAACTTTGGTTG+TGG | + | chr2_2:16670876-16670895 | Msa0241220:intron | 25.0% |
| ! | TGAGGTTTTTATCTCAAGAT+TGG | + | chr2_2:16669392-16669411 | Msa0241220:CDS | 30.0% |
| !!! | CGCTGATTTAACATTGTTTT+TGG | - | chr2_2:16669491-16669510 | None:intergenic | 30.0% |
| CTGAACTAGTAGATGAATAT+GGG | + | chr2_2:16669617-16669636 | Msa0241220:CDS | 30.0% | |
| AATGGTGAAGATAAGTTTCT+TGG | - | chr2_2:16669657-16669676 | None:intergenic | 30.0% | |
| AAGAAACTTATCTTCACCAT+TGG | + | chr2_2:16669656-16669675 | Msa0241220:CDS | 30.0% | |
| !!! | GGTATTTTAGAACAATCCAA+TGG | - | chr2_2:16669675-16669694 | None:intergenic | 30.0% |
| !!! | TTGTCACATTTTTAGGTTGT+TGG | - | chr2_2:16669696-16669715 | None:intergenic | 30.0% |
| TTATGCCAAGATGATATTCT+TGG | + | chr2_2:16669757-16669776 | Msa0241220:CDS | 30.0% | |
| ATTGTCCAAGAATATCATCT+TGG | - | chr2_2:16669765-16669784 | None:intergenic | 30.0% | |
| GATATTCTTGGACAATACTA+TGG | + | chr2_2:16669769-16669788 | Msa0241220:CDS | 30.0% | |
| TACCAATTTCTACTCCATAA+GGG | - | chr2_2:16669837-16669856 | None:intergenic | 30.0% | |
| TTACCAATTTCTACTCCATA+AGG | - | chr2_2:16669838-16669857 | None:intergenic | 30.0% | |
| AATCCTTCACAAATTCCTAA+AGG | + | chr2_2:16669856-16669875 | Msa0241220:CDS | 30.0% | |
| ATCCTTCACAAATTCCTAAA+GGG | + | chr2_2:16669857-16669876 | Msa0241220:CDS | 30.0% | |
| ! | CATTTTTCATCATACCCTTT+AGG | - | chr2_2:16669874-16669893 | None:intergenic | 30.0% |
| ! | CTAAAGGGTATGATGAAAAA+TGG | + | chr2_2:16669872-16669891 | Msa0241220:CDS | 30.0% |
| CCTTTGTAATTTGGACTTAA+AGG | - | chr2_2:16670006-16670025 | None:intergenic | 30.0% | |
| CCTTTAAGTCCAAATTACAA+AGG | + | chr2_2:16670003-16670022 | Msa0241220:CDS | 30.0% | |
| TTAAGTCCAAATTACAAAGG+AGG | + | chr2_2:16670006-16670025 | Msa0241220:CDS | 30.0% | |
| AATCTACATTGACCATTATC+AGG | - | chr2_2:16670045-16670064 | None:intergenic | 30.0% | |
| ATAATGGTCAATGTAGATTG+AGG | + | chr2_2:16670046-16670065 | Msa0241220:CDS | 30.0% | |
| ACCTAAAGTACACAATTATG+TGG | + | chr2_2:16670100-16670119 | Msa0241220:CDS | 30.0% | |
| CCTAAAGTACACAATTATGT+GGG | + | chr2_2:16670101-16670120 | Msa0241220:CDS | 30.0% | |
| ACTCATTGTGCTTGATATAT+AGG | + | chr2_2:16670309-16670328 | Msa0241220:intron | 30.0% | |
| ! | TATAACCACCAGCTTTTATT+GGG | - | chr2_2:16670411-16670430 | None:intergenic | 30.0% |
| ! | ATATAACCACCAGCTTTTAT+TGG | - | chr2_2:16670412-16670431 | None:intergenic | 30.0% |
| !! | AGAAATAATGGATTATGCCA+AGG | - | chr2_2:16669745-16669764 | None:intergenic | 30.0% |
| TCAAATATCTTGATAGAACC+TGG | - | chr2_2:16671016-16671035 | None:intergenic | 30.0% | |
| GGTTCTATCAAGATATTTGA+TGG | + | chr2_2:16671016-16671035 | Msa0241220:CDS | 30.0% | |
| ! | AATGGGACATTTCTATTTCT+TGG | + | chr2_2:16671093-16671112 | Msa0241220:CDS | 30.0% |
| ! | TGAGGTTTTTATCTCAAGAT+TGG | + | chr2_2:16669392-16669411 | Msa0241220:CDS | 30.0% |
| !!! | CGCTGATTTAACATTGTTTT+TGG | - | chr2_2:16669491-16669510 | None:intergenic | 30.0% |
| CTGAACTAGTAGATGAATAT+GGG | + | chr2_2:16669617-16669636 | Msa0241220:CDS | 30.0% | |
| AATGGTGAAGATAAGTTTCT+TGG | - | chr2_2:16669657-16669676 | None:intergenic | 30.0% | |
| AAGAAACTTATCTTCACCAT+TGG | + | chr2_2:16669656-16669675 | Msa0241220:CDS | 30.0% | |
| !!! | GGTATTTTAGAACAATCCAA+TGG | - | chr2_2:16669675-16669694 | None:intergenic | 30.0% |
| !!! | TTGTCACATTTTTAGGTTGT+TGG | - | chr2_2:16669696-16669715 | None:intergenic | 30.0% |
| TTATGCCAAGATGATATTCT+TGG | + | chr2_2:16669757-16669776 | Msa0241220:CDS | 30.0% | |
| ATTGTCCAAGAATATCATCT+TGG | - | chr2_2:16669765-16669784 | None:intergenic | 30.0% | |
| GATATTCTTGGACAATACTA+TGG | + | chr2_2:16669769-16669788 | Msa0241220:CDS | 30.0% | |
| TACCAATTTCTACTCCATAA+GGG | - | chr2_2:16669837-16669856 | None:intergenic | 30.0% | |
| TTACCAATTTCTACTCCATA+AGG | - | chr2_2:16669838-16669857 | None:intergenic | 30.0% | |
| AATCCTTCACAAATTCCTAA+AGG | + | chr2_2:16669856-16669875 | Msa0241220:CDS | 30.0% | |
| ATCCTTCACAAATTCCTAAA+GGG | + | chr2_2:16669857-16669876 | Msa0241220:CDS | 30.0% | |
| ! | CATTTTTCATCATACCCTTT+AGG | - | chr2_2:16669874-16669893 | None:intergenic | 30.0% |
| ! | CTAAAGGGTATGATGAAAAA+TGG | + | chr2_2:16669872-16669891 | Msa0241220:CDS | 30.0% |
| CCTTTGTAATTTGGACTTAA+AGG | - | chr2_2:16670006-16670025 | None:intergenic | 30.0% | |
| CCTTTAAGTCCAAATTACAA+AGG | + | chr2_2:16670003-16670022 | Msa0241220:CDS | 30.0% | |
| TTAAGTCCAAATTACAAAGG+AGG | + | chr2_2:16670006-16670025 | Msa0241220:CDS | 30.0% | |
| AATCTACATTGACCATTATC+AGG | - | chr2_2:16670045-16670064 | None:intergenic | 30.0% | |
| ATAATGGTCAATGTAGATTG+AGG | + | chr2_2:16670046-16670065 | Msa0241220:CDS | 30.0% | |
| ACCTAAAGTACACAATTATG+TGG | + | chr2_2:16670100-16670119 | Msa0241220:CDS | 30.0% | |
| CCTAAAGTACACAATTATGT+GGG | + | chr2_2:16670101-16670120 | Msa0241220:CDS | 30.0% | |
| ACTCATTGTGCTTGATATAT+AGG | + | chr2_2:16670309-16670328 | Msa0241220:intron | 30.0% | |
| ! | TATAACCACCAGCTTTTATT+GGG | - | chr2_2:16670411-16670430 | None:intergenic | 30.0% |
| ! | ATATAACCACCAGCTTTTAT+TGG | - | chr2_2:16670412-16670431 | None:intergenic | 30.0% |
| !! | AGAAATAATGGATTATGCCA+AGG | - | chr2_2:16669745-16669764 | None:intergenic | 30.0% |
| TCAAATATCTTGATAGAACC+TGG | - | chr2_2:16671016-16671035 | None:intergenic | 30.0% | |
| GGTTCTATCAAGATATTTGA+TGG | + | chr2_2:16671016-16671035 | Msa0241220:CDS | 30.0% | |
| ! | AATGGGACATTTCTATTTCT+TGG | + | chr2_2:16671093-16671112 | Msa0241220:CDS | 30.0% |
| TCAAGATTGGATGCTTTCAT+GGG | + | chr2_2:16669405-16669424 | Msa0241220:CDS | 35.0% | |
| CCTGGACTTAATTCAATCTT+AGG | - | chr2_2:16669526-16669545 | None:intergenic | 35.0% | |
| CCTAAGATTGAATTAAGTCC+AGG | + | chr2_2:16669523-16669542 | Msa0241220:CDS | 35.0% | |
| GCTGAACTAGTAGATGAATA+TGG | + | chr2_2:16669616-16669635 | Msa0241220:CDS | 35.0% | |
| TGAAGATAAGTTTCTTGGAG+AGG | - | chr2_2:16669652-16669671 | None:intergenic | 35.0% | |
| ACATATATTCCTGACCCTTA+TGG | + | chr2_2:16669820-16669839 | Msa0241220:CDS | 35.0% | |
| ! | TACCCTTTAGGAATTTGTGA+AGG | - | chr2_2:16669862-16669881 | None:intergenic | 35.0% |
| ATGTCCATGCAATTGATACA+AGG | + | chr2_2:16669902-16669921 | Msa0241220:CDS | 35.0% | |
| TGTCCATGCAATTGATACAA+GGG | + | chr2_2:16669903-16669922 | Msa0241220:CDS | 35.0% | |
| CCTAAACCTCCTTTGTAATT+TGG | - | chr2_2:16670015-16670034 | None:intergenic | 35.0% | |
| CCAAATTACAAAGGAGGTTT+AGG | + | chr2_2:16670012-16670031 | Msa0241220:CDS | 35.0% | |
| TTAGGATGTTGTCCTGATAA+TGG | + | chr2_2:16670030-16670049 | Msa0241220:CDS | 35.0% | |
| ! | TAGATTGAGGAAAGGCTTTT+TGG | + | chr2_2:16670059-16670078 | Msa0241220:CDS | 35.0% |
| ! | AGATTGAGGAAAGGCTTTTT+GGG | + | chr2_2:16670060-16670079 | Msa0241220:CDS | 35.0% |
| CCCACATAATTGTGTACTTT+AGG | - | chr2_2:16670104-16670123 | None:intergenic | 35.0% | |
| !! | ACACAATTATGTGGGTTGAT+TGG | + | chr2_2:16670109-16670128 | Msa0241220:CDS | 35.0% |
| !! | CACAATTATGTGGGTTGATT+GGG | + | chr2_2:16670110-16670129 | Msa0241220:CDS | 35.0% |
| TGTTTGATGCTCATTCCATT+GGG | - | chr2_2:16670204-16670223 | None:intergenic | 35.0% | |
| ATGTTTGATGCTCATTCCAT+TGG | - | chr2_2:16670205-16670224 | None:intergenic | 35.0% | |
| GAGCATCAAACATAATTGCA+AGG | + | chr2_2:16670212-16670231 | Msa0241220:CDS | 35.0% | |
| GGTTATATAATCTACAGTGC+TGG | + | chr2_2:16670424-16670443 | Msa0241220:CDS | 35.0% | |
| ATGACATACCTGTCCATATA+GGG | - | chr2_2:16670479-16670498 | None:intergenic | 35.0% | |
| CTAGTTGAACCAAATTCAAC+CGG | + | chr2_2:16670722-16670741 | Msa0241220:intron | 35.0% | |
| TTGGTTGTGGCATTAATGTT+AGG | + | chr2_2:16670889-16670908 | Msa0241220:intron | 35.0% | |
| TTGTGGCATTAATGTTAGGA+TGG | + | chr2_2:16670893-16670912 | Msa0241220:intron | 35.0% | |
| TGTGGCATTAATGTTAGGAT+GGG | + | chr2_2:16670894-16670913 | Msa0241220:intron | 35.0% | |
| TGCAACTCAATCCCAAAATA+TGG | + | chr2_2:16670926-16670945 | Msa0241220:CDS | 35.0% | |
| TCAATCCCAAAATATGGAAC+TGG | + | chr2_2:16670932-16670951 | Msa0241220:CDS | 35.0% | |
| ! | CCATTCCAGTTCCATATTTT+GGG | - | chr2_2:16670940-16670959 | None:intergenic | 35.0% |
| ! | TCCATTCCAGTTCCATATTT+TGG | - | chr2_2:16670941-16670960 | None:intergenic | 35.0% |
| !! | AATGAGAAAGGGTATCTTGT+AGG | + | chr2_2:16670968-16670987 | Msa0241220:CDS | 35.0% |
| TCTTGATAGAACCTGGTTTA+GGG | - | chr2_2:16671009-16671028 | None:intergenic | 35.0% | |
| ATCTTGATAGAACCTGGTTT+AGG | - | chr2_2:16671010-16671029 | None:intergenic | 35.0% | |
| ATAGAAATGTCCCATTACAC+CGG | - | chr2_2:16671089-16671108 | None:intergenic | 35.0% | |
| TCAAGATTGGATGCTTTCAT+GGG | + | chr2_2:16669405-16669424 | Msa0241220:CDS | 35.0% | |
| CCTGGACTTAATTCAATCTT+AGG | - | chr2_2:16669526-16669545 | None:intergenic | 35.0% | |
| CCTAAGATTGAATTAAGTCC+AGG | + | chr2_2:16669523-16669542 | Msa0241220:CDS | 35.0% | |
| GCTGAACTAGTAGATGAATA+TGG | + | chr2_2:16669616-16669635 | Msa0241220:CDS | 35.0% | |
| TGAAGATAAGTTTCTTGGAG+AGG | - | chr2_2:16669652-16669671 | None:intergenic | 35.0% | |
| ACATATATTCCTGACCCTTA+TGG | + | chr2_2:16669820-16669839 | Msa0241220:CDS | 35.0% | |
| ! | TACCCTTTAGGAATTTGTGA+AGG | - | chr2_2:16669862-16669881 | None:intergenic | 35.0% |
| ATGTCCATGCAATTGATACA+AGG | + | chr2_2:16669902-16669921 | Msa0241220:CDS | 35.0% | |
| TGTCCATGCAATTGATACAA+GGG | + | chr2_2:16669903-16669922 | Msa0241220:CDS | 35.0% | |
| CCTAAACCTCCTTTGTAATT+TGG | - | chr2_2:16670015-16670034 | None:intergenic | 35.0% | |
| CCAAATTACAAAGGAGGTTT+AGG | + | chr2_2:16670012-16670031 | Msa0241220:CDS | 35.0% | |
| TTAGGATGTTGTCCTGATAA+TGG | + | chr2_2:16670030-16670049 | Msa0241220:CDS | 35.0% | |
| ! | TAGATTGAGGAAAGGCTTTT+TGG | + | chr2_2:16670059-16670078 | Msa0241220:CDS | 35.0% |
| ! | AGATTGAGGAAAGGCTTTTT+GGG | + | chr2_2:16670060-16670079 | Msa0241220:CDS | 35.0% |
| CCCACATAATTGTGTACTTT+AGG | - | chr2_2:16670104-16670123 | None:intergenic | 35.0% | |
| !! | ACACAATTATGTGGGTTGAT+TGG | + | chr2_2:16670109-16670128 | Msa0241220:CDS | 35.0% |
| !! | CACAATTATGTGGGTTGATT+GGG | + | chr2_2:16670110-16670129 | Msa0241220:CDS | 35.0% |
| TGTTTGATGCTCATTCCATT+GGG | - | chr2_2:16670204-16670223 | None:intergenic | 35.0% | |
| ATGTTTGATGCTCATTCCAT+TGG | - | chr2_2:16670205-16670224 | None:intergenic | 35.0% | |
| GAGCATCAAACATAATTGCA+AGG | + | chr2_2:16670212-16670231 | Msa0241220:CDS | 35.0% | |
| GGTTATATAATCTACAGTGC+TGG | + | chr2_2:16670424-16670443 | Msa0241220:CDS | 35.0% | |
| ATGACATACCTGTCCATATA+GGG | - | chr2_2:16670479-16670498 | None:intergenic | 35.0% | |
| CTAGTTGAACCAAATTCAAC+CGG | + | chr2_2:16670722-16670741 | Msa0241220:intron | 35.0% | |
| TTGGTTGTGGCATTAATGTT+AGG | + | chr2_2:16670889-16670908 | Msa0241220:intron | 35.0% | |
| TTGTGGCATTAATGTTAGGA+TGG | + | chr2_2:16670893-16670912 | Msa0241220:intron | 35.0% | |
| TGTGGCATTAATGTTAGGAT+GGG | + | chr2_2:16670894-16670913 | Msa0241220:intron | 35.0% | |
| TGCAACTCAATCCCAAAATA+TGG | + | chr2_2:16670926-16670945 | Msa0241220:CDS | 35.0% | |
| TCAATCCCAAAATATGGAAC+TGG | + | chr2_2:16670932-16670951 | Msa0241220:CDS | 35.0% | |
| ! | CCATTCCAGTTCCATATTTT+GGG | - | chr2_2:16670940-16670959 | None:intergenic | 35.0% |
| ! | TCCATTCCAGTTCCATATTT+TGG | - | chr2_2:16670941-16670960 | None:intergenic | 35.0% |
| !! | AATGAGAAAGGGTATCTTGT+AGG | + | chr2_2:16670968-16670987 | Msa0241220:CDS | 35.0% |
| TCTTGATAGAACCTGGTTTA+GGG | - | chr2_2:16671009-16671028 | None:intergenic | 35.0% | |
| ATCTTGATAGAACCTGGTTT+AGG | - | chr2_2:16671010-16671029 | None:intergenic | 35.0% | |
| ATAGAAATGTCCCATTACAC+CGG | - | chr2_2:16671089-16671108 | None:intergenic | 35.0% | |
| CTCAAGATTGGATGCTTTCA+TGG | + | chr2_2:16669404-16669423 | Msa0241220:CDS | 40.0% | |
| !! | CTGTTGGTAGCTAATAAGCA+TGG | - | chr2_2:16669463-16669482 | None:intergenic | 40.0% |
| TTGAGTGCAATATGACCCTT+TGG | - | chr2_2:16669586-16669605 | None:intergenic | 40.0% | |
| ATTTCTACTCCATAAGGGTC+AGG | - | chr2_2:16669832-16669851 | None:intergenic | 40.0% | |
| GACCCTTATGGAGTAGAAAT+TGG | + | chr2_2:16669832-16669851 | Msa0241220:CDS | 40.0% | |
| GTCCATGCAATTGATACAAG+GGG | + | chr2_2:16669904-16669923 | Msa0241220:CDS | 40.0% | |
| GGTCAATGTAGATTGAGGAA+AGG | + | chr2_2:16670051-16670070 | Msa0241220:CDS | 40.0% | |
| ! | GGTTGATTGGGATGATTTTG+TGG | + | chr2_2:16670122-16670141 | Msa0241220:CDS | 40.0% |
| ACAAGTGTCCCAATAAAAGC+TGG | + | chr2_2:16670400-16670419 | Msa0241220:CDS | 40.0% | |
| GCGATTAGATCAACCCTATA+TGG | + | chr2_2:16670463-16670482 | Msa0241220:CDS | 40.0% | |
| TAGATCAACCCTATATGGAC+AGG | + | chr2_2:16670468-16670487 | Msa0241220:CDS | 40.0% | |
| CATGACATACCTGTCCATAT+AGG | - | chr2_2:16670480-16670499 | None:intergenic | 40.0% | |
| TTATGTGTGATTCATGCGAC+TGG | - | chr2_2:16670543-16670562 | None:intergenic | 40.0% | |
| AAACCAATGGACGAATTGGT+CGG | - | chr2_2:16670682-16670701 | None:intergenic | 40.0% | |
| GATCAAACCAATGGACGAAT+TGG | - | chr2_2:16670686-16670705 | None:intergenic | 40.0% | |
| GCATTAATGTTAGGATGGGA+GGG | + | chr2_2:16670898-16670917 | Msa0241220:intron | 40.0% | |
| CCCAAAATATGGAACTGGAA+TGG | + | chr2_2:16670937-16670956 | Msa0241220:CDS | 40.0% | |
| ATGGAAGCAGGAAATGAGAA+AGG | + | chr2_2:16670956-16670975 | Msa0241220:CDS | 40.0% | |
| TGGAAGCAGGAAATGAGAAA+GGG | + | chr2_2:16670957-16670976 | Msa0241220:CDS | 40.0% | |
| AACAACAGCATAATGCACAC+CGG | + | chr2_2:16671067-16671086 | Msa0241220:CDS | 40.0% | |
| ATAATGCACACCGGTGTAAT+GGG | + | chr2_2:16671076-16671095 | Msa0241220:CDS | 40.0% | |
| ! | GGGACATTTCTATTTCTTGG+TGG | + | chr2_2:16671096-16671115 | Msa0241220:CDS | 40.0% |
| CTCAAGATTGGATGCTTTCA+TGG | + | chr2_2:16669404-16669423 | Msa0241220:CDS | 40.0% | |
| !! | CTGTTGGTAGCTAATAAGCA+TGG | - | chr2_2:16669463-16669482 | None:intergenic | 40.0% |
| TTGAGTGCAATATGACCCTT+TGG | - | chr2_2:16669586-16669605 | None:intergenic | 40.0% | |
| ATTTCTACTCCATAAGGGTC+AGG | - | chr2_2:16669832-16669851 | None:intergenic | 40.0% | |
| GACCCTTATGGAGTAGAAAT+TGG | + | chr2_2:16669832-16669851 | Msa0241220:CDS | 40.0% | |
| GTCCATGCAATTGATACAAG+GGG | + | chr2_2:16669904-16669923 | Msa0241220:CDS | 40.0% | |
| GGTCAATGTAGATTGAGGAA+AGG | + | chr2_2:16670051-16670070 | Msa0241220:CDS | 40.0% | |
| ! | GGTTGATTGGGATGATTTTG+TGG | + | chr2_2:16670122-16670141 | Msa0241220:CDS | 40.0% |
| ACAAGTGTCCCAATAAAAGC+TGG | + | chr2_2:16670400-16670419 | Msa0241220:CDS | 40.0% | |
| GCGATTAGATCAACCCTATA+TGG | + | chr2_2:16670463-16670482 | Msa0241220:CDS | 40.0% | |
| TAGATCAACCCTATATGGAC+AGG | + | chr2_2:16670468-16670487 | Msa0241220:CDS | 40.0% | |
| CATGACATACCTGTCCATAT+AGG | - | chr2_2:16670480-16670499 | None:intergenic | 40.0% | |
| TTATGTGTGATTCATGCGAC+TGG | - | chr2_2:16670543-16670562 | None:intergenic | 40.0% | |
| AAACCAATGGACGAATTGGT+CGG | - | chr2_2:16670682-16670701 | None:intergenic | 40.0% | |
| GATCAAACCAATGGACGAAT+TGG | - | chr2_2:16670686-16670705 | None:intergenic | 40.0% | |
| GCATTAATGTTAGGATGGGA+GGG | + | chr2_2:16670898-16670917 | Msa0241220:intron | 40.0% | |
| CCCAAAATATGGAACTGGAA+TGG | + | chr2_2:16670937-16670956 | Msa0241220:CDS | 40.0% | |
| ATGGAAGCAGGAAATGAGAA+AGG | + | chr2_2:16670956-16670975 | Msa0241220:CDS | 40.0% | |
| TGGAAGCAGGAAATGAGAAA+GGG | + | chr2_2:16670957-16670976 | Msa0241220:CDS | 40.0% | |
| AACAACAGCATAATGCACAC+CGG | + | chr2_2:16671067-16671086 | Msa0241220:CDS | 40.0% | |
| ATAATGCACACCGGTGTAAT+GGG | + | chr2_2:16671076-16671095 | Msa0241220:CDS | 40.0% | |
| ! | GGGACATTTCTATTTCTTGG+TGG | + | chr2_2:16671096-16671115 | Msa0241220:CDS | 40.0% |
| GGCAATCTTAGTGCTAGTGT+TGG | + | chr2_2:16669426-16669445 | Msa0241220:CDS | 45.0% | |
| CTTGGACAATACTATGGCCT+TGG | + | chr2_2:16669775-16669794 | Msa0241220:CDS | 45.0% | |
| CACCCCTTGTATCAATTGCA+TGG | - | chr2_2:16669909-16669928 | None:intergenic | 45.0% | |
| TGCAATTGATACAAGGGGTG+TGG | + | chr2_2:16669909-16669928 | Msa0241220:CDS | 45.0% | |
| ! | AAGGGGTGTGGAAGATAGAA+TGG | + | chr2_2:16669921-16669940 | Msa0241220:CDS | 45.0% |
| ! | AGGGGTGTGGAAGATAGAAT+GGG | + | chr2_2:16669922-16669941 | Msa0241220:CDS | 45.0% |
| AAACGTTGCACCAAAAGCCA+TGG | + | chr2_2:16670346-16670365 | Msa0241220:CDS | 45.0% | |
| AACGTTGCACCAAAAGCCAT+GGG | + | chr2_2:16670347-16670366 | Msa0241220:CDS | 45.0% | |
| ! | ACTACCATTCCCATGGCTTT+TGG | - | chr2_2:16670359-16670378 | None:intergenic | 45.0% |
| AAAAGCCATGGGAATGGTAG+TGG | + | chr2_2:16670358-16670377 | Msa0241220:CDS | 45.0% | |
| AGTGTCCCAATAAAAGCTGG+TGG | + | chr2_2:16670403-16670422 | Msa0241220:CDS | 45.0% | |
| !! | AGTGCTGGTCATCAACATGT+AGG | + | chr2_2:16670439-16670458 | Msa0241220:CDS | 45.0% |
| ATCGAACCAAGTACCAACCA+CGG | - | chr2_2:16670752-16670771 | None:intergenic | 45.0% | |
| GGCATTAATGTTAGGATGGG+AGG | + | chr2_2:16670897-16670916 | Msa0241220:intron | 45.0% | |
| TATGGAACTGGAATGGAAGC+AGG | + | chr2_2:16670944-16670963 | Msa0241220:CDS | 45.0% | |
| !! | TCAACTTGCTACCCTAAACC+AGG | + | chr2_2:16670995-16671014 | Msa0241220:CDS | 45.0% |
| CATAATGCACACCGGTGTAA+TGG | + | chr2_2:16671075-16671094 | Msa0241220:CDS | 45.0% | |
| GGCAATCTTAGTGCTAGTGT+TGG | + | chr2_2:16669426-16669445 | Msa0241220:CDS | 45.0% | |
| CTTGGACAATACTATGGCCT+TGG | + | chr2_2:16669775-16669794 | Msa0241220:CDS | 45.0% | |
| CACCCCTTGTATCAATTGCA+TGG | - | chr2_2:16669909-16669928 | None:intergenic | 45.0% | |
| TGCAATTGATACAAGGGGTG+TGG | + | chr2_2:16669909-16669928 | Msa0241220:CDS | 45.0% | |
| ! | AAGGGGTGTGGAAGATAGAA+TGG | + | chr2_2:16669921-16669940 | Msa0241220:CDS | 45.0% |
| ! | AGGGGTGTGGAAGATAGAAT+GGG | + | chr2_2:16669922-16669941 | Msa0241220:CDS | 45.0% |
| AAACGTTGCACCAAAAGCCA+TGG | + | chr2_2:16670346-16670365 | Msa0241220:CDS | 45.0% | |
| AACGTTGCACCAAAAGCCAT+GGG | + | chr2_2:16670347-16670366 | Msa0241220:CDS | 45.0% | |
| ! | ACTACCATTCCCATGGCTTT+TGG | - | chr2_2:16670359-16670378 | None:intergenic | 45.0% |
| AAAAGCCATGGGAATGGTAG+TGG | + | chr2_2:16670358-16670377 | Msa0241220:CDS | 45.0% | |
| AGTGTCCCAATAAAAGCTGG+TGG | + | chr2_2:16670403-16670422 | Msa0241220:CDS | 45.0% | |
| !! | AGTGCTGGTCATCAACATGT+AGG | + | chr2_2:16670439-16670458 | Msa0241220:CDS | 45.0% |
| ATCGAACCAAGTACCAACCA+CGG | - | chr2_2:16670752-16670771 | None:intergenic | 45.0% | |
| GGCATTAATGTTAGGATGGG+AGG | + | chr2_2:16670897-16670916 | Msa0241220:intron | 45.0% | |
| TATGGAACTGGAATGGAAGC+AGG | + | chr2_2:16670944-16670963 | Msa0241220:CDS | 45.0% | |
| !! | TCAACTTGCTACCCTAAACC+AGG | + | chr2_2:16670995-16671014 | Msa0241220:CDS | 45.0% |
| CATAATGCACACCGGTGTAA+TGG | + | chr2_2:16671075-16671094 | Msa0241220:CDS | 45.0% | |
| ! | TGCCTCTAGTTTCAGCTCCA+AGG | - | chr2_2:16669795-16669814 | None:intergenic | 50.0% |
| GGGGTGTGGAAGATAGAATG+GGG | + | chr2_2:16669923-16669942 | Msa0241220:CDS | 50.0% | |
| TGCACCAAAAGCCATGGGAA+TGG | + | chr2_2:16670352-16670371 | Msa0241220:CDS | 50.0% | |
| CACAACCACTACCATTCCCA+TGG | - | chr2_2:16670366-16670385 | None:intergenic | 50.0% | |
| ! | CACGGAACACCGGTTGAATT+TGG | - | chr2_2:16670734-16670753 | None:intergenic | 50.0% |
| CAAATTCAACCGGTGTTCCG+TGG | + | chr2_2:16670732-16670751 | Msa0241220:intron | 50.0% | |
| AAGTACCAACCACGGAACAC+CGG | - | chr2_2:16670744-16670763 | None:intergenic | 50.0% | |
| ! | TGCCTCTAGTTTCAGCTCCA+AGG | - | chr2_2:16669795-16669814 | None:intergenic | 50.0% |
| GGGGTGTGGAAGATAGAATG+GGG | + | chr2_2:16669923-16669942 | Msa0241220:CDS | 50.0% | |
| TGCACCAAAAGCCATGGGAA+TGG | + | chr2_2:16670352-16670371 | Msa0241220:CDS | 50.0% | |
| CACAACCACTACCATTCCCA+TGG | - | chr2_2:16670366-16670385 | None:intergenic | 50.0% | |
| ! | CACGGAACACCGGTTGAATT+TGG | - | chr2_2:16670734-16670753 | None:intergenic | 50.0% |
| CAAATTCAACCGGTGTTCCG+TGG | + | chr2_2:16670732-16670751 | Msa0241220:intron | 50.0% | |
| AAGTACCAACCACGGAACAC+CGG | - | chr2_2:16670744-16670763 | None:intergenic | 50.0% | |
| GGCCTTGGAGCTGAAACTAG+AGG | + | chr2_2:16669790-16669809 | Msa0241220:CDS | 55.0% | |
| GAGCCGACCAATTCGTCCAT+TGG | + | chr2_2:16670676-16670695 | Msa0241220:intron | 55.0% | |
| TTCAACCGGTGTTCCGTGGT+TGG | + | chr2_2:16670736-16670755 | Msa0241220:intron | 55.0% | |
| ! | GGTGTTCCGTGGTTGGTACT+TGG | + | chr2_2:16670743-16670762 | Msa0241220:intron | 55.0% |
| GGCCTTGGAGCTGAAACTAG+AGG | + | chr2_2:16669790-16669809 | Msa0241220:CDS | 55.0% | |
| GAGCCGACCAATTCGTCCAT+TGG | + | chr2_2:16670676-16670695 | Msa0241220:intron | 55.0% | |
| TTCAACCGGTGTTCCGTGGT+TGG | + | chr2_2:16670736-16670755 | Msa0241220:intron | 55.0% | |
| ! | GGTGTTCCGTGGTTGGTACT+TGG | + | chr2_2:16670743-16670762 | Msa0241220:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 16669391 | 16671147 | 16669391 | ID=Msa0241220;Name=Msa0241220 |
| chr2_2 | mRNA | 16669391 | 16671147 | 16669391 | ID=Msa0241220-mRNA-1;Parent=Msa0241220;Name=Msa0241220-mRNA-1;_AED=0.21;_eAED=0.21;_QI=0|0|0|1|1|1|3|0|412 |
| chr2_2 | exon | 16669391 | 16670233 | 16669391 | ID=Msa0241220-mRNA-1:exon:6852;Parent=Msa0241220-mRNA-1 |
| chr2_2 | exon | 16670331 | 16670489 | 16670331 | ID=Msa0241220-mRNA-1:exon:6853;Parent=Msa0241220-mRNA-1 |
| chr2_2 | exon | 16670911 | 16671147 | 16670911 | ID=Msa0241220-mRNA-1:exon:6854;Parent=Msa0241220-mRNA-1 |
| chr2_2 | CDS | 16669391 | 16670233 | 16669391 | ID=Msa0241220-mRNA-1:cds;Parent=Msa0241220-mRNA-1 |
| chr2_2 | CDS | 16670331 | 16670489 | 16670331 | ID=Msa0241220-mRNA-1:cds;Parent=Msa0241220-mRNA-1 |
| chr2_2 | CDS | 16670911 | 16671147 | 16670911 | ID=Msa0241220-mRNA-1:cds;Parent=Msa0241220-mRNA-1 |
| Gene Sequence |
| Protein sequence |
