AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0268150


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0268150 MtrunA17_Chr2g0285411 99.338 302 2 0 1 302 1 302 0.0 629
Msa0268150 MtrunA17_Chr8g0342441 40.351 285 146 10 15 298 58 319 3.87e-57 187
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0268150 AT1G30300.1 75.410 305 72 1 1 302 2 306 4.68e-178 495
Msa0268150 AT1G30300.3 75.410 305 72 1 1 302 2 306 4.68e-178 495
Msa0268150 AT1G30300.2 75.410 305 72 1 1 302 2 306 4.68e-178 495
Msa0268150 AT1G30300.4 75.410 305 72 1 1 302 2 306 4.68e-178 495
Msa0268150 AT4G03610.4 64.821 307 96 5 1 302 1 300 4.31e-142 404
Msa0268150 AT4G03610.2 64.111 287 91 5 1 282 1 280 9.65e-130 372
Msa0268150 AT4G03610.1 61.564 307 91 6 1 302 1 285 6.42e-129 370
Msa0268150 AT4G03610.3 66.008 253 76 4 1 250 1 246 6.28e-117 337
Msa0268150 AT3G13800.1 40.493 284 146 10 16 298 78 339 3.92e-53 178
Msa0268150 AT3G13800.4 40.493 284 146 10 16 298 78 339 3.92e-53 178
Msa0268150 AT3G13800.3 40.502 279 143 10 21 298 1 257 9.20e-52 172
Msa0268150 AT3G13800.2 40.502 279 143 10 21 298 1 257 9.20e-52 172

Find 101 sgRNAs with CRISPR-Local

Find 388 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAAGAGAAGTTTCCTTATT+TGG 0.135750 2_2:-70088493 Msa0268150:CDS
GAAAGAGAGTACCTGTAATT+AGG 0.152242 2_2:+70090665 None:intergenic
TCTTTCTCTCTCATCTCTTC+TGG 0.177721 2_2:-70090874 Msa0268150:five_prime_UTR
CGTTGTTTCTGAACCAAATA+AGG 0.179452 2_2:+70088480 None:intergenic
ATATCATTTGTTGGACTAAA+AGG 0.183530 2_2:+70089465 None:intergenic
ACAGTTGGATCTTCTAATAT+TGG 0.247221 2_2:-70087950 Msa0268150:CDS
GGGCATCTTTGAAAATATTA+AGG 0.254973 2_2:+70085521 None:intergenic
CCTAGGTTTGCTTTAGAAAC+TGG 0.258915 2_2:+70085500 None:intergenic
TAATATTGGATTCATTATAT+AGG 0.272370 2_2:-70087936 Msa0268150:CDS
AAAAGATTACATCTCTAATT+AGG 0.275025 2_2:+70085251 None:intergenic
TACATCTCTAATTAGGATAT+TGG 0.285182 2_2:+70085258 None:intergenic
TTGATGTTGGCAAGACGTTT+AGG 0.306067 2_2:-70090503 Msa0268150:CDS
TTGATCTTATTTAGATTCAT+TGG 0.307127 2_2:-70085546 Msa0268150:exon
TAAATAAGATCAACTGTATA+TGG 0.310412 2_2:+70085556 None:intergenic
TGACCCTGCAAAAGATTCTT+AGG 0.311116 2_2:+70085295 None:intergenic
TAACTCACAGAATCGATTCT+TGG 0.317245 2_2:+70090444 None:intergenic
AATATTGGATTCATTATATA+GGG 0.318957 2_2:-70087935 Msa0268150:intron
CAGCAAAACTGTTGGTTCCT+AGG 0.324849 2_2:+70085483 None:intergenic
AAAGAGAGTACCTGTAATTA+GGG 0.331055 2_2:+70090666 None:intergenic
CGGAACAGGCTGTTCAAGTA+TGG 0.338495 2_2:-70090774 Msa0268150:CDS
TGAATGCTGACTCAGGTAGA+TGG 0.349627 2_2:+70089431 None:intergenic
TGGAGAGGATTACATCTGTT+TGG 0.350777 2_2:-70088258 Msa0268150:CDS
TGATGTTGGCAAGACGTTTA+GGG 0.356782 2_2:-70090502 Msa0268150:CDS
CATGAGTCATTCCAATCAAT+AGG 0.362542 2_2:+70086706 None:intergenic
GGAGAGGATTACATCTGTTT+GGG 0.373515 2_2:-70088257 Msa0268150:CDS
GTCATCAGTGATAATGTTCC+AGG 0.377002 2_2:+70088419 None:intergenic
GCGTTGATCTTTCTCGGAAC+AGG 0.380171 2_2:-70090788 Msa0268150:CDS
TTTACAGTCATTTCGAAAAG+TGG 0.389227 2_2:-70087979 Msa0268150:intron
GAATCGGCGTTGATCTTTCT+CGG 0.402893 2_2:-70090794 Msa0268150:CDS
CCAATCAATAGGGTTTGCTT+TGG 0.405132 2_2:+70086717 None:intergenic
CGACAATGACTGAGCGCAAA+CGG 0.414803 2_2:+70090706 None:intergenic
TGATTGTTATAAATAATAAA+TGG 0.427899 2_2:-70085181 Msa0268150:three_prime_UTR
CTTATATATCTGATGTTTCA+CGG 0.432628 2_2:-70088205 Msa0268150:CDS
CCAAAGCAAACCCTATTGAT+TGG 0.435743 2_2:-70086717 Msa0268150:CDS
GAAAATGAGAAGAAAGAAGA+AGG 0.447368 2_2:+70090907 None:intergenic
ATGAGTCATTCCAATCAATA+GGG 0.448438 2_2:+70086707 None:intergenic
TTCGATGGTTTGTTCATCAT+CGG 0.450026 2_2:-70090470 Msa0268150:CDS
ATTCCCGCGAGTACAGAATA+TGG 0.455050 2_2:-70088182 Msa0268150:intron
CTAGGTTTGCTTTAGAAACT+GGG 0.456159 2_2:+70085501 None:intergenic
GTGGGATCAATATCATTTGT+TGG 0.461356 2_2:+70089456 None:intergenic
GAAGGGTTGCTCAGATGGCC+TGG 0.469919 2_2:-70088437 Msa0268150:CDS
AATTATATATTGATTGATGT+TGG 0.471348 2_2:-70090516 Msa0268150:CDS
CTACCTGAGTCAGCATTCAA+TGG 0.481362 2_2:-70089427 Msa0268150:CDS
GTCGTCGGTGCCGTTGGATG+TGG 0.481521 2_2:+70090832 None:intergenic
GAACATGCTGATGCAGTCCT+TGG 0.486458 2_2:-70089513 Msa0268150:CDS
GAATGCTGACTCAGGTAGAT+GGG 0.487485 2_2:+70089432 None:intergenic
AGTTCCGTCGTCGGTGCCGT+TGG 0.490322 2_2:+70090826 None:intergenic
TTGATGAGACACAGTACATT+GGG 0.499967 2_2:+70090749 None:intergenic
ATAGTGCAATTAACTGGTAA+AGG 0.503581 2_2:+70088357 None:intergenic
ATCTCTAATTAGGATATTGG+TGG 0.503723 2_2:+70085261 None:intergenic
AATACGAAGGGTTGCTCAGA+TGG 0.505761 2_2:-70088442 Msa0268150:CDS
TCTCATCTCTTCTGGATCTA+CGG 0.507309 2_2:-70090866 Msa0268150:five_prime_UTR
GACGCCATGGCCACATCCAA+CGG 0.511458 2_2:-70090842 Msa0268150:exon
ATGAGAAGAAAGAAGAAGGA+AGG 0.515376 2_2:+70090911 None:intergenic
TGCTGATGCAGTCCTTGGAT+TGG 0.516613 2_2:-70089508 Msa0268150:CDS
AGAAGAAAGAAGAAGGAAGG+TGG 0.521916 2_2:+70090914 None:intergenic
GTCATTTCGAAAAGTGGAGC+TGG 0.524520 2_2:-70087973 Msa0268150:CDS
AAACCTGTGGAAAACAAAGA+TGG 0.525306 2_2:+70086840 None:intergenic
CGGAACTCCTCCCTCTGAAT+CGG 0.526733 2_2:-70090810 Msa0268150:CDS
AAAGATCAACGCCGATTCAG+AGG 0.529103 2_2:+70090799 None:intergenic
TTAATTGATTATTGTGGAAG+CGG 0.535963 2_2:-70090549 Msa0268150:CDS
TCTAATTAGGATATTGGTGG+GGG 0.540434 2_2:+70085264 None:intergenic
GACTGAGCGCAAACGGAACA+AGG 0.540973 2_2:+70090713 None:intergenic
GGTGCCGTTGGATGTGGCCA+TGG 0.542231 2_2:+70090838 None:intergenic
CTGGATCTACGGCGACGCCA+TGG 0.542253 2_2:-70090855 Msa0268150:exon
TCTCTAATTAGGATATTGGT+GGG 0.545609 2_2:+70085262 None:intergenic
TTAGGGAGACTGTGCTTCGA+TGG 0.547897 2_2:-70090485 Msa0268150:CDS
ACATCCAACGGCACCGACGA+CGG 0.551645 2_2:-70090830 Msa0268150:CDS
GAAAAGTGGAGCTGGACAGT+TGG 0.552369 2_2:-70087965 Msa0268150:CDS
CTCTAATTAGGATATTGGTG+GGG 0.557419 2_2:+70085263 None:intergenic
AAAAGATTCTTAGGATACAC+TGG 0.570189 2_2:+70085304 None:intergenic
AGCAGAAGCAACATAGAATG+AGG 0.572322 2_2:+70085126 None:intergenic
ATTGATGAGACACAGTACAT+TGG 0.574414 2_2:+70090748 None:intergenic
GTTCAGAAACAACGCAAGGA+AGG 0.576002 2_2:-70088471 Msa0268150:CDS
TGAGTCAGCATTCAATGGAT+AGG 0.583236 2_2:-70089422 Msa0268150:intron
CCGCCTTCCAGCAAAACTGT+TGG 0.583823 2_2:+70085475 None:intergenic
TATCCATTGAATGCTGACTC+AGG 0.588545 2_2:+70089424 None:intergenic
AAGATCAACGCCGATTCAGA+GGG 0.594996 2_2:+70090800 None:intergenic
TTGTGGATGTAGGTAATGCA+TGG 0.597231 2_2:-70088278 Msa0268150:intron
TCGATGTTAATTGATTATTG+TGG 0.600435 2_2:-70090555 Msa0268150:CDS
AGACTCTTGAAATTGTGAAG+AGG 0.603087 2_2:-70086746 Msa0268150:CDS
ATTGATTATTGTGGAAGCGG+TGG 0.603095 2_2:-70090546 Msa0268150:CDS
TCAGTCATTGTCGATCCCAC+CGG 0.604108 2_2:-70090696 Msa0268150:CDS
ATCAACGCCGATTCAGAGGG+AGG 0.605019 2_2:+70090803 None:intergenic
AGAGGGAGGAGTTCCGTCGT+CGG 0.610126 2_2:+70090817 None:intergenic
ATACCATATTCTGTACTCGC+GGG 0.613014 2_2:+70088179 None:intergenic
ACGGAACAAGGAGGATCAGA+GGG 0.613154 2_2:+70090725 None:intergenic
AACGGAACAAGGAGGATCAG+AGG 0.614159 2_2:+70090724 None:intergenic
CTCGTACATCATCCAATCCA+AGG 0.621489 2_2:+70089496 None:intergenic
CCAGTTTCTAAAGCAAACCT+AGG 0.630294 2_2:-70085500 Msa0268150:three_prime_UTR
AGGAAGGACAAGAAATACGA+AGG 0.640963 2_2:-70088455 Msa0268150:CDS
CATACCATATTCTGTACTCG+CGG 0.641738 2_2:+70088178 None:intergenic
ACTTGTGATATTATAGTGTG+AGG 0.645922 2_2:-70085429 Msa0268150:three_prime_UTR
TTTGGTTCAGAAACAACGCA+AGG 0.660626 2_2:-70088475 Msa0268150:CDS
GGAAGGACAAGAAATACGAA+GGG 0.662583 2_2:-70088454 Msa0268150:CDS
AATGCTGACTCAGGTAGATG+GGG 0.684919 2_2:+70089433 None:intergenic
CTAATTAGGATATTGGTGGG+GGG 0.709677 2_2:+70085265 None:intergenic
GATGTAGGTAATGCATGGAG+AGG 0.710977 2_2:-70088273 Msa0268150:intron
TCATGAGTTTGATCACCACA+AGG 0.734521 2_2:-70086688 Msa0268150:CDS
ATGCTGACTCAGGTAGATGG+GGG 0.739738 2_2:+70089434 None:intergenic
TGAGCGCAAACGGAACAAGG+AGG 0.758779 2_2:+70090716 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTTAGATATTCATTATAT+AGG - chr2_2:70088230-70088249 Msa0268150:CDS 10.0%
!! ATTTAGATATTCATTATATA+GGG - chr2_2:70088231-70088250 Msa0268150:CDS 10.0%
!! ATTTAAACTAATTAACTAAT+CGG - chr2_2:70089171-70089190 Msa0268150:intron 10.0%
!! TGATTGTTATAAATAATAAA+TGG - chr2_2:70090918-70090937 Msa0268150:five_prime_UTR 10.0%
!!! AATTATATATTGATTGATGT+TGG - chr2_2:70085583-70085602 Msa0268150:intron 15.0%
!! AAAATAGATAAATGACTATT+AGG - chr2_2:70085814-70085833 Msa0268150:intron 15.0%
!! ATAACTAATATTAACGATAA+TGG + chr2_2:70086863-70086882 None:intergenic 15.0%
!! TATTGTTAAAGATACATATT+GGG + chr2_2:70087000-70087019 None:intergenic 15.0%
!! TTATTGTTAAAGATACATAT+TGG + chr2_2:70087001-70087020 None:intergenic 15.0%
!! TTTCAATTATTTATTGTTAC+TGG + chr2_2:70087363-70087382 None:intergenic 15.0%
!! TAATATTGGATTCATTATAT+AGG - chr2_2:70088163-70088182 Msa0268150:intron 15.0%
!! AATATTGGATTCATTATATA+GGG - chr2_2:70088164-70088183 Msa0268150:intron 15.0%
!!! TATATTTTTCCTATTTTCAA+AGG + chr2_2:70088469-70088488 None:intergenic 15.0%
!!! TAGATGCTTTAAAAAATTTA+GGG - chr2_2:70088672-70088691 Msa0268150:intron 15.0%
!! TTTAAAAAATTTAGGGATAT+CGG - chr2_2:70088679-70088698 Msa0268150:intron 15.0%
!! TAATACTCCAATAATTAATT+GGG + chr2_2:70088849-70088868 None:intergenic 15.0%
!! TTAATACTCCAATAATTAAT+TGG + chr2_2:70088850-70088869 None:intergenic 15.0%
!!! GATTAGTTAATTAGTTTAAA+TGG + chr2_2:70089172-70089191 None:intergenic 15.0%
!! TTTAAACTAATTAACTAATC+GGG - chr2_2:70089172-70089191 Msa0268150:intron 15.0%
!!! ATATTTGACTTATTTACAAA+TGG + chr2_2:70089472-70089491 None:intergenic 15.0%
!! TCTTGATACTATAATATTAT+TGG - chr2_2:70089852-70089871 Msa0268150:intron 15.0%
!!! TAATTTTTCACTTTTTTGTT+TGG - chr2_2:70090111-70090130 Msa0268150:intron 15.0%
!! AAAAGATGAAGGATTATTAA+CGG - chr2_2:70085894-70085913 Msa0268150:intron 20.0%
!! TAGCATCAAAATATTTCTTA+AGG - chr2_2:70086044-70086063 Msa0268150:intron 20.0%
!! TCAATTTCTTTGTTAATTAG+TGG + chr2_2:70086156-70086175 None:intergenic 20.0%
!!! AGAATAAAAAACTAGTTCTT+TGG - chr2_2:70086537-70086556 Msa0268150:intron 20.0%
!!! ATCTTAAGATTTGTTTATGT+AGG + chr2_2:70086785-70086804 None:intergenic 20.0%
!!! CAATTAATGAACTTTTCATT+TGG + chr2_2:70087276-70087295 None:intergenic 20.0%
!!! AGTAAAGCATTCTTAATATA+AGG + chr2_2:70087774-70087793 None:intergenic 20.0%
!! ATCTATTTGTTTCATCATTT+AGG - chr2_2:70088030-70088049 Msa0268150:intron 20.0%
!! TCTATTTGTTTCATCATTTA+GGG - chr2_2:70088031-70088050 Msa0268150:intron 20.0%
!!! TTCTGTTGTCAATTTTTTTT+GGG - chr2_2:70088194-70088213 Msa0268150:CDS 20.0%
!!! CTAAATTTTTTAAAGCATCT+AGG + chr2_2:70088673-70088692 None:intergenic 20.0%
!!! CTAGATGCTTTAAAAAATTT+AGG - chr2_2:70088671-70088690 Msa0268150:intron 20.0%
!! AATAGAACCCAATTAATTAT+TGG - chr2_2:70088839-70088858 Msa0268150:intron 20.0%
!! TTCCATTGATATTTATATAC+AGG + chr2_2:70088977-70088996 None:intergenic 20.0%
!!! TAAAAATAGAAGCTTGTTTT+TGG + chr2_2:70089099-70089118 None:intergenic 20.0%
!! GATAGGATATATAAACTATA+GGG + chr2_2:70089129-70089148 None:intergenic 20.0%
!! TGATAGGATATATAAACTAT+AGG + chr2_2:70089130-70089149 None:intergenic 20.0%
!!! AGTTAATTAGTTTAAATGGT+TGG + chr2_2:70089168-70089187 None:intergenic 20.0%
!! GGTGGTAAAATATTATTAAT+TGG - chr2_2:70089321-70089340 Msa0268150:intron 20.0%
!! GATGAAAAAAATGATGATTT+GGG + chr2_2:70089723-70089742 None:intergenic 20.0%
!! TGATGAAAAAAATGATGATT+TGG + chr2_2:70089724-70089743 None:intergenic 20.0%
!!! ATCATTTTTTTCATCATGAA+CGG - chr2_2:70089728-70089747 Msa0268150:intron 20.0%
!!! ATTGAAGTTGATAAAATTTG+CGG - chr2_2:70090196-70090215 Msa0268150:intron 20.0%
!! TAAATAAGATCAACTGTATA+TGG + chr2_2:70090546-70090565 None:intergenic 20.0%
!!! TTGATCTTATTTAGATTCAT+TGG - chr2_2:70090553-70090572 Msa0268150:CDS 20.0%
!! AAAAGATTACATCTCTAATT+AGG + chr2_2:70090851-70090870 None:intergenic 20.0%
! TCGATGTTAATTGATTATTG+TGG - chr2_2:70085544-70085563 Msa0268150:three_prime_UTR 25.0%
! TTAATTGATTATTGTGGAAG+CGG - chr2_2:70085550-70085569 Msa0268150:exon 25.0%
! AAAGATGAAGGATTATTAAC+GGG - chr2_2:70085895-70085914 Msa0268150:intron 25.0%
! ATTTCTTTGTTAATTAGTGG+TGG + chr2_2:70086153-70086172 None:intergenic 25.0%
!! ATGGCAACTAGAAATTTTAA+GGG + chr2_2:70086230-70086249 None:intergenic 25.0%
!! AATGGCAACTAGAAATTTTA+AGG + chr2_2:70086231-70086250 None:intergenic 25.0%
!!! TTAAAATTTCTAGTTGCCAT+TGG - chr2_2:70086230-70086249 Msa0268150:intron 25.0%
!! CATTTTGTAATCTGATTCTA+TGG - chr2_2:70086255-70086274 Msa0268150:intron 25.0%
!! ATATCATTTGTTGGACTAAA+AGG + chr2_2:70086637-70086656 None:intergenic 25.0%
! TTACATATCAAAACACACAA+CGG + chr2_2:70086715-70086734 None:intergenic 25.0%
! CTTACTTAAACTAAAAGTTC+TGG - chr2_2:70086887-70086906 Msa0268150:intron 25.0%
!!! CTTTTAAGAGCATTTATCTA+GGG + chr2_2:70086928-70086947 None:intergenic 25.0%
!!! TCTTTTAAGAGCATTTATCT+AGG + chr2_2:70086929-70086948 None:intergenic 25.0%
! AAAAGATATAGATAAGCACA+TGG - chr2_2:70086943-70086962 Msa0268150:intron 25.0%
!! ATTTTTGTTGAAGTTCTTTG+TGG - chr2_2:70086966-70086985 Msa0268150:intron 25.0%
!!! GGTATTGAATTTTTCTAGTA+TGG + chr2_2:70087311-70087330 None:intergenic 25.0%
!!! TTTGATTTTTGGACAAGTTT+TGG + chr2_2:70087407-70087426 None:intergenic 25.0%
!!! GTTCTGCTAAATTTGATTTT+TGG + chr2_2:70087418-70087437 None:intergenic 25.0%
! AAATTTAGCAGAACAATACT+GGG - chr2_2:70087424-70087443 Msa0268150:intron 25.0%
! AAAAAGATAGTGCAATTAAC+TGG + chr2_2:70087751-70087770 None:intergenic 25.0%
! CTTATATATCTGATGTTTCA+CGG - chr2_2:70087894-70087913 Msa0268150:intron 25.0%
! CTATTTGTTTCATCATTTAG+GGG - chr2_2:70088032-70088051 Msa0268150:intron 25.0%
! TATTTGTTTCATCATTTAGG+GGG - chr2_2:70088033-70088052 Msa0268150:intron 25.0%
!! TTTTCGAAATGACTGTAAAA+AGG + chr2_2:70088119-70088138 None:intergenic 25.0%
!!! GTTCTGTTGTCAATTTTTTT+TGG - chr2_2:70088193-70088212 Msa0268150:CDS 25.0%
!!! CTATGTGTTATTTTGTTTAG+TGG - chr2_2:70088406-70088425 Msa0268150:CDS 25.0%
! TGTATGAGAAAAACGAAATA+TGG + chr2_2:70088564-70088583 None:intergenic 25.0%
!! AAGTAACTTGACTTTTCTAT+CGG + chr2_2:70088736-70088755 None:intergenic 25.0%
! CATTTATCAATGAGAAAGTA+AGG + chr2_2:70088814-70088833 None:intergenic 25.0%
!! GTAATGGAATATAGTGAATT+TGG - chr2_2:70088886-70088905 Msa0268150:intron 25.0%
! TTGATAGAAAATATCTGCTA+TGG - chr2_2:70088950-70088969 Msa0268150:intron 25.0%
! GTCCTGTATATAAATATCAA+TGG - chr2_2:70088972-70088991 Msa0268150:intron 25.0%
!!! GTTATTTCTTCATAGATGAT+AGG + chr2_2:70089146-70089165 None:intergenic 25.0%
! AAAAATACATAACATACCAG+AGG + chr2_2:70089581-70089600 None:intergenic 25.0%
! TCACCTTACTATAAGTTTAT+GGG + chr2_2:70089685-70089704 None:intergenic 25.0%
!! ATGCACATTTTACAAAATCA+GGG + chr2_2:70089894-70089913 None:intergenic 25.0%
!! AATGCACATTTTACAAAATC+AGG + chr2_2:70089895-70089914 None:intergenic 25.0%
!!! ATTGTGTTGATTGACATTTA+TGG - chr2_2:70089920-70089939 Msa0268150:intron 25.0%
!!! TTGAAGTTGATAAAATTTGC+GGG - chr2_2:70090197-70090216 Msa0268150:intron 25.0%
! ATTACGTAATAGTAATGGTT+AGG + chr2_2:70090277-70090296 None:intergenic 25.0%
! CAAAGATTACGTAATAGTAA+TGG + chr2_2:70090282-70090301 None:intergenic 25.0%
! TATGGCTAAAGTACAAATAA+GGG + chr2_2:70090324-70090343 None:intergenic 25.0%
! ATTTATGCTCATGATGATTA+TGG + chr2_2:70090365-70090384 None:intergenic 25.0%
!! TGAGGAAATCTTGATTTTTA+TGG - chr2_2:70090688-70090707 Msa0268150:CDS 25.0%
! TACATCTCTAATTAGGATAT+TGG + chr2_2:70090844-70090863 None:intergenic 25.0%
GAAAATGAGAAGAAAGAAGA+AGG + chr2_2:70085195-70085214 None:intergenic 30.0%
!! AAAGAGAGTACCTGTAATTA+GGG + chr2_2:70085436-70085455 None:intergenic 30.0%
TTGAAGCTTGATTTAGTGAT+TGG - chr2_2:70085734-70085753 Msa0268150:intron 30.0%
! TTTTATGAAAAGTTGCTCGT+GGG + chr2_2:70085797-70085816 None:intergenic 30.0%
! TTTTTATGAAAAGTTGCTCG+TGG + chr2_2:70085798-70085817 None:intergenic 30.0%
ATTTCATTTCAGATGTATGC+TGG - chr2_2:70085972-70085991 Msa0268150:intron 30.0%
!!! ATATTTTGATGCTATAGCCA+TGG + chr2_2:70086038-70086057 None:intergenic 30.0%
! TAATGTTGTCATTTCTGTGT+TGG - chr2_2:70086077-70086096 Msa0268150:intron 30.0%
!! TTCTGTGTTGGTTATAAAAC+TGG - chr2_2:70086089-70086108 Msa0268150:intron 30.0%
! TGTTGGTTATAAAACTGGTA+AGG - chr2_2:70086094-70086113 Msa0268150:intron 30.0%
! TGGCAACTAGAAATTTTAAG+GGG + chr2_2:70086229-70086248 None:intergenic 30.0%
CAGATTACAAAATGAACCAA+TGG + chr2_2:70086249-70086268 None:intergenic 30.0%
TGACATGATATTCAAGAACA+TGG - chr2_2:70086421-70086440 Msa0268150:intron 30.0%
AGACAAAAGGAAGAAAATCT+AGG + chr2_2:70086469-70086488 None:intergenic 30.0%
! GATTTTCTTCCTTTTGTCTA+CGG - chr2_2:70086470-70086489 Msa0268150:intron 30.0%
TCAGGTCAATTCAAATTTCA+AGG + chr2_2:70086502-70086521 None:intergenic 30.0%
TCTCAAAGACTGAAAATTTC+AGG + chr2_2:70086520-70086539 None:intergenic 30.0%
ATGTAGGTTTCGAAAATAGA+GGG + chr2_2:70086769-70086788 None:intergenic 30.0%
TATGTAGGTTTCGAAAATAG+AGG + chr2_2:70086770-70086789 None:intergenic 30.0%
! TCTGAGACTATTTGATAGTT+AGG + chr2_2:70086827-70086846 None:intergenic 30.0%
TCACTTACCAATCTGTTAAA+AGG - chr2_2:70087037-70087056 Msa0268150:intron 30.0%
!! TAAGGTACCTTTTAACAGAT+TGG + chr2_2:70087047-70087066 None:intergenic 30.0%
TAGAGCAACATTGATCAATA+AGG + chr2_2:70087065-70087084 None:intergenic 30.0%
TATAATTCTGTTGATATCCC+AGG - chr2_2:70087111-70087130 Msa0268150:intron 30.0%
AACTCAGATGCTTGTATATT+TGG - chr2_2:70087209-70087228 Msa0268150:intron 30.0%
GTGCTTACTGCTTTATATTT+GGG + chr2_2:70087338-70087357 None:intergenic 30.0%
TGTGCTTACTGCTTTATATT+TGG + chr2_2:70087339-70087358 None:intergenic 30.0%
!!! TTTTTGGACAAGTTTTGGTT+TGG + chr2_2:70087402-70087421 None:intergenic 30.0%
CAAATTTAGCAGAACAATAC+TGG - chr2_2:70087423-70087442 Msa0268150:intron 30.0%
ACACATGCTCAAAATATAAC+TGG + chr2_2:70087453-70087472 None:intergenic 30.0%
ATCATAATTCATGCTGAGAT+AGG + chr2_2:70087508-70087527 None:intergenic 30.0%
! CACCTTTTCTTTGATTGTAT+GGG - chr2_2:70087529-70087548 Msa0268150:intron 30.0%
!!! TGTTGCAAAGTTTTAAACCA+TGG + chr2_2:70087582-70087601 None:intergenic 30.0%
AGAAGAGAAGTTTCCTTATT+TGG - chr2_2:70087606-70087625 Msa0268150:intron 30.0%
TTCAATCCTGATGCAAAAAA+TGG + chr2_2:70087715-70087734 None:intergenic 30.0%
ATAGTGCAATTAACTGGTAA+AGG + chr2_2:70087745-70087764 None:intergenic 30.0%
!!! TTACTGTTTTTTGTGGATGT+AGG - chr2_2:70087811-70087830 Msa0268150:intron 30.0%
!! ATCTGTTTGGGATTTCTTTT+TGG - chr2_2:70087854-70087873 Msa0268150:intron 30.0%
!! TTCTTTTTGGTGAGAAAAGT+AGG - chr2_2:70087867-70087886 Msa0268150:intron 30.0%
!! TCTTTTTGGTGAGAAAAGTA+GGG - chr2_2:70087868-70087887 Msa0268150:intron 30.0%
TTTACAGTCATTTCGAAAAG+TGG - chr2_2:70088120-70088139 Msa0268150:intron 30.0%
ACAGTTGGATCTTCTAATAT+TGG - chr2_2:70088149-70088168 Msa0268150:intron 30.0%
! TAGCACAAACCTTTGAAAAT+AGG - chr2_2:70088457-70088476 Msa0268150:CDS 30.0%
!! TTTCGTTTTTCTCATACAAG+AGG - chr2_2:70088566-70088585 Msa0268150:intron 30.0%
TACTTGTTCAATAACATGAC+TGG - chr2_2:70088605-70088624 Msa0268150:intron 30.0%
! AGTAACTTGACTTTTCTATC+GGG + chr2_2:70088735-70088754 None:intergenic 30.0%
CCATTACGCATTTATGATAA+TGG + chr2_2:70088873-70088892 None:intergenic 30.0%
CCATTATCATAAATGCGTAA+TGG - chr2_2:70088870-70088889 Msa0268150:intron 30.0%
ATTTGGTCATAAGTGTGTAA+TGG - chr2_2:70088903-70088922 Msa0268150:intron 30.0%
! GTGTGTAATGGAATATAGAA+AGG - chr2_2:70088915-70088934 Msa0268150:intron 30.0%
GGAATACAAGATCATAAATG+AGG - chr2_2:70088993-70089012 Msa0268150:intron 30.0%
!!! AGAAGCTTGTTTTTGGTTTA+GGG + chr2_2:70089092-70089111 None:intergenic 30.0%
!!! TAGAAGCTTGTTTTTGGTTT+AGG + chr2_2:70089093-70089112 None:intergenic 30.0%
CAAAATTGAAAACAAACCTG+TGG + chr2_2:70089275-70089294 None:intergenic 30.0%
ATGAGTCATTCCAATCAATA+GGG + chr2_2:70089395-70089414 None:intergenic 30.0%
!! ACAATGAGTTTTTGAAAGAG+TGG - chr2_2:70089434-70089453 Msa0268150:CDS 30.0%
ATTTACAAATGGATACCTTC+TGG + chr2_2:70089461-70089480 None:intergenic 30.0%
TATTTATCATTGTACTCCTC+TGG - chr2_2:70089562-70089581 Msa0268150:intron 30.0%
CACCTTACTATAAGTTTATG+GGG + chr2_2:70089684-70089703 None:intergenic 30.0%
CTCACCTTACTATAAGTTTA+TGG + chr2_2:70089686-70089705 None:intergenic 30.0%
CATAAACTTATAGTAAGGTG+AGG - chr2_2:70089684-70089703 Msa0268150:intron 30.0%
! AAAAAATGATGATTTGGGTC+AGG + chr2_2:70089718-70089737 None:intergenic 30.0%
GTACATAGAGAAGTAGAATA+TGG - chr2_2:70089750-70089769 Msa0268150:intron 30.0%
TATCAAGAAAAAACGAGACA+TGG + chr2_2:70089810-70089829 None:intergenic 30.0%
AGAAAAAACATAAGACCAGA+GGG + chr2_2:70089835-70089854 None:intergenic 30.0%
AAGAAAAAACATAAGACCAG+AGG + chr2_2:70089836-70089855 None:intergenic 30.0%
TTGTGTAGTGATTGACATTT+AGG - chr2_2:70090014-70090033 Msa0268150:intron 30.0%
TGTGTAGTGATTGACATTTA+GGG - chr2_2:70090015-70090034 Msa0268150:intron 30.0%
!! TGAAGTTGATAAAATTTGCG+GGG - chr2_2:70090198-70090217 Msa0268150:intron 30.0%
TTAGGAACCACAAAAATACT+GGG + chr2_2:70090259-70090278 None:intergenic 30.0%
!!! AAATAAGGGTATGCTGTTTT+AGG + chr2_2:70090310-70090329 None:intergenic 30.0%
GTATGGCTAAAGTACAAATA+AGG + chr2_2:70090325-70090344 None:intergenic 30.0%
! TGTATTATTTTCCTCTTGCA+GGG - chr2_2:70090499-70090518 Msa0268150:CDS 30.0%
! GGGCATCTTTGAAAATATTA+AGG + chr2_2:70090581-70090600 None:intergenic 30.0%
ACTTGTGATATTATAGTGTG+AGG - chr2_2:70090670-70090689 Msa0268150:intron 30.0%
AAAAGATTCTTAGGATACAC+TGG + chr2_2:70090798-70090817 None:intergenic 30.0%
! TATCCTAAGAATCTTTTGCA+GGG - chr2_2:70090801-70090820 Msa0268150:CDS 30.0%
TCTCTAATTAGGATATTGGT+GGG + chr2_2:70090840-70090859 None:intergenic 30.0%
ATCTCTAATTAGGATATTGG+TGG + chr2_2:70090841-70090860 None:intergenic 30.0%
ATGAGAAGAAAGAAGAAGGA+AGG + chr2_2:70085191-70085210 None:intergenic 35.0%
TTGATGAGACACAGTACATT+GGG + chr2_2:70085353-70085372 None:intergenic 35.0%
ATTGATGAGACACAGTACAT+TGG + chr2_2:70085354-70085373 None:intergenic 35.0%
! CTGTAATTAGGGTTTTTCTC+CGG + chr2_2:70085425-70085444 None:intergenic 35.0%
!! GAAAGAGAGTACCTGTAATT+AGG + chr2_2:70085437-70085456 None:intergenic 35.0%
! TTGATGTGATGTTCGTTTTG+TGG - chr2_2:70085503-70085522 Msa0268150:three_prime_UTR 35.0%
! TGTTCGTTTTGTGGATTTGT+AGG - chr2_2:70085512-70085531 Msa0268150:three_prime_UTR 35.0%
!! TTCGATGGTTTGTTCATCAT+CGG - chr2_2:70085629-70085648 Msa0268150:intron 35.0%
! TAACTCACAGAATCGATTCT+TGG + chr2_2:70085658-70085677 None:intergenic 35.0%
TCCAACAAGTCAAAAGATGA+AGG - chr2_2:70085883-70085902 Msa0268150:intron 35.0%
!!! TCCTTCATCTTTTGACTTGT+TGG + chr2_2:70085887-70085906 None:intergenic 35.0%
CAGGATGAAATCATAAGAGT+TGG - chr2_2:70085918-70085937 Msa0268150:intron 35.0%
!! GCAGAGCATCTGATTTTTAA+GGG - chr2_2:70085947-70085966 Msa0268150:intron 35.0%
TTTCAGATGTATGCTGGTAA+AGG - chr2_2:70085978-70085997 Msa0268150:intron 35.0%
TATGCTGGTAAAGGTTTCTA+GGG - chr2_2:70085987-70086006 Msa0268150:intron 35.0%
ATGCCATGAAGAGAAAGAAA+AGG - chr2_2:70086011-70086030 Msa0268150:intron 35.0%
TGCCATGAAGAGAAAGAAAA+GGG - chr2_2:70086012-70086031 Msa0268150:intron 35.0%
!! TTTGTTAATTAGTGGTGGAC+TGG + chr2_2:70086148-70086167 None:intergenic 35.0%
CCTAAAATGAATTTCTTCCC+AGG + chr2_2:70086352-70086371 None:intergenic 35.0%
! CCTGGGAAGAAATTCATTTT+AGG - chr2_2:70086349-70086368 Msa0268150:intron 35.0%
GTGGGATCAATATCATTTGT+TGG + chr2_2:70086646-70086665 None:intergenic 35.0%
GATACTGCACATAATATCCT+GGG + chr2_2:70087131-70087150 None:intergenic 35.0%
! ACTGCTTTATATTTGGGACT+TGG + chr2_2:70087332-70087351 None:intergenic 35.0%
!!! GGTTTGGCTTTTGTTTTTAC+TGG + chr2_2:70087386-70087405 None:intergenic 35.0%
! CATTGCAATCTATGGGTTAA+GGG + chr2_2:70087480-70087499 None:intergenic 35.0%
! ACATTGCAATCTATGGGTTA+AGG + chr2_2:70087481-70087500 None:intergenic 35.0%
! GCACCTTTTCTTTGATTGTA+TGG - chr2_2:70087528-70087547 Msa0268150:intron 35.0%
AGCCCATACAATCAAAGAAA+AGG + chr2_2:70087534-70087553 None:intergenic 35.0%
! ATTCAACTACTTGAGAGCAT+AGG + chr2_2:70087559-70087578 None:intergenic 35.0%
!! CGTTGTTTCTGAACCAAATA+AGG + chr2_2:70087622-70087641 None:intergenic 35.0%
!!! AATCAGCCATTTTTTGCATC+AGG - chr2_2:70087706-70087725 Msa0268150:intron 35.0%
! TGCTTTACTCCTTTTATACG+AGG - chr2_2:70087785-70087804 Msa0268150:intron 35.0%
CAGTAAAGTCCTCGTATAAA+AGG + chr2_2:70087797-70087816 None:intergenic 35.0%
!!! GAGGACTTTACTGTTTTTTG+TGG - chr2_2:70087804-70087823 Msa0268150:intron 35.0%
! ATTTGAAATACCTTCGTGCT+TGG - chr2_2:70087944-70087963 Msa0268150:CDS 35.0%
!! TTCTCAGCATGCTTTATTTC+TGG - chr2_2:70088259-70088278 Msa0268150:CDS 35.0%
CTTAATGTCACTCTCTCTTA+AGG - chr2_2:70088306-70088325 Msa0268150:intron 35.0%
GTTGAATCAAATCTAGCTGT+AGG + chr2_2:70088387-70088406 None:intergenic 35.0%
AAGAGACACTATAGTCTATC+AGG + chr2_2:70088520-70088539 None:intergenic 35.0%
TTCAATAACATGACTGGAGA+AGG - chr2_2:70088611-70088630 Msa0268150:intron 35.0%
CACACTGAGTAATCATCTAA+TGG + chr2_2:70088637-70088656 None:intergenic 35.0%
! TAACTTGACTTTTCTATCGG+GGG + chr2_2:70088733-70088752 None:intergenic 35.0%
! GTAACTTGACTTTTCTATCG+GGG + chr2_2:70088734-70088753 None:intergenic 35.0%
!!! TTTTTTGTGTCACTACAGAC+TGG - chr2_2:70089224-70089243 Msa0268150:intron 35.0%
AAACCTGTGGAAAACAAAGA+TGG + chr2_2:70089262-70089281 None:intergenic 35.0%
TGAATGTTACACTATCTCAC+TGG - chr2_2:70089300-70089319 Msa0268150:intron 35.0%
AGACTCTTGAAATTGTGAAG+AGG - chr2_2:70089353-70089372 Msa0268150:intron 35.0%
CATGAGTCATTCCAATCAAT+AGG + chr2_2:70089396-70089415 None:intergenic 35.0%
TCAAAAACTCATTGTCCTTG+TGG + chr2_2:70089429-70089448 None:intergenic 35.0%
CATGCTACTATCAGATTGTT+GGG + chr2_2:70089527-70089546 None:intergenic 35.0%
TCATGCTACTATCAGATTGT+TGG + chr2_2:70089528-70089547 None:intergenic 35.0%
ACTCTTCTATGAATGTGCTT+AGG - chr2_2:70089617-70089636 Msa0268150:intron 35.0%
CTCTTCTATGAATGTGCTTA+GGG - chr2_2:70089618-70089637 Msa0268150:intron 35.0%
GTCCCCATAAACTTATAGTA+AGG - chr2_2:70089679-70089698 Msa0268150:intron 35.0%
!!! TTTTTTCTTGATACTCCCTC+TGG - chr2_2:70089817-70089836 Msa0268150:intron 35.0%
ATTTATGGTGTGTTTGCATG+TGG - chr2_2:70089935-70089954 Msa0268150:intron 35.0%
TGTGGAGATAAATAGTGAGT+AGG - chr2_2:70089953-70089972 Msa0268150:intron 35.0%
ATAGTGAGTAGGTATGAAGT+TGG - chr2_2:70089964-70089983 Msa0268150:intron 35.0%
TAGTGAGTAGGTATGAAGTT+GGG - chr2_2:70089965-70089984 Msa0268150:intron 35.0%
! ATTTAGGGTGTGTTTGTATG+TGG - chr2_2:70090030-70090049 Msa0268150:intron 35.0%
TGTGGAGATAAATAGTGAGT+AGG - chr2_2:70089953-70089972 Msa0268150:intron 35.0%
ATAGTGAGTAGGTATGAAGT+TGG - chr2_2:70089964-70089983 Msa0268150:intron 35.0%
TAGTGAGTAGGTATGAAGTT+GGG - chr2_2:70089965-70089984 Msa0268150:intron 35.0%
GTTAGGAACCACAAAAATAC+TGG + chr2_2:70090260-70090279 None:intergenic 35.0%
TATGGCCAAGGTACAAATAA+GGG + chr2_2:70090347-70090366 None:intergenic 35.0%
TTATGGCCAAGGTACAAATA+AGG + chr2_2:70090348-70090367 None:intergenic 35.0%
ATCACTACTGATCATGAGAA+GGG + chr2_2:70090439-70090458 None:intergenic 35.0%
! CTGTATTATTTTCCTCTTGC+AGG - chr2_2:70090498-70090517 Msa0268150:CDS 35.0%
!! CTAGGTTTGCTTTAGAAACT+GGG + chr2_2:70090601-70090620 None:intergenic 35.0%
! GTATCCTAAGAATCTTTTGC+AGG - chr2_2:70090800-70090819 Msa0268150:CDS 35.0%
TCTAATTAGGATATTGGTGG+GGG + chr2_2:70090838-70090857 None:intergenic 35.0%
CTCTAATTAGGATATTGGTG+GGG + chr2_2:70090839-70090858 None:intergenic 35.0%
AGAAGAAAGAAGAAGGAAGG+TGG + chr2_2:70085188-70085207 None:intergenic 40.0%
TCTTTCTCTCTCATCTCTTC+TGG - chr2_2:70085225-70085244 Msa0268150:three_prime_UTR 40.0%
TCTCATCTCTTCTGGATCTA+CGG - chr2_2:70085233-70085252 Msa0268150:three_prime_UTR 40.0%
! AATTAGGGTTTTTCTCCGGT+GGG + chr2_2:70085421-70085440 None:intergenic 40.0%
! TAATTAGGGTTTTTCTCCGG+TGG + chr2_2:70085422-70085441 None:intergenic 40.0%
CGGAGAAAAACCCTAATTAC+AGG - chr2_2:70085423-70085442 Msa0268150:three_prime_UTR 40.0%
ATTGATTATTGTGGAAGCGG+TGG - chr2_2:70085553-70085572 Msa0268150:exon 40.0%
TTGATGTTGGCAAGACGTTT+AGG - chr2_2:70085596-70085615 Msa0268150:intron 40.0%
TGATGTTGGCAAGACGTTTA+GGG - chr2_2:70085597-70085616 Msa0268150:intron 40.0%
! ATGAAGGATTATTAACGGGC+AGG - chr2_2:70085899-70085918 Msa0268150:intron 40.0%
!! CGCAGAGCATCTGATTTTTA+AGG - chr2_2:70085946-70085965 Msa0268150:intron 40.0%
GTATGCTGGTAAAGGTTTCT+AGG - chr2_2:70085986-70086005 Msa0268150:intron 40.0%
!! AATTTTAAGGGGTTCTGCTC+TGG + chr2_2:70086218-70086237 None:intergenic 40.0%
AGGAACATACCGTAGACAAA+AGG + chr2_2:70086482-70086501 None:intergenic 40.0%
!! TATCCATTGAATGCTGACTC+AGG + chr2_2:70086678-70086697 None:intergenic 40.0%
TGAGTCAGCATTCAATGGAT+AGG - chr2_2:70086677-70086696 Msa0268150:CDS 40.0%
CGATACTGCACATAATATCC+TGG + chr2_2:70087132-70087151 None:intergenic 40.0%
AGCATCTGAGTTCAGTGATT+GGG + chr2_2:70087201-70087220 None:intergenic 40.0%
AAGCATCTGAGTTCAGTGAT+TGG + chr2_2:70087202-70087221 None:intergenic 40.0%
GGAGTCACATTGCAATCTAT+GGG + chr2_2:70087487-70087506 None:intergenic 40.0%
AGGAGTCACATTGCAATCTA+TGG + chr2_2:70087488-70087507 None:intergenic 40.0%
CTCTCAAGTAGTTGAATCCA+TGG - chr2_2:70087562-70087581 Msa0268150:intron 40.0%
! TTTGGTTCAGAAACAACGCA+AGG - chr2_2:70087624-70087643 Msa0268150:intron 40.0%
AGGAAGGACAAGAAATACGA+AGG - chr2_2:70087644-70087663 Msa0268150:intron 40.0%
GGAAGGACAAGAAATACGAA+GGG - chr2_2:70087645-70087664 Msa0268150:intron 40.0%
! GTCATCAGTGATAATGTTCC+AGG + chr2_2:70087683-70087702 None:intergenic 40.0%
TTGTGGATGTAGGTAATGCA+TGG - chr2_2:70087821-70087840 Msa0268150:intron 40.0%
TGGAGAGGATTACATCTGTT+TGG - chr2_2:70087841-70087860 Msa0268150:intron 40.0%
GGAGAGGATTACATCTGTTT+GGG - chr2_2:70087842-70087861 Msa0268150:intron 40.0%
! TTTTGGTGAGAAAAGTAGGG+TGG - chr2_2:70087871-70087890 Msa0268150:intron 40.0%
ATACCATATTCTGTACTCGC+GGG + chr2_2:70087923-70087942 None:intergenic 40.0%
CATACCATATTCTGTACTCG+CGG + chr2_2:70087924-70087943 None:intergenic 40.0%
ATACATATGTCCAAGCACGA+AGG + chr2_2:70087957-70087976 None:intergenic 40.0%
TCAGTTCCATCTCCCAAAAT+TGG - chr2_2:70087981-70088000 Msa0268150:intron 40.0%
! CACACTCGTAGTCCAATTTT+GGG + chr2_2:70087996-70088015 None:intergenic 40.0%
AATGTCACTCTCTCTTAAGG+AGG - chr2_2:70088309-70088328 Msa0268150:intron 40.0%
ATGTCACTCTCTCTTAAGGA+GGG - chr2_2:70088310-70088329 Msa0268150:intron 40.0%
TAAACTGCTTCTTACTTCCC+TGG - chr2_2:70088356-70088375 Msa0268150:intron 40.0%
! AACTTGACTTTTCTATCGGG+GGG + chr2_2:70088732-70088751 None:intergenic 40.0%
TAAATGAGGAGCAAGAGACA+AGG - chr2_2:70089007-70089026 Msa0268150:intron 40.0%
AAGAGACAAGGATATTGCAG+AGG - chr2_2:70089019-70089038 Msa0268150:intron 40.0%
!!! TGTCCATCTTTGTTTTCCAC+AGG - chr2_2:70089256-70089275 Msa0268150:intron 40.0%
ATGTTACACTATCTCACTGG+TGG - chr2_2:70089303-70089322 Msa0268150:intron 40.0%
! CCAATCAATAGGGTTTGCTT+TGG + chr2_2:70089385-70089404 None:intergenic 40.0%
CCAAAGCAAACCCTATTGAT+TGG - chr2_2:70089382-70089401 Msa0268150:intron 40.0%
TCATGAGTTTGATCACCACA+AGG - chr2_2:70089411-70089430 Msa0268150:intron 40.0%
!! TTTTGAAAGAGTGGTCCAGA+AGG - chr2_2:70089443-70089462 Msa0268150:CDS 40.0%
TCTATGAATGTGCTTAGGGA+AGG - chr2_2:70089622-70089641 Msa0268150:intron 40.0%
! AATGATGATTTGGGTCAGGA+GGG + chr2_2:70089714-70089733 None:intergenic 40.0%
! AAATGATGATTTGGGTCAGG+AGG + chr2_2:70089715-70089734 None:intergenic 40.0%
!! TTGGTTAGTGGAAAAGCACT+TGG - chr2_2:70090150-70090169 Msa0268150:intron 40.0%
!! TGGTTAGTGGAAAAGCACTT+GGG - chr2_2:70090151-70090170 Msa0268150:intron 40.0%
!! AGTTGATAAAATTTGCGGGG+TGG - chr2_2:70090201-70090220 Msa0268150:intron 40.0%
AAGTGACACTACACTTTCAC+TGG - chr2_2:70090233-70090252 Msa0268150:intron 40.0%
!!! TAAGGGTATGCTGTTTTAGG+AGG + chr2_2:70090307-70090326 None:intergenic 40.0%
CCAAGGTACAAATAAGGGTA+TGG + chr2_2:70090342-70090361 None:intergenic 40.0%
! CCATACCCTTATTTGTACCT+TGG - chr2_2:70090339-70090358 Msa0268150:intron 40.0%
TCACTACTGATCATGAGAAG+GGG + chr2_2:70090438-70090457 None:intergenic 40.0%
GATCACTACTGATCATGAGA+AGG + chr2_2:70090440-70090459 None:intergenic 40.0%
!! CCTAGGTTTGCTTTAGAAAC+TGG + chr2_2:70090602-70090621 None:intergenic 40.0%
!! CCAGTTTCTAAAGCAAACCT+AGG - chr2_2:70090599-70090618 Msa0268150:intron 40.0%
TGACCCTGCAAAAGATTCTT+AGG + chr2_2:70090807-70090826 None:intergenic 40.0%
CTAATTAGGATATTGGTGGG+GGG + chr2_2:70090837-70090856 None:intergenic 40.0%
!! AAGATCAACGCCGATTCAGA+GGG + chr2_2:70085302-70085321 None:intergenic 45.0%
!! AAAGATCAACGCCGATTCAG+AGG + chr2_2:70085303-70085322 None:intergenic 45.0%
!! GAATCGGCGTTGATCTTTCT+CGG - chr2_2:70085305-70085324 Msa0268150:three_prime_UTR 45.0%
AAAATCAGATGCTCTGCGAC+AGG + chr2_2:70085944-70085963 None:intergenic 45.0%
! GGCCCTTTTCTTTCTCTTCA+TGG + chr2_2:70086017-70086036 None:intergenic 45.0%
GAAGAGAAAGAAAAGGGCCA+TGG - chr2_2:70086018-70086037 Msa0268150:intron 45.0%
!! GTTAATTAGTGGTGGACTGG+TGG + chr2_2:70086145-70086164 None:intergenic 45.0%
TGAATTTCTTCCCAGGAGCT+GGG + chr2_2:70086345-70086364 None:intergenic 45.0%
ATGAATTTCTTCCCAGGAGC+TGG + chr2_2:70086346-70086365 None:intergenic 45.0%
CTCGTACATCATCCAATCCA+AGG + chr2_2:70086606-70086625 None:intergenic 45.0%
!! AATGCTGACTCAGGTAGATG+GGG + chr2_2:70086669-70086688 None:intergenic 45.0%
!! GAATGCTGACTCAGGTAGAT+GGG + chr2_2:70086670-70086689 None:intergenic 45.0%
!! TGAATGCTGACTCAGGTAGA+TGG + chr2_2:70086671-70086690 None:intergenic 45.0%
CTACCTGAGTCAGCATTCAA+TGG - chr2_2:70086672-70086691 Msa0268150:CDS 45.0%
AAACACACAACGGTCACTAG+AGG + chr2_2:70086705-70086724 None:intergenic 45.0%
! CAGTGATTGGGAAGTACACA+CGG + chr2_2:70087189-70087208 None:intergenic 45.0%
GTTCAGAAACAACGCAAGGA+AGG - chr2_2:70087628-70087647 Msa0268150:intron 45.0%
AATACGAAGGGTTGCTCAGA+TGG - chr2_2:70087657-70087676 Msa0268150:intron 45.0%
GATGTAGGTAATGCATGGAG+AGG - chr2_2:70087826-70087845 Msa0268150:intron 45.0%
ATTCCCGCGAGTACAGAATA+TGG - chr2_2:70087917-70087936 Msa0268150:intron 45.0%
!! CGTAGTCCAATTTTGGGAGA+TGG + chr2_2:70087990-70088009 None:intergenic 45.0%
! GCACACTCGTAGTCCAATTT+TGG + chr2_2:70087997-70088016 None:intergenic 45.0%
GTCATTTCGAAAAGTGGAGC+TGG - chr2_2:70088126-70088145 Msa0268150:intron 45.0%
TGTCACTCTCTCTTAAGGAG+GGG - chr2_2:70088311-70088330 Msa0268150:intron 45.0%
TCTAGCTGTAGGAAACACCA+GGG + chr2_2:70088376-70088395 None:intergenic 45.0%
ATCTAGCTGTAGGAAACACC+AGG + chr2_2:70088377-70088396 None:intergenic 45.0%
! ACTTGACTTTTCTATCGGGG+GGG + chr2_2:70088731-70088750 None:intergenic 45.0%
TGTGCTTAGGGAAGGAATTC+CGG - chr2_2:70089630-70089649 Msa0268150:intron 45.0%
GGATCCCTCATTCTAATCAG+CGG - chr2_2:70089771-70089790 Msa0268150:intron 45.0%
! CATGCCGCTGATTAGAATGA+GGG + chr2_2:70089778-70089797 None:intergenic 45.0%
GGGTGAGTAGAAAACTGAGT+AGG - chr2_2:70090080-70090099 Msa0268150:intron 45.0%
!! TCACTGGCCCAGTATTTTTG+TGG - chr2_2:70090249-70090268 Msa0268150:intron 45.0%
GCTCATGATGATTATGGCCA+AGG + chr2_2:70090359-70090378 None:intergenic 45.0%
!! CAGCAAAACTGTTGGTTCCT+AGG + chr2_2:70090619-70090638 None:intergenic 45.0%
! CTAGGAACCAACAGTTTTGC+TGG - chr2_2:70090617-70090636 Msa0268150:intron 45.0%
! GAACCAACAGTTTTGCTGGA+AGG - chr2_2:70090621-70090640 Msa0268150:intron 45.0%
!! TAAAAATATACATTATTATT+AGG - chr2_2:70085842-70085861 Msa0268150:intron 5.0%
! GCGTTGATCTTTCTCGGAAC+AGG - chr2_2:70085311-70085330 Msa0268150:three_prime_UTR 50.0%
CGGAACAGGCTGTTCAAGTA+TGG - chr2_2:70085325-70085344 Msa0268150:three_prime_UTR 50.0%
ACGGAACAAGGAGGATCAGA+GGG + chr2_2:70085377-70085396 None:intergenic 50.0%
AACGGAACAAGGAGGATCAG+AGG + chr2_2:70085378-70085397 None:intergenic 50.0%
CGACAATGACTGAGCGCAAA+CGG + chr2_2:70085396-70085415 None:intergenic 50.0%
TCAGTCATTGTCGATCCCAC+CGG - chr2_2:70085403-70085422 Msa0268150:three_prime_UTR 50.0%
TTAGGGAGACTGTGCTTCGA+TGG - chr2_2:70085614-70085633 Msa0268150:intron 50.0%
GAACATGCTGATGCAGTCCT+TGG - chr2_2:70086586-70086605 Msa0268150:intron 50.0%
TGCTGATGCAGTCCTTGGAT+TGG - chr2_2:70086591-70086610 Msa0268150:intron 50.0%
!! ATGCTGACTCAGGTAGATGG+GGG + chr2_2:70086668-70086687 None:intergenic 50.0%
GAAAAGTGGAGCTGGACAGT+TGG - chr2_2:70088134-70088153 Msa0268150:intron 50.0%
TGCAGAGGACTCTAACCTTC+TGG - chr2_2:70089034-70089053 Msa0268150:intron 50.0%
!! GGACTCTAACCTTCTGGTTC+CGG - chr2_2:70089040-70089059 Msa0268150:intron 50.0%
CCATCATGAGAAAGCTGCAC+CGG + chr2_2:70089652-70089671 None:intergenic 50.0%
! GCATGCCGCTGATTAGAATG+AGG + chr2_2:70089779-70089798 None:intergenic 50.0%
CTACTGATCATGAGAAGGGG+AGG + chr2_2:70090435-70090454 None:intergenic 50.0%
CACATGCTTTACCCTGCAAG+AGG + chr2_2:70090513-70090532 None:intergenic 50.0%
! CCAACAGTTTTGCTGGAAGG+CGG - chr2_2:70090624-70090643 Msa0268150:intron 50.0%
CGGAACTCCTCCCTCTGAAT+CGG - chr2_2:70085289-70085308 Msa0268150:three_prime_UTR 55.0%
!! ATCAACGCCGATTCAGAGGG+AGG + chr2_2:70085299-70085318 None:intergenic 55.0%
TGAGCGCAAACGGAACAAGG+AGG + chr2_2:70085386-70085405 None:intergenic 55.0%
GACTGAGCGCAAACGGAACA+AGG + chr2_2:70085389-70085408 None:intergenic 55.0%
GGCGCTGTTCTGTTCTGTAC+AGG - chr2_2:70086276-70086295 Msa0268150:intron 55.0%
TCTTACATCCTCCCAGCTCC+TGG - chr2_2:70086331-70086350 Msa0268150:intron 55.0%
CTTACATCCTCCCAGCTCCT+GGG - chr2_2:70086332-70086351 Msa0268150:intron 55.0%
ATTTCTTCCCAGGAGCTGGG+AGG + chr2_2:70086342-70086361 None:intergenic 55.0%
TGACTCAGGTAGATGGGGGT+GGG + chr2_2:70086664-70086683 None:intergenic 55.0%
CTCGAACATCCGGAACCAGA+AGG + chr2_2:70089052-70089071 None:intergenic 55.0%
!! CTTCTGGTTCCGGATGTTCG+AGG - chr2_2:70089050-70089069 Msa0268150:intron 55.0%
CCGGTGCAGCTTTCTCATGA+TGG - chr2_2:70089649-70089668 Msa0268150:intron 55.0%
CCGCCTTCCAGCAAAACTGT+TGG + chr2_2:70090627-70090646 None:intergenic 55.0%
GACGCCATGGCCACATCCAA+CGG - chr2_2:70085257-70085276 Msa0268150:three_prime_UTR 60.0%
!! ACATCCAACGGCACCGACGA+CGG - chr2_2:70085269-70085288 Msa0268150:three_prime_UTR 60.0%
AGAGGGAGGAGTTCCGTCGT+CGG + chr2_2:70085285-70085304 None:intergenic 60.0%
CGTGGGACTCGCGTGTCAAA+AGG + chr2_2:70085780-70085799 None:intergenic 60.0%
CTGACTCAGGTAGATGGGGG+TGG + chr2_2:70086665-70086684 None:intergenic 60.0%
! GGGAAGTACACACGGCACAG+TGG + chr2_2:70087181-70087200 None:intergenic 60.0%
GAAGGGTTGCTCAGATGGCC+TGG - chr2_2:70087662-70087681 Msa0268150:intron 60.0%
TCCGGATGTTCGAGGAACGC+AGG - chr2_2:70089058-70089077 Msa0268150:intron 60.0%
GCCTGCGTTCCTCGAACATC+CGG + chr2_2:70089062-70089081 None:intergenic 60.0%
CTGGATCTACGGCGACGCCA+TGG - chr2_2:70085244-70085263 Msa0268150:three_prime_UTR 65.0%
!! GGTGCCGTTGGATGTGGCCA+TGG + chr2_2:70085264-70085283 None:intergenic 65.0%
!! GTCGTCGGTGCCGTTGGATG+TGG + chr2_2:70085270-70085289 None:intergenic 65.0%
!! AGTTCCGTCGTCGGTGCCGT+TGG + chr2_2:70085276-70085295 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 70085139 70090982 70085139 ID=Msa0268150;Name=Msa0268150
chr2_2 mRNA 70085139 70090982 70085139 ID=Msa0268150-mRNA-1;Parent=Msa0268150;Name=Msa0268150-mRNA-1;_AED=0.25;_eAED=0.25;_QI=124|0.87|1|1|0.87|0.88|9|426|313
chr2_2 exon 70085139 70085601 70085139 ID=Msa0268150-mRNA-1:exon:22482;Parent=Msa0268150-mRNA-1
chr2_2 exon 70086657 70086766 70086657 ID=Msa0268150-mRNA-1:exon:22481;Parent=Msa0268150-mRNA-1
chr2_2 exon 70086844 70086879 70086844 ID=Msa0268150-mRNA-1:exon:22480;Parent=Msa0268150-mRNA-1
chr2_2 exon 70087936 70087994 70087936 ID=Msa0268150-mRNA-1:exon:22479;Parent=Msa0268150-mRNA-1
chr2_2 exon 70088183 70088288 70088183 ID=Msa0268150-mRNA-1:exon:22478;Parent=Msa0268150-mRNA-1
chr2_2 exon 70088371 70088518 70088371 ID=Msa0268150-mRNA-1:exon:22477;Parent=Msa0268150-mRNA-1
chr2_2 exon 70089423 70089550 70089423 ID=Msa0268150-mRNA-1:exon:22476;Parent=Msa0268150-mRNA-1
chr2_2 exon 70090452 70090587 70090452 ID=Msa0268150-mRNA-1:exon:22475;Parent=Msa0268150-mRNA-1
chr2_2 exon 70090677 70090982 70090677 ID=Msa0268150-mRNA-1:exon:22474;Parent=Msa0268150-mRNA-1
chr2_2 five_prime_UTR 70090859 70090982 70090859 ID=Msa0268150-mRNA-1:five_prime_utr;Parent=Msa0268150-mRNA-1
chr2_2 CDS 70090677 70090858 70090677 ID=Msa0268150-mRNA-1:cds;Parent=Msa0268150-mRNA-1
chr2_2 CDS 70090452 70090587 70090452 ID=Msa0268150-mRNA-1:cds;Parent=Msa0268150-mRNA-1
chr2_2 CDS 70089423 70089550 70089423 ID=Msa0268150-mRNA-1:cds;Parent=Msa0268150-mRNA-1
chr2_2 CDS 70088371 70088518 70088371 ID=Msa0268150-mRNA-1:cds;Parent=Msa0268150-mRNA-1
chr2_2 CDS 70088183 70088288 70088183 ID=Msa0268150-mRNA-1:cds;Parent=Msa0268150-mRNA-1
chr2_2 CDS 70087936 70087994 70087936 ID=Msa0268150-mRNA-1:cds;Parent=Msa0268150-mRNA-1
chr2_2 CDS 70086844 70086879 70086844 ID=Msa0268150-mRNA-1:cds;Parent=Msa0268150-mRNA-1
chr2_2 CDS 70086657 70086766 70086657 ID=Msa0268150-mRNA-1:cds;Parent=Msa0268150-mRNA-1
chr2_2 CDS 70085565 70085601 70085565 ID=Msa0268150-mRNA-1:cds;Parent=Msa0268150-mRNA-1
chr2_2 three_prime_UTR 70085139 70085564 70085139 ID=Msa0268150-mRNA-1:three_prime_utr;Parent=Msa0268150-mRNA-1
Gene Sequence

>Msa0268150

ATGGCCACATCCAACGGCACCGACGACGGAACTCCTCCCTCTGAATCGGCGTTGATCTTTCTCGGAACAGGCTGTTCAAGTATGGTTCCCAATGTACTGTGTCTCATCAATCCCTCTGATCCTCCTTGTTCCGTTTGCGCTCAGTCATTGTCGATCCCACCGGAGAAAAACCCTAATTACAGGTGTAATACTTCGATGTTAATTGATTATTGTGGAAGCGGTGGTAATCATAATTATATATTGATTGATGTTGGCAAGACGTTTAGGGAGACTGTGCTTCGATGGTTTGTTCATCATCGGATTCCAAGAATCGATTCTATTATTTTGACTCATGAACATGCTGATGCAGTCCTTGGATTGGATGATGTACGAGCTGTGCAGCCTTTTAGTCCAACAAATGATATTGATCCCACCCCCATCTACCTGAGTCAGCATTCAATGGATAGCATAGAAGAGAAGTTTCCTTATTTGGTTCAGAAACAACGCAAGGAAGGACAAGAAATACGAAGGGTTGCTCAGATGGCCTGGAACATTATCACTGATGACTGCAATCAGCCATTTTTTGCATCAGGATTGAAATTCACTCCTTTACCAGTAATGCATGGAGAGGATTACATCTGTTTGGGATTTCTTTTTGGTGAGAAAAGTAGGGTGGCTTATATATCTGATGTTTCACGGATTCCCGCGAGTACAGAATATGTCATTTCGAAAAGTGGAGCTGGACAGTTGGATCTTCTAATATTGGATTCATTATATAGGACTGGATCGCATAATGTCCATCTTTGTTTTCCACAGACTCTTGAAATTGTGAAGAGGTTGTGTCCAAAGCAAACCCTATTGATTGGAATGACTCATGAGTTTGATCACCACAAGGACAATGAGTTTTTGAAAGAGTGGTCCAGAAGGGTAAAGCATGTGACAATCTATACCATATACAGTTGA

Protein sequence

>Msa0268150

MATSNGTDDGTPPSESALIFLGTGCSSMVPNVLCLINPSDPPCSVCAQSLSIPPEKNPNYRCNTSMLIDYCGSGGNHNYILIDVGKTFRETVLRWFVHHRIPRIDSIILTHEHADAVLGLDDVRAVQPFSPTNDIDPTPIYLSQHSMDSIEEKFPYLVQKQRKEGQEIRRVAQMAWNIITDDCNQPFFASGLKFTPLPVMHGEDYICLGFLFGEKSRVAYISDVSRIPASTEYVISKSGAGQLDLLILDSLYRTGSHNVHLCFPQTLEIVKRLCPKQTLLIGMTHEFDHHKDNEFLKEWSRRVKHVTIYTIYS*