Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1339530 | XP_003591771.1 | 83.721 | 387 | 45 | 1 | 1 | 369 | 1 | 387 | 0.0 | 652 |
| Msa1339530 | XP_003591771.1 | 89.819 | 442 | 15 | 1 | 385 | 796 | 1 | 442 | 0.0 | 794 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1339530 | sp|Q8CIA9|MF14B_MOUSE | 27.273 | 330 | 200 | 8 | 55 | 360 | 83 | 396 | 1.44e-22 | 105 |
| Msa1339530 | sp|Q8CIA9|MF14B_MOUSE | 25.556 | 360 | 238 | 8 | 439 | 785 | 83 | 425 | 2.17e-21 | 102 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1339530 | G7I364 | 83.721 | 387 | 45 | 1 | 1 | 369 | 1 | 387 | 0.0 | 652 |
| Msa1339530 | G7I364 | 89.819 | 442 | 15 | 1 | 385 | 796 | 1 | 442 | 0.0 | 794 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004940 | Msa1339530 | 0.806814 | 6.851351e-50 | -8.615850e-47 |
| Msa0017710 | Msa1339530 | 0.817217 | 3.697623e-52 | -8.615850e-47 |
| Msa0024650 | Msa1339530 | 0.830886 | 2.280560e-55 | -8.615850e-47 |
| Msa0036260 | Msa1339530 | 0.922877 | 5.549224e-89 | -8.615850e-47 |
| Msa0036550 | Msa1339530 | 0.801292 | 9.646550e-49 | -8.615850e-47 |
| Msa0038010 | Msa1339530 | 0.815153 | 1.069709e-51 | -8.615850e-47 |
| Msa0047560 | Msa1339530 | -0.821946 | 3.080997e-53 | -8.615850e-47 |
| Msa0050310 | Msa1339530 | -0.802012 | 6.866562e-49 | -8.615850e-47 |
| Msa0053360 | Msa1339530 | -0.812241 | 4.680899e-51 | -8.615850e-47 |
| Msa0060410 | Msa1339530 | 0.811765 | 5.942905e-51 | -8.615850e-47 |
| Msa0073110 | Msa1339530 | 0.801441 | 8.990393e-49 | -8.615850e-47 |
| Msa0078160 | Msa1339530 | -0.802618 | 5.151821e-49 | -8.615850e-47 |
| Msa0084190 | Msa1339530 | 0.904083 | 1.776224e-79 | -8.615850e-47 |
| Msa0098380 | Msa1339530 | 0.803668 | 3.123220e-49 | -8.615850e-47 |
| Msa0606600 | Msa1339530 | 0.805373 | 1.377358e-49 | -8.615850e-47 |
| Msa0614960 | Msa1339530 | 0.806297 | 8.808701e-50 | -8.615850e-47 |
| Msa0622800 | Msa1339530 | -0.803591 | 3.240696e-49 | -8.615850e-47 |
| Msa0622890 | Msa1339530 | 0.819405 | 1.181592e-52 | -8.615850e-47 |
| Msa0626980 | Msa1339530 | 0.812685 | 3.743957e-51 | -8.615850e-47 |
| Msa0627360 | Msa1339530 | 0.813412 | 2.593507e-51 | -8.615850e-47 |
| Msa0638300 | Msa1339530 | -0.809645 | 1.707881e-50 | -8.615850e-47 |
| Msa0641700 | Msa1339530 | 0.803820 | 2.903834e-49 | -8.615850e-47 |
| Msa0644890 | Msa1339530 | -0.802931 | 4.438222e-49 | -8.615850e-47 |
| Msa0647300 | Msa1339530 | 0.800447 | 1.434937e-48 | -8.615850e-47 |
| Msa0651090 | Msa1339530 | 0.805797 | 1.122354e-49 | -8.615850e-47 |
| Msa0654500 | Msa1339530 | -0.800534 | 1.377818e-48 | -8.615850e-47 |
| Msa0659230 | Msa1339530 | 0.813980 | 1.944898e-51 | -8.615850e-47 |
| Msa0673940 | Msa1339530 | 0.806756 | 7.049087e-50 | -8.615850e-47 |
| Msa0680460 | Msa1339530 | 0.820592 | 6.323666e-53 | -8.615850e-47 |
| Msa0685390 | Msa1339530 | -0.843846 | 1.090137e-58 | -8.615850e-47 |
| Msa0686830 | Msa1339530 | 0.814545 | 1.458774e-51 | -8.615850e-47 |
| Msa0689840 | Msa1339530 | 0.826258 | 2.994299e-54 | -8.615850e-47 |
| Msa0699170 | Msa1339530 | 0.806916 | 6.518728e-50 | -8.615850e-47 |
| Msa0708680 | Msa1339530 | 0.804556 | 2.041482e-49 | -8.615850e-47 |
| Msa0709790 | Msa1339530 | 0.811086 | 8.348556e-51 | -8.615850e-47 |
| Msa0711230 | Msa1339530 | 0.855767 | 5.057061e-62 | -8.615850e-47 |
| Msa0711240 | Msa1339530 | 0.812442 | 4.231372e-51 | -8.615850e-47 |
| Msa0714230 | Msa1339530 | -0.804646 | 1.954837e-49 | -8.615850e-47 |
| Msa0717030 | Msa1339530 | 0.802568 | 5.275489e-49 | -8.615850e-47 |
| Msa0720810 | Msa1339530 | 0.803115 | 4.066674e-49 | -8.615850e-47 |
| Msa0730890 | Msa1339530 | 0.811030 | 8.581610e-51 | -8.615850e-47 |
| Msa0743370 | Msa1339530 | 0.844422 | 7.633619e-59 | -8.615850e-47 |
| Msa0750790 | Msa1339530 | 0.816929 | 4.292596e-52 | -8.615850e-47 |
| Msa0758990 | Msa1339530 | 0.814032 | 1.893794e-51 | -8.615850e-47 |
| Msa0761950 | Msa1339530 | 0.803510 | 3.368774e-49 | -8.615850e-47 |
| Msa0792410 | Msa1339530 | 0.818248 | 2.164335e-52 | -8.615850e-47 |
| Msa0800120 | Msa1339530 | 0.826725 | 2.317637e-54 | -8.615850e-47 |
| Msa0803880 | Msa1339530 | 0.815231 | 1.027834e-51 | -8.615850e-47 |
| Msa0807270 | Msa1339530 | 0.802081 | 6.644368e-49 | -8.615850e-47 |
| Msa0812610 | Msa1339530 | 0.830337 | 3.107755e-55 | -8.615850e-47 |
| Msa0812720 | Msa1339530 | 0.811589 | 6.491310e-51 | -8.615850e-47 |
| Msa0813840 | Msa1339530 | 0.827836 | 1.255582e-54 | -8.615850e-47 |
| Msa0814660 | Msa1339530 | 0.823935 | 1.059311e-53 | -8.615850e-47 |
| Msa0829250 | Msa1339530 | -0.810330 | 1.216087e-50 | -8.615850e-47 |
| Msa0838210 | Msa1339530 | 0.824330 | 8.557851e-54 | -8.615850e-47 |
| Msa0841930 | Msa1339530 | 0.816166 | 6.362816e-52 | -8.615850e-47 |
| Msa0130350 | Msa1339530 | 0.816799 | 4.590177e-52 | -8.615850e-47 |
| Msa0130360 | Msa1339530 | 0.902113 | 1.351083e-78 | -8.615850e-47 |
| Msa0132080 | Msa1339530 | -0.810835 | 9.458392e-51 | -8.615850e-47 |
| Msa0136090 | Msa1339530 | 0.833270 | 5.872579e-56 | -8.615850e-47 |
| Msa0143940 | Msa1339530 | 0.802307 | 5.970637e-49 | -8.615850e-47 |
| Msa0144010 | Msa1339530 | 0.805812 | 1.114191e-49 | -8.615850e-47 |
| Msa0163690 | Msa1339530 | 0.804614 | 1.985341e-49 | -8.615850e-47 |
| Msa0176600 | Msa1339530 | 0.802016 | 6.851382e-49 | -8.615850e-47 |
| Msa0188560 | Msa1339530 | 0.806960 | 6.382392e-50 | -8.615850e-47 |
| Msa0206370 | Msa1339530 | 0.821793 | 3.341771e-53 | -8.615850e-47 |
| Msa0212950 | Msa1339530 | -0.808891 | 2.477779e-50 | -8.615850e-47 |
| Msa0219810 | Msa1339530 | 0.810920 | 9.068116e-51 | -8.615850e-47 |
| Msa0224870 | Msa1339530 | 0.833687 | 4.620951e-56 | -8.615850e-47 |
| Msa0230920 | Msa1339530 | 0.822307 | 2.540272e-53 | -8.615850e-47 |
| Msa1231440 | Msa1339530 | 0.816471 | 5.436077e-52 | -8.615850e-47 |
| Msa1238250 | Msa1339530 | 0.801702 | 7.948748e-49 | -8.615850e-47 |
| Msa1241960 | Msa1339530 | 0.814482 | 1.506343e-51 | -8.615850e-47 |
| Msa1259570 | Msa1339530 | 0.828852 | 7.138959e-55 | -8.615850e-47 |
| Msa1263110 | Msa1339530 | 0.802120 | 6.522331e-49 | -8.615850e-47 |
| Msa1263370 | Msa1339530 | 0.800444 | 1.437393e-48 | -8.615850e-47 |
| Msa1263520 | Msa1339530 | 0.801632 | 8.216225e-49 | -8.615850e-47 |
| Msa1268360 | Msa1339530 | 0.824380 | 8.327245e-54 | -8.615850e-47 |
| Msa1269500 | Msa1339530 | 0.829800 | 4.203291e-55 | -8.615850e-47 |
| Msa1273320 | Msa1339530 | 0.833723 | 4.526945e-56 | -8.615850e-47 |
| Msa1277300 | Msa1339530 | 0.801052 | 1.080074e-48 | -8.615850e-47 |
| Msa1278000 | Msa1339530 | 0.809099 | 2.237201e-50 | -8.615850e-47 |
| Msa1281780 | Msa1339530 | 0.813630 | 2.322134e-51 | -8.615850e-47 |
| Msa1283070 | Msa1339530 | 0.800351 | 1.500897e-48 | -8.615850e-47 |
| Msa1284020 | Msa1339530 | 0.802304 | 5.979599e-49 | -8.615850e-47 |
| Msa1286860 | Msa1339530 | -0.812743 | 3.635247e-51 | -8.615850e-47 |
| Msa1290090 | Msa1339530 | -0.826629 | 2.442557e-54 | -8.615850e-47 |
| Msa1295210 | Msa1339530 | -0.826698 | 2.352218e-54 | -8.615850e-47 |
| Msa1297080 | Msa1339530 | 0.803805 | 2.925111e-49 | -8.615850e-47 |
| Msa1300570 | Msa1339530 | 0.801920 | 7.170625e-49 | -8.615850e-47 |
| Msa1302630 | Msa1339530 | 0.802155 | 6.414085e-49 | -8.615850e-47 |
| Msa1319190 | Msa1339530 | 0.802856 | 4.598701e-49 | -8.615850e-47 |
| Msa1320160 | Msa1339530 | 0.804437 | 2.161515e-49 | -8.615850e-47 |
| Msa1322380 | Msa1339530 | 0.806377 | 8.473095e-50 | -8.615850e-47 |
| Msa1334000 | Msa1339530 | 0.802878 | 4.552476e-49 | -8.615850e-47 |
| Msa1338510 | Msa1339530 | 0.825565 | 4.372901e-54 | -8.615850e-47 |
| Msa1339530 | Msa1357840 | 0.823475 | 1.357972e-53 | -8.615850e-47 |
| Msa1339530 | Msa1364690 | 0.828087 | 1.092173e-54 | -8.615850e-47 |
| Msa1339530 | Msa1377190 | 0.831262 | 1.844125e-55 | -8.615850e-47 |
| Msa1339530 | Msa1377460 | 0.817462 | 3.257019e-52 | -8.615850e-47 |
| Msa1339530 | Msa1384130 | 0.824023 | 1.010165e-53 | -8.615850e-47 |
| Msa1339530 | Msa1386180 | -0.803024 | 4.247350e-49 | -8.615850e-47 |
| Msa1339530 | Msa1387100 | -0.811487 | 6.830418e-51 | -8.615850e-47 |
| Msa1339530 | Msa1395720 | 0.801028 | 1.092437e-48 | -8.615850e-47 |
| Msa1339530 | Msa1407810 | 0.816234 | 6.143334e-52 | -8.615850e-47 |
| Msa1339530 | Msa1417220 | 0.821047 | 4.969135e-53 | -8.615850e-47 |
| Msa1339530 | Msa1422820 | -0.813861 | 2.065660e-51 | -8.615850e-47 |
| Msa1339530 | Msa1425810 | 0.810175 | 1.313612e-50 | -8.615850e-47 |
| Msa1339530 | Msa1437590 | 0.846919 | 1.604926e-59 | -8.615850e-47 |
| Msa1339530 | Msa1437780 | 0.815501 | 8.949253e-52 | -8.615850e-47 |
| Msa1339530 | Msa1462610 | 0.817403 | 3.358774e-52 | -8.615850e-47 |
| Msa0371350 | Msa1339530 | -0.805703 | 1.174752e-49 | -8.615850e-47 |
| Msa0401440 | Msa1339530 | 0.812210 | 4.754548e-51 | -8.615850e-47 |
| Msa0403740 | Msa1339530 | -0.804117 | 2.519293e-49 | -8.615850e-47 |
| Msa0409500 | Msa1339530 | 0.809609 | 1.738524e-50 | -8.615850e-47 |
| Msa0414480 | Msa1339530 | 0.804037 | 2.617918e-49 | -8.615850e-47 |
| Msa0419420 | Msa1339530 | -0.800593 | 1.340299e-48 | -8.615850e-47 |
| Msa0423630 | Msa1339530 | 0.800231 | 1.588308e-48 | -8.615850e-47 |
| Msa0427260 | Msa1339530 | -0.806601 | 7.598117e-50 | -8.615850e-47 |
| Msa0428720 | Msa1339530 | -0.801865 | 7.358784e-49 | -8.615850e-47 |
| Msa0433090 | Msa1339530 | 0.849287 | 3.563076e-60 | -8.615850e-47 |
| Msa0434910 | Msa1339530 | 0.809921 | 1.489717e-50 | -8.615850e-47 |
| Msa0443040 | Msa1339530 | 0.802413 | 5.676179e-49 | -8.615850e-47 |
| Msa0444210 | Msa1339530 | 0.809926 | 1.486341e-50 | -8.615850e-47 |
| Msa0459930 | Msa1339530 | 0.810770 | 9.771954e-51 | -8.615850e-47 |
| Msa0463820 | Msa1339530 | -0.803406 | 3.540418e-49 | -8.615850e-47 |
| Msa1019420 | Msa1339530 | 0.810715 | 1.004355e-50 | -8.615850e-47 |
| Msa1031060 | Msa1339530 | 0.818459 | 1.938615e-52 | -8.615850e-47 |
| Msa1035050 | Msa1339530 | 0.806512 | 7.936943e-50 | -8.615850e-47 |
| Msa1036590 | Msa1339530 | 0.813233 | 2.839260e-51 | -8.615850e-47 |
| Msa1048390 | Msa1339530 | 0.802576 | 5.255609e-49 | -8.615850e-47 |
| Msa1057940 | Msa1339530 | -0.804572 | 2.025787e-49 | -8.615850e-47 |
| Msa1075090 | Msa1339530 | 0.800669 | 1.292838e-48 | -8.615850e-47 |
| Msa1076900 | Msa1339530 | 0.816021 | 6.852609e-52 | -8.615850e-47 |
| Msa1078590 | Msa1339530 | -0.801785 | 7.643737e-49 | -8.615850e-47 |
| Msa1078760 | Msa1339530 | -0.801281 | 9.695836e-49 | -8.615850e-47 |
| Msa1085820 | Msa1339530 | 0.845640 | 3.580510e-59 | -8.615850e-47 |
| Msa1100330 | Msa1339530 | 0.838184 | 3.343078e-57 | -8.615850e-47 |
| Msa1104020 | Msa1339530 | -0.823982 | 1.033140e-53 | -8.615850e-47 |
| Msa0241220 | Msa1339530 | 0.808002 | 3.836017e-50 | -8.615850e-47 |
| Msa0245660 | Msa1339530 | 0.815015 | 1.147563e-51 | -8.615850e-47 |
| Msa0247780 | Msa1339530 | 0.828794 | 7.375584e-55 | -8.615850e-47 |
| Msa0248320 | Msa1339530 | 0.816730 | 4.757552e-52 | -8.615850e-47 |
| Msa0253230 | Msa1339530 | -0.813971 | 1.953832e-51 | -8.615850e-47 |
| Msa0277320 | Msa1339530 | 0.806328 | 8.675847e-50 | -8.615850e-47 |
| Msa0297270 | Msa1339530 | -0.803995 | 2.671777e-49 | -8.615850e-47 |
| Msa0303900 | Msa1339530 | 0.836833 | 7.422585e-57 | -8.615850e-47 |
| Msa0307630 | Msa1339530 | 0.815384 | 9.502064e-52 | -8.615850e-47 |
| Msa0325260 | Msa1339530 | 0.824371 | 8.369763e-54 | -8.615850e-47 |
| Msa0331070 | Msa1339530 | -0.807130 | 5.875258e-50 | -8.615850e-47 |
| Msa0333770 | Msa1339530 | 0.820975 | 5.162147e-53 | -8.615850e-47 |
| Msa0336430 | Msa1339530 | 0.808547 | 2.935894e-50 | -8.615850e-47 |
| Msa0336460 | Msa1339530 | 0.823823 | 1.125726e-53 | -8.615850e-47 |
| Msa0336520 | Msa1339530 | 0.807847 | 4.138213e-50 | -8.615850e-47 |
| Msa0336550 | Msa1339530 | -0.807032 | 6.161935e-50 | -8.615850e-47 |
| Msa0357510 | Msa1339530 | 0.803387 | 3.571494e-49 | -8.615850e-47 |
| Msa0357530 | Msa1339530 | 0.801652 | 8.140301e-49 | -8.615850e-47 |
| Msa0364030 | Msa1339530 | -0.802005 | 6.887569e-49 | -8.615850e-47 |
| Msa1107520 | Msa1339530 | 0.800636 | 1.313374e-48 | -8.615850e-47 |
| Msa1111910 | Msa1339530 | 0.810920 | 9.066359e-51 | -8.615850e-47 |
| Msa1112210 | Msa1339530 | -0.802223 | 6.210791e-49 | -8.615850e-47 |
| Msa1115900 | Msa1339530 | 0.817994 | 2.469766e-52 | -8.615850e-47 |
| Msa1119670 | Msa1339530 | 0.829045 | 6.410671e-55 | -8.615850e-47 |
| Msa1124220 | Msa1339530 | 0.831693 | 1.444286e-55 | -8.615850e-47 |
| Msa1127200 | Msa1339530 | 0.802874 | 4.561353e-49 | -8.615850e-47 |
| Msa1136630 | Msa1339530 | 0.811791 | 5.865916e-51 | -8.615850e-47 |
| Msa1162430 | Msa1339530 | 0.806862 | 6.691957e-50 | -8.615850e-47 |
| Msa1163710 | Msa1339530 | 0.801502 | 8.736216e-49 | -8.615850e-47 |
| Msa1187750 | Msa1339530 | 0.819393 | 1.189387e-52 | -8.615850e-47 |
| Msa1191270 | Msa1339530 | 0.811477 | 6.864542e-51 | -8.615850e-47 |
| Msa1191350 | Msa1339530 | 0.800414 | 1.457585e-48 | -8.615850e-47 |
| Msa1191530 | Msa1339530 | -0.821136 | 4.739137e-53 | -8.615850e-47 |
| Msa1194480 | Msa1339530 | -0.802700 | 4.954089e-49 | -8.615850e-47 |
| Msa1203650 | Msa1339530 | 0.808618 | 2.834938e-50 | -8.615850e-47 |
| Msa1204900 | Msa1339530 | -0.802241 | 6.160086e-49 | -8.615850e-47 |
| Msa1205120 | Msa1339530 | 0.831382 | 1.723151e-55 | -8.615850e-47 |
| Msa1211320 | Msa1339530 | 0.806065 | 9.857540e-50 | -8.615850e-47 |
| Msa1223540 | Msa1339530 | 0.801173 | 1.020128e-48 | -8.615850e-47 |
| Msa1223710 | Msa1339530 | 0.807689 | 4.471278e-50 | -8.615850e-47 |
| Msa0524710 | Msa1339530 | 0.846515 | 2.068981e-59 | -8.615850e-47 |
| Msa0530660 | Msa1339530 | 0.811772 | 5.921922e-51 | -8.615850e-47 |
| Msa0545680 | Msa1339530 | 0.814690 | 1.354690e-51 | -8.615850e-47 |
| Msa0559640 | Msa1339530 | -0.810212 | 1.289570e-50 | -8.615850e-47 |
| Msa0567330 | Msa1339530 | 0.807360 | 5.251949e-50 | -8.615850e-47 |
| Msa0567570 | Msa1339530 | 0.820358 | 7.156180e-53 | -8.615850e-47 |
| Msa0568920 | Msa1339530 | 0.838575 | 2.651498e-57 | -8.615850e-47 |
| Msa0576320 | Msa1339530 | 0.810381 | 1.185983e-50 | -8.615850e-47 |
| Msa0580890 | Msa1339530 | -0.801223 | 9.965534e-49 | -8.615850e-47 |
| Msa0587180 | Msa1339530 | 0.802652 | 5.067855e-49 | -8.615850e-47 |
| Msa0587730 | Msa1339530 | 0.813941 | 1.983824e-51 | -8.615850e-47 |
| Msa0587930 | Msa1339530 | 0.814722 | 1.332712e-51 | -8.615850e-47 |
| Msa0597820 | Msa1339530 | 0.811043 | 8.527537e-51 | -8.615850e-47 |
| Msa0846870 | Msa1339530 | 0.819468 | 1.143477e-52 | -8.615850e-47 |
| Msa0847140 | Msa1339530 | 0.853399 | 2.452529e-61 | -8.615850e-47 |
| Msa0853080 | Msa1339530 | 0.829719 | 4.398688e-55 | -8.615850e-47 |
| Msa0866260 | Msa1339530 | 0.809180 | 2.148846e-50 | -8.615850e-47 |
| Msa0866280 | Msa1339530 | 0.812551 | 4.004470e-51 | -8.615850e-47 |
| Msa0871420 | Msa1339530 | 0.834634 | 2.675265e-56 | -8.615850e-47 |
| Msa0890210 | Msa1339530 | 0.800282 | 1.550436e-48 | -8.615850e-47 |
| Msa0896920 | Msa1339530 | 0.820460 | 6.780377e-53 | -8.615850e-47 |
| Msa0904590 | Msa1339530 | 0.808451 | 3.077082e-50 | -8.615850e-47 |
| Msa0936630 | Msa1339530 | 0.828934 | 6.822284e-55 | -8.615850e-47 |
| Msa0941150 | Msa1339530 | -0.808520 | 2.975125e-50 | -8.615850e-47 |
| Msa0950090 | Msa1339530 | 0.813513 | 2.463636e-51 | -8.615850e-47 |
| Msa0962290 | Msa1339530 | 0.801920 | 7.170806e-49 | -8.615850e-47 |
| Msa0973080 | Msa1339530 | -0.805023 | 1.630311e-49 | -8.615850e-47 |
| Msa0973850 | Msa1339530 | 0.810745 | 9.892119e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1339530 | MtrunA17_Chr1g0198441 | 89.819 | 442 | 15 | 1 | 385 | 796 | 1 | 442 | 0.0 | 794 |
| Msa1339530 | MtrunA17_Chr1g0198441 | 83.721 | 387 | 45 | 1 | 1 | 369 | 1 | 387 | 0.0 | 652 |
| Msa1339530 | MtrunA17_Chr1g0198451 | 93.023 | 387 | 9 | 1 | 1 | 369 | 1 | 387 | 0.0 | 719 |
| Msa1339530 | MtrunA17_Chr1g0198451 | 80.769 | 442 | 54 | 2 | 385 | 796 | 1 | 441 | 0.0 | 711 |
| Msa1339530 | MtrunA17_Chr1g0211401 | 35.038 | 391 | 244 | 3 | 394 | 776 | 4 | 392 | 1.39e-72 | 244 |
| Msa1339530 | MtrunA17_Chr1g0211401 | 33.494 | 415 | 240 | 7 | 10 | 392 | 4 | 414 | 1.57e-66 | 228 |
| Msa1339530 | MtrunA17_Chr3g0143461 | 33.432 | 338 | 214 | 2 | 448 | 774 | 3 | 340 | 3.49e-59 | 206 |
| Msa1339530 | MtrunA17_Chr3g0143461 | 32.836 | 335 | 196 | 4 | 64 | 369 | 3 | 337 | 3.12e-52 | 186 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1339530 | AT5G42210.2 | 35.938 | 384 | 228 | 4 | 397 | 766 | 10 | 389 | 1.74e-75 | 251 |
| Msa1339530 | AT5G42210.2 | 34.204 | 383 | 224 | 3 | 13 | 367 | 10 | 392 | 4.13e-68 | 231 |
| Msa1339530 | AT5G42210.1 | 35.938 | 384 | 228 | 4 | 397 | 766 | 10 | 389 | 3.16e-75 | 251 |
| Msa1339530 | AT5G42210.1 | 34.115 | 384 | 225 | 3 | 13 | 368 | 10 | 393 | 8.33e-68 | 231 |
| Msa1339530 | AT2G16980.1 | 32.836 | 402 | 241 | 5 | 392 | 766 | 19 | 418 | 5.73e-62 | 215 |
| Msa1339530 | AT2G16980.1 | 32.203 | 413 | 217 | 5 | 8 | 367 | 19 | 421 | 1.81e-58 | 205 |
| Msa1339530 | AT2G16980.3 | 32.524 | 412 | 249 | 5 | 392 | 776 | 19 | 428 | 1.17e-61 | 216 |
| Msa1339530 | AT2G16980.3 | 32.048 | 415 | 219 | 5 | 8 | 369 | 19 | 423 | 4.33e-58 | 206 |
| Msa1339530 | AT2G16980.2 | 32.524 | 412 | 249 | 5 | 392 | 776 | 4 | 413 | 1.32e-61 | 215 |
| Msa1339530 | AT2G16980.2 | 32.048 | 415 | 219 | 5 | 8 | 369 | 4 | 408 | 3.94e-58 | 206 |
| Msa1339530 | AT2G16980.4 | 32.524 | 412 | 249 | 5 | 392 | 776 | 19 | 428 | 1.81e-61 | 215 |
| Msa1339530 | AT2G16980.4 | 32.048 | 415 | 219 | 5 | 8 | 369 | 19 | 423 | 5.26e-58 | 206 |
| Msa1339530 | AT2G16970.4 | 32.250 | 400 | 246 | 3 | 392 | 766 | 4 | 403 | 1.77e-60 | 210 |
| Msa1339530 | AT2G16970.4 | 31.514 | 403 | 233 | 5 | 8 | 367 | 4 | 406 | 1.54e-55 | 197 |
| Msa1339530 | AT2G16970.7 | 32.250 | 400 | 246 | 3 | 392 | 766 | 4 | 403 | 1.77e-60 | 210 |
| Msa1339530 | AT2G16970.7 | 31.514 | 403 | 233 | 5 | 8 | 367 | 4 | 406 | 1.54e-55 | 197 |
| Msa1339530 | AT2G16970.3 | 32.250 | 400 | 246 | 3 | 392 | 766 | 4 | 403 | 4.42e-60 | 210 |
| Msa1339530 | AT2G16970.3 | 31.436 | 404 | 234 | 5 | 8 | 368 | 4 | 407 | 2.73e-55 | 197 |
| Msa1339530 | AT2G16970.2 | 32.108 | 408 | 252 | 3 | 392 | 774 | 4 | 411 | 5.27e-60 | 211 |
| Msa1339530 | AT2G16970.2 | 31.358 | 405 | 235 | 5 | 8 | 369 | 4 | 408 | 3.50e-55 | 197 |
| Msa1339530 | AT2G16980.5 | 30.698 | 430 | 241 | 6 | 392 | 766 | 19 | 446 | 6.60e-57 | 202 |
| Msa1339530 | AT2G16980.5 | 30.159 | 441 | 217 | 6 | 8 | 367 | 19 | 449 | 1.50e-53 | 192 |
| Msa1339530 | AT2G16990.4 | 30.808 | 396 | 244 | 6 | 397 | 766 | 8 | 399 | 4.22e-56 | 198 |
| Msa1339530 | AT2G16990.4 | 28.463 | 397 | 244 | 3 | 13 | 369 | 8 | 404 | 1.50e-50 | 183 |
| Msa1339530 | AT2G16990.6 | 30.808 | 396 | 244 | 6 | 397 | 766 | 8 | 399 | 4.22e-56 | 198 |
| Msa1339530 | AT2G16990.6 | 28.463 | 397 | 244 | 3 | 13 | 369 | 8 | 404 | 1.50e-50 | 183 |
| Msa1339530 | AT2G16990.7 | 30.542 | 406 | 252 | 6 | 397 | 776 | 8 | 409 | 4.73e-56 | 199 |
| Msa1339530 | AT2G16990.7 | 28.392 | 398 | 245 | 3 | 13 | 370 | 8 | 405 | 2.70e-50 | 183 |
| Msa1339530 | AT2G16990.1 | 30.542 | 406 | 252 | 6 | 397 | 776 | 8 | 409 | 5.98e-56 | 199 |
| Msa1339530 | AT2G16990.1 | 28.392 | 398 | 245 | 3 | 13 | 370 | 8 | 405 | 3.93e-50 | 183 |
| Msa1339530 | AT2G16990.2 | 30.542 | 406 | 252 | 6 | 397 | 776 | 8 | 409 | 5.98e-56 | 199 |
| Msa1339530 | AT2G16990.2 | 28.392 | 398 | 245 | 3 | 13 | 370 | 8 | 405 | 3.93e-50 | 183 |
| Msa1339530 | AT2G16970.8 | 32.759 | 348 | 209 | 3 | 392 | 714 | 4 | 351 | 1.72e-53 | 190 |
| Msa1339530 | AT2G16970.8 | 31.594 | 345 | 211 | 3 | 8 | 327 | 4 | 348 | 2.20e-49 | 179 |
| Msa1339530 | AT2G16970.1 | 32.759 | 348 | 209 | 3 | 392 | 714 | 4 | 351 | 2.10e-53 | 190 |
| Msa1339530 | AT2G16970.1 | 31.594 | 345 | 211 | 3 | 8 | 327 | 4 | 348 | 2.81e-49 | 179 |
| Msa1339530 | AT2G16970.6 | 32.759 | 348 | 209 | 3 | 392 | 714 | 4 | 351 | 2.24e-53 | 190 |
| Msa1339530 | AT2G16970.6 | 31.594 | 345 | 211 | 3 | 8 | 327 | 4 | 348 | 2.94e-49 | 179 |
| Msa1339530 | AT2G16990.3 | 31.232 | 349 | 212 | 5 | 397 | 719 | 8 | 354 | 1.60e-47 | 174 |
| Msa1339530 | AT2G16990.3 | 28.783 | 337 | 218 | 2 | 13 | 327 | 8 | 344 | 2.20e-44 | 165 |
| Msa1339530 | AT2G16990.5 | 31.232 | 349 | 212 | 5 | 397 | 719 | 8 | 354 | 1.60e-47 | 174 |
| Msa1339530 | AT2G16990.5 | 28.783 | 337 | 218 | 2 | 13 | 327 | 8 | 344 | 2.20e-44 | 165 |
| Msa1339530 | AT2G16990.8 | 29.557 | 406 | 229 | 7 | 397 | 776 | 8 | 382 | 3.37e-46 | 171 |
| Msa1339530 | AT2G16990.8 | 27.387 | 398 | 222 | 4 | 13 | 370 | 8 | 378 | 1.01e-40 | 155 |
| Msa1339530 | AT2G16980.6 | 30.303 | 297 | 179 | 4 | 506 | 776 | 1 | 295 | 6.53e-33 | 130 |
| Msa1339530 | AT2G16980.6 | 30.667 | 300 | 146 | 4 | 122 | 369 | 1 | 290 | 3.60e-31 | 125 |
| Msa1339530 | AT2G16970.5 | 35.882 | 170 | 108 | 1 | 392 | 560 | 4 | 173 | 1.07e-27 | 115 |
| Msa1339530 | AT2G16970.5 | 34.706 | 170 | 110 | 1 | 8 | 176 | 4 | 173 | 1.17e-26 | 112 |
| Msa1339530 | AT2G16970.5 | 26.936 | 297 | 185 | 8 | 500 | 774 | 18 | 304 | 5.08e-18 | 87.0 |
| Msa1339530 | AT2G16970.5 | 35.338 | 133 | 68 | 2 | 255 | 369 | 169 | 301 | 2.75e-15 | 78.6 |
Find 141 sgRNAs with CRISPR-Local
Find 772 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGGTGTAGGCTTGGCTTTC+TGG | 0.046732 | tig0003352:-22649 | Msa1339530:intron |
| TTGGTGTAGGCTTGGCTTTC+TGG | 0.046732 | tig0003352:-28692 | Msa1339530:intron |
| TCCAAAGCCATTTACATTAA+TGG | 0.151907 | tig0003352:-30638 | Msa1339530:CDS |
| TTGAAGACCATTAATGTAAA+TGG | 0.184689 | tig0003352:+30631 | None:intergenic |
| TTTCTTTCCTTCTAGATTAC+TGG | 0.206606 | tig0003352:-24229 | Msa1339530:intron |
| TCTTCTGCTGCACATGTTAT+TGG | 0.211223 | tig0003352:-23654 | Msa1339530:CDS |
| GATGGTGGTACTTCCACTTT+TGG | 0.225106 | tig0003352:-24197 | Msa1339530:CDS |
| AACAAAAGGGCAGCAGTATT+TGG | 0.253401 | tig0003352:-29788 | Msa1339530:CDS |
| GCTGGGGCAAATTCAATATC+TGG | 0.260798 | tig0003352:-22104 | Msa1339530:CDS |
| GATGATGGTACTTCCAATAT+TGG | 0.263930 | tig0003352:-30502 | Msa1339530:CDS |
| ACTTGCTTGGAATCAATCTA+AGG | 0.285147 | tig0003352:-23907 | Msa1339530:CDS |
| GAAATTACCAAAAGGAAATA+TGG | 0.304389 | tig0003352:+30422 | None:intergenic |
| CTTCTGCTGCACATGTTATT+GGG | 0.316928 | tig0003352:-23653 | Msa1339530:CDS |
| ACCATTAATGTAAATGGCTT+TGG | 0.317187 | tig0003352:+30637 | None:intergenic |
| AGGTATTATACTGGTGGATA+TGG | 0.324040 | tig0003352:+24129 | None:intergenic |
| GCTTCCAATACTTAATCCTT+TGG | 0.325570 | tig0003352:-22796 | Msa1339530:CDS |
| TCTGAAAGCTGGCCCAATAT+TGG | 0.326045 | tig0003352:+30489 | None:intergenic |
| TCCACCACCATATTTCCTTT+TGG | 0.332298 | tig0003352:-30429 | Msa1339530:intron |
| GCCATTGATGTAAATAGCTT+TGG | 0.356157 | tig0003352:+24357 | None:intergenic |
| AGGAAGAATTGCATATAAAC+TGG | 0.362320 | tig0003352:+29549 | None:intergenic |
| CCATACTTAGGTGGCTCATT+TGG | 0.362701 | tig0003352:-22448 | Msa1339530:CDS |
| CCTAGTTGAAACTGTGAAAC+TGG | 0.363738 | tig0003352:-23432 | Msa1339530:CDS |
| GGAAGTAACAAGTGGAATAA+AGG | 0.370458 | tig0003352:+30752 | None:intergenic |
| TCCACCAGTATAATACCTTT+TGG | 0.371542 | tig0003352:-24124 | Msa1339530:intron |
| TACTTCCACTAAGCATTCAT+TGG | 0.375771 | tig0003352:-24456 | Msa1339530:CDS |
| TACTTCCACTAAGCATTCAT+TGG | 0.375771 | tig0003352:-30736 | Msa1339530:CDS |
| TTGTTGTAGCTTTACTTGCT+TGG | 0.379609 | tig0003352:-23920 | Msa1339530:intron |
| CCAAATGAGCCACCTAAGTA+TGG | 0.382983 | tig0003352:+22448 | None:intergenic |
| TTGGTGTAGCTTTACTTGCT+TGG | 0.383852 | tig0003352:-30016 | Msa1339530:intron |
| CCGCGGAAATAGTAATCTTC+AGG | 0.389670 | tig0003352:-23328 | Msa1339530:intron |
| CCGCGGAAATAGTAATCTTC+AGG | 0.389670 | tig0003352:-29425 | Msa1339530:intron |
| TTTCTGCTTCACATGTTGTT+GGG | 0.389841 | tig0003352:-29748 | Msa1339530:CDS |
| CTTCTGATGATGGTCGGAAT+TGG | 0.392333 | tig0003352:-22979 | Msa1339530:CDS |
| CTTCTGATGATGGTCGGAAT+TGG | 0.392333 | tig0003352:-29045 | Msa1339530:CDS |
| GCAGTATTTGGTTGGATCAC+TGG | 0.394856 | tig0003352:-29776 | Msa1339530:CDS |
| TCATCACTTGAACCAGTATC+AGG | 0.398176 | tig0003352:+17501 | None:intergenic |
| AAAGAGCAGCAGTATTTAGT+TGG | 0.403122 | tig0003352:-23689 | Msa1339530:CDS |
| TGGATTAGCATGGGCACCTT+GGG | 0.405021 | tig0003352:-22629 | Msa1339530:intron |
| TGGATTAGCATGGGCACCTT+GGG | 0.405021 | tig0003352:-28672 | Msa1339530:intron |
| GCTAAAACCTTTGCATTCAA+AGG | 0.425492 | tig0003352:+27655 | None:intergenic |
| GGAAGTAACAAGTGAAATAA+AGG | 0.430380 | tig0003352:+24472 | None:intergenic |
| CTGGATTAGCATGGGCACCT+TGG | 0.432018 | tig0003352:-22630 | Msa1339530:CDS |
| CTGGATTAGCATGGGCACCT+TGG | 0.432018 | tig0003352:-28673 | Msa1339530:CDS |
| CCTAACTCTCGGTTCTTTGT+GGG | 0.432521 | tig0003352:+29504 | None:intergenic |
| AATTCAGAAGCGGGTCTTGT+TGG | 0.432583 | tig0003352:+17463 | None:intergenic |
| ATGATGGTACTTCCAATATT+GGG | 0.434227 | tig0003352:-30501 | Msa1339530:CDS |
| GTCAAAGGACTCATTACAAT+TGG | 0.436941 | tig0003352:+27786 | None:intergenic |
| GCCTAACTCTCGGTTCTTTG+TGG | 0.438887 | tig0003352:+29503 | None:intergenic |
| TCCAAAGCTATTTACATCAA+TGG | 0.440133 | tig0003352:-24358 | Msa1339530:CDS |
| AATTGTGCGAAGCACGTAGT+AGG | 0.440369 | tig0003352:+29968 | None:intergenic |
| TGCATGCTAAATCCTGATAC+TGG | 0.440797 | tig0003352:-17513 | Msa1339530:CDS |
| AGCATCAAGCTCAACCAATC+AGG | 0.446005 | tig0003352:-22265 | Msa1339530:intron |
| AGCATCAAGCTCAACCAATC+AGG | 0.446005 | tig0003352:-28013 | Msa1339530:intron |
| ATTACCAAAAGGTATTATAC+TGG | 0.447589 | tig0003352:+24120 | None:intergenic |
| GCAATCCAATGAATGCTTAG+TGG | 0.451192 | tig0003352:+24451 | None:intergenic |
| GCAATCCAATGAATGCTTAG+TGG | 0.451192 | tig0003352:+30731 | None:intergenic |
| CCAATACTTAATCCTTTGGT+TGG | 0.453681 | tig0003352:-22792 | Msa1339530:CDS |
| CCCACAAAGAACCGAGAGTT+AGG | 0.454303 | tig0003352:-29504 | Msa1339530:CDS |
| ATGTTGTCAATGAAAACAAA+AGG | 0.465641 | tig0003352:-29802 | Msa1339530:CDS |
| CCAACCAAAGGATTAAGTAT+TGG | 0.467513 | tig0003352:+22792 | None:intergenic |
| ACAGGAAAGAACCAAGAGTT+AGG | 0.467535 | tig0003352:-23407 | Msa1339530:CDS |
| ATATGCTATTGATGCAAGTA+AGG | 0.470324 | tig0003352:+22746 | None:intergenic |
| ATATGCTATTGATGCAAGTA+AGG | 0.470324 | tig0003352:+28789 | None:intergenic |
| CTAAAACCTTTGCATTCAAA+GGG | 0.470696 | tig0003352:+27656 | None:intergenic |
| CCAACCAATGGATTGAGTAT+TGG | 0.471163 | tig0003352:+28835 | None:intergenic |
| CTTGGCTTTCTGGATTAGCA+TGG | 0.472037 | tig0003352:-22639 | Msa1339530:CDS |
| CTTGGCTTTCTGGATTAGCA+TGG | 0.472037 | tig0003352:-28682 | Msa1339530:CDS |
| ATGCATATAAAGTGGACAAA+AGG | 0.473052 | tig0003352:+23460 | None:intergenic |
| CCAGTTTCACAGTTTCAACT+AGG | 0.478479 | tig0003352:+23432 | None:intergenic |
| ACATGTTGTTGGGAACGTCT+TGG | 0.481757 | tig0003352:-29738 | Msa1339530:CDS |
| AAAAGGAAAACAAACCTGAT+TGG | 0.484080 | tig0003352:+22251 | None:intergenic |
| TTGAAAATTTACCAGCAAAA+CGG | 0.486254 | tig0003352:+29216 | None:intergenic |
| TAATACATACTGTTTGTTGA+AGG | 0.491556 | tig0003352:+24335 | None:intergenic |
| TGGAGCAAGATGATTGTTGA+GGG | 0.492964 | tig0003352:+24377 | None:intergenic |
| CCAATACTCAATCCATTGGT+TGG | 0.493522 | tig0003352:-28835 | Msa1339530:CDS |
| ACTTCCAATACTCAATCCAT+TGG | 0.494882 | tig0003352:-28839 | Msa1339530:CDS |
| AAATGTGCGAAGCACATAGT+AGG | 0.495737 | tig0003352:+23872 | None:intergenic |
| GACCATGTTCATCTGAAAGC+TGG | 0.496936 | tig0003352:+30478 | None:intergenic |
| GTTCTCAGAACTTCTGATGA+TGG | 0.496970 | tig0003352:-22989 | Msa1339530:CDS |
| TTGGCTTTCTGGATTAGCAT+GGG | 0.498516 | tig0003352:-22638 | Msa1339530:CDS |
| TTGGCTTTCTGGATTAGCAT+GGG | 0.498516 | tig0003352:-28681 | Msa1339530:CDS |
| ATTCTCAGAACTTCTGATGA+TGG | 0.499366 | tig0003352:-29055 | Msa1339530:CDS |
| CTGCATTTCTGTCGCGTATG+TGG | 0.504768 | tig0003352:-23820 | Msa1339530:intron |
| CTGCATCTCTGTCGCGTATG+TGG | 0.504768 | tig0003352:-29916 | Msa1339530:intron |
| ATCAGTTATAATTCAGAAGC+GGG | 0.507005 | tig0003352:+17454 | None:intergenic |
| CAGTCCTACATTAAGAGGCA+TGG | 0.507024 | tig0003352:-29284 | Msa1339530:CDS |
| AGGAAATATGGTGGTGGACA+TGG | 0.507063 | tig0003352:+30434 | None:intergenic |
| GCAGTATTTAGTTGGATCAC+TGG | 0.507206 | tig0003352:-23681 | Msa1339530:CDS |
| AAAAGGACAACAAACCTGAT+TGG | 0.509443 | tig0003352:+27999 | None:intergenic |
| AAAGGGCAGCAGTATTTGGT+TGG | 0.512553 | tig0003352:-29784 | Msa1339530:CDS |
| AGGAAGAAATGCATATAAAG+TGG | 0.514915 | tig0003352:+23452 | None:intergenic |
| TCTGAAAGCTGACCCAAAAG+TGG | 0.523725 | tig0003352:+24184 | None:intergenic |
| TTATTGGGAACGTCTTTGCT+CGG | 0.524226 | tig0003352:-23638 | Msa1339530:CDS |
| GAAACTGTGAAACTGGATAC+AGG | 0.524268 | tig0003352:-23425 | Msa1339530:CDS |
| ATCACTTTCTCTCCAACCAA+TGG | 0.535617 | tig0003352:+28823 | None:intergenic |
| TACTGGTGGATATGGTAAGA+AGG | 0.538200 | tig0003352:+24137 | None:intergenic |
| GACGAAGATACAAATCTATG+AGG | 0.550040 | tig0003352:-23355 | Msa1339530:CDS |
| ATTTCGTATATAATCAGTAA+AGG | 0.551876 | tig0003352:-29948 | Msa1339530:CDS |
| ACTATGCAGGTACCATACTT+AGG | 0.554423 | tig0003352:-22460 | Msa1339530:intron |
| TGTTGTCAATGAAAACAAAA+GGG | 0.564808 | tig0003352:-29801 | Msa1339530:CDS |
| AGAAACATGTCGTGGTGGAG+TGG | 0.565655 | tig0003352:-24511 | Msa1339530:CDS |
| AGAAACATGTCGTGGTGGAG+TGG | 0.565655 | tig0003352:-30791 | None:intergenic |
| ATCACTTTCTCTCCAACCAA+AGG | 0.567989 | tig0003352:+22780 | None:intergenic |
| TTGGAGCAAGATGATTGTTG+AGG | 0.568723 | tig0003352:+24376 | None:intergenic |
| GACATGGTAACAAGGAGTAA+AGG | 0.569010 | tig0003352:+30450 | None:intergenic |
| AGAGCCATGCCTCTTAATGT+AGG | 0.570142 | tig0003352:+29280 | None:intergenic |
| GGAGTGGATTCTTTGAGCTG+AGG | 0.571185 | tig0003352:-30775 | Msa1339530:CDS |
| TTCAAGTGATGATGACTTGG+AGG | 0.573020 | tig0003352:-17490 | Msa1339530:CDS |
| GTATTCTACTCACAAGTCAA+AGG | 0.577330 | tig0003352:+27771 | None:intergenic |
| CAGTCCTGCATTAAGAGGCG+TGG | 0.579001 | tig0003352:-23228 | Msa1339530:CDS |
| GATATGGTAAGAAGGAGTAG+AGG | 0.581219 | tig0003352:+24145 | None:intergenic |
| TTGGAGCAAGATGATTGTTG+AGG | 0.583697 | tig0003352:+30656 | None:intergenic |
| TCAGAACTTCTGATGATGGT+CGG | 0.583866 | tig0003352:-29051 | Msa1339530:CDS |
| GACGAAGATATAAATCTATG+AGG | 0.587114 | tig0003352:-29452 | Msa1339530:CDS |
| TACTCACAGCAGGTTTCTCA+AGG | 0.587481 | tig0003352:+22413 | None:intergenic |
| TCAGAACTTCTGATGATGGT+CGG | 0.592201 | tig0003352:-22985 | Msa1339530:CDS |
| ACTTGCTTGGAATCAATCTG+AGG | 0.592218 | tig0003352:-30003 | Msa1339530:CDS |
| CAGCAAAACACTGTGTATGC+CGG | 0.594917 | tig0003352:+23172 | None:intergenic |
| AGAGCCACGCCTCTTAATGC+AGG | 0.599418 | tig0003352:+23224 | None:intergenic |
| TAGTACAGAAGCCTAACTCT+TGG | 0.599829 | tig0003352:+23396 | None:intergenic |
| GATGCTCCCTTTGAATGCAA+AGG | 0.600708 | tig0003352:-27662 | Msa1339530:CDS |
| ACCAAAAGGAAATATGGTGG+TGG | 0.601761 | tig0003352:+30428 | None:intergenic |
| TAGAGCAGAAGCCTAACTCT+CGG | 0.608553 | tig0003352:+29493 | None:intergenic |
| ACCAAAAGGTATTATACTGG+TGG | 0.609503 | tig0003352:+24123 | None:intergenic |
| TGCTTAGTGGAAGTAACAAG+TGG | 0.613388 | tig0003352:+30744 | None:intergenic |
| TGGTGGTGGACATGGTAACA+AGG | 0.613830 | tig0003352:+30442 | None:intergenic |
| AATCAGTTATAATTCAGAAG+CGG | 0.622840 | tig0003352:+17453 | None:intergenic |
| TGGTTCAAGTGATGATGACT+TGG | 0.630019 | tig0003352:-17493 | Msa1339530:CDS |
| CCTGAAGATTACTATTTCCG+CGG | 0.635434 | tig0003352:+29425 | None:intergenic |
| CCTGAAGATTACTATTTCCG+CGG | 0.641877 | tig0003352:+23328 | None:intergenic |
| GGCCAGCTTTCAGATGAACA+TGG | 0.649059 | tig0003352:-30480 | Msa1339530:CDS |
| ATTACCAAAAGGAAATATGG+TGG | 0.656790 | tig0003352:+30425 | None:intergenic |
| ATCTCAGAAACATGTCGTGG+TGG | 0.661528 | tig0003352:-24516 | Msa1339530:intron |
| GGTCAGCTTTCAGATGAACA+CGG | 0.662882 | tig0003352:-24175 | Msa1339530:CDS |
| CTCATCTCAGAAACATGTCG+TGG | 0.663073 | tig0003352:-24519 | Msa1339530:intron |
| ATCTCAGAAACATGTCGTGG+TGG | 0.664928 | tig0003352:-30796 | None:intergenic |
| ATCATCTCAGAAACATGTCG+TGG | 0.665653 | tig0003352:-30799 | None:intergenic |
| ATGCAGGTACCATACTTAGG+TGG | 0.666948 | tig0003352:-22457 | Msa1339530:intron |
| TAAATCTATGAGGAATGCCG+CGG | 0.674285 | tig0003352:-29442 | Msa1339530:CDS |
| CAAATCTATGAGGAATGCCG+CGG | 0.682083 | tig0003352:-23345 | Msa1339530:CDS |
| TTGTTGAGGACATAAAGCAG+TGG | 0.744421 | tig0003352:+30670 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTCTTAATCTAATATAT+TGG | - | tig0003352:17843-17862 | Msa1339530:intron | 10.0% |
| !! | TGTAGATATATAATTAATTA+AGG | - | tig0003352:20872-20891 | Msa1339530:intron | 10.0% |
| !! | TATATATTCATATATATAGT+TGG | - | tig0003352:20942-20961 | Msa1339530:intron | 10.0% |
| !! | ATATATTCATATATATAGTT+GGG | - | tig0003352:20943-20962 | Msa1339530:intron | 10.0% |
| !!! | TTTTTTTTTTTTTTTGAACA+AGG | - | tig0003352:21244-21263 | Msa1339530:intron | 10.0% |
| !! | TGTATTTATCAAAATTATAT+TGG | + | tig0003352:22045-22064 | None:intergenic | 10.0% |
| !! | TAATAATAATATTTATCAGT+AGG | + | tig0003352:22314-22333 | None:intergenic | 10.0% |
| !!! | TTTATTGATTAAAATTTACA+TGG | - | tig0003352:22521-22540 | Msa1339530:intron | 10.0% |
| !!! | TTTTAAATACTTTTTTTAAG+GGG | - | tig0003352:22857-22876 | Msa1339530:intron | 10.0% |
| !! | TAATAATATATTACTAATGT+TGG | + | tig0003352:23949-23968 | None:intergenic | 10.0% |
| !!! | TAATTTTGTAATATGTATTT+AGG | + | tig0003352:26935-26954 | None:intergenic | 10.0% |
| !! | TTTATGAATAAAACAAATTA+AGG | - | tig0003352:26986-27005 | Msa1339530:intron | 10.0% |
| !! | CAAATAAAAGTTATAAATAT+TGG | - | tig0003352:27545-27564 | Msa1339530:intron | 10.0% |
| !! | AATAAAAGTTATAAATATTG+GGG | - | tig0003352:27547-27566 | Msa1339530:intron | 10.0% |
| !!! | TAAGTTATAATTCAATTTTT+AGG | + | tig0003352:27608-27627 | None:intergenic | 10.0% |
| !! | TAACTATTATTATATATTTG+TGG | + | tig0003352:28899-28918 | None:intergenic | 10.0% |
| !!! | TTTAAAATCAAACATATGAT+TGG | + | tig0003352:17942-17961 | None:intergenic | 15.0% |
| !! | AATTGTTAACATTATTACAT+AGG | - | tig0003352:18151-18170 | Msa1339530:intron | 15.0% |
| !!! | ATTTTGAATATAAAAACAGA+TGG | - | tig0003352:18368-18387 | Msa1339530:intron | 15.0% |
| !!! | TTATTTTTATACTTCTTGTT+AGG | - | tig0003352:18608-18627 | Msa1339530:intron | 15.0% |
| !! | GAATATAATACAAAAAAAAG+TGG | + | tig0003352:20017-20036 | None:intergenic | 15.0% |
| !!! | ATTTAATTTGTATACACTAT+CGG | + | tig0003352:20108-20127 | None:intergenic | 15.0% |
| !! | ATATAAGAAAAATAGAAAAG+TGG | - | tig0003352:20991-21010 | Msa1339530:intron | 15.0% |
| !!! | TTTTTTTTACATTTACAACA+AGG | + | tig0003352:21905-21924 | None:intergenic | 15.0% |
| !!! | ATAATTTTGATAAATACAGA+TGG | - | tig0003352:22047-22066 | Msa1339530:intron | 15.0% |
| !!! | ACTTTATTTATTTATCTTGA+GGG | + | tig0003352:22714-22733 | None:intergenic | 15.0% |
| !!! | AACTTTATTTATTTATCTTG+AGG | + | tig0003352:22715-22734 | None:intergenic | 15.0% |
| !! | TTGTTATATTCATATAACAA+CGG | + | tig0003352:22945-22964 | None:intergenic | 15.0% |
| !! | GTCAAAAAAAAATTATTTCA+AGG | + | tig0003352:23102-23121 | None:intergenic | 15.0% |
| !! | AATATATTATTAATGAGTTG+AGG | - | tig0003352:23957-23976 | Msa1339530:intron | 15.0% |
| !!! | TGAAAATTTTGACAATATTT+AGG | + | tig0003352:24994-25013 | None:intergenic | 15.0% |
| !! | AAATTATATGAAATGTTGTT+TGG | + | tig0003352:26059-26078 | None:intergenic | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+TGG | + | tig0003352:26357-26376 | None:intergenic | 15.0% |
| !!! | AAGAAAAGTGTATAAATAAA+GGG | + | tig0003352:26421-26440 | None:intergenic | 15.0% |
| !!! | TAAGAAAAGTGTATAAATAA+AGG | + | tig0003352:26422-26441 | None:intergenic | 15.0% |
| !! | ATCTTTAACTCTTTAATATA+TGG | + | tig0003352:27356-27375 | None:intergenic | 15.0% |
| !! | GTCCTTAAAAATAAAAATAT+TGG | - | tig0003352:29333-29352 | Msa1339530:intron | 15.0% |
| !!! | GTCCAATATTTTTATTTTTA+AGG | + | tig0003352:29338-29357 | None:intergenic | 15.0% |
| !! | AATTTATAGAATAGAAAAGA+TGG | + | tig0003352:29641-29660 | None:intergenic | 15.0% |
| !! | GAAAAATTGAAATTACCAAA+AGG | + | tig0003352:17829-17848 | None:intergenic | 20.0% |
| !!! | AGTATTGTACATTGATTTAA+TGG | + | tig0003352:18052-18071 | None:intergenic | 20.0% |
| !! | ATTTCGTATATAATCAGTAA+AGG | - | tig0003352:18292-18311 | Msa1339530:intron | 20.0% |
| !! | TAGGTTATGAATCTTAATTA+TGG | - | tig0003352:18627-18646 | Msa1339530:intron | 20.0% |
| !! | TGAAAAACATTACAGTATTT+AGG | + | tig0003352:18938-18957 | None:intergenic | 20.0% |
| !!! | TTCTTAATATATTTTGGTGT+AGG | - | tig0003352:19535-19554 | Msa1339530:intron | 20.0% |
| !! | GAGTAATTAATAGGTAAAAA+AGG | + | tig0003352:20261-20280 | None:intergenic | 20.0% |
| !!! | ATTTTGGATGAGTAATTAAT+AGG | + | tig0003352:20270-20289 | None:intergenic | 20.0% |
| !! | CATATGATACATTGTTAATT+TGG | + | tig0003352:20340-20359 | None:intergenic | 20.0% |
| !!! | TTTGCTTTCTCTAAATTTTA+TGG | - | tig0003352:20361-20380 | Msa1339530:intron | 20.0% |
| !! | AGCTTTCAAATTTAATGTAA+TGG | + | tig0003352:20516-20535 | None:intergenic | 20.0% |
| !! | ATCAATTGTACACATATATT+AGG | - | tig0003352:20837-20856 | Msa1339530:intron | 20.0% |
| !!! | TATTACATCGTAAACTTTTT+TGG | + | tig0003352:21336-21355 | None:intergenic | 20.0% |
| !! | TTACGATGTAATACAAATAA+AGG | - | tig0003352:21343-21362 | Msa1339530:intron | 20.0% |
| !!! | TTTGATCACTTTTTATAGTT+TGG | + | tig0003352:21628-21647 | None:intergenic | 20.0% |
| !! | AAATTCAAATTCTTTAAGCA+AGG | + | tig0003352:22007-22026 | None:intergenic | 20.0% |
| !! | TAACAAACGAGTATTAAAAA+AGG | - | tig0003352:22234-22253 | Msa1339530:intron | 20.0% |
| !! | AACAAACGAGTATTAAAAAA+GGG | - | tig0003352:22235-22254 | Msa1339530:intron | 20.0% |
| !! | TACAATACATAATATATGCA+AGG | - | tig0003352:22408-22427 | Msa1339530:intron | 20.0% |
| !! | TTTAACACACTTTCTTTAAT+CGG | + | tig0003352:22603-22622 | None:intergenic | 20.0% |
| !! | AAAAAATATGTGTTGAAATG+TGG | - | tig0003352:22620-22639 | Msa1339530:intron | 20.0% |
| !! | AAAAATATGTGTTGAAATGT+GGG | - | tig0003352:22621-22640 | Msa1339530:intron | 20.0% |
| !! | AAACTATTCACATCAAAATT+TGG | - | tig0003352:22649-22668 | Msa1339530:intron | 20.0% |
| !! | TTTATTTATTTATCTTGAGG+GGG | + | tig0003352:22712-22731 | None:intergenic | 20.0% |
| !!! | CTTTATTTATTTATCTTGAG+GGG | + | tig0003352:22713-22732 | None:intergenic | 20.0% |
| !! | ATTAAATTATTTCAAGGCAT+CGG | + | tig0003352:23124-23143 | None:intergenic | 20.0% |
| !! | ATAACTTATTTATATACGGT+TGG | + | tig0003352:23632-23651 | None:intergenic | 20.0% |
| !! | GGACATAACTTATTTATATA+CGG | + | tig0003352:23636-23655 | None:intergenic | 20.0% |
| !!! | CAAATACTAGTATGTTATTT+TGG | - | tig0003352:24177-24196 | Msa1339530:CDS | 20.0% |
| !! | GTAAATCAACATAAATGTTA+AGG | + | tig0003352:24246-24265 | None:intergenic | 20.0% |
| !!! | TTCATAATATATTTTGGTGT+AGG | - | tig0003352:25578-25597 | Msa1339530:intron | 20.0% |
| !! | TAAGCATGTAAATTTGTATA+AGG | + | tig0003352:19779-19798 | None:intergenic | 20.0% |
| !! | TACAAATTTACATGCTTATA+TGG | - | tig0003352:19781-19800 | Msa1339530:intron | 20.0% |
| !! | AAACTCAATAACTTTCATTA+TGG | + | tig0003352:25755-25774 | None:intergenic | 20.0% |
| !! | TAATGATGTTATCATATATG+AGG | + | tig0003352:25866-25885 | None:intergenic | 20.0% |
| !!! | ATTGATTCTAACTATAAAAG+TGG | + | tig0003352:25890-25909 | None:intergenic | 20.0% |
| !!! | ACTTTTATAGTTAGAATCAA+TGG | - | tig0003352:25889-25908 | Msa1339530:intron | 20.0% |
| !! | ACATGACAAGAAATATTTAA+TGG | + | tig0003352:25933-25952 | None:intergenic | 20.0% |
| !! | CTTTCAAAATTAGTGTAAAA+TGG | + | tig0003352:26231-26250 | None:intergenic | 20.0% |
| !!! | GACACTTTTTTTTAGAAAAT+GGG | + | tig0003352:26287-26306 | None:intergenic | 20.0% |
| !!! | TGAAATGAGTCATTTATTTT+GGG | + | tig0003352:26309-26328 | None:intergenic | 20.0% |
| !!! | TTGAAATGAGTCATTTATTT+TGG | + | tig0003352:26310-26329 | None:intergenic | 20.0% |
| !! | AAAGTGGAATATATTGTATT+GGG | + | tig0003352:26397-26416 | None:intergenic | 20.0% |
| !!! | AGAAAAGTGTATAAATAAAG+GGG | + | tig0003352:26420-26439 | None:intergenic | 20.0% |
| !! | GATATTCATTATGTCTTTAA+TGG | + | tig0003352:27271-27290 | None:intergenic | 20.0% |
| !!! | TAGGACATAATGTTTTTAAA+TGG | + | tig0003352:27589-27608 | None:intergenic | 20.0% |
| !!! | CTTAAAACATTGTTTCTAAA+AGG | - | tig0003352:27624-27643 | Msa1339530:intron | 20.0% |
| !! | GATTCCAAATTAAATGAAAT+TGG | - | tig0003352:28245-28264 | Msa1339530:intron | 20.0% |
| !! | ATTGCCAATTTCATTTAATT+TGG | + | tig0003352:28252-28271 | None:intergenic | 20.0% |
| !! | AACTTATGACAAATTTATCA+AGG | + | tig0003352:28410-28429 | None:intergenic | 20.0% |
| !! | TCTAATTACTTGTAAATGTA+GGG | + | tig0003352:28963-28982 | None:intergenic | 20.0% |
| !! | TTACTAATATCATCTGAATT+TGG | - | tig0003352:29232-29251 | Msa1339530:CDS | 20.0% |
| !!! | AAGGACTTTTATATATTTTC+TGG | + | tig0003352:29319-29338 | None:intergenic | 20.0% |
| !!! | TTTATCCTTTTTCTTCATTT+GGG | + | tig0003352:29798-29817 | None:intergenic | 20.0% |
| !!! | TTTTATCCTTTTTCTTCATT+TGG | + | tig0003352:29799-29818 | None:intergenic | 20.0% |
| !!! | CCACTAATTTATTTTTAGAT+TGG | + | tig0003352:30046-30065 | None:intergenic | 20.0% |
| !! | CCAATCTAAAAATAAATTAG+TGG | - | tig0003352:30043-30062 | Msa1339530:intron | 20.0% |
| !!! | TCATCTAATTGTTGTTTTTT+TGG | - | tig0003352:30616-30635 | Msa1339530:intron | 20.0% |
| ! | TTGAAGACCATTAATGTAAA+TGG | + | tig0003352:17612-17631 | None:intergenic | 25.0% |
| ! | GAAATTACCAAAAGGAAATA+TGG | + | tig0003352:17821-17840 | None:intergenic | 25.0% |
| !! | AAACGTTTTCAATGATCTAA+CGG | - | tig0003352:17979-17998 | Msa1339530:intron | 25.0% |
| ! | ATGTTGTCAATGAAAACAAA+AGG | - | tig0003352:18438-18457 | Msa1339530:intron | 25.0% |
| ! | TGTTGTCAATGAAAACAAAA+GGG | - | tig0003352:18439-18458 | Msa1339530:intron | 25.0% |
| !! | CTAATTTTACAGTTTCAACT+AGG | + | tig0003352:18714-18733 | None:intergenic | 25.0% |
| ! | TTGAAAATTTACCAGCAAAA+CGG | + | tig0003352:19027-19046 | None:intergenic | 25.0% |
| ! | ATTTGTCAAATAACACAACA+AGG | + | tig0003352:19079-19098 | None:intergenic | 25.0% |
| !!! | TACTATTTGAAAGCTGTTTT+TGG | - | tig0003352:19147-19166 | Msa1339530:intron | 25.0% |
| !! | TTTTGTGATTCTTCTCTATA+AGG | - | tig0003352:19323-19342 | Msa1339530:intron | 25.0% |
| !! | GCTCTCTTCTTAATATATTT+TGG | - | tig0003352:19529-19548 | Msa1339530:intron | 25.0% |
| !! | TTATCAATTTTACTTACCCA+AGG | + | tig0003352:19587-19606 | None:intergenic | 25.0% |
| ! | CTTGAATAAGAAGTTATAAC+AGG | - | tig0003352:19705-19724 | Msa1339530:intron | 25.0% |
| ! | AAGAAATTAATTGCAGTATC+AGG | + | tig0003352:20178-20197 | None:intergenic | 25.0% |
| !! | CTATTTGCTTGTATAGATTT+TGG | + | tig0003352:20286-20305 | None:intergenic | 25.0% |
| !! | ATACATTGTTAATTTGGTGA+GGG | + | tig0003352:20334-20353 | None:intergenic | 25.0% |
| !!! | ACTTTTTCAGATGATTTCTT+TGG | - | tig0003352:20724-20743 | Msa1339530:intron | 25.0% |
| ! | TCATTACTTGAAGGATTATT+AGG | + | tig0003352:20770-20789 | None:intergenic | 25.0% |
| ! | TTCATATATATAGTTGGGTA+TGG | - | tig0003352:20948-20967 | Msa1339530:intron | 25.0% |
| ! | TCATATATATAGTTGGGTAT+GGG | - | tig0003352:20949-20968 | Msa1339530:intron | 25.0% |
| ! | TTATAAAGAGTTTGAGAATG+GGG | + | tig0003352:21066-21085 | None:intergenic | 25.0% |
| ! | CTTATAAAGAGTTTGAGAAT+GGG | + | tig0003352:21067-21086 | None:intergenic | 25.0% |
| ! | ACTTATAAAGAGTTTGAGAA+TGG | + | tig0003352:21068-21087 | None:intergenic | 25.0% |
| ! | CGAAAATAAGTTTCATTTGA+GGG | + | tig0003352:21208-21227 | None:intergenic | 25.0% |
| ! | TCGAAAATAAGTTTCATTTG+AGG | + | tig0003352:21209-21228 | None:intergenic | 25.0% |
| !! | AAACATGCAAATTTTGCTTT+TGG | + | tig0003352:21445-21464 | None:intergenic | 25.0% |
| !! | TTTTTATAGTTTGGCCAATT+AGG | + | tig0003352:21619-21638 | None:intergenic | 25.0% |
| !! | TTCTTTTATCGAATCCTATT+TGG | + | tig0003352:21878-21897 | None:intergenic | 25.0% |
| ! | GTGAAATAGACTATCAAATA+AGG | + | tig0003352:21928-21947 | None:intergenic | 25.0% |
| ! | ATTTCACCAAAATTCCTAAT+TGG | - | tig0003352:21941-21960 | Msa1339530:intron | 25.0% |
| !! | GGACAAAAAAAATTCTGAAA+AGG | - | tig0003352:22256-22275 | Msa1339530:intron | 25.0% |
| ! | TGAAAAGGCTCTTATAATTA+AGG | - | tig0003352:22271-22290 | Msa1339530:CDS | 25.0% |
| !!! | GGATCTCATATAATTTTAGT+GGG | + | tig0003352:22549-22568 | None:intergenic | 25.0% |
| !! | TGGATCTCATATAATTTTAG+TGG | + | tig0003352:22550-22569 | None:intergenic | 25.0% |
| ! | TTAATCGGTTAAAATTCACA+TGG | + | tig0003352:22588-22607 | None:intergenic | 25.0% |
| ! | ATAAAGTTATCCTCAAGAAA+TGG | - | tig0003352:22727-22746 | Msa1339530:intron | 25.0% |
| ! | CTCGGAATTAAATTATTTCA+AGG | + | tig0003352:23130-23149 | None:intergenic | 25.0% |
| ! | CTTGAAATAATTTAATTCCG+AGG | - | tig0003352:23128-23147 | Msa1339530:intron | 25.0% |
| !! | GAAACACTTTTAAACACATT+TGG | - | tig0003352:23335-23354 | Msa1339530:CDS | 25.0% |
| !!! | TTTTTTCCAAATCTTGATTG+TGG | + | tig0003352:23384-23403 | None:intergenic | 25.0% |
| ! | ACAATCAAGATTTGGAAAAA+AGG | - | tig0003352:23383-23402 | Msa1339530:CDS | 25.0% |
| ! | ATGTCAATTTGTGTCAAATT+AGG | - | tig0003352:23468-23487 | Msa1339530:CDS | 25.0% |
| ! | TCATAAGATAAAGGATAAGA+AGG | + | tig0003352:23517-23536 | None:intergenic | 25.0% |
| ! | TTAGAGTGATCATAAGATAA+AGG | + | tig0003352:23526-23545 | None:intergenic | 25.0% |
| ! | TTATTTATATACGGTTGGAA+AGG | + | tig0003352:23627-23646 | None:intergenic | 25.0% |
| !! | TAATACATACTGTTTGTTGA+AGG | + | tig0003352:23908-23927 | None:intergenic | 25.0% |
| !!! | ATTACCAAAAGGTATTATAC+TGG | + | tig0003352:24123-24142 | None:intergenic | 25.0% |
| ! | GTGAAATTGTAATTACCAAA+AGG | + | tig0003352:24134-24153 | None:intergenic | 25.0% |
| ! | TGTGTATGTCTTATAATTTG+AGG | + | tig0003352:24159-24178 | None:intergenic | 25.0% |
| !!! | TTTTGGTTAATCTAATGTGT+TGG | - | tig0003352:24194-24213 | Msa1339530:CDS | 25.0% |
| !! | ATTTATACTTCCTCTCTTTT+AGG | - | tig0003352:24507-24526 | Msa1339530:CDS | 25.0% |
| !!! | TTTTTTCTATACTCACTGTT+TGG | - | tig0003352:24705-24724 | Msa1339530:intron | 25.0% |
| ! | TTGGTTATGATTCTTAATCA+TGG | - | tig0003352:24724-24743 | Msa1339530:intron | 25.0% |
| ! | GATTCTTAATCATGGTTTAT+TGG | - | tig0003352:24732-24751 | Msa1339530:intron | 25.0% |
| !! | TGTCTCTTTCTTTTATAAGT+TGG | - | tig0003352:25039-25058 | Msa1339530:intron | 25.0% |
| !! | GTCTCTTTCTTTTATAAGTT+GGG | - | tig0003352:25040-25059 | Msa1339530:intron | 25.0% |
| !!! | TACTATTTCAAAGCTGTTTT+TGG | - | tig0003352:25213-25232 | Msa1339530:intron | 25.0% |
| ! | ATATCATACAATCATCAGTA+TGG | + | tig0003352:25343-25362 | None:intergenic | 25.0% |
| !! | GCTCTCTTCATAATATATTT+TGG | - | tig0003352:25572-25591 | Msa1339530:intron | 25.0% |
| !! | TTATCAATTTTACTTACCCA+AGG | + | tig0003352:19587-19606 | None:intergenic | 25.0% |
| ! | AAATATTTAATGGCAATACC+AGG | + | tig0003352:25923-25942 | None:intergenic | 25.0% |
| ! | AATAGAATGAGACAAAGAAA+AGG | + | tig0003352:26009-26028 | None:intergenic | 25.0% |
| ! | TTGTTATGTAACTTCATTGT+AGG | - | tig0003352:26093-26112 | Msa1339530:intron | 25.0% |
| ! | TGTTATGTAACTTCATTGTA+GGG | - | tig0003352:26094-26113 | Msa1339530:intron | 25.0% |
| !!! | GGACACTTTTTTTTAGAAAA+TGG | + | tig0003352:26288-26307 | None:intergenic | 25.0% |
| ! | GAAAGTGGAATATATTGTAT+TGG | + | tig0003352:26398-26417 | None:intergenic | 25.0% |
| !!! | TCAACTTTGTTATTTACCAA+TGG | + | tig0003352:27090-27109 | None:intergenic | 25.0% |
| ! | ATTGAAATAGCTACAGAAAA+AGG | - | tig0003352:27117-27136 | Msa1339530:intron | 25.0% |
| ! | TGTCTTTAATGGAATGATTT+AGG | + | tig0003352:27260-27279 | None:intergenic | 25.0% |
| !!! | CATAATGTTTTTAAATGGAG+TGG | + | tig0003352:27584-27603 | None:intergenic | 25.0% |
| ! | GTTTCTTTCTTTCTTTAGTT+TGG | + | tig0003352:27825-27844 | None:intergenic | 25.0% |
| !! | ACATACATAATTGTTTTCCT+TGG | + | tig0003352:27847-27866 | None:intergenic | 25.0% |
| !! | TAATTTGGTTGATATAGGTT+AGG | + | tig0003352:28204-28223 | None:intergenic | 25.0% |
| !!! | GCATTTAATTTGGTTGATAT+AGG | + | tig0003352:28209-28228 | None:intergenic | 25.0% |
| ! | ATGTGTAATTCAGTAAAACA+TGG | - | tig0003352:28535-28554 | Msa1339530:intron | 25.0% |
| ! | CTCTTCAAAAACAAATCTTA+TGG | - | tig0003352:28655-28674 | Msa1339530:intron | 25.0% |
| ! | GTCTAATTACTTGTAAATGT+AGG | + | tig0003352:28964-28983 | None:intergenic | 25.0% |
| ! | AATTTCAACAGAGTTAAGAA+TGG | - | tig0003352:29038-29057 | Msa1339530:CDS | 25.0% |
| !! | TAAAGTTAGATTTTATGGAG+TGG | + | tig0003352:29519-29538 | None:intergenic | 25.0% |
| !!! | CAGTCTAAAGTTAGATTTTA+TGG | + | tig0003352:29524-29543 | None:intergenic | 25.0% |
| ! | GTTTCCATTCTACAATTTAA+AGG | - | tig0003352:29565-29584 | Msa1339530:CDS | 25.0% |
| ! | GATTCCTTTAAATTGTAGAA+TGG | + | tig0003352:29572-29591 | None:intergenic | 25.0% |
| ! | TTATAGAATAGAAAAGATGG+TGG | + | tig0003352:29638-29657 | None:intergenic | 25.0% |
| ! | GCATAGAAGAAATATTAGTA+TGG | + | tig0003352:29714-29733 | None:intergenic | 25.0% |
| ! | AAAGGATAAAATGCTACAAA+TGG | - | tig0003352:29808-29827 | Msa1339530:CDS | 25.0% |
| ! | AAGGATAAAATGCTACAAAT+GGG | - | tig0003352:29809-29828 | Msa1339530:CDS | 25.0% |
| ! | TAAATTAGTGGTTATTGAAG+AGG | - | tig0003352:30055-30074 | Msa1339530:intron | 25.0% |
| ! | GGAAGAAGAAATGAATTTAA+TGG | - | tig0003352:30076-30095 | Msa1339530:intron | 25.0% |
| ! | AGAAATGAATTTAATGGTTG+TGG | - | tig0003352:30082-30101 | Msa1339530:intron | 25.0% |
| ! | ATTTCTTGTAGTGATTATAC+CGG | - | tig0003352:30454-30473 | Msa1339530:CDS | 25.0% |
| ! | GTTATTATATTGTACTACCT+CGG | + | tig0003352:30482-30501 | None:intergenic | 25.0% |
| ! | AAACAACAATTAGATGATGT+AGG | + | tig0003352:30613-30632 | None:intergenic | 25.0% |
| TCCAAAGCCATTTACATTAA+TGG | - | tig0003352:17602-17621 | Msa1339530:intron | 30.0% | |
| ACCATTAATGTAAATGGCTT+TGG | + | tig0003352:17606-17625 | None:intergenic | 30.0% | |
| ATGATGGTACTTCCAATATT+GGG | - | tig0003352:17739-17758 | Msa1339530:intron | 30.0% | |
| ATTACCAAAAGGAAATATGG+TGG | + | tig0003352:17818-17837 | None:intergenic | 30.0% | |
| TTGCAAATGTTGCAAGTAAA+GGG | + | tig0003352:18078-18097 | None:intergenic | 30.0% | |
| TTCACTGTATTCTTGTTGAT+TGG | - | tig0003352:18205-18224 | Msa1339530:intron | 30.0% | |
| ! | TCCTCAAAACTACATTTTTG+TGG | - | tig0003352:18535-18554 | Msa1339530:intron | 30.0% |
| !! | ACCACAAAAATGTAGTTTTG+AGG | + | tig0003352:18539-18558 | None:intergenic | 30.0% |
| AATTATGGCTTACTTGTTTC+AGG | - | tig0003352:18642-18661 | Msa1339530:intron | 30.0% | |
| AGGAAGAATTGCATATAAAC+TGG | + | tig0003352:18694-18713 | None:intergenic | 30.0% | |
| GACGAAGATATAAATCTATG+AGG | - | tig0003352:18788-18807 | Msa1339530:intron | 30.0% | |
| TCAGAAAATAATCACACAGA+TGG | + | tig0003352:18875-18894 | None:intergenic | 30.0% | |
| !! | TTTTTCAGTCCTACATTAAG+AGG | - | tig0003352:18951-18970 | Msa1339530:intron | 30.0% |
| !! | AATTGGTTCAATCTTTTCTC+AGG | - | tig0003352:19212-19231 | Msa1339530:intron | 30.0% |
| ATATGCTATTGATGCAAGTA+AGG | + | tig0003352:19454-19473 | None:intergenic | 30.0% | |
| GAGAGCTTAGATATGATATT+AGG | + | tig0003352:19515-19534 | None:intergenic | 30.0% | |
| !!! | AATATATTTTGGTGTAGGCT+TGG | - | tig0003352:19540-19559 | Msa1339530:intron | 30.0% |
| AAAAAGCTTACTGTGAATAC+AGG | + | tig0003352:19678-19697 | None:intergenic | 30.0% | |
| TTATAACAGTACATGATGCA+AGG | + | tig0003352:19753-19772 | None:intergenic | 30.0% | |
| GATCTCACAATGTAGATATT+TGG | + | tig0003352:20054-20073 | None:intergenic | 30.0% | |
| ATTGATTGTAGCTATAGAAG+TGG | + | tig0003352:20145-20164 | None:intergenic | 30.0% | |
| ACTTCTATAGCTACAATCAA+TGG | - | tig0003352:20144-20163 | Msa1339530:intron | 30.0% | |
| ATCTATACAAGCAAATAGTG+AGG | - | tig0003352:20288-20307 | Msa1339530:intron | 30.0% | |
| ! | GATACATTGTTAATTTGGTG+AGG | + | tig0003352:20335-20354 | None:intergenic | 30.0% |
| ! | AAAGCACAAACTTTTATTGC+TGG | - | tig0003352:20403-20422 | Msa1339530:intron | 30.0% |
| ! | AAGCACAAACTTTTATTGCT+GGG | - | tig0003352:20404-20423 | Msa1339530:intron | 30.0% |
| CTAAAACCTTTGCATTCAAA+GGG | + | tig0003352:20587-20606 | None:intergenic | 30.0% | |
| AGAAGAGATAAACAACTAGA+GGG | + | tig0003352:20685-20704 | None:intergenic | 30.0% | |
| TAGAAGAGATAAACAACTAG+AGG | + | tig0003352:20686-20705 | None:intergenic | 30.0% | |
| TAATCCTTCAAGTAATGACT+TGG | - | tig0003352:20772-20791 | Msa1339530:intron | 30.0% | |
| TTTGACATTTGCCTAAGAAA+AGG | + | tig0003352:21018-21037 | None:intergenic | 30.0% | |
| TTATTGTCTCCATGTTTAAG+TGG | + | tig0003352:21111-21130 | None:intergenic | 30.0% | |
| CGAATTTGTGATGAGTAAAT+TGG | - | tig0003352:21147-21166 | Msa1339530:intron | 30.0% | |
| ! | TGGTGATCTAAAGTTTCATT+TGG | + | tig0003352:21270-21289 | None:intergenic | 30.0% |
| !! | CTTAACCATTTGGTTTGTTT+AGG | + | tig0003352:21405-21424 | None:intergenic | 30.0% |
| !! | TGCTTTTGGTTATCATTGTT+GGG | + | tig0003352:21431-21450 | None:intergenic | 30.0% |
| !! | TTGCTTTTGGTTATCATTGT+TGG | + | tig0003352:21432-21451 | None:intergenic | 30.0% |
| !!! | TTAAGCTTCTCTCTTTTTTG+TGG | + | tig0003352:21477-21496 | None:intergenic | 30.0% |
| AAGCCAAATTAAGATAAGAG+TGG | - | tig0003352:21582-21601 | Msa1339530:intron | 30.0% | |
| TGTCCACTCTTATCTTAATT+TGG | + | tig0003352:21588-21607 | None:intergenic | 30.0% | |
| ! | CTAGTGGATGAAAAATATAC+CGG | + | tig0003352:21970-21989 | None:intergenic | 30.0% |
| TACATAATATATGCAAGGTC+TGG | - | tig0003352:22413-22432 | Msa1339530:intron | 30.0% | |
| ACATAATATATGCAAGGTCT+GGG | - | tig0003352:22414-22433 | Msa1339530:intron | 30.0% | |
| TACTGAAGAGAAAACTTGTA+AGG | - | tig0003352:23280-23299 | Msa1339530:intron | 30.0% | |
| TCTTATGATCACTCTAACTT+TGG | - | tig0003352:23529-23548 | Msa1339530:intron | 30.0% | |
| TTAATTGTACCTTGTTCAGT+TGG | + | tig0003352:23657-23676 | None:intergenic | 30.0% | |
| GGAAGTAACAAGTGAAATAA+AGG | + | tig0003352:23771-23790 | None:intergenic | 30.0% | |
| TCCAAAGCTATTTACATCAA+TGG | - | tig0003352:23882-23901 | Msa1339530:CDS | 30.0% | |
| TTTCTTTCCTTCTAGATTAC+TGG | - | tig0003352:24011-24030 | Msa1339530:intron | 30.0% | |
| GAAAATTCCAGTAATCTAGA+AGG | + | tig0003352:24021-24040 | None:intergenic | 30.0% | |
| !! | GATTACTGGAATTTTCAAGA+TGG | - | tig0003352:24025-24044 | Msa1339530:intron | 30.0% |
| GTATGTCTTATAATTTGAGG+AGG | + | tig0003352:24156-24175 | None:intergenic | 30.0% | |
| ! | TTTACAATACTTTTCTCCAG+AGG | - | tig0003352:24271-24290 | Msa1339530:intron | 30.0% |
| ! | AAACAAATTGTCATTTCCTC+TGG | + | tig0003352:24290-24309 | None:intergenic | 30.0% |
| ! | TTTTCGCATATAATCAGTCA+AGG | - | tig0003352:24388-24407 | Msa1339530:CDS | 30.0% |
| !! | AATCATGGTTTATTGGTTTC+AGG | - | tig0003352:24739-24758 | Msa1339530:intron | 30.0% |
| ATGCATATAAAGTGGACAAA+AGG | + | tig0003352:24783-24802 | None:intergenic | 30.0% | |
| AGGAAGAAATGCATATAAAG+TGG | + | tig0003352:24791-24810 | None:intergenic | 30.0% | |
| !! | TTTTATAAGTTGGGAATGAC+CGG | - | tig0003352:25049-25068 | Msa1339530:intron | 30.0% |
| GTTGAGGACTTCAATTAAAT+CGG | + | tig0003352:25106-25125 | None:intergenic | 30.0% | |
| !! | AATTGGTTCAATCTTTTCTC+AGG | - | tig0003352:19212-19231 | Msa1339530:intron | 30.0% |
| ATATGCTATTGATGCAAGTA+AGG | + | tig0003352:19454-19473 | None:intergenic | 30.0% | |
| GAGAGCTTAGATATGAAATT+AGG | + | tig0003352:25558-25577 | None:intergenic | 30.0% | |
| !!! | AATATATTTTGGTGTAGGCT+TGG | - | tig0003352:19540-19559 | Msa1339530:intron | 30.0% |
| AACTTTCATTATGGAAATGC+AGG | + | tig0003352:25746-25765 | None:intergenic | 30.0% | |
| TTGAGTTTAATTCACTATGC+AGG | - | tig0003352:25767-25786 | Msa1339530:intron | 30.0% | |
| AAAAGGAAAACAAACCTGAT+TGG | + | tig0003352:25992-26011 | None:intergenic | 30.0% | |
| !! | TTTGGTTAGTCTTTCTGATT+AGG | + | tig0003352:26041-26060 | None:intergenic | 30.0% |
| ! | AAAGCACAAACTTTTATTGC+TGG | - | tig0003352:20403-20422 | Msa1339530:intron | 30.0% |
| ! | AAGCACAAACTTTTATTGCT+GGG | - | tig0003352:20404-20423 | Msa1339530:intron | 30.0% |
| TGTATAAATAAAGGGGAAAG+TGG | + | tig0003352:26413-26432 | None:intergenic | 30.0% | |
| ! | TGTAGTGAATTGACTTACTT+TGG | + | tig0003352:26459-26478 | None:intergenic | 30.0% |
| TCAATTCACTACAAGAAATC+TGG | - | tig0003352:26466-26485 | Msa1339530:intron | 30.0% | |
| ATTGCAACAACACAAATGTA+TGG | - | tig0003352:27051-27070 | Msa1339530:intron | 30.0% | |
| TTGCAACAACACAAATGTAT+GGG | - | tig0003352:27052-27071 | Msa1339530:intron | 30.0% | |
| TAACTCAAAATCATTGCCTT+TGG | - | tig0003352:27150-27169 | Msa1339530:intron | 30.0% | |
| CATTTATAACTTCTCAAGCT+TGG | + | tig0003352:27229-27248 | None:intergenic | 30.0% | |
| TATTGAGGTTTAATGTCAGA+AGG | + | tig0003352:27422-27441 | None:intergenic | 30.0% | |
| CTAAAGAAAGAAAGAAACCA+AGG | - | tig0003352:27827-27846 | Msa1339530:CDS | 30.0% | |
| CTGATATGTTATCTTCAGAT+GGG | + | tig0003352:27955-27974 | None:intergenic | 30.0% | |
| TCTGATATGTTATCTTCAGA+TGG | + | tig0003352:27956-27975 | None:intergenic | 30.0% | |
| GTCATTTGTGAACTTTGTTA+AGG | + | tig0003352:28103-28122 | None:intergenic | 30.0% | |
| AAGTTCACAAATGACTATAC+TGG | - | tig0003352:28108-28127 | Msa1339530:intron | 30.0% | |
| ATATCTTTGCTTCAAACACT+TGG | + | tig0003352:28146-28165 | None:intergenic | 30.0% | |
| CTTGCATGTTGCATTTAATT+TGG | + | tig0003352:28219-28238 | None:intergenic | 30.0% | |
| AAATGCAACATGCAAGTATT+AGG | - | tig0003352:28223-28242 | Msa1339530:intron | 30.0% | |
| AGTGGAATCAAACATAGTTA+AGG | + | tig0003352:28294-28313 | None:intergenic | 30.0% | |
| ACTTCAGATTGTCATGTAAA+CGG | - | tig0003352:28314-28333 | Msa1339530:intron | 30.0% | |
| AAATTTATCAAGGAACAAGG+AGG | + | tig0003352:28400-28419 | None:intergenic | 30.0% | |
| GACAAATTTATCAAGGAACA+AGG | + | tig0003352:28403-28422 | None:intergenic | 30.0% | |
| !!! | ACTTTTTTCCTTTAATGTGC+TGG | + | tig0003352:28739-28758 | None:intergenic | 30.0% |
| AATGCATCATTTGCTCATTA+TGG | + | tig0003352:28779-28798 | None:intergenic | 30.0% | |
| ATACGCACACATTTAATACA+CGG | - | tig0003352:29120-29139 | Msa1339530:intron | 30.0% | |
| ! | ACACAACATGCTTAATTTGA+TGG | - | tig0003352:29281-29300 | Msa1339530:CDS | 30.0% |
| GAAAAAGACATTAGTTAGCT+TGG | - | tig0003352:29543-29562 | Msa1339530:CDS | 30.0% | |
| AATTCATTCCATCATACAGA+TGG | - | tig0003352:29610-29629 | Msa1339530:intron | 30.0% | |
| ATGGAAGAATAACTAGAAGT+GGG | + | tig0003352:29695-29714 | None:intergenic | 30.0% | |
| TATGGAAGAATAACTAGAAG+TGG | + | tig0003352:29696-29715 | None:intergenic | 30.0% | |
| AATGAATTTAATGGTTGTGG+TGG | - | tig0003352:30085-30104 | Msa1339530:intron | 30.0% | |
| ATGAATTTAATGGTTGTGGT+GGG | - | tig0003352:30086-30105 | Msa1339530:intron | 30.0% | |
| AGAGAATGTGTGATAACAAT+TGG | - | tig0003352:30213-30232 | Msa1339530:intron | 30.0% | |
| AGAAGAGATAAAAGAATGTG+TGG | - | tig0003352:30242-30261 | Msa1339530:intron | 30.0% | |
| ! | AACGCTTTTAGCAAAAATAG+GGG | + | tig0003352:30340-30359 | None:intergenic | 30.0% |
| ! | GAACGCTTTTAGCAAAAATA+GGG | + | tig0003352:30341-30360 | None:intergenic | 30.0% |
| TTTCTTGTAGTGATTATACC+GGG | - | tig0003352:30455-30474 | Msa1339530:CDS | 30.0% | |
| CTAAAACCTTTGCATTCAAA+GGG | + | tig0003352:20587-20606 | None:intergenic | 30.0% | |
| GGAAGTAACAAGTGGAATAA+AGG | + | tig0003352:17491-17510 | None:intergenic | 35.0% | |
| TACTTCCACTAAGCATTCAT+TGG | - | tig0003352:17504-17523 | Msa1339530:CDS | 35.0% | |
| !!! | CTTTTTTCCTTCTAGATTGC+TGG | - | tig0003352:17706-17725 | Msa1339530:intron | 35.0% |
| GAAAATTCCAGCAATCTAGA+AGG | + | tig0003352:17716-17735 | None:intergenic | 35.0% | |
| !! | TGCTGGAATTTTCAAGATGA+TGG | - | tig0003352:17723-17742 | Msa1339530:intron | 35.0% |
| ! | GATGATGGTACTTCCAATAT+TGG | - | tig0003352:17738-17757 | Msa1339530:intron | 35.0% |
| !! | GATTGATAGTGCAAACTCTA+TGG | - | tig0003352:18010-18029 | Msa1339530:intron | 35.0% |
| GTTGCAAATGTTGCAAGTAA+AGG | + | tig0003352:18079-18098 | None:intergenic | 35.0% | |
| CATTTGCAACAACTATAGAG+TGG | - | tig0003352:18089-18108 | Msa1339530:intron | 35.0% | |
| TGATATATCTTTCCTCTGTC+AGG | - | tig0003352:18412-18431 | Msa1339530:intron | 35.0% | |
| ! | TTTTCTGCTTCACATGTTGT+TGG | - | tig0003352:18491-18510 | Msa1339530:intron | 35.0% |
| TTTCTGCTTCACATGTTGTT+GGG | - | tig0003352:18492-18511 | Msa1339530:intron | 35.0% | |
| ! | TGTCTCTTTCTTTTATGAGC+TGG | - | tig0003352:18983-19002 | Msa1339530:intron | 35.0% |
| ! | GTCTCTTTCTTTTATGAGCT+GGG | - | tig0003352:18984-19003 | Msa1339530:intron | 35.0% |
| ATTATGAGACTGTCAAGCTA+TGG | + | tig0003352:19117-19136 | None:intergenic | 35.0% | |
| ATTCTCAGAACTTCTGATGA+TGG | - | tig0003352:19185-19204 | Msa1339530:intron | 35.0% | |
| ! | CAATCTTTTCTCAGGTACAA+CGG | - | tig0003352:19220-19239 | Msa1339530:intron | 35.0% |
| ATTGCAATCATCAGTATGGA+GGG | + | tig0003352:19272-19291 | None:intergenic | 35.0% | |
| ! | AAGCATTGCAATCATCAGTA+TGG | + | tig0003352:19276-19295 | None:intergenic | 35.0% |
| GTATTGGAAGTAACACAATC+TGG | + | tig0003352:19392-19411 | None:intergenic | 35.0% | |
| ACTTCCAATACTCAATCCAT+TGG | - | tig0003352:19401-19420 | Msa1339530:intron | 35.0% | |
| TGAGTTTCATTCACAAATGC+AGG | - | tig0003352:19848-19867 | Msa1339530:intron | 35.0% | |
| ! | CCAAATGAGGCACTTAAATA+TGG | + | tig0003352:19876-19895 | None:intergenic | 35.0% |
| CCATATTTAAGTGCCTCATT+TGG | - | tig0003352:19873-19892 | Msa1339530:intron | 35.0% | |
| GACATAGATAATGCCAAATG+AGG | + | tig0003352:19889-19908 | None:intergenic | 35.0% | |
| TTCGATGCACGTGTAAAAAA+AGG | + | tig0003352:19976-19995 | None:intergenic | 35.0% | |
| TACAAAAAAAAGTGGCATCG+TGG | + | tig0003352:20009-20028 | None:intergenic | 35.0% | |
| GTAGCTATAGAAGTGGATAA+CGG | + | tig0003352:20138-20157 | None:intergenic | 35.0% | |
| AAAAGGACAACAAACCTGAT+TGG | + | tig0003352:20244-20263 | None:intergenic | 35.0% | |
| TTATGGTGTAACTTAACTGC+AGG | - | tig0003352:20378-20397 | Msa1339530:intron | 35.0% | |
| TATGGTGTAACTTAACTGCA+GGG | - | tig0003352:20379-20398 | Msa1339530:intron | 35.0% | |
| ! | AGCACAAACTTTTATTGCTG+GGG | - | tig0003352:20405-20424 | Msa1339530:intron | 35.0% |
| GTCAAAGGACTCATTACAAT+TGG | + | tig0003352:20457-20476 | None:intergenic | 35.0% | |
| GTATTCTACTCACAAGTCAA+AGG | + | tig0003352:20472-20491 | None:intergenic | 35.0% | |
| GCTAAAACCTTTGCATTCAA+AGG | + | tig0003352:20588-20607 | None:intergenic | 35.0% | |
| TATATGTGCATCTGTATGCA+TGG | - | tig0003352:20610-20629 | Msa1339530:intron | 35.0% | |
| !! | GTAGAGTTGATGAAAGGAAA+TGG | + | tig0003352:20663-20682 | None:intergenic | 35.0% |
| ! | GCAATAGACATTTGAAGCAA+AGG | + | tig0003352:20901-20920 | None:intergenic | 35.0% |
| ! | AGAAAAGTGGACCTTTTCTT+AGG | - | tig0003352:21004-21023 | Msa1339530:intron | 35.0% |
| !!! | ACTTTTTTGGCTTTTTGCTC+TGG | + | tig0003352:21323-21342 | None:intergenic | 35.0% |
| !! | TTTTGGTTATCATTGTTGGG+GGG | + | tig0003352:21428-21447 | None:intergenic | 35.0% |
| !! | CTTTTGGTTATCATTGTTGG+GGG | + | tig0003352:21429-21448 | None:intergenic | 35.0% |
| !! | GCTTTTGGTTATCATTGTTG+GGG | + | tig0003352:21430-21449 | None:intergenic | 35.0% |
| !!! | TCTCTCTTTTTTGTGGTAGA+AGG | + | tig0003352:21470-21489 | None:intergenic | 35.0% |
| !! | AATTTGGCTTTCGTGCATTT+GGG | + | tig0003352:21572-21591 | None:intergenic | 35.0% |
| !! | TAATTTGGCTTTCGTGCATT+TGG | + | tig0003352:21573-21592 | None:intergenic | 35.0% |
| TGGACATCAAACATCCTAAT+TGG | - | tig0003352:21602-21621 | Msa1339530:intron | 35.0% | |
| AAGTGATCAAACAAGTGCAA+TGG | - | tig0003352:21637-21656 | Msa1339530:intron | 35.0% | |
| TGTCAAGTAGAACCAAAAAG+AGG | - | tig0003352:21684-21703 | Msa1339530:intron | 35.0% | |
| GTCAAGTAGAACCAAAAAGA+GGG | - | tig0003352:21685-21704 | Msa1339530:intron | 35.0% | |
| ! | TGTTTATCTTGCCCTCTTTT+TGG | + | tig0003352:21699-21718 | None:intergenic | 35.0% |
| CTACAAAGGACAATATGCAT+AGG | + | tig0003352:21794-21813 | None:intergenic | 35.0% | |
| CTATGCATATTGTCCTTTGT+AGG | - | tig0003352:21792-21811 | Msa1339530:intron | 35.0% | |
| CAAAATTCCTAATTGGAGAC+CGG | - | tig0003352:21948-21967 | Msa1339530:intron | 35.0% | |
| AAATATACCGGTCTCCAATT+AGG | + | tig0003352:21958-21977 | None:intergenic | 35.0% | |
| ! | CGGTATATTTTTCATCCACT+AGG | - | tig0003352:21968-21987 | Msa1339530:intron | 35.0% |
| GCTCTTATAATTAAGGACGA+AGG | - | tig0003352:22278-22297 | Msa1339530:CDS | 35.0% | |
| CTTATAATTAAGGACGAAGG+TGG | - | tig0003352:22281-22300 | Msa1339530:CDS | 35.0% | |
| CATAATATATGCAAGGTCTG+GGG | - | tig0003352:22415-22434 | Msa1339530:intron | 35.0% | |
| GGTTAAAATTCACATGGATC+CGG | + | tig0003352:22582-22601 | None:intergenic | 35.0% | |
| AGTTATCCTCAAGAAATGGA+AGG | - | tig0003352:22731-22750 | Msa1339530:intron | 35.0% | |
| GTTATCCTCAAGAAATGGAA+GGG | - | tig0003352:22732-22751 | Msa1339530:intron | 35.0% | |
| ! | GCCAAGCTTTTGTGAAAAAA+TGG | - | tig0003352:23245-23264 | Msa1339530:intron | 35.0% |
| !!! | GCCATTTTTTCACAAAAGCT+TGG | + | tig0003352:23249-23268 | None:intergenic | 35.0% |
| AAACTGAGCGTGGAAATATT+AGG | - | tig0003352:23307-23326 | Msa1339530:intron | 35.0% | |
| AACTGAGCGTGGAAATATTA+GGG | - | tig0003352:23308-23327 | Msa1339530:intron | 35.0% | |
| !! | ACACATCAAAGTATTGACGT+CGG | - | tig0003352:23571-23590 | Msa1339530:intron | 35.0% |
| AAGTTATGTCCAACTGAACA+AGG | - | tig0003352:23645-23664 | Msa1339530:CDS | 35.0% | |
| TACTTCCACTAAGCATTCAT+TGG | - | tig0003352:17504-17523 | Msa1339530:CDS | 35.0% | |
| GCCATTGATGTAAATAGCTT+TGG | + | tig0003352:23886-23905 | None:intergenic | 35.0% | |
| !! | TACTGGAATTTTCAAGATGG+TGG | - | tig0003352:24028-24047 | Msa1339530:intron | 35.0% |
| ! | AGGTATTATACTGGTGGATA+TGG | + | tig0003352:24114-24133 | None:intergenic | 35.0% |
| ! | TCCACCAGTATAATACCTTT+TGG | - | tig0003352:24116-24135 | Msa1339530:intron | 35.0% |
| !! | ACCAAAAGGTATTATACTGG+TGG | + | tig0003352:24120-24139 | None:intergenic | 35.0% |
| ! | TTGTTGTAGCTTTACTTGCT+TGG | - | tig0003352:24320-24339 | Msa1339530:intron | 35.0% |
| ACTTGCTTGGAATCAATCTA+AGG | - | tig0003352:24333-24352 | Msa1339530:intron | 35.0% | |
| AAAGAGCAGCAGTATTTAGT+TGG | - | tig0003352:24551-24570 | Msa1339530:intron | 35.0% | |
| ! | TCCTCAAAACTGCATTTTTG+TGG | - | tig0003352:24630-24649 | Msa1339530:intron | 35.0% |
| ! | ACCACAAAAATGCAGTTTTG+AGG | + | tig0003352:24634-24653 | None:intergenic | 35.0% |
| GACGAAGATACAAATCTATG+AGG | - | tig0003352:24885-24904 | Msa1339530:intron | 35.0% | |
| ! | ATTTTCAGTCCTGCATTAAG+AGG | - | tig0003352:25007-25026 | Msa1339530:intron | 35.0% |
| TAAATAGTAGTGACACAGCA+AGG | + | tig0003352:25135-25154 | None:intergenic | 35.0% | |
| ! | TGAGACTGTCGATTAAACTA+TGG | + | tig0003352:25179-25198 | None:intergenic | 35.0% |
| CATACAATCATCAGTATGGA+GGG | + | tig0003352:25339-25358 | None:intergenic | 35.0% | |
| TCATACAATCATCAGTATGG+AGG | + | tig0003352:25340-25359 | None:intergenic | 35.0% | |
| GTATTGGAAGCAATACAATC+TGG | + | tig0003352:25435-25454 | None:intergenic | 35.0% | |
| GCTTCCAATACTTAATCCTT+TGG | - | tig0003352:25444-25463 | Msa1339530:intron | 35.0% | |
| CCAACCAAAGGATTAAGTAT+TGG | + | tig0003352:25451-25470 | None:intergenic | 35.0% | |
| CCAATACTTAATCCTTTGGT+TGG | - | tig0003352:25448-25467 | Msa1339530:intron | 35.0% | |
| AAGGTCATTGTAACAGTACA+TGG | + | tig0003352:25680-25699 | None:intergenic | 35.0% | |
| ATTAATCTACTACTCACAGC+AGG | + | tig0003352:25840-25859 | None:intergenic | 35.0% | |
| ! | AGCACAAACTTTTATTGCTG+GGG | - | tig0003352:20405-20424 | Msa1339530:intron | 35.0% |
| GTCAAAGGACTCATTACAAT+TGG | + | tig0003352:20457-20476 | None:intergenic | 35.0% | |
| ! | AAGAAATCTGGTAATTTGCC+AGG | - | tig0003352:26478-26497 | Msa1339530:intron | 35.0% |
| ! | AGAAATCTGGTAATTTGCCA+GGG | - | tig0003352:26479-26498 | Msa1339530:intron | 35.0% |
| !! | AGTCATTTTCAAAACATGCC+AGG | - | tig0003352:26730-26749 | Msa1339530:intron | 35.0% |
| !! | GTCATTTTCAAAACATGCCA+GGG | - | tig0003352:26731-26750 | Msa1339530:intron | 35.0% |
| ! | TATTCGTACACATTTTGCCA+GGG | + | tig0003352:26775-26794 | None:intergenic | 35.0% |
| ! | ATATTCGTACACATTTTGCC+AGG | + | tig0003352:26776-26795 | None:intergenic | 35.0% |
| TGCAACAACACAAATGTATG+GGG | - | tig0003352:27053-27072 | Msa1339530:intron | 35.0% | |
| !! | TTGATTTGGTACACATCCAA+AGG | + | tig0003352:27169-27188 | None:intergenic | 35.0% |
| ! | AAGAGTTGAAGCACTTGATT+TGG | + | tig0003352:27183-27202 | None:intergenic | 35.0% |
| !! | TATGGCATTGATGCAATTGA+CGG | + | tig0003352:27338-27357 | None:intergenic | 35.0% |
| ! | TTTAATGTCAGAAGGCATAG+GGG | + | tig0003352:27414-27433 | None:intergenic | 35.0% |
| ! | GTTTAATGTCAGAAGGCATA+GGG | + | tig0003352:27415-27434 | None:intergenic | 35.0% |
| TCTAAAAGGTTCAAGAGCAA+AGG | - | tig0003352:27638-27657 | Msa1339530:intron | 35.0% | |
| TTCTTTGTAGCTGATGTTGT+AGG | + | tig0003352:27759-27778 | None:intergenic | 35.0% | |
| ! | ATTGAAAAAGCGCAGAGAAA+AGG | + | tig0003352:27911-27930 | None:intergenic | 35.0% |
| TTCAGATGGGAAACTACATA+AGG | + | tig0003352:27942-27961 | None:intergenic | 35.0% | |
| ! | TACATGACAATCTGAAGTAG+TGG | + | tig0003352:28312-28331 | None:intergenic | 35.0% |
| ! | GATTGCTACTAAGATTTTGC+AGG | - | tig0003352:28681-28700 | Msa1339530:CDS | 35.0% |
| ACAAGATACCAGCACATTAA+AGG | - | tig0003352:28728-28747 | Msa1339530:intron | 35.0% | |
| !! | ACATGTATGAGAGTTTTGGT+TGG | + | tig0003352:28855-28874 | None:intergenic | 35.0% |
| AACCAAAACTCTCATACATG+TGG | - | tig0003352:28854-28873 | Msa1339530:intron | 35.0% | |
| CATGTGGAGAATTGACATAA+AGG | - | tig0003352:28870-28889 | Msa1339530:intron | 35.0% | |
| TTCAACAGAGTTAAGAATGG+TGG | - | tig0003352:29041-29060 | Msa1339530:CDS | 35.0% | |
| CTAAATCCATCTTCAATGAG+GGG | + | tig0003352:29076-29095 | None:intergenic | 35.0% | |
| GCTAAATCCATCTTCAATGA+GGG | + | tig0003352:29077-29096 | None:intergenic | 35.0% | |
| TGCTAAATCCATCTTCAATG+AGG | + | tig0003352:29078-29097 | None:intergenic | 35.0% | |
| TGGAAAATAGCAAGTGTAGT+GGG | + | tig0003352:29408-29427 | None:intergenic | 35.0% | |
| CGTGTTTATGAATGTTTGCA+GGG | + | tig0003352:29669-29688 | None:intergenic | 35.0% | |
| ACGTGTTTATGAATGTTTGC+AGG | + | tig0003352:29670-29689 | None:intergenic | 35.0% | |
| TGGAAGAATAACTAGAAGTG+GGG | + | tig0003352:29694-29713 | None:intergenic | 35.0% | |
| ACTCACCCAAATGAAGAAAA+AGG | - | tig0003352:29790-29809 | Msa1339530:CDS | 35.0% | |
| !! | AATGCTACAAATGGGTTTTC+CGG | - | tig0003352:29817-29836 | Msa1339530:intron | 35.0% |
| TCTCCAATCCCGAAATAAAT+TGG | - | tig0003352:29903-29922 | Msa1339530:intron | 35.0% | |
| CTCCAATCCCGAAATAAATT+GGG | - | tig0003352:29904-29923 | Msa1339530:intron | 35.0% | |
| TCCAATCCCGAAATAAATTG+GGG | - | tig0003352:29905-29924 | Msa1339530:intron | 35.0% | |
| CAAAACCCCCAATTTATTTC+GGG | + | tig0003352:29914-29933 | None:intergenic | 35.0% | |
| CCAAAACCCCCAATTTATTT+CGG | + | tig0003352:29915-29934 | None:intergenic | 35.0% | |
| !! | CAGCTTTGTTTATCCAAATG+AGG | - | tig0003352:29963-29982 | Msa1339530:CDS | 35.0% |
| GTTTATCCAAATGAGGTCAA+TGG | - | tig0003352:29970-29989 | Msa1339530:CDS | 35.0% | |
| TGAATTTAATGGTTGTGGTG+GGG | - | tig0003352:30087-30106 | Msa1339530:intron | 35.0% | |
| TAAAGGGGAAATAATAAGCC+AGG | - | tig0003352:30287-30306 | Msa1339530:intron | 35.0% | |
| AAAGGGGAAATAATAAGCCA+GGG | - | tig0003352:30288-30307 | Msa1339530:intron | 35.0% | |
| ! | GGAACGCTTTTAGCAAAAAT+AGG | + | tig0003352:30342-30361 | None:intergenic | 35.0% |
| AGAAATGTTGCATATTGCCA+GGG | + | tig0003352:30440-30459 | None:intergenic | 35.0% | |
| AAGAAATGTTGCATATTGCC+AGG | + | tig0003352:30441-30460 | None:intergenic | 35.0% | |
| GCTAAAACCTTTGCATTCAA+AGG | + | tig0003352:20588-20607 | None:intergenic | 35.0% | |
| TGCTTAGTGGAAGTAACAAG+TGG | + | tig0003352:17499-17518 | None:intergenic | 40.0% | |
| GCAATCCAATGAATGCTTAG+TGG | + | tig0003352:17512-17531 | None:intergenic | 40.0% | |
| TTGTTGAGGACATAAAGCAG+TGG | + | tig0003352:17573-17592 | None:intergenic | 40.0% | |
| TTGGAGCAAGATGATTGTTG+AGG | + | tig0003352:17587-17606 | None:intergenic | 40.0% | |
| GACATGGTAACAAGGAGTAA+AGG | + | tig0003352:17793-17812 | None:intergenic | 40.0% | |
| ! | TCCACCACCATATTTCCTTT+TGG | - | tig0003352:17811-17830 | Msa1339530:intron | 40.0% |
| ACCAAAAGGAAATATGGTGG+TGG | + | tig0003352:17815-17834 | None:intergenic | 40.0% | |
| CAATTGCAACAACTGTTGAG+TGG | - | tig0003352:18115-18134 | Msa1339530:intron | 40.0% | |
| ! | TTGGTGTAGCTTTACTTGCT+TGG | - | tig0003352:18224-18243 | Msa1339530:intron | 40.0% |
| ACTTGCTTGGAATCAATCTG+AGG | - | tig0003352:18237-18256 | Msa1339530:intron | 40.0% | |
| AACAAAAGGGCAGCAGTATT+TGG | - | tig0003352:18452-18471 | Msa1339530:intron | 40.0% | |
| TAAATCTATGAGGAATGCCG+CGG | - | tig0003352:18798-18817 | Msa1339530:intron | 40.0% | |
| CCTGAAGATTACTATTTCCG+CGG | + | tig0003352:18818-18837 | None:intergenic | 40.0% | |
| ! | TTTTATGAGCTGGGAATGTC+TGG | - | tig0003352:18993-19012 | Msa1339530:intron | 40.0% |
| ! | TGGTATAACAACCGTTTTGC+TGG | - | tig0003352:19013-19032 | Msa1339530:intron | 40.0% |
| !! | TCAGAACTTCTGATGATGGT+CGG | - | tig0003352:19189-19208 | Msa1339530:intron | 40.0% |
| CATTGCAATCATCAGTATGG+AGG | + | tig0003352:19273-19292 | None:intergenic | 40.0% | |
| !! | CCAACCAATGGATTGAGTAT+TGG | + | tig0003352:19408-19427 | None:intergenic | 40.0% |
| CCAATACTCAATCCATTGGT+TGG | - | tig0003352:19405-19424 | Msa1339530:intron | 40.0% | |
| ATCACTTTCTCTCCAACCAA+TGG | + | tig0003352:19420-19439 | None:intergenic | 40.0% | |
| !! | TTGGCTTTCTGGATTAGCAT+GGG | - | tig0003352:19559-19578 | Msa1339530:intron | 40.0% |
| TTACTGTGAATACAGGACAC+AGG | + | tig0003352:19671-19690 | None:intergenic | 40.0% | |
| ATCACATATCTACTCACAGC+TGG | + | tig0003352:19921-19940 | None:intergenic | 40.0% | |
| CAATGTAGATATTTGGCGAG+AGG | + | tig0003352:20047-20066 | None:intergenic | 40.0% | |
| TAATTGCAGTATCAGGAGAC+AGG | + | tig0003352:20171-20190 | None:intergenic | 40.0% | |
| !! | TAGAGGGTAGAGTTGATGAA+AGG | + | tig0003352:20669-20688 | None:intergenic | 40.0% |
| CCTTCCAAGTCATTACTTGA+AGG | + | tig0003352:20779-20798 | None:intergenic | 40.0% | |
| ! | CCTTCAAGTAATGACTTGGA+AGG | - | tig0003352:20776-20795 | Msa1339530:intron | 40.0% |
| AATCAGCTATGATCCAGAAG+CGG | + | tig0003352:20815-20834 | None:intergenic | 40.0% | |
| ! | ATAGTTGGGTATGGGTTACA+AGG | - | tig0003352:20957-20976 | Msa1339530:intron | 40.0% |
| ACCACTCAACCACTTAAACA+TGG | - | tig0003352:21099-21118 | Msa1339530:intron | 40.0% | |
| TCCATGTTTAAGTGGTTGAG+TGG | + | tig0003352:21103-21122 | None:intergenic | 40.0% | |
| CGATGCCTAAACAAACCAAA+TGG | - | tig0003352:21397-21416 | Msa1339530:intron | 40.0% | |
| TTTCGTGCATTTGGGTGTTA+CGG | + | tig0003352:21564-21583 | None:intergenic | 40.0% | |
| TATTGTCCTTTGTAGGAAGC+CGG | - | tig0003352:21799-21818 | Msa1339530:intron | 40.0% | |
| TGTACCTCGTTAAGCCAAAT+AGG | - | tig0003352:21861-21880 | Msa1339530:intron | 40.0% | |
| ! | GAATCCTATTTGGCTTAACG+AGG | + | tig0003352:21868-21887 | None:intergenic | 40.0% |
| ! | CGGTCTCCAATTAGGAATTT+TGG | + | tig0003352:21950-21969 | None:intergenic | 40.0% |
| TACCAATTGAGCTAAGCTCA+CGG | + | tig0003352:22381-22400 | None:intergenic | 40.0% | |
| TGAGCTTAGCTCAATTGGTA+AGG | - | tig0003352:22381-22400 | Msa1339530:intron | 40.0% | |
| ! | ATGAGATCCAAGTGATTTGC+CGG | - | tig0003352:22560-22579 | Msa1339530:intron | 40.0% |
| TTATTTATCTTGAGGGGGTG+CGG | + | tig0003352:22707-22726 | None:intergenic | 40.0% | |
| CAGAATTTACGTCACTCCAT+TGG | + | tig0003352:22808-22827 | None:intergenic | 40.0% | |
| TGTGAAAAAATGGCAGTTCG+AGG | - | tig0003352:23255-23274 | Msa1339530:intron | 40.0% | |
| GTGAAAAAATGGCAGTTCGA+GGG | - | tig0003352:23256-23275 | Msa1339530:intron | 40.0% | |
| GTAAGGTATAAAACTGAGCG+TGG | - | tig0003352:23297-23316 | Msa1339530:intron | 40.0% | |
| CGTTGACCACAATCAAGATT+TGG | - | tig0003352:23375-23394 | Msa1339530:CDS | 40.0% | |
| GACGTCAATACTTTGATGTG+TGG | + | tig0003352:23572-23591 | None:intergenic | 40.0% | |
| GTTGGAAAGGAAGAATACAG+TGG | + | tig0003352:23614-23633 | None:intergenic | 40.0% | |
| GCAATCCAATGAATGCTTAG+TGG | + | tig0003352:17512-17531 | None:intergenic | 40.0% | |
| TGGAGCAAGATGATTGTTGA+GGG | + | tig0003352:17586-17605 | None:intergenic | 40.0% | |
| TTGGAGCAAGATGATTGTTG+AGG | + | tig0003352:17587-17606 | None:intergenic | 40.0% | |
| !! | ATGGTGGTACTTCCACTTTT+GGG | - | tig0003352:24044-24063 | Msa1339530:intron | 40.0% |
| GATATGGTAAGAAGGAGTAG+AGG | + | tig0003352:24098-24117 | None:intergenic | 40.0% | |
| ! | TACTGGTGGATATGGTAAGA+AGG | + | tig0003352:24106-24125 | None:intergenic | 40.0% |
| AAATGTGCGAAGCACATAGT+AGG | + | tig0003352:24371-24390 | None:intergenic | 40.0% | |
| ACAACATCTGCCTAAAAGAG+AGG | + | tig0003352:24520-24539 | None:intergenic | 40.0% | |
| GCAGTATTTAGTTGGATCAC+TGG | - | tig0003352:24559-24578 | Msa1339530:intron | 40.0% | |
| TCTTCTGCTGCACATGTTAT+TGG | - | tig0003352:24586-24605 | Msa1339530:intron | 40.0% | |
| CTTCTGCTGCACATGTTATT+GGG | - | tig0003352:24587-24606 | Msa1339530:intron | 40.0% | |
| TTATTGGGAACGTCTTTGCT+CGG | - | tig0003352:24602-24621 | Msa1339530:intron | 40.0% | |
| CCAGTTTCACAGTTTCAACT+AGG | + | tig0003352:24811-24830 | None:intergenic | 40.0% | |
| CCTAGTTGAAACTGTGAAAC+TGG | - | tig0003352:24808-24827 | Msa1339530:intron | 40.0% | |
| GAAACTGTGAAACTGGATAC+AGG | - | tig0003352:24815-24834 | Msa1339530:intron | 40.0% | |
| ACAGGAAAGAACCAAGAGTT+AGG | - | tig0003352:24833-24852 | Msa1339530:intron | 40.0% | |
| TAGTACAGAAGCCTAACTCT+TGG | + | tig0003352:24847-24866 | None:intergenic | 40.0% | |
| CCTGAAGATTACTATTTCCG+CGG | + | tig0003352:18818-18837 | None:intergenic | 40.0% | |
| CACAGCAAGGAAAAAAGTTG+AGG | + | tig0003352:25122-25141 | None:intergenic | 40.0% | |
| GTTCTCAGAACTTCTGATGA+TGG | - | tig0003352:25251-25270 | Msa1339530:intron | 40.0% | |
| !! | TCAGAACTTCTGATGATGGT+CGG | - | tig0003352:19189-19208 | Msa1339530:intron | 40.0% |
| TCAGGTATAATGCTTCTCAG+AGG | - | tig0003352:25296-25315 | Msa1339530:intron | 40.0% | |
| ATCACTTTCTCTCCAACCAA+AGG | + | tig0003352:19420-19439 | None:intergenic | 40.0% | |
| !! | TTGGCTTTCTGGATTAGCAT+GGG | - | tig0003352:19559-19578 | Msa1339530:intron | 40.0% |
| ACTATGCAGGTACCATACTT+AGG | - | tig0003352:25780-25799 | Msa1339530:intron | 40.0% | |
| GTATTCCACTCACAAGTCAA+AGG | + | tig0003352:26187-26206 | None:intergenic | 40.0% | |
| ! | GAAATCTGGTAATTTGCCAG+GGG | - | tig0003352:26480-26499 | Msa1339530:intron | 40.0% |
| ! | AGGATTTCTGCATTTTGCCA+GGG | + | tig0003352:26512-26531 | None:intergenic | 40.0% |
| ! | AAGGATTTCTGCATTTTGCC+AGG | + | tig0003352:26513-26532 | None:intergenic | 40.0% |
| TGGCAAAATGCAGAAATCCT+TGG | - | tig0003352:26512-26531 | Msa1339530:intron | 40.0% | |
| ATGCAGAAATCCTTGGCAAA+TGG | - | tig0003352:26519-26538 | Msa1339530:intron | 40.0% | |
| AATTGTGTCTGCATGATTGC+AGG | - | tig0003352:26667-26686 | Msa1339530:intron | 40.0% | |
| ! | ATTCGTACACATTTTGCCAG+GGG | + | tig0003352:26774-26793 | None:intergenic | 40.0% |
| TGGGGACAATAAAACTCCAT+TGG | - | tig0003352:27071-27090 | Msa1339530:intron | 40.0% | |
| TTCTCAAGCTTGGACTGATA+CGG | + | tig0003352:27219-27238 | None:intergenic | 40.0% | |
| ! | GGTTTAATGTCAGAAGGCAT+AGG | + | tig0003352:27416-27435 | None:intergenic | 40.0% |
| ! | TTGTAGCATTTAGTTCCCTC+TGG | + | tig0003352:27713-27732 | None:intergenic | 40.0% |
| CAGCTACAAAGAAATAGCAG+CGG | - | tig0003352:27766-27785 | Msa1339530:intron | 40.0% | |
| ATCAGAGTTGAGAGGAACTT+TGG | + | tig0003352:28069-28088 | None:intergenic | 40.0% | |
| AAAGTTCCTCTCAACTCTGA+TGG | - | tig0003352:28068-28087 | Msa1339530:intron | 40.0% | |
| GTGGCTGCATTTCTGTTAAA+TGG | + | tig0003352:28175-28194 | None:intergenic | 40.0% | |
| !! | GATATAGGTTAGGTTGACAG+TGG | + | tig0003352:28194-28213 | None:intergenic | 40.0% |
| !! | CAAGGAACAAGGAGGTATTT+GGG | + | tig0003352:28392-28411 | None:intergenic | 40.0% |
| !! | TCAAGGAACAAGGAGGTATT+TGG | + | tig0003352:28393-28412 | None:intergenic | 40.0% |
| AATTGAAGAACCAAGCAGAC+AGG | - | tig0003352:28499-28518 | Msa1339530:intron | 40.0% | |
| ATGCATTTCATTCCAGCTCT+CGG | - | tig0003352:28792-28811 | Msa1339530:CDS | 40.0% | |
| !!! | TGTATGAGAGTTTTGGTTGG+TGG | + | tig0003352:28852-28871 | None:intergenic | 40.0% |
| ! | CTCCACATGTATGAGAGTTT+TGG | + | tig0003352:28859-28878 | None:intergenic | 40.0% |
| TAAGTTCCCCTCATTGAAGA+TGG | - | tig0003352:29067-29086 | Msa1339530:CDS | 40.0% | |
| !! | AAATAGCAAGTGTAGTGGGT+GGG | + | tig0003352:29404-29423 | None:intergenic | 40.0% |
| ! | AAAATAGCAAGTGTAGTGGG+TGG | + | tig0003352:29405-29424 | None:intergenic | 40.0% |
| GTGGAAAATAGCAAGTGTAG+TGG | + | tig0003352:29409-29428 | None:intergenic | 40.0% | |
| TCTGCAGACACAATATCTAG+TGG | + | tig0003352:29428-29447 | None:intergenic | 40.0% | |
| CCAATCCCGAAATAAATTGG+GGG | - | tig0003352:29906-29925 | Msa1339530:intron | 40.0% | |
| ! | CCGAAATAAATTGGGGGTTT+TGG | - | tig0003352:29912-29931 | Msa1339530:intron | 40.0% |
| !!! | TAAATTGGGGGTTTTGGTTG+TGG | - | tig0003352:29918-29937 | Msa1339530:CDS | 40.0% |
| TAAGAGAGAAGGTGGTGATT+TGG | - | tig0003352:30004-30023 | Msa1339530:CDS | 40.0% | |
| AAGAGAGAAGGTGGTGATTT+GGG | - | tig0003352:30005-30024 | Msa1339530:CDS | 40.0% | |
| ! | AGAAGAAGAAGAGAAGCGTA+CGG | - | tig0003352:30174-30193 | Msa1339530:intron | 40.0% |
| AAGGGGAAATAATAAGCCAG+GGG | - | tig0003352:30289-30308 | Msa1339530:intron | 40.0% | |
| TCTATGTGCATCCATATGCA+TGG | - | tig0003352:30567-30586 | Msa1339530:intron | 40.0% | |
| TAGATAGCTCACCATGCATA+TGG | + | tig0003352:30581-30600 | None:intergenic | 40.0% | |
| TGCATGCTAAATCCTGATAC+TGG | - | tig0003352:30727-30746 | Msa1339530:CDS | 40.0% | |
| TCATCACTTGAACCAGTATC+AGG | + | tig0003352:30742-30761 | None:intergenic | 40.0% | |
| ! | TGGTTCAAGTGATGATGACT+TGG | - | tig0003352:30747-30766 | Msa1339530:CDS | 40.0% |
| ! | TTCAAGTGATGATGACTTGG+AGG | - | tig0003352:30750-30769 | Msa1339530:CDS | 40.0% |
| TCTGAAAGCTGGCCCAATAT+TGG | + | tig0003352:17754-17773 | None:intergenic | 45.0% | |
| GACCATGTTCATCTGAAAGC+TGG | + | tig0003352:17765-17784 | None:intergenic | 45.0% | |
| !! | AGGAAATATGGTGGTGGACA+TGG | + | tig0003352:17809-17828 | None:intergenic | 45.0% |
| AATTGTGCGAAGCACGTAGT+AGG | + | tig0003352:18275-18294 | None:intergenic | 45.0% | |
| AAAGGGCAGCAGTATTTGGT+TGG | - | tig0003352:18456-18475 | Msa1339530:intron | 45.0% | |
| GCAGTATTTGGTTGGATCAC+TGG | - | tig0003352:18464-18483 | Msa1339530:intron | 45.0% | |
| ACATGTTGTTGGGAACGTCT+TGG | - | tig0003352:18502-18521 | Msa1339530:intron | 45.0% | |
| CCTAACTCTCGGTTCTTTGT+GGG | + | tig0003352:18739-18758 | None:intergenic | 45.0% | |
| TAGAGCAGAAGCCTAACTCT+CGG | + | tig0003352:18750-18769 | None:intergenic | 45.0% | |
| CCGCGGAAATAGTAATCTTC+AGG | - | tig0003352:18815-18834 | Msa1339530:intron | 45.0% | |
| CAGTCCTACATTAAGAGGCA+TGG | - | tig0003352:18956-18975 | Msa1339530:intron | 45.0% | |
| AGAGCCATGCCTCTTAATGT+AGG | + | tig0003352:18963-18982 | None:intergenic | 45.0% | |
| CACAACAAGGCAAAACGTTG+AGG | + | tig0003352:19066-19085 | None:intergenic | 45.0% | |
| !! | CTTCTGATGATGGTCGGAAT+TGG | - | tig0003352:19195-19214 | Msa1339530:intron | 45.0% |
| CATCAGTATGGAGGGATCAA+AGG | + | tig0003352:19264-19283 | None:intergenic | 45.0% | |
| !! | CTTGGCTTTCTGGATTAGCA+TGG | - | tig0003352:19558-19577 | Msa1339530:intron | 45.0% |
| ! | TACTCACAGCTGGTTTCACA+AGG | + | tig0003352:19911-19930 | None:intergenic | 45.0% |
| AGCATCAAGCTCAACCAATC+AGG | - | tig0003352:20227-20246 | Msa1339530:intron | 45.0% | |
| TTGGTGAGGGATAATGCTCT+TGG | + | tig0003352:20321-20340 | None:intergenic | 45.0% | |
| GATGCTCCCTTTGAATGCAA+AGG | - | tig0003352:20578-20597 | Msa1339530:intron | 45.0% | |
| ATCAGCTATGATCCAGAAGC+GGG | + | tig0003352:20814-20833 | None:intergenic | 45.0% | |
| GCTTCTGGATCATAGCTGAT+TGG | - | tig0003352:20814-20833 | Msa1339530:intron | 45.0% | |
| ! | TGGGTATGGGTTACAAGGTT+AGG | - | tig0003352:20962-20981 | Msa1339530:intron | 45.0% |
| CACACTTCCTCACTAGCAAA+AGG | - | tig0003352:21293-21312 | Msa1339530:intron | 45.0% | |
| CATGACAACCAGTTGTGTGT+TGG | + | tig0003352:21756-21775 | None:intergenic | 45.0% | |
| ACACACAACTGGTTGTCATG+TGG | - | tig0003352:21756-21775 | Msa1339530:intron | 45.0% | |
| CACACAACTGGTTGTCATGT+GGG | - | tig0003352:21757-21776 | Msa1339530:intron | 45.0% | |
| TATAGCATCTGCTCTGTGAC+CGG | + | tig0003352:21821-21840 | None:intergenic | 45.0% | |
| GGTCTCATATTTGAGCCTAG+TGG | + | tig0003352:21986-22005 | None:intergenic | 45.0% | |
| TTACGTCACTCCATTGGCAT+GGG | + | tig0003352:22802-22821 | None:intergenic | 45.0% | |
| TTTACGTCACTCCATTGGCA+TGG | + | tig0003352:22803-22822 | None:intergenic | 45.0% | |
| AAAGAGTGAAAGTCAGCGTG+AGG | - | tig0003352:23037-23056 | Msa1339530:intron | 45.0% | |
| TTGCGATTCTGTCTCATGTG+TGG | - | tig0003352:23153-23172 | Msa1339530:intron | 45.0% | |
| TGCGATTCTGTCTCATGTGT+GGG | - | tig0003352:23154-23173 | Msa1339530:intron | 45.0% | |
| CTCATCTCAGAAACATGTCG+TGG | - | tig0003352:23721-23740 | Msa1339530:intron | 45.0% | |
| ATCTCAGAAACATGTCGTGG+TGG | - | tig0003352:23724-23743 | Msa1339530:intron | 45.0% | |
| !! | GATGGTGGTACTTCCACTTT+TGG | - | tig0003352:24043-24062 | Msa1339530:intron | 45.0% |
| TCTGAAAGCTGACCCAAAAG+TGG | + | tig0003352:24059-24078 | None:intergenic | 45.0% | |
| GGTCAGCTTTCAGATGAACA+CGG | - | tig0003352:24065-24084 | Msa1339530:intron | 45.0% | |
| CAAATCTATGAGGAATGCCG+CGG | - | tig0003352:24895-24914 | Msa1339530:intron | 45.0% | |
| CCGCGGAAATAGTAATCTTC+AGG | - | tig0003352:18815-18834 | Msa1339530:intron | 45.0% | |
| CAGCAAAACACTGTGTATGC+CGG | + | tig0003352:25071-25090 | None:intergenic | 45.0% | |
| !! | CTTCTGATGATGGTCGGAAT+TGG | - | tig0003352:19195-19214 | Msa1339530:intron | 45.0% |
| CATCAGTATGGAGGGATCAA+AGG | + | tig0003352:19264-19283 | None:intergenic | 45.0% | |
| !! | CTTGGCTTTCTGGATTAGCA+TGG | - | tig0003352:19558-19577 | Msa1339530:intron | 45.0% |
| ATGCAGGTACCATACTTAGG+TGG | - | tig0003352:25783-25802 | Msa1339530:intron | 45.0% | |
| CCAAATGAGCCACCTAAGTA+TGG | + | tig0003352:25795-25814 | None:intergenic | 45.0% | |
| CCATACTTAGGTGGCTCATT+TGG | - | tig0003352:25792-25811 | Msa1339530:intron | 45.0% | |
| TACTCACAGCAGGTTTCTCA+AGG | + | tig0003352:25830-25849 | None:intergenic | 45.0% | |
| TAATGGCAATACCAGGAGTC+AGG | + | tig0003352:25916-25935 | None:intergenic | 45.0% | |
| AGCATCAAGCTCAACCAATC+AGG | - | tig0003352:20227-20246 | Msa1339530:intron | 45.0% | |
| GCTGGGGCAAATTCAATATC+TGG | - | tig0003352:26136-26155 | Msa1339530:intron | 45.0% | |
| !! | TGAGTCCTTTGACTTGTGAG+TGG | - | tig0003352:20464-20483 | Msa1339530:intron | 45.0% |
| TTATAGTACTCCCTCCGTCT+CGG | - | tig0003352:26252-26271 | Msa1339530:intron | 45.0% | |
| ATGGGTCAGTTATTCCGAGA+CGG | + | tig0003352:26269-26288 | None:intergenic | 45.0% | |
| TTTGCGATGAGCAGATTTGC+TGG | + | tig0003352:26579-26598 | None:intergenic | 45.0% | |
| ATGCAGACACAATTTGCCAG+GGG | + | tig0003352:26661-26680 | None:intergenic | 45.0% | |
| CATGCAGACACAATTTGCCA+GGG | + | tig0003352:26662-26681 | None:intergenic | 45.0% | |
| TCATGCAGACACAATTTGCC+AGG | + | tig0003352:26663-26682 | None:intergenic | 45.0% | |
| TTAATCCCTGGCAATTTCCC+TGG | + | tig0003352:26751-26770 | None:intergenic | 45.0% | |
| GTGGTTGTTCTCTAGTGTTG+AGG | + | tig0003352:27673-27692 | None:intergenic | 45.0% | |
| AGTTCCCTCTGGTCTCAAAT+GGG | + | tig0003352:27702-27721 | None:intergenic | 45.0% | |
| TAGTTCCCTCTGGTCTCAAA+TGG | + | tig0003352:27703-27722 | None:intergenic | 45.0% | |
| GTTATTGCCTTAGTCGCTTC+AGG | + | tig0003352:27792-27811 | None:intergenic | 45.0% | |
| CTCTCAACTCTGATGGTTCA+CGG | - | tig0003352:28075-28094 | Msa1339530:intron | 45.0% | |
| AGCGAACTGTCAGTTTGTAC+AGG | - | tig0003352:28579-28598 | Msa1339530:intron | 45.0% | |
| TTGTGTCTGCAGAGAGAACT+CGG | - | tig0003352:29435-29454 | Msa1339530:CDS | 45.0% | |
| ! | TGGTGGATCCATCTGTATGA+TGG | + | tig0003352:29621-29640 | None:intergenic | 45.0% |
| !! | TACAAATGGGTTTTCCGGAG+CGG | - | tig0003352:29822-29841 | Msa1339530:intron | 45.0% |
| CCCCCAATTTATTTCGGGAT+TGG | + | tig0003352:29909-29928 | None:intergenic | 45.0% | |
| CAAATGAGGTCAATGGTAGC+CGG | - | tig0003352:29977-29996 | Msa1339530:CDS | 45.0% | |
| TAGCCGGAAAGTAAGAGAGA+AGG | - | tig0003352:29993-30012 | Msa1339530:CDS | 45.0% | |
| CCACCTTCTCTCTTACTTTC+CGG | + | tig0003352:29999-30018 | None:intergenic | 45.0% | |
| AAGTAACTGTGGCTGGAAGT+TGG | - | tig0003352:30133-30152 | Msa1339530:intron | 45.0% | |
| CGTTCCCTTTCAATTTGCCA+GGG | - | tig0003352:30356-30375 | Msa1339530:intron | 45.0% | |
| GTTCCCTTTCAATTTGCCAG+GGG | - | tig0003352:30357-30376 | Msa1339530:intron | 45.0% | |
| TTCCCTTTCAATTTGCCAGG+GGG | - | tig0003352:30358-30377 | Msa1339530:intron | 45.0% | |
| ATCCCCCTGGCAAATTGAAA+GGG | + | tig0003352:30363-30382 | None:intergenic | 45.0% | |
| AATCCCCCTGGCAAATTGAA+AGG | + | tig0003352:30364-30383 | None:intergenic | 45.0% | |
| TATTGCCAGGGAATAATGCC+AGG | + | tig0003352:30428-30447 | None:intergenic | 45.0% | |
| ATATTGTACTACCTCGGTCC+CGG | + | tig0003352:30476-30495 | None:intergenic | 45.0% | |
| CTTTGCATTCAAAGGGAGCA+TGG | + | tig0003352:20580-20599 | None:intergenic | 45.0% | |
| CATGCTCCCTTTGAATGCAA+AGG | - | tig0003352:30535-30554 | Msa1339530:intron | 45.0% | |
| ! | AATTCAGAAGCGGGTCTTGT+TGG | + | tig0003352:30780-30799 | None:intergenic | 45.0% |
| !! | AAAAAGATTTATAATAAATA+AGG | - | tig0003352:22175-22194 | Msa1339530:intron | 5.0% |
| !! | AAAAGATTTATAATAAATAA+GGG | - | tig0003352:22176-22195 | Msa1339530:intron | 5.0% |
| !!! | TTTTTTAAATACTTTTTTTA+AGG | - | tig0003352:22855-22874 | Msa1339530:intron | 5.0% |
| !!! | TTTTTAAATACTTTTTTTAA+GGG | - | tig0003352:22856-22875 | Msa1339530:intron | 5.0% |
| !! | AAATAAAAGTTATAAATATT+GGG | - | tig0003352:27546-27565 | Msa1339530:intron | 5.0% |
| !! | TGTTAAAAAAAATAAAATAA+AGG | - | tig0003352:30270-30289 | Msa1339530:intron | 5.0% |
| !! | GTTAAAAAAAATAAAATAAA+GGG | - | tig0003352:30271-30290 | Msa1339530:intron | 5.0% |
| !! | TTAAAAAAAATAAAATAAAG+GGG | - | tig0003352:30272-30291 | Msa1339530:intron | 5.0% |
| ! | GGAGTGGATTCTTTGAGCTG+AGG | - | tig0003352:17465-17484 | Msa1339530:CDS | 50.0% |
| GGCCAGCTTTCAGATGAACA+TGG | - | tig0003352:17760-17779 | Msa1339530:intron | 50.0% | |
| !! | TGGTGGTGGACATGGTAACA+AGG | + | tig0003352:17801-17820 | None:intergenic | 50.0% |
| TGACAACATCTGCCTGACAG+AGG | + | tig0003352:18427-18446 | None:intergenic | 50.0% | |
| CCCACAAAGAACCGAGAGTT+AGG | - | tig0003352:18736-18755 | Msa1339530:intron | 50.0% | |
| GCCTAACTCTCGGTTCTTTG+TGG | + | tig0003352:18740-18759 | None:intergenic | 50.0% | |
| ! | TTGGTGTAGGCTTGGCTTTC+TGG | - | tig0003352:19548-19567 | Msa1339530:intron | 50.0% |
| !! | TGGATTAGCATGGGCACCTT+GGG | - | tig0003352:19568-19587 | Msa1339530:intron | 50.0% |
| GTGAGGGATAATGCTCTTGG+TGG | + | tig0003352:20318-20337 | None:intergenic | 50.0% | |
| ! | GCTAGTGAGGAAGTGTGTGT+TGG | + | tig0003352:21290-21309 | None:intergenic | 50.0% |
| ! | TGGCACTCCTTTTGCTAGTG+AGG | + | tig0003352:21303-21322 | None:intergenic | 50.0% |
| TGTTGGGGGGCTTAACCATT+TGG | + | tig0003352:21415-21434 | None:intergenic | 50.0% | |
| !! | CAGTTGTGTGTTGGTGGTTG+CGG | + | tig0003352:21747-21766 | None:intergenic | 50.0% |
| GACAACCAGTTGTGTGTTGG+TGG | + | tig0003352:21753-21772 | None:intergenic | 50.0% | |
| CACCGTGAGCTTAGCTCAAT+TGG | - | tig0003352:22376-22395 | Msa1339530:intron | 50.0% | |
| CATGGATCCGGCAAATCACT+TGG | + | tig0003352:22570-22589 | None:intergenic | 50.0% | |
| GATCGCCCTTCCATTTCTTG+AGG | + | tig0003352:22740-22759 | None:intergenic | 50.0% | |
| GGGACATGGCATACATGGAT+CGG | + | tig0003352:22782-22801 | None:intergenic | 50.0% | |
| TATGCCATGTCCCATGCCAA+TGG | - | tig0003352:22789-22808 | Msa1339530:CDS | 50.0% | |
| GAGACAGAATCGCAACTCCT+CGG | + | tig0003352:23148-23167 | None:intergenic | 50.0% | |
| ! | AGAAACATGTCGTGGTGGAG+TGG | - | tig0003352:23729-23748 | Msa1339530:intron | 50.0% |
| CTGCATTTCTGTCGCGTATG+TGG | - | tig0003352:24420-24439 | Msa1339530:CDS | 50.0% | |
| TTTCTGTCGCGTATGTGGTG+AGG | - | tig0003352:24425-24444 | Msa1339530:CDS | 50.0% | |
| ! | CGGCATACACAGTGTTTTGC+TGG | - | tig0003352:25069-25088 | Msa1339530:intron | 50.0% |
| ! | TTGGTGTAGGCTTGGCTTTC+TGG | - | tig0003352:19548-19567 | Msa1339530:intron | 50.0% |
| !! | TGGATTAGCATGGGCACCTT+GGG | - | tig0003352:19568-19587 | Msa1339530:intron | 50.0% |
| GAATCAATGGTCCTGACTCC+TGG | - | tig0003352:25902-25921 | Msa1339530:intron | 50.0% | |
| GTCAGTTATTCCGAGACGGA+GGG | + | tig0003352:26265-26284 | None:intergenic | 50.0% | |
| TGGCAAACGTCCATTTGCCA+AGG | + | tig0003352:26532-26551 | None:intergenic | 50.0% | |
| TTGGCAAATGGACGTTTGCC+AGG | - | tig0003352:26531-26550 | Msa1339530:intron | 50.0% | |
| AACATGCCAGGGAAATTGCC+AGG | - | tig0003352:26742-26761 | Msa1339530:intron | 50.0% | |
| ACATGCCAGGGAAATTGCCA+GGG | - | tig0003352:26743-26762 | Msa1339530:intron | 50.0% | |
| AATTGCCAGGGATTAACCCC+TGG | - | tig0003352:26755-26774 | Msa1339530:intron | 50.0% | |
| ! | TTTTGCCAGGGGTTAATCCC+TGG | + | tig0003352:26763-26782 | None:intergenic | 50.0% |
| CGTGAACCATCAGAGTTGAG+AGG | + | tig0003352:28077-28096 | None:intergenic | 50.0% | |
| GAAGAACCAAGCAGACAGGT+TGG | - | tig0003352:28503-28522 | Msa1339530:intron | 50.0% | |
| AGCATTCCAACCTGTCTGCT+TGG | + | tig0003352:28512-28531 | None:intergenic | 50.0% | |
| ! | AAGTGCATTTTGCCGAGAGC+TGG | + | tig0003352:28807-28826 | None:intergenic | 50.0% |
| !!! | TTTTGGTTGGTGGAGACGAG+CGG | + | tig0003352:28842-28861 | None:intergenic | 50.0% |
| GGATTGGAGAACTTTGACCG+AGG | + | tig0003352:29893-29912 | None:intergenic | 50.0% | |
| CGGCTACCATTGACCTCATT+TGG | + | tig0003352:29979-29998 | None:intergenic | 50.0% | |
| CCGGAAAGTAAGAGAGAAGG+TGG | - | tig0003352:29996-30015 | Msa1339530:CDS | 50.0% | |
| GTCGGACTGAGAAGTAACTG+TGG | - | tig0003352:30122-30141 | Msa1339530:intron | 50.0% | |
| GACTGAGAAGTAACTGTGGC+TGG | - | tig0003352:30126-30145 | Msa1339530:intron | 50.0% | |
| TAACTGTGGCTGGAAGTTGG+TGG | - | tig0003352:30136-30155 | Msa1339530:intron | 50.0% | |
| !! | GTTGGTGGTGGTGGTTATCA+TGG | - | tig0003352:30151-30170 | Msa1339530:intron | 50.0% |
| !!! | AGCGTACGGTGCTGTTGTTT+TGG | - | tig0003352:30188-30207 | Msa1339530:intron | 50.0% |
| GCGTTCCCTTTCAATTTGCC+AGG | - | tig0003352:30355-30374 | Msa1339530:intron | 50.0% | |
| ATTTGCCAGGAGCTAAGCCA+GGG | + | tig0003352:30387-30406 | None:intergenic | 50.0% | |
| AATTTGCCAGGAGCTAAGCC+AGG | + | tig0003352:30388-30407 | None:intergenic | 50.0% | |
| TAGCTCCTGGCAAATTTGCC+AGG | - | tig0003352:30392-30411 | Msa1339530:intron | 50.0% | |
| GAACTCCTGGCAAATTTGCC+AGG | + | tig0003352:30400-30419 | None:intergenic | 50.0% | |
| TTGCTCCTGGCATTATTCCC+TGG | - | tig0003352:30420-30439 | Msa1339530:intron | 50.0% | |
| TAGTGATTATACCGGGACCG+AGG | - | tig0003352:30462-30481 | Msa1339530:CDS | 50.0% | |
| CTGCATCTCTGTCGCGTATG+TGG | - | tig0003352:18324-18343 | Msa1339530:intron | 55.0% | |
| !! | CTGGATTAGCATGGGCACCT+TGG | - | tig0003352:19567-19586 | Msa1339530:intron | 55.0% |
| CAACACAGAAGACCCGCTTC+TGG | - | tig0003352:20799-20818 | Msa1339530:intron | 55.0% | |
| CGCAACCACCAACACACAAC+TGG | - | tig0003352:21745-21764 | Msa1339530:intron | 55.0% | |
| ! | CTGTGACCGGCTTCCTACAA+AGG | + | tig0003352:21808-21827 | None:intergenic | 55.0% |
| GGCATGGGACATGGCATACA+TGG | + | tig0003352:22787-22806 | None:intergenic | 55.0% | |
| CACTCCATTGGCATGGGACA+TGG | + | tig0003352:22796-22815 | None:intergenic | 55.0% | |
| CCTGGTTGCGTACCTGTTTG+CGG | - | tig0003352:23194-23213 | Msa1339530:CDS | 55.0% | |
| CTGGTTGCGTACCTGTTTGC+GGG | - | tig0003352:23195-23214 | Msa1339530:CDS | 55.0% | |
| TGGTTGCGTACCTGTTTGCG+GGG | - | tig0003352:23196-23215 | Msa1339530:CDS | 55.0% | |
| CAGTCCTGCATTAAGAGGCG+TGG | - | tig0003352:25012-25031 | Msa1339530:intron | 55.0% | |
| AGAGCCACGCCTCTTAATGC+AGG | + | tig0003352:25019-25038 | None:intergenic | 55.0% | |
| !! | CTGGATTAGCATGGGCACCT+TGG | - | tig0003352:19567-19586 | Msa1339530:intron | 55.0% |
| GGTCAGTTATTCCGAGACGG+AGG | + | tig0003352:26266-26285 | None:intergenic | 55.0% | |
| ! | CGTTTGCCAGGAGTTTTGCC+AGG | - | tig0003352:26543-26562 | Msa1339530:intron | 55.0% |
| TCTGCTCCTGGCAAAACTCC+TGG | + | tig0003352:26552-26571 | None:intergenic | 55.0% | |
| TTTGCTGGCGATTCTGCTCC+TGG | + | tig0003352:26564-26583 | None:intergenic | 55.0% | |
| TCATCGCAAATGACCCTGCC+AGG | - | tig0003352:26589-26608 | Msa1339530:intron | 55.0% | |
| CATCGCAAATGACCCTGCCA+GGG | - | tig0003352:26590-26609 | Msa1339530:intron | 55.0% | |
| ATCGCAAATGACCCTGCCAG+GGG | - | tig0003352:26591-26610 | Msa1339530:intron | 55.0% | |
| TTTGCCAGGAGCTAAACCCC+TGG | + | tig0003352:26610-26629 | None:intergenic | 55.0% | |
| ATTTGCCAGGGGTTGAGCCA+GGG | + | tig0003352:26650-26669 | None:intergenic | 55.0% | |
| AATTTGCCAGGGGTTGAGCC+AGG | + | tig0003352:26651-26670 | None:intergenic | 55.0% | |
| GGTCTCAAATGGGAGGGTAG+TGG | + | tig0003352:27692-27711 | None:intergenic | 55.0% | |
| ! | ACCCTCCCATTTGAGACCAG+AGG | - | tig0003352:27694-27713 | Msa1339530:intron | 55.0% |
| CCCTCTGGTCTCAAATGGGA+GGG | + | tig0003352:27698-27717 | None:intergenic | 55.0% | |
| ! | CCCTCCCATTTGAGACCAGA+GGG | - | tig0003352:27695-27714 | Msa1339530:intron | 55.0% |
| TCCCTCTGGTCTCAAATGGG+AGG | + | tig0003352:27699-27718 | None:intergenic | 55.0% | |
| !! | AAATGGGTTTTCCGGAGCGG+CGG | - | tig0003352:29825-29844 | Msa1339530:intron | 55.0% |
| GGAAACCTCAACAGCCGTAC+CGG | + | tig0003352:29859-29878 | None:intergenic | 55.0% | |
| GGCTGTTGAGGTTTCCGACT+CGG | - | tig0003352:29863-29882 | Msa1339530:intron | 55.0% | |
| !! | TGTTGAGGTTTCCGACTCGG+TGG | - | tig0003352:29866-29885 | Msa1339530:intron | 55.0% |
| ! | GGTTGTGGTGGGGTTGTCAA+AGG | - | tig0003352:30097-30116 | Msa1339530:intron | 55.0% |
| ! | TGTGGTGGGGTTGTCAAAGG+AGG | - | tig0003352:30100-30119 | Msa1339530:intron | 55.0% |
| GTGGGGTTGTCAAAGGAGGT+CGG | - | tig0003352:30104-30123 | Msa1339530:intron | 55.0% | |
| GGGCTGCTTGCAATTTGCGA+GGG | - | tig0003352:30309-30328 | Msa1339530:intron | 55.0% | |
| GGCTGCTTGCAATTTGCGAG+GGG | - | tig0003352:30310-30329 | Msa1339530:intron | 55.0% | |
| AATTTGCCAGGGGGATTCCC+TGG | - | tig0003352:30367-30386 | Msa1339530:intron | 55.0% | |
| TTGCCAGGAGTTCTTGCTCC+TGG | - | tig0003352:30407-30426 | Msa1339530:intron | 55.0% | |
| ATGCCAGGAGCAAGAACTCC+TGG | + | tig0003352:30413-30432 | None:intergenic | 55.0% | |
| TGGTTGCGGCATGGAGGAAG+CGG | + | tig0003352:21733-21752 | None:intergenic | 60.0% | |
| !! | TGTTGGTGGTTGCGGCATGG+AGG | + | tig0003352:21739-21758 | None:intergenic | 60.0% |
| !! | GTGTGTTGGTGGTTGCGGCA+TGG | + | tig0003352:21742-21761 | None:intergenic | 60.0% |
| GCAAGAGCGAGTGTAGCACG+TGG | - | tig0003352:23059-23078 | Msa1339530:intron | 60.0% | |
| CCGCAAACAGGTACGCAACC+AGG | + | tig0003352:23197-23216 | None:intergenic | 60.0% | |
| GTACCTGTTTGCGGGGTGCA+TGG | - | tig0003352:23203-23222 | Msa1339530:CDS | 60.0% | |
| CTTGGCTTACACTCCGCGCA+CGG | + | tig0003352:23231-23250 | None:intergenic | 60.0% | |
| TTTGCCAGGGGCAGAAACCC+TGG | - | tig0003352:26492-26511 | Msa1339530:intron | 60.0% | |
| TTTGCCAGGGTTTCTGCCCC+TGG | + | tig0003352:26499-26518 | None:intergenic | 60.0% | |
| CAGGAGCTAAACCCCTGGCA+GGG | + | tig0003352:26605-26624 | None:intergenic | 60.0% | |
| GAACTCCGGTACGGCTGTTG+AGG | - | tig0003352:29851-29870 | Msa1339530:intron | 60.0% | |
| !! | GTTTCCGACTCGGTGGTCCT+CGG | - | tig0003352:29873-29892 | Msa1339530:intron | 60.0% |
| TTGACCGAGGACCACCGAGT+CGG | + | tig0003352:29880-29899 | None:intergenic | 60.0% | |
| !! | CTGTGGCTGGAAGTTGGTGG+TGG | - | tig0003352:30139-30158 | Msa1339530:intron | 60.0% |
| !! | TGGCTGGAAGTTGGTGGTGG+TGG | - | tig0003352:30142-30161 | Msa1339530:intron | 60.0% |
| CGCAAATTGCAAGCAGCCCC+TGG | + | tig0003352:30308-30327 | None:intergenic | 60.0% | |
| GGGGCTGCTTGCAATTTGCG+AGG | - | tig0003352:30308-30327 | Msa1339530:intron | 60.0% | |
| GGATTCCCTGGCTTAGCTCC+TGG | - | tig0003352:30379-30398 | Msa1339530:intron | 60.0% | |
| TTGCGGCATGGAGGAAGCGG+TGG | + | tig0003352:21730-21749 | None:intergenic | 65.0% | |
| !! | ACCAGGCGCATGGTGCTGCA+CGG | + | tig0003352:23180-23199 | None:intergenic | 65.0% |
| CAGGTACGCAACCAGGCGCA+TGG | + | tig0003352:23190-23209 | None:intergenic | 65.0% | |
| GTGCCATGCACCCCGCAAAC+AGG | + | tig0003352:23209-23228 | None:intergenic | 65.0% | |
| CCAGGAGCTAAACCCCTGGC+AGG | + | tig0003352:26606-26625 | None:intergenic | 65.0% | |
| ! | CCTGCCAGGGGTTTAGCTCC+TGG | - | tig0003352:26603-26622 | Msa1339530:intron | 65.0% |
| GCTCCTGGCAAATGCGCTCC+TGG | - | tig0003352:26618-26637 | Msa1339530:intron | 65.0% | |
| ! | GTGCCAGGAGCGCATTTGCC+AGG | + | tig0003352:26624-26643 | None:intergenic | 65.0% |
| GTTGAGCCAGGGCTTGTGCC+AGG | + | tig0003352:26639-26658 | None:intergenic | 65.0% | |
| ACAAGCCCTGGCTCAACCCC+TGG | - | tig0003352:26642-26661 | Msa1339530:intron | 65.0% | |
| GCAGCGGCCTGAAGCGACTA+AGG | - | tig0003352:27782-27801 | Msa1339530:intron | 65.0% | |
| GCTAAGCCAGGGAATCCCCC+TGG | + | tig0003352:30376-30395 | None:intergenic | 65.0% | |
| TGCGCTCCTGGCACAAGCCC+TGG | - | tig0003352:26630-26649 | Msa1339530:intron | 70.0% | |
| CGGCGGCAGGAACTCCGGTA+CGG | - | tig0003352:29842-29861 | Msa1339530:intron | 70.0% | |
| GCCGTGCAGCACCATGCGCC+TGG | - | tig0003352:23176-23195 | Msa1339530:CDS | 75.0% | |
| GGGGTGCATGGCACCGTGCG+CGG | - | tig0003352:23215-23234 | Msa1339530:CDS | 75.0% | |
| ! | GGGTTTTCCGGAGCGGCGGC+AGG | - | tig0003352:29829-29848 | Msa1339530:intron | 75.0% |
| CGGAGTTCCTGCCGCCGCTC+CGG | + | tig0003352:29839-29858 | None:intergenic | 75.0% | |
| CGGAGCGGCGGCAGGAACTC+CGG | - | tig0003352:29837-29856 | Msa1339530:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0003352 | gene | 17455 | 30807 | 17455 | ID=Msa1339530;Name=Msa1339530 |
| tig0003352 | mRNA | 17455 | 30807 | 17455 | ID=Msa1339530-mRNA-1;Parent=Msa1339530;Name=Msa1339530-mRNA-1;_AED=0.20;_eAED=0.21;_QI=0|0.37|0.24|1|0.87|0.92|25|0|796 |
| tig0003352 | exon | 30625 | 30807 | 30625 | ID=Msa1339530-mRNA-1:exon:2212;Parent=Msa1339530-mRNA-1 |
| tig0003352 | exon | 30430 | 30541 | 30430 | ID=Msa1339530-mRNA-1:exon:2211;Parent=Msa1339530-mRNA-1 |
| tig0003352 | exon | 29917 | 30029 | 29917 | ID=Msa1339530-mRNA-1:exon:2210;Parent=Msa1339530-mRNA-1 |
| tig0003352 | exon | 29706 | 29828 | 29706 | ID=Msa1339530-mRNA-1:exon:2209;Parent=Msa1339530-mRNA-1 |
| tig0003352 | exon | 29426 | 29598 | 29426 | ID=Msa1339530-mRNA-1:exon:2208;Parent=Msa1339530-mRNA-1 |
| tig0003352 | exon | 29228 | 29303 | 29228 | ID=Msa1339530-mRNA-1:exon:2207;Parent=Msa1339530-mRNA-1 |
| tig0003352 | exon | 29029 | 29115 | 29029 | ID=Msa1339530-mRNA-1:exon:2206;Parent=Msa1339530-mRNA-1 |
| tig0003352 | exon | 28789 | 28869 | 28789 | ID=Msa1339530-mRNA-1:exon:2205;Parent=Msa1339530-mRNA-1 |
| tig0003352 | exon | 28673 | 28705 | 28673 | ID=Msa1339530-mRNA-1:exon:2204;Parent=Msa1339530-mRNA-1 |
| tig0003352 | exon | 28014 | 28055 | 28014 | ID=Msa1339530-mRNA-1:exon:2203;Parent=Msa1339530-mRNA-1 |
| tig0003352 | exon | 27784 | 27862 | 27784 | ID=Msa1339530-mRNA-1:exon:2202;Parent=Msa1339530-mRNA-1 |
| tig0003352 | exon | 27640 | 27685 | 27640 | ID=Msa1339530-mRNA-1:exon:2201;Parent=Msa1339530-mRNA-1 |
| tig0003352 | exon | 24345 | 24531 | 24345 | ID=Msa1339530-mRNA-1:exon:2200;Parent=Msa1339530-mRNA-1 |
| tig0003352 | exon | 24125 | 24236 | 24125 | ID=Msa1339530-mRNA-1:exon:2199;Parent=Msa1339530-mRNA-1 |
| tig0003352 | exon | 23821 | 23933 | 23821 | ID=Msa1339530-mRNA-1:exon:2198;Parent=Msa1339530-mRNA-1 |
| tig0003352 | exon | 23611 | 23733 | 23611 | ID=Msa1339530-mRNA-1:exon:2197;Parent=Msa1339530-mRNA-1 |
| tig0003352 | exon | 23329 | 23501 | 23329 | ID=Msa1339530-mRNA-1:exon:2196;Parent=Msa1339530-mRNA-1 |
| tig0003352 | exon | 23172 | 23247 | 23172 | ID=Msa1339530-mRNA-1:exon:2195;Parent=Msa1339530-mRNA-1 |
| tig0003352 | exon | 22963 | 23049 | 22963 | ID=Msa1339530-mRNA-1:exon:2194;Parent=Msa1339530-mRNA-1 |
| tig0003352 | exon | 22746 | 22826 | 22746 | ID=Msa1339530-mRNA-1:exon:2193;Parent=Msa1339530-mRNA-1 |
| tig0003352 | exon | 22630 | 22662 | 22630 | ID=Msa1339530-mRNA-1:exon:2192;Parent=Msa1339530-mRNA-1 |
| tig0003352 | exon | 22420 | 22473 | 22420 | ID=Msa1339530-mRNA-1:exon:2191;Parent=Msa1339530-mRNA-1 |
| tig0003352 | exon | 22266 | 22307 | 22266 | ID=Msa1339530-mRNA-1:exon:2190;Parent=Msa1339530-mRNA-1 |
| tig0003352 | exon | 22088 | 22147 | 22088 | ID=Msa1339530-mRNA-1:exon:2189;Parent=Msa1339530-mRNA-1 |
| tig0003352 | exon | 17455 | 17556 | 17455 | ID=Msa1339530-mRNA-1:exon:2188;Parent=Msa1339530-mRNA-1 |
| tig0003352 | CDS | 30625 | 30807 | 30625 | ID=Msa1339530-mRNA-1:cds;Parent=Msa1339530-mRNA-1 |
| tig0003352 | CDS | 30430 | 30541 | 30430 | ID=Msa1339530-mRNA-1:cds;Parent=Msa1339530-mRNA-1 |
| tig0003352 | CDS | 29917 | 30029 | 29917 | ID=Msa1339530-mRNA-1:cds;Parent=Msa1339530-mRNA-1 |
| tig0003352 | CDS | 29706 | 29828 | 29706 | ID=Msa1339530-mRNA-1:cds;Parent=Msa1339530-mRNA-1 |
| tig0003352 | CDS | 29426 | 29598 | 29426 | ID=Msa1339530-mRNA-1:cds;Parent=Msa1339530-mRNA-1 |
| tig0003352 | CDS | 29228 | 29303 | 29228 | ID=Msa1339530-mRNA-1:cds;Parent=Msa1339530-mRNA-1 |
| tig0003352 | CDS | 29029 | 29115 | 29029 | ID=Msa1339530-mRNA-1:cds;Parent=Msa1339530-mRNA-1 |
| tig0003352 | CDS | 28789 | 28869 | 28789 | ID=Msa1339530-mRNA-1:cds;Parent=Msa1339530-mRNA-1 |
| tig0003352 | CDS | 28673 | 28705 | 28673 | ID=Msa1339530-mRNA-1:cds;Parent=Msa1339530-mRNA-1 |
| tig0003352 | CDS | 28014 | 28055 | 28014 | ID=Msa1339530-mRNA-1:cds;Parent=Msa1339530-mRNA-1 |
| tig0003352 | CDS | 27784 | 27862 | 27784 | ID=Msa1339530-mRNA-1:cds;Parent=Msa1339530-mRNA-1 |
| tig0003352 | CDS | 27640 | 27685 | 27640 | ID=Msa1339530-mRNA-1:cds;Parent=Msa1339530-mRNA-1 |
| tig0003352 | CDS | 24345 | 24531 | 24345 | ID=Msa1339530-mRNA-1:cds;Parent=Msa1339530-mRNA-1 |
| tig0003352 | CDS | 24125 | 24236 | 24125 | ID=Msa1339530-mRNA-1:cds;Parent=Msa1339530-mRNA-1 |
| tig0003352 | CDS | 23821 | 23933 | 23821 | ID=Msa1339530-mRNA-1:cds;Parent=Msa1339530-mRNA-1 |
| tig0003352 | CDS | 23611 | 23733 | 23611 | ID=Msa1339530-mRNA-1:cds;Parent=Msa1339530-mRNA-1 |
| tig0003352 | CDS | 23329 | 23501 | 23329 | ID=Msa1339530-mRNA-1:cds;Parent=Msa1339530-mRNA-1 |
| tig0003352 | CDS | 23172 | 23247 | 23172 | ID=Msa1339530-mRNA-1:cds;Parent=Msa1339530-mRNA-1 |
| tig0003352 | CDS | 22963 | 23049 | 22963 | ID=Msa1339530-mRNA-1:cds;Parent=Msa1339530-mRNA-1 |
| tig0003352 | CDS | 22746 | 22826 | 22746 | ID=Msa1339530-mRNA-1:cds;Parent=Msa1339530-mRNA-1 |
| tig0003352 | CDS | 22630 | 22662 | 22630 | ID=Msa1339530-mRNA-1:cds;Parent=Msa1339530-mRNA-1 |
| tig0003352 | CDS | 22420 | 22473 | 22420 | ID=Msa1339530-mRNA-1:cds;Parent=Msa1339530-mRNA-1 |
| tig0003352 | CDS | 22266 | 22307 | 22266 | ID=Msa1339530-mRNA-1:cds;Parent=Msa1339530-mRNA-1 |
| tig0003352 | CDS | 22088 | 22147 | 22088 | ID=Msa1339530-mRNA-1:cds;Parent=Msa1339530-mRNA-1 |
| tig0003352 | CDS | 17455 | 17556 | 17455 | ID=Msa1339530-mRNA-1:cds;Parent=Msa1339530-mRNA-1 |
| Gene Sequence |
| Protein sequence |
