Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0269590 | XP_013464363.1 | 78.550 | 331 | 12 | 2 | 1 | 272 | 1 | 331 | 3.37e-172 | 489 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0269590 | sp|Q9C8M1|PT153_ARATH | 60.479 | 334 | 63 | 6 | 1 | 271 | 1 | 328 | 7.13e-127 | 367 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0194860 | Msa0269590 | 0.802100 | 6.584040e-49 | -8.615850e-47 |
| Msa0194890 | Msa0269590 | 0.803568 | 3.276948e-49 | -8.615850e-47 |
| Msa0213190 | Msa0269590 | 0.984798 | 1.275370e-161 | -8.615850e-47 |
| Msa0230370 | Msa0269590 | 0.820102 | 8.189974e-53 | -8.615850e-47 |
| Msa0269590 | Msa0626270 | 0.816383 | 5.690397e-52 | -8.615850e-47 |
| Msa0269590 | Msa0692880 | 0.800547 | 1.369119e-48 | -8.615850e-47 |
| Msa0269590 | Msa1354200 | 0.801447 | 8.967442e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0269590 | MtrunA17_Chr2g0312911 | 78.550 | 331 | 12 | 2 | 1 | 272 | 1 | 331 | 3.10e-176 | 489 |
| Msa0269590 | MtrunA17_Chr7g0270591 | 41.284 | 327 | 127 | 4 | 6 | 268 | 10 | 335 | 7.43e-77 | 238 |
| Msa0269590 | MtrunA17_Chr4g0069261 | 53.933 | 178 | 81 | 1 | 9 | 186 | 9 | 185 | 1.36e-54 | 181 |
| Msa0269590 | MtrunA17_Chr4g0069261 | 45.333 | 75 | 33 | 1 | 187 | 253 | 244 | 318 | 5.24e-14 | 71.2 |
| Msa0269590 | MtrunA17_Chr3g0137921 | 44.382 | 178 | 98 | 1 | 9 | 186 | 16 | 192 | 3.10e-44 | 153 |
| Msa0269590 | MtrunA17_Chr3g0137921 | 46.237 | 93 | 43 | 3 | 187 | 275 | 252 | 341 | 2.19e-14 | 72.4 |
| Msa0269590 | MtrunA17_Chr2g0307091 | 42.135 | 178 | 102 | 1 | 9 | 186 | 12 | 188 | 1.79e-41 | 145 |
| Msa0269590 | MtrunA17_Chr2g0307091 | 42.553 | 94 | 43 | 3 | 187 | 270 | 248 | 340 | 9.03e-13 | 67.4 |
| Msa0269590 | MtrunA17_Chr4g0063601 | 30.100 | 299 | 165 | 9 | 9 | 270 | 12 | 303 | 2.53e-24 | 99.8 |
| Msa0269590 | MtrunA17_Chr1g0160071 | 25.904 | 166 | 120 | 2 | 15 | 180 | 18 | 180 | 8.17e-12 | 64.7 |
| Msa0269590 | MtrunA17_Chr3g0114581 | 26.452 | 155 | 111 | 2 | 26 | 180 | 30 | 181 | 4.98e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0269590 | AT1G53660.1 | 60.479 | 334 | 63 | 6 | 1 | 271 | 1 | 328 | 7.25e-128 | 367 |
| Msa0269590 | AT1G53660.3 | 60.479 | 334 | 63 | 6 | 1 | 271 | 19 | 346 | 7.41e-128 | 367 |
| Msa0269590 | AT1G53660.4 | 60.201 | 299 | 56 | 5 | 30 | 271 | 2 | 294 | 3.21e-114 | 331 |
| Msa0269590 | AT3G14410.1 | 84.211 | 190 | 26 | 1 | 1 | 186 | 1 | 190 | 1.23e-112 | 328 |
| Msa0269590 | AT3G14410.1 | 74.725 | 91 | 16 | 2 | 187 | 275 | 250 | 335 | 7.83e-24 | 99.0 |
| Msa0269590 | AT1G53660.2 | 80.208 | 192 | 32 | 1 | 1 | 186 | 19 | 210 | 1.92e-108 | 314 |
| Msa0269590 | AT1G53660.5 | 55.000 | 240 | 45 | 5 | 89 | 271 | 1 | 234 | 1.96e-75 | 230 |
| Msa0269590 | AT4G32390.1 | 35.780 | 327 | 140 | 6 | 9 | 267 | 16 | 340 | 2.88e-55 | 182 |
| Msa0269590 | AT2G25520.1 | 36.036 | 333 | 140 | 7 | 9 | 270 | 16 | 346 | 3.03e-55 | 182 |
| Msa0269590 | AT5G11230.1 | 34.911 | 338 | 147 | 5 | 9 | 275 | 16 | 351 | 1.25e-53 | 177 |
| Msa0269590 | AT3G17430.2 | 54.011 | 187 | 84 | 2 | 1 | 186 | 1 | 186 | 1.48e-53 | 178 |
| Msa0269590 | AT3G17430.2 | 36.842 | 95 | 55 | 2 | 187 | 276 | 245 | 339 | 1.69e-14 | 73.2 |
| Msa0269590 | AT3G17430.1 | 54.011 | 187 | 84 | 2 | 1 | 186 | 1 | 186 | 1.48e-53 | 178 |
| Msa0269590 | AT3G17430.1 | 36.842 | 95 | 55 | 2 | 187 | 276 | 245 | 339 | 1.69e-14 | 73.2 |
| Msa0269590 | AT1G48230.1 | 54.545 | 187 | 83 | 2 | 1 | 186 | 1 | 186 | 7.17e-49 | 166 |
| Msa0269590 | AT1G48230.1 | 37.363 | 91 | 55 | 1 | 187 | 275 | 245 | 335 | 3.34e-14 | 72.0 |
| Msa0269590 | AT5G25400.1 | 42.697 | 178 | 101 | 1 | 9 | 186 | 16 | 192 | 1.90e-42 | 149 |
| Msa0269590 | AT5G25400.1 | 43.333 | 90 | 50 | 1 | 187 | 276 | 252 | 340 | 4.21e-15 | 74.7 |
| Msa0269590 | AT1G48230.2 | 54.867 | 113 | 51 | 0 | 74 | 186 | 1 | 113 | 7.70e-31 | 117 |
| Msa0269590 | AT1G48230.2 | 37.363 | 91 | 55 | 1 | 187 | 275 | 172 | 262 | 2.65e-14 | 72.0 |
| Msa0269590 | AT1G06470.4 | 27.072 | 181 | 131 | 1 | 9 | 188 | 73 | 253 | 1.45e-11 | 64.7 |
| Msa0269590 | AT1G06470.2 | 27.072 | 181 | 131 | 1 | 9 | 188 | 73 | 253 | 1.45e-11 | 64.7 |
| Msa0269590 | AT1G06470.1 | 27.072 | 181 | 131 | 1 | 9 | 188 | 73 | 253 | 1.45e-11 | 64.7 |
| Msa0269590 | AT1G06470.3 | 27.072 | 181 | 131 | 1 | 9 | 188 | 73 | 253 | 1.45e-11 | 64.7 |
| Msa0269590 | AT1G21870.1 | 27.097 | 155 | 110 | 2 | 26 | 180 | 30 | 181 | 2.05e-11 | 63.9 |
| Msa0269590 | AT1G77610.1 | 27.097 | 155 | 110 | 2 | 26 | 180 | 24 | 175 | 2.10e-11 | 63.9 |
Find 57 sgRNAs with CRISPR-Local
Find 281 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAACAATCATCAATTTATT+TGG | 0.171281 | 2_3:-515756 | Msa0269590:CDS |
| TCTTTAATTACTCACATTTC+AGG | 0.218274 | 2_3:+517543 | None:intergenic |
| AATTTATTTGGTTACGGAAT+TGG | 0.268156 | 2_3:-515744 | Msa0269590:intron |
| ATCATGTCATTGATTAGTTT+TGG | 0.283357 | 2_3:-516283 | Msa0269590:CDS |
| CTTCTTCAGTAGTGCCAATT+GGG | 0.295388 | 2_3:-516721 | Msa0269590:CDS |
| GCTTTAACCATTCGTGTTGC+TGG | 0.308224 | 2_3:-515837 | Msa0269590:CDS |
| ATGGTGAGATAAATATAAAC+TGG | 0.316407 | 2_3:-516243 | Msa0269590:CDS |
| TAATAACTTCAAGTTGAAAA+AGG | 0.338824 | 2_3:-514874 | Msa0269590:CDS |
| GGAGTTCTAGTAGCTTCTTA+TGG | 0.357987 | 2_3:-516262 | Msa0269590:CDS |
| TGCTGGAGTTGTTAAGGATT+GGG | 0.362847 | 2_3:-515820 | Msa0269590:CDS |
| ATCATCAATTTATTTGGTTA+CGG | 0.367666 | 2_3:-515750 | Msa0269590:CDS |
| AAGGCTGAGATTCCTGCCTT+TGG | 0.369517 | 2_3:+514805 | None:intergenic |
| AATTAACTTTCCTTATCCTT+TGG | 0.374642 | 2_3:-517738 | Msa0269590:CDS |
| AGGCTGAGATTCCTGCCTTT+GGG | 0.384215 | 2_3:+514806 | None:intergenic |
| GCTTCTTCAGTAGTGCCAAT+TGG | 0.403232 | 2_3:-516722 | Msa0269590:CDS |
| TCGTGTTGCTGGAGTTGTTA+AGG | 0.405129 | 2_3:-515826 | Msa0269590:CDS |
| AAAACTTACCTTTAGAACTT+TGG | 0.405574 | 2_3:+517664 | None:intergenic |
| CACCGACAACACCTCCCATT+TGG | 0.408580 | 2_3:+516206 | None:intergenic |
| TGTATTAACCAAAGTTCTAA+AGG | 0.413172 | 2_3:-517672 | Msa0269590:intron |
| AACAAGCTCAGAAGCATTTG+AGG | 0.419806 | 2_3:+514836 | None:intergenic |
| CCATGTTTGCAATGACACTT+TGG | 0.429649 | 2_3:-516697 | Msa0269590:CDS |
| AGCTCTAAGACTTATCTTCA+TGG | 0.442399 | 2_3:-516182 | Msa0269590:CDS |
| CGTATAATCCTCCGTTCAAA+AGG | 0.449756 | 2_3:-519087 | Msa0269590:five_prime_UTR |
| TCAGAAGCATTTGAGGAGTC+AGG | 0.451298 | 2_3:+514843 | None:intergenic |
| TTGCTGGAGTTGTTAAGGAT+TGG | 0.451598 | 2_3:-515821 | Msa0269590:CDS |
| AATATTTATTCAGCCATTGC+AGG | 0.452569 | 2_3:-514909 | Msa0269590:intron |
| AGAGTCAATGCCAAAGGATA+AGG | 0.455292 | 2_3:+517728 | None:intergenic |
| CAAATGCAACAGAAATATAC+AGG | 0.468219 | 2_3:+516657 | None:intergenic |
| GAGATAAATATAAACTGGGT+TGG | 0.473059 | 2_3:-516238 | Msa0269590:CDS |
| TACCAAATGGGAGGTGTTGT+CGG | 0.484375 | 2_3:-516208 | Msa0269590:CDS |
| ATTGCAAACATGGCCCCAAT+TGG | 0.490984 | 2_3:+516707 | None:intergenic |
| GGTTGGAGTAGTTTACCAAA+TGG | 0.498532 | 2_3:-516221 | Msa0269590:CDS |
| GTTGAAGAAGATTTGACCGC+TGG | 0.521002 | 2_3:+518823 | None:intergenic |
| TTTGCAATGACACTTTGGCT+TGG | 0.522777 | 2_3:-516692 | Msa0269590:CDS |
| CCAAAGTGTCATTGCAAACA+TGG | 0.524949 | 2_3:+516697 | None:intergenic |
| GTTGGAGTAGTTTACCAAAT+GGG | 0.525406 | 2_3:-516220 | Msa0269590:CDS |
| GGCATTGACTCTACTTCACA+TGG | 0.530196 | 2_3:-517717 | Msa0269590:CDS |
| AAACAGAAAGAAGACGAAGA+AGG | 0.531803 | 2_3:+519038 | None:intergenic |
| TTTGTGCTTGGAGTAGCCGC+AGG | 0.570601 | 2_3:-516337 | Msa0269590:CDS |
| CACTTGTGTGTGAAATCACA+AGG | 0.571090 | 2_3:+515859 | None:intergenic |
| TGTTGAATCTACCCAAAGGC+AGG | 0.571557 | 2_3:-514817 | Msa0269590:CDS |
| TGGAGTTGTTAAGGATTGGG+TGG | 0.576236 | 2_3:-515817 | Msa0269590:CDS |
| TGGAGTAGCCGCAGGACTCG+AGG | 0.577487 | 2_3:-516329 | Msa0269590:CDS |
| CGGTCAAATCTTCTTCAACA+AGG | 0.578055 | 2_3:-518819 | Msa0269590:intron |
| ATGGCGGATCGTAAGAATGA+AGG | 0.581580 | 2_3:-518887 | Msa0269590:CDS |
| CTCTACATTGCTCTCTCCAG+CGG | 0.583803 | 2_3:-518839 | Msa0269590:CDS |
| GTAGAGAAGAAGATAAGCGT+AGG | 0.602991 | 2_3:+518856 | None:intergenic |
| TTCTTCAGTAGTGCCAATTG+GGG | 0.621525 | 2_3:-516720 | Msa0269590:CDS |
| TGAAGTAGAGTCAATGCCAA+AGG | 0.622034 | 2_3:+517722 | None:intergenic |
| AACAACTCCAGCAACACGAA+TGG | 0.626238 | 2_3:+515830 | None:intergenic |
| ATATGCTGCTACACCTGCAA+TGG | 0.626595 | 2_3:+514896 | None:intergenic |
| TGGTGAGATAAATATAAACT+GGG | 0.629813 | 2_3:-516242 | Msa0269590:CDS |
| TGCATTTGCACAAATGCTGA+AGG | 0.631234 | 2_3:-516642 | Msa0269590:CDS |
| GGAGTAGTTTACCAAATGGG+AGG | 0.646209 | 2_3:-516217 | Msa0269590:CDS |
| AGCTTGTTGAATCTACCCAA+AGG | 0.647675 | 2_3:-514821 | Msa0269590:CDS |
| TGCAACAGAAATATACAGGT+AGG | 0.669178 | 2_3:+516661 | None:intergenic |
| GCTCATCACCTCGAGTCCTG+CGG | 0.678078 | 2_3:+516321 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATAAATTCAAATTGTTT+TGG | - | chr2_3:515103-515122 | Msa0269590:intron | 10.0% |
| !! | TTTAATGAAATCAATTATTA+AGG | + | chr2_3:516503-516522 | None:intergenic | 10.0% |
| !!! | AGGATTAGTTTTTTTTTTTT+AGG | - | chr2_3:514604-514623 | Msa0269590:intron | 15.0% |
| !! | CAATAAAATTGTACAAAAAT+TGG | + | chr2_3:514861-514880 | None:intergenic | 15.0% |
| !!! | CAATTTTTGTACAATTTTAT+TGG | - | chr2_3:514859-514878 | Msa0269590:CDS | 15.0% |
| !!! | TCATTGATTAATTTCTTAAT+TGG | - | chr2_3:514971-514990 | Msa0269590:intron | 15.0% |
| !! | ATTAATTATATGTTTCTTGT+AGG | - | chr2_3:515710-515729 | Msa0269590:intron | 15.0% |
| !!! | CAAATTAATTTCTATGTTTT+AGG | - | chr2_3:516203-516222 | Msa0269590:CDS | 15.0% |
| !! | TCAATAAAAAAAATCCAAAT+GGG | + | chr2_3:516324-516343 | None:intergenic | 15.0% |
| !! | ATCAATAAAAAAAATCCAAA+TGG | + | chr2_3:516325-516344 | None:intergenic | 15.0% |
| !! | TTAACAATCATCAATTTATT+TGG | - | chr2_3:517546-517565 | Msa0269590:intron | 15.0% |
| !! | TACTCAAATTAAAAGTTAAA+TGG | - | chr2_3:518254-518273 | Msa0269590:intron | 15.0% |
| !!! | GCTTTTTTGTTTAATTGAAA+TGG | - | chr2_3:514784-514803 | Msa0269590:intron | 20.0% |
| !!! | AATGTAATGCATTTTCTTTA+TGG | - | chr2_3:515343-515362 | Msa0269590:intron | 20.0% |
| !!! | TAAAGGTAAGTTTTAATGTT+TGG | - | chr2_3:515647-515666 | Msa0269590:intron | 20.0% |
| !! | GTAGATTATAGCTTATTTAT+AGG | - | chr2_3:515790-515809 | Msa0269590:CDS | 20.0% |
| !!! | TATTTATAGGTTTTCATGTA+TGG | - | chr2_3:515803-515822 | Msa0269590:CDS | 20.0% |
| !!! | ATTTATAGGTTTTCATGTAT+GGG | - | chr2_3:515804-515823 | Msa0269590:CDS | 20.0% |
| !!! | TTTCTTTAGTTTTGTGAATA+TGG | - | chr2_3:516363-516382 | Msa0269590:intron | 20.0% |
| !!! | TTCTTTAGTTTTGTGAATAT+GGG | - | chr2_3:516364-516383 | Msa0269590:intron | 20.0% |
| !! | GTAAGATATATAATTACAAC+TGG | + | chr2_3:516547-516566 | None:intergenic | 20.0% |
| !!! | TGTTATTTTCAACAATAGTT+AGG | - | chr2_3:516713-516732 | Msa0269590:CDS | 20.0% |
| !! | AACTAGAAATCATACATAAA+TGG | + | chr2_3:516748-516767 | None:intergenic | 20.0% |
| !! | TTTAAAAGAATCAGATTTGT+TGG | - | chr2_3:516811-516830 | Msa0269590:intron | 20.0% |
| !!! | TCATGGAAATTTTTGTTAAA+CGG | - | chr2_3:517137-517156 | Msa0269590:intron | 20.0% |
| !! | ATCATCAATTTATTTGGTTA+CGG | - | chr2_3:517552-517571 | Msa0269590:intron | 20.0% |
| !! | AAAGATAATTAAACAATCCA+GGG | - | chr2_3:517681-517700 | Msa0269590:CDS | 20.0% |
| !!! | TTTTGTTTATCGACATTTAT+TGG | - | chr2_3:517913-517932 | Msa0269590:intron | 20.0% |
| !!! | TTTTCCTATAAATAATGTGT+CGG | - | chr2_3:517962-517981 | Msa0269590:intron | 20.0% |
| !!! | TACAAATTAGATTAGTTGTA+AGG | - | chr2_3:518284-518303 | Msa0269590:intron | 20.0% |
| !!! | TAATAACTTCAAGTTGAAAA+AGG | - | chr2_3:518428-518447 | Msa0269590:intron | 20.0% |
| !! | GTATAAAAAGAAACACTATA+AGG | + | chr2_3:518611-518630 | None:intergenic | 20.0% |
| !!! | TATACAGCATTTTTTATGAT+TGG | - | chr2_3:518987-519006 | Msa0269590:five_prime_UTR | 20.0% |
| !!! | ATACAGCATTTTTTATGATT+GGG | - | chr2_3:518988-519007 | Msa0269590:five_prime_UTR | 20.0% |
| !!! | TAGGTTAGTTGAATTTTTTG+AGG | - | chr2_3:514623-514642 | Msa0269590:intron | 25.0% |
| !!! | TTGGTTTTGCTTTAGAATTA+TGG | - | chr2_3:514990-515009 | Msa0269590:intron | 25.0% |
| !!! | TTTAGAATTATGGTCTTGTT+TGG | - | chr2_3:515000-515019 | Msa0269590:intron | 25.0% |
| ! | ACAGTAGATAAGTTCAAATA+AGG | - | chr2_3:515255-515274 | Msa0269590:intron | 25.0% |
| !! | CTCAAATCAAACATACTTTT+TGG | + | chr2_3:515285-515304 | None:intergenic | 25.0% |
| !!! | AGTATGTTTGATTTGAGAAA+TGG | - | chr2_3:515288-515307 | Msa0269590:intron | 25.0% |
| !! | AATGCATTTTCTTTATGGTT+TGG | - | chr2_3:515348-515367 | Msa0269590:intron | 25.0% |
| ! | AATTAACTTTCCTTATCCTT+TGG | - | chr2_3:515564-515583 | Msa0269590:intron | 25.0% |
| !! | TGTATTAACCAAAGTTCTAA+AGG | - | chr2_3:515630-515649 | Msa0269590:intron | 25.0% |
| !!! | AAAACTTACCTTTAGAACTT+TGG | + | chr2_3:515641-515660 | None:intergenic | 25.0% |
| ! | TCTTTAATTACTCACATTTC+AGG | + | chr2_3:515762-515781 | None:intergenic | 25.0% |
| ! | TCACTAGAATGTTAAAAAGT+GGG | - | chr2_3:515861-515880 | Msa0269590:CDS | 25.0% |
| !!! | ATCAAGAAGATATTTTTCGA+GGG | - | chr2_3:516056-516075 | Msa0269590:intron | 25.0% |
| ! | TAGAGTAACTATGAAACAAA+TGG | + | chr2_3:516183-516202 | None:intergenic | 25.0% |
| !!! | TTAGTTTTCAAAACAAACTG+TGG | + | chr2_3:516237-516256 | None:intergenic | 25.0% |
| ! | TCTTACATTTATTGACATCA+AGG | - | chr2_3:516470-516489 | Msa0269590:intron | 25.0% |
| ! | ATATAATTACAACTGGAACT+TGG | + | chr2_3:516540-516559 | None:intergenic | 25.0% |
| !!! | GATTTCTAGTTATTTTCCAA+TGG | - | chr2_3:516757-516776 | Msa0269590:intron | 25.0% |
| !! | TTTTCCAATGGTAATCTTAA+TGG | - | chr2_3:516769-516788 | Msa0269590:intron | 25.0% |
| !!! | ATCATGTCATTGATTAGTTT+TGG | - | chr2_3:517019-517038 | Msa0269590:intron | 25.0% |
| ! | ATGGTGAGATAAATATAAAC+TGG | - | chr2_3:517059-517078 | Msa0269590:intron | 25.0% |
| ! | TGGTGAGATAAATATAAACT+GGG | - | chr2_3:517060-517079 | Msa0269590:intron | 25.0% |
| !! | GAAATTTTTGTTAAACGGAA+GGG | - | chr2_3:517142-517161 | Msa0269590:intron | 25.0% |
| ! | AATTTATTTGGTTACGGAAT+TGG | - | chr2_3:517558-517577 | Msa0269590:CDS | 25.0% |
| ! | ATGAGAAAGGAAAATTTAGA+AGG | + | chr2_3:517605-517624 | None:intergenic | 25.0% |
| ! | ATGTTAAGAAAAATCCTCAA+GGG | + | chr2_3:517636-517655 | None:intergenic | 25.0% |
| ! | AATGTTAAGAAAAATCCTCA+AGG | + | chr2_3:517637-517656 | None:intergenic | 25.0% |
| ! | CAAAGATAATTAAACAATCC+AGG | - | chr2_3:517680-517699 | Msa0269590:CDS | 25.0% |
| ! | TTATATAAAGGGACAAAAAG+AGG | + | chr2_3:517845-517864 | None:intergenic | 25.0% |
| !! | TCTTTTTGTCCCTTTATATA+AGG | - | chr2_3:517844-517863 | Msa0269590:intron | 25.0% |
| !! | CTTTTTGTCCCTTTATATAA+GGG | - | chr2_3:517845-517864 | Msa0269590:intron | 25.0% |
| ! | AAATCCGACACATTATTTAT+AGG | + | chr2_3:517969-517988 | None:intergenic | 25.0% |
| ! | ATAAGGAAAAGCAAAAATGT+GGG | + | chr2_3:518594-518613 | None:intergenic | 25.0% |
| ! | TATAAGGAAAAGCAAAAATG+TGG | + | chr2_3:518595-518614 | None:intergenic | 25.0% |
| ! | GTCTTATAAACAATTTCAGT+CGG | - | chr2_3:518760-518779 | Msa0269590:intron | 25.0% |
| ! | TCTTATAAACAATTTCAGTC+GGG | - | chr2_3:518761-518780 | Msa0269590:intron | 25.0% |
| !!! | TCTCTTTGTTTTTGCAACAA+TGG | - | chr2_3:514396-514415 | Msa0269590:intron | 30.0% |
| AAACAAGTAAAGCATGCAAA+AGG | + | chr2_3:514527-514546 | None:intergenic | 30.0% | |
| !! | TCTGTGTTGATTTATAAGCT+AGG | - | chr2_3:514584-514603 | Msa0269590:intron | 30.0% |
| ! | ATTGTGTTGTTGATTGGAAT+TGG | - | chr2_3:514646-514665 | Msa0269590:intron | 30.0% |
| GATGCTGATGAATCAAATTA+AGG | - | chr2_3:514684-514703 | Msa0269590:intron | 30.0% | |
| ! | ATGGAAATGTTGTCTGAAAT+AGG | - | chr2_3:514803-514822 | Msa0269590:CDS | 30.0% |
| ! | TGGAAATGTTGTCTGAAATA+GGG | - | chr2_3:514804-514823 | Msa0269590:CDS | 30.0% |
| ! | TTGATTTGAGAAATGGATGA+AGG | - | chr2_3:515295-515314 | Msa0269590:intron | 30.0% |
| AAGTATTATTGTGTCCTGTT+TGG | - | chr2_3:515393-515412 | Msa0269590:intron | 30.0% | |
| GCATAAATCTATAACCAAAC+AGG | + | chr2_3:515410-515429 | None:intergenic | 30.0% | |
| GTTGTTATGTATCTATCTGA+TGG | - | chr2_3:515484-515503 | Msa0269590:intron | 30.0% | |
| !! | TGTTTGGTGTAATGTGTTAT+TGG | - | chr2_3:515663-515682 | Msa0269590:intron | 30.0% |
| !! | ATGTTTCTTGTAGGTTTTGA+AGG | - | chr2_3:515719-515738 | Msa0269590:intron | 30.0% |
| ! | GTTTTCATGTATGGGTATTT+TGG | - | chr2_3:515812-515831 | Msa0269590:CDS | 30.0% |
| GTCACTAGAATGTTAAAAAG+TGG | - | chr2_3:515860-515879 | Msa0269590:CDS | 30.0% | |
| ! | TTAGCTGCAAATTTTCAGTA+TGG | - | chr2_3:515935-515954 | Msa0269590:intron | 30.0% |
| !!! | TGACAGATTTTGGGATTAAT+GGG | + | chr2_3:515981-516000 | None:intergenic | 30.0% |
| CTCGAAAAATATCTTCTTGA+TGG | + | chr2_3:516057-516076 | None:intergenic | 30.0% | |
| ! | CATCAAGAAGATATTTTTCG+AGG | - | chr2_3:516055-516074 | Msa0269590:intron | 30.0% |
| AACAAAGATGCAGAAATTTC+TGG | + | chr2_3:516294-516313 | None:intergenic | 30.0% | |
| ! | TTTCTGCATCTTTGTTGATT+AGG | - | chr2_3:516298-516317 | Msa0269590:CDS | 30.0% |
| !!! | TTAGTTTTGTGAATATGGGT+TGG | - | chr2_3:516368-516387 | Msa0269590:intron | 30.0% |
| !!! | TAGTTTTGTGAATATGGGTT+GGG | - | chr2_3:516369-516388 | Msa0269590:intron | 30.0% |
| CAAATGCAACAGAAATATAC+AGG | + | chr2_3:516648-516667 | None:intergenic | 30.0% | |
| TTAGCCATTAAGATTACCAT+TGG | + | chr2_3:516776-516795 | None:intergenic | 30.0% | |
| GAGATAAATATAAACTGGGT+TGG | - | chr2_3:517064-517083 | Msa0269590:intron | 30.0% | |
| ! | GGAAATTTTTGTTAAACGGA+AGG | - | chr2_3:517141-517160 | Msa0269590:intron | 30.0% |
| !! | ACATAATACATGACGGATAT+AGG | + | chr2_3:517181-517200 | None:intergenic | 30.0% |
| CAATTGAGGATAAGTATAAC+AGG | + | chr2_3:517390-517409 | None:intergenic | 30.0% | |
| AAGGGATTATCAAATGAGAA+AGG | + | chr2_3:517618-517637 | None:intergenic | 30.0% | |
| TTTATTGGTCAAAGTGGTAA+TGG | - | chr2_3:517928-517947 | Msa0269590:intron | 30.0% | |
| !!! | CTTTTTTACGATTTGAGACT+CGG | + | chr2_3:518106-518125 | None:intergenic | 30.0% |
| ACAGTATTTGTACTTCTGTA+AGG | + | chr2_3:518235-518254 | None:intergenic | 30.0% | |
| ! | ATTAGATTAGTTGTAAGGCT+TGG | - | chr2_3:518289-518308 | Msa0269590:intron | 30.0% |
| AATATTTATTCAGCCATTGC+AGG | - | chr2_3:518393-518412 | Msa0269590:intron | 30.0% | |
| ATACATACATTGAGTACTTC+AGG | + | chr2_3:518543-518562 | None:intergenic | 30.0% | |
| ATCTACTATTTGTTCCCATA+GGG | + | chr2_3:518650-518669 | None:intergenic | 30.0% | |
| TATCTACTATTTGTTCCCAT+AGG | + | chr2_3:518651-518670 | None:intergenic | 30.0% | |
| ! | ATAGATATAAACAAGCGTTG+TGG | - | chr2_3:518727-518746 | Msa0269590:intron | 30.0% |
| TTGTCAAAATTCAAATGCCA+TGG | + | chr2_3:518868-518887 | None:intergenic | 30.0% | |
| ATTATCACTCTGGATAACTT+TGG | + | chr2_3:518893-518912 | None:intergenic | 30.0% | |
| GCTTCAAAAAATTATCACTC+TGG | + | chr2_3:518903-518922 | None:intergenic | 30.0% | |
| TGAATCACTAAGATTGAAAC+TGG | + | chr2_3:518931-518950 | None:intergenic | 30.0% | |
| CATAAAAAATGCTGTATACC+CGG | + | chr2_3:518985-519004 | None:intergenic | 30.0% | |
| !!! | ATTTTTTATGATTGGGCCTT+TGG | - | chr2_3:518995-519014 | Msa0269590:five_prime_UTR | 30.0% |
| !!! | TTTTTTATGATTGGGCCTTT+GGG | - | chr2_3:518996-519015 | Msa0269590:five_prime_UTR | 30.0% |
| ! | ACAACTCAGATCCTTTTGAA+CGG | + | chr2_3:514229-514248 | None:intergenic | 35.0% |
| AAACAGAAAGAAGACGAAGA+AGG | + | chr2_3:514267-514286 | None:intergenic | 35.0% | |
| !!! | CTTTGTTTTTGCAACAATGG+CGG | - | chr2_3:514399-514418 | Msa0269590:intron | 35.0% |
| GCAAAAGGAAGAAGAATGAA+AGG | + | chr2_3:514512-514531 | None:intergenic | 35.0% | |
| ! | TTGAGGATTGTGTTGTTGAT+TGG | - | chr2_3:514640-514659 | Msa0269590:intron | 35.0% |
| !!! | GTTTTTTGTTTGTGTGTGTG+TGG | - | chr2_3:514881-514900 | Msa0269590:CDS | 35.0% |
| GCTGTTCTCATAAGTTATCT+TGG | - | chr2_3:515138-515157 | Msa0269590:intron | 35.0% | |
| !! | TTAAGTCTTGTTAGACTGTC+TGG | + | chr2_3:515234-515253 | None:intergenic | 35.0% |
| AGGACACAATAATACTTCCA+AGG | + | chr2_3:515390-515409 | None:intergenic | 35.0% | |
| !! | TACAATTTTGTTGTCTGCAG+TGG | - | chr2_3:515524-515543 | Msa0269590:intron | 35.0% |
| !! | ACAATTTTGTTGTCTGCAGT+GGG | - | chr2_3:515525-515544 | Msa0269590:intron | 35.0% |
| !!! | GTGACAGATTTTGGGATTAA+TGG | + | chr2_3:515982-516001 | None:intergenic | 35.0% |
| GTACCTTATAAGACATGTGT+GGG | + | chr2_3:516004-516023 | None:intergenic | 35.0% | |
| AGTACCTTATAAGACATGTG+TGG | + | chr2_3:516005-516024 | None:intergenic | 35.0% | |
| TCCTGTGAACTAGTTCAAAA+TGG | - | chr2_3:516106-516125 | Msa0269590:intron | 35.0% | |
| ! | TCCATTTTGAACTAGTTCAC+AGG | + | chr2_3:516110-516129 | None:intergenic | 35.0% |
| TACACCTTCAGTATTTGTGT+TGG | - | chr2_3:516134-516153 | Msa0269590:intron | 35.0% | |
| ATTGCCAACACAAATACTGA+AGG | + | chr2_3:516141-516160 | None:intergenic | 35.0% | |
| TGCAACAGAAATATACAGGT+AGG | + | chr2_3:516644-516663 | None:intergenic | 35.0% | |
| TCATAAACTGTACACAGTCA+GGG | + | chr2_3:516849-516868 | None:intergenic | 35.0% | |
| ATCATAAACTGTACACAGTC+AGG | + | chr2_3:516850-516869 | None:intergenic | 35.0% | |
| GTTGGAGTAGTTTACCAAAT+GGG | - | chr2_3:517082-517101 | Msa0269590:intron | 35.0% | |
| !! | AGCTCTAAGACTTATCTTCA+TGG | - | chr2_3:517120-517139 | Msa0269590:intron | 35.0% |
| GGGACTAACATAATACATGA+CGG | + | chr2_3:517188-517207 | None:intergenic | 35.0% | |
| ATGCTTTGTGTGTATATCGA+TGG | - | chr2_3:517258-517277 | Msa0269590:intron | 35.0% | |
| ! | CACTTTGTTTATTCCTTCCA+TGG | - | chr2_3:517313-517332 | Msa0269590:intron | 35.0% |
| ! | TCTCTAGAAATATCCATGGA+AGG | + | chr2_3:517329-517348 | None:intergenic | 35.0% |
| ! | GATCTCTCTAGAAATATCCA+TGG | + | chr2_3:517333-517352 | None:intergenic | 35.0% |
| ! | ATTTCTAGAGAGATCGAAGA+TGG | - | chr2_3:517338-517357 | Msa0269590:intron | 35.0% |
| TGAGGATAAGTATAACAGGT+GGG | + | chr2_3:517386-517405 | None:intergenic | 35.0% | |
| TTGAGGATAAGTATAACAGG+TGG | + | chr2_3:517387-517406 | None:intergenic | 35.0% | |
| ! | AGTTTAGAGCAAAAGTGCAA+AGG | + | chr2_3:517413-517432 | None:intergenic | 35.0% |
| ! | TCTCATTTGATAATCCCTTG+AGG | - | chr2_3:517619-517638 | Msa0269590:intron | 35.0% |
| ATGTATGTTAACAAGCACAC+AGG | + | chr2_3:517743-517762 | None:intergenic | 35.0% | |
| AAGGCATGTATTTGTTTGCT+AGG | + | chr2_3:517769-517788 | None:intergenic | 35.0% | |
| ! | AGATTTGCTCACAACAATGT+CGG | + | chr2_3:517797-517816 | None:intergenic | 35.0% |
| TCTTAGATCAAACAACAGTC+AGG | - | chr2_3:517814-517833 | Msa0269590:intron | 35.0% | |
| TACCCACACCCTTATATAAA+GGG | + | chr2_3:517856-517875 | None:intergenic | 35.0% | |
| TCGACATTTATTGGTCAAAG+TGG | - | chr2_3:517922-517941 | Msa0269590:intron | 35.0% | |
| TTATACATACGCACTGTCAT+TGG | - | chr2_3:518009-518028 | Msa0269590:intron | 35.0% | |
| TATACATACGCACTGTCATT+GGG | - | chr2_3:518010-518029 | Msa0269590:intron | 35.0% | |
| TCGGCATCTATAAAACACTT+CGG | + | chr2_3:518087-518106 | None:intergenic | 35.0% | |
| CGTAAAAAAGTTACTGTGTC+TGG | - | chr2_3:518116-518135 | Msa0269590:intron | 35.0% | |
| TACTCACTGATGTACTAGTT+TGG | - | chr2_3:518145-518164 | Msa0269590:intron | 35.0% | |
| ! | TGATGTACTAGTTTGGAGTT+TGG | - | chr2_3:518152-518171 | Msa0269590:intron | 35.0% |
| TTGTGGAGCTGATTAAATGT+TGG | - | chr2_3:518183-518202 | Msa0269590:intron | 35.0% | |
| TGCTGCTATCTACTTACTAA+AGG | + | chr2_3:518519-518538 | None:intergenic | 35.0% | |
| GCAAAAATGTGGGAAGAAAA+AGG | + | chr2_3:518584-518603 | None:intergenic | 35.0% | |
| AACTTTGTCCTTTCAAACAC+AGG | - | chr2_3:518835-518854 | Msa0269590:CDS | 35.0% | |
| GATGATCAAGATTATGAGTC+CGG | - | chr2_3:518963-518982 | Msa0269590:five_prime_UTR | 35.0% | |
| ATGATCAAGATTATGAGTCC+GGG | - | chr2_3:518964-518983 | Msa0269590:five_prime_UTR | 35.0% | |
| GTAGAGAAGAAGATAAGCGT+AGG | + | chr2_3:514449-514468 | None:intergenic | 40.0% | |
| CGGTCAAATCTTCTTCAACA+AGG | - | chr2_3:514483-514502 | Msa0269590:intron | 40.0% | |
| TTTGTTTGTGTGTGTGTGGA+TGG | - | chr2_3:514885-514904 | Msa0269590:CDS | 40.0% | |
| !! | AAACAACAAGCACTGACGTA+AGG | + | chr2_3:514942-514961 | None:intergenic | 40.0% |
| !! | TTACGTCAGTGCTTGTTGTT+TGG | - | chr2_3:514941-514960 | Msa0269590:intron | 40.0% |
| !! | CAGTGCTTGTTGTTTGGAAT+TGG | - | chr2_3:514947-514966 | Msa0269590:intron | 40.0% |
| AGAGTCAATGCCAAAGGATA+AGG | + | chr2_3:515577-515596 | None:intergenic | 40.0% | |
| TGAAGTAGAGTCAATGCCAA+AGG | + | chr2_3:515583-515602 | None:intergenic | 40.0% | |
| !!! | CTTGTAGGTTTTGAAGGTTG+AGG | - | chr2_3:515725-515744 | Msa0269590:intron | 40.0% |
| !!! | TAGGTTTTGAAGGTTGAGGA+GGG | - | chr2_3:515729-515748 | Msa0269590:intron | 40.0% |
| !! | TTGGTTTTCCTTACTTTCGC+TGG | - | chr2_3:515831-515850 | Msa0269590:CDS | 40.0% |
| ! | GATTAATGGGTCAAAGCTGA+AGG | + | chr2_3:515968-515987 | None:intergenic | 40.0% |
| ! | ATGTGTGGGTGACAGATTTT+GGG | + | chr2_3:515990-516009 | None:intergenic | 40.0% |
| TCACCCACACATGTCTTATA+AGG | - | chr2_3:515998-516017 | Msa0269590:intron | 40.0% | |
| !! | GTGTTGGCAATTTTCAGACT+AGG | - | chr2_3:516150-516169 | Msa0269590:intron | 40.0% |
| ! | CTTTGTTGATTAGGCCCATT+TGG | - | chr2_3:516307-516326 | Msa0269590:CDS | 40.0% |
| CTTCTTCAGTAGTGCCAATT+GGG | - | chr2_3:516581-516600 | Msa0269590:intron | 40.0% | |
| TTCTTCAGTAGTGCCAATTG+GGG | - | chr2_3:516582-516601 | Msa0269590:intron | 40.0% | |
| ! | CCAAAGTGTCATTGCAAACA+TGG | + | chr2_3:516608-516627 | None:intergenic | 40.0% |
| CCATGTTTGCAATGACACTT+TGG | - | chr2_3:516605-516624 | Msa0269590:intron | 40.0% | |
| TTTGCAATGACACTTTGGCT+TGG | - | chr2_3:516610-516629 | Msa0269590:intron | 40.0% | |
| TGCATTTGCACAAATGCTGA+AGG | - | chr2_3:516660-516679 | Msa0269590:CDS | 40.0% | |
| CTTGCAATTAGTTGCAGTTC+TGG | + | chr2_3:516900-516919 | None:intergenic | 40.0% | |
| ! | GGAGTTCTAGTAGCTTCTTA+TGG | - | chr2_3:517040-517059 | Msa0269590:intron | 40.0% |
| GGTTGGAGTAGTTTACCAAA+TGG | - | chr2_3:517081-517100 | Msa0269590:intron | 40.0% | |
| TGTATTATGTTAGTCCCTGC+AGG | - | chr2_3:517191-517210 | Msa0269590:intron | 40.0% | |
| ! | CAAAAGTGCAAAGGCAATTG+AGG | + | chr2_3:517404-517423 | None:intergenic | 40.0% |
| CACTTGTGTGTGAAATCACA+AGG | + | chr2_3:517446-517465 | None:intergenic | 40.0% | |
| TTGCTGGAGTTGTTAAGGAT+TGG | - | chr2_3:517481-517500 | Msa0269590:intron | 40.0% | |
| TGCTGGAGTTGTTAAGGATT+GGG | - | chr2_3:517482-517501 | Msa0269590:intron | 40.0% | |
| ATTAAACAATCCAGGGACGT+TGG | - | chr2_3:517688-517707 | Msa0269590:CDS | 40.0% | |
| ACGTTGGATAGTCCAGTATT+AGG | - | chr2_3:517704-517723 | Msa0269590:CDS | 40.0% | |
| CACAACAATGTCGGAAATGA+AGG | + | chr2_3:517788-517807 | None:intergenic | 40.0% | |
| TGTCCCTTTATATAAGGGTG+TGG | - | chr2_3:517850-517869 | Msa0269590:intron | 40.0% | |
| ! | GTCCCTTTATATAAGGGTGT+GGG | - | chr2_3:517851-517870 | Msa0269590:intron | 40.0% |
| GTACCCACACCCTTATATAA+AGG | + | chr2_3:517857-517876 | None:intergenic | 40.0% | |
| TGTGTCGGATTTAAGTCTTG+TGG | - | chr2_3:517977-517996 | Msa0269590:intron | 40.0% | |
| GGAGAGATTTATCCCTAAGT+GGG | - | chr2_3:518031-518050 | Msa0269590:intron | 40.0% | |
| !! | AACAAGCTCAGAAGCATTTG+AGG | + | chr2_3:518469-518488 | None:intergenic | 40.0% |
| !! | AGCTTGTTGAATCTACCCAA+AGG | - | chr2_3:518481-518500 | Msa0269590:intron | 40.0% |
| ATAGGGCATGAACAACTAGA+AGG | + | chr2_3:518633-518652 | None:intergenic | 40.0% | |
| ! | TTCTAGTTGTTCATGCCCTA+TGG | - | chr2_3:518632-518651 | Msa0269590:intron | 40.0% |
| TCTAGTTGTTCATGCCCTAT+GGG | - | chr2_3:518633-518652 | Msa0269590:intron | 40.0% | |
| CTGAATGCAGTACAAAAACC+TGG | + | chr2_3:519028-519047 | None:intergenic | 40.0% | |
| ! | ACTCAGATCCTTTTGAACGG+AGG | + | chr2_3:514226-514245 | None:intergenic | 45.0% |
| !! | ATGGCGGATCGTAAGAATGA+AGG | - | chr2_3:514415-514434 | Msa0269590:intron | 45.0% |
| GTTGAAGAAGATTTGACCGC+TGG | + | chr2_3:514482-514501 | None:intergenic | 45.0% | |
| TGGTGGAATGCTTGTGGTAA+TGG | - | chr2_3:514905-514924 | Msa0269590:intron | 45.0% | |
| !! | TGCTTGTGGTAATGGAACAC+TGG | - | chr2_3:514913-514932 | Msa0269590:intron | 45.0% |
| !! | GCTTGTGGTAATGGAACACT+GGG | - | chr2_3:514914-514933 | Msa0269590:intron | 45.0% |
| !! | GCTGTCTTTTGAGTGATCCT+TGG | - | chr2_3:515370-515389 | Msa0269590:intron | 45.0% |
| !! | GCAGTGGGTTTTGTCTTCTA+AGG | - | chr2_3:515540-515559 | Msa0269590:intron | 45.0% |
| !! | GGCATTGACTCTACTTCACA+TGG | - | chr2_3:515585-515604 | Msa0269590:intron | 45.0% |
| !!! | GTAGGTTTTGAAGGTTGAGG+AGG | - | chr2_3:515728-515747 | Msa0269590:intron | 45.0% |
| ! | CATGTGTGGGTGACAGATTT+TGG | + | chr2_3:515991-516010 | None:intergenic | 45.0% |
| !! | GATGCAGAAATTTCTGGAGC+TGG | + | chr2_3:516288-516307 | None:intergenic | 45.0% |
| !! | TTTGTGAATATGGGTTGGGC+TGG | - | chr2_3:516373-516392 | Msa0269590:intron | 45.0% |
| !! | TTGGGCTGGTTAAATGCTTG+TGG | - | chr2_3:516387-516406 | Msa0269590:intron | 45.0% |
| TACACATAGACAATCGCACG+CGG | + | chr2_3:516428-516447 | None:intergenic | 45.0% | |
| GCTTCTTCAGTAGTGCCAAT+TGG | - | chr2_3:516580-516599 | Msa0269590:intron | 45.0% | |
| ATTGCAAACATGGCCCCAAT+TGG | + | chr2_3:516598-516617 | None:intergenic | 45.0% | |
| !! | GCAGTTCTGGAGGATAAGTA+TGG | + | chr2_3:516887-516906 | None:intergenic | 45.0% |
| ! | GCAATTAGTTGCAGTTCTGG+AGG | + | chr2_3:516897-516916 | None:intergenic | 45.0% |
| CCAAGCACAAAAACAGCTAC+AGG | + | chr2_3:516956-516975 | None:intergenic | 45.0% | |
| !!! | CCTGTAGCTGTTTTTGTGCT+TGG | - | chr2_3:516953-516972 | Msa0269590:intron | 45.0% |
| GGAGTAGTTTACCAAATGGG+AGG | - | chr2_3:517085-517104 | Msa0269590:intron | 45.0% | |
| !! | TACCAAATGGGAGGTGTTGT+CGG | - | chr2_3:517094-517113 | Msa0269590:intron | 45.0% |
| !! | TAAAAGAGCACTTGCCTGCA+GGG | + | chr2_3:517208-517227 | None:intergenic | 45.0% |
| !! | TTAAAAGAGCACTTGCCTGC+AGG | + | chr2_3:517209-517228 | None:intergenic | 45.0% |
| TCTAGAGAGATCGAAGATGG+AGG | - | chr2_3:517341-517360 | Msa0269590:intron | 45.0% | |
| GCTTTAACCATTCGTGTTGC+TGG | - | chr2_3:517465-517484 | Msa0269590:intron | 45.0% | |
| AACAACTCCAGCAACACGAA+TGG | + | chr2_3:517475-517494 | None:intergenic | 45.0% | |
| ! | TCGTGTTGCTGGAGTTGTTA+AGG | - | chr2_3:517476-517495 | Msa0269590:intron | 45.0% |
| TGGAGTTGTTAAGGATTGGG+TGG | - | chr2_3:517485-517504 | Msa0269590:intron | 45.0% | |
| TTCCAGGGAACACCTAATAC+TGG | + | chr2_3:517719-517738 | None:intergenic | 45.0% | |
| TACTGAGTGGAGAGTGATGT+GGG | - | chr2_3:517874-517893 | Msa0269590:intron | 45.0% | |
| GGGAGAGATTTATCCCTAAG+TGG | - | chr2_3:518030-518049 | Msa0269590:intron | 45.0% | |
| ATGAGCAGTTTCAGTAGCGA+TGG | - | chr2_3:518355-518374 | Msa0269590:intron | 45.0% | |
| ATATGCTGCTACACCTGCAA+TGG | + | chr2_3:518409-518428 | None:intergenic | 45.0% | |
| !! | TCAGAAGCATTTGAGGAGTC+AGG | + | chr2_3:518462-518481 | None:intergenic | 45.0% |
| TGTTGAATCTACCCAAAGGC+AGG | - | chr2_3:518485-518504 | Msa0269590:intron | 45.0% | |
| GCTTAGCACCTGTGTTTGAA+AGG | + | chr2_3:518846-518865 | None:intergenic | 45.0% | |
| CTCTACATTGCTCTCTCCAG+CGG | - | chr2_3:514463-514482 | Msa0269590:intron | 50.0% | |
| GTTTGTGTGTGTGTGGATGG+TGG | - | chr2_3:514888-514907 | Msa0269590:CDS | 50.0% | |
| !! | TGTGGATGGTGGAATGCTTG+TGG | - | chr2_3:514899-514918 | Msa0269590:CDS | 50.0% |
| ! | TCCTTACTTTCGCTGGCTGT+TGG | - | chr2_3:515838-515857 | Msa0269590:CDS | 50.0% |
| ACCAACAGCCAGCGAAAGTA+AGG | + | chr2_3:515842-515861 | None:intergenic | 50.0% | |
| AGATCGAAGATGGAGGACCA+CGG | - | chr2_3:517348-517367 | Msa0269590:intron | 50.0% | |
| GTCCAGTATTAGGTGTTCCC+TGG | - | chr2_3:517714-517733 | Msa0269590:CDS | 50.0% | |
| AACAAGCACACAGGCTTCCA+GGG | + | chr2_3:517734-517753 | None:intergenic | 50.0% | |
| TAACAAGCACACAGGCTTCC+AGG | + | chr2_3:517735-517754 | None:intergenic | 50.0% | |
| !! | ATAAGGGTGTGGGTACTGAG+TGG | - | chr2_3:517861-517880 | Msa0269590:intron | 50.0% |
| GTACTGAGTGGAGAGTGATG+TGG | - | chr2_3:517873-517892 | Msa0269590:intron | 50.0% | |
| ! | CAACTAGTCTGAGTTGCGCT+GGG | + | chr2_3:518060-518079 | None:intergenic | 50.0% |
| ! | CAGCGCAACTCAGACTAGTT+GGG | - | chr2_3:518059-518078 | Msa0269590:intron | 50.0% |
| GGAGTTTGGAGACAAGCTTG+TGG | - | chr2_3:518166-518185 | Msa0269590:intron | 50.0% | |
| AGGCTGAGATTCCTGCCTTT+GGG | + | chr2_3:518499-518518 | None:intergenic | 50.0% | |
| AAGGCTGAGATTCCTGCCTT+TGG | + | chr2_3:518500-518519 | None:intergenic | 50.0% | |
| CAAACACAGGTGCTAAGCCA+TGG | - | chr2_3:518848-518867 | Msa0269590:CDS | 50.0% | |
| TTATGATTGGGCCTTTGGGC+TGG | - | chr2_3:519000-519019 | Msa0269590:five_prime_UTR | 50.0% | |
| TTTGTGCTTGGAGTAGCCGC+AGG | - | chr2_3:516965-516984 | Msa0269590:intron | 55.0% | |
| CACCGACAACACCTCCCATT+TGG | + | chr2_3:517099-517118 | None:intergenic | 55.0% | |
| AGATGGAGGACCACGGAACA+TGG | - | chr2_3:517355-517374 | Msa0269590:intron | 55.0% | |
| GTGGGAAGTTCCATGTTCCG+TGG | + | chr2_3:517368-517387 | None:intergenic | 55.0% | |
| ACTGGACTATCCAACGTCCC+TGG | + | chr2_3:517701-517720 | None:intergenic | 55.0% | |
| TGGAGAGTGATGTGGGCATG+TGG | - | chr2_3:517881-517900 | Msa0269590:intron | 55.0% | |
| TGCGCTGGGTAACCCACTTA+GGG | + | chr2_3:518046-518065 | None:intergenic | 55.0% | |
| TTGCGCTGGGTAACCCACTT+AGG | + | chr2_3:518047-518066 | None:intergenic | 55.0% | |
| ! | CCAACTAGTCTGAGTTGCGC+TGG | + | chr2_3:518061-518080 | None:intergenic | 55.0% |
| CCAGCGCAACTCAGACTAGT+TGG | - | chr2_3:518058-518077 | Msa0269590:intron | 55.0% | |
| AAAACCTGGCACCAGCCCAA+AGG | + | chr2_3:519014-519033 | None:intergenic | 55.0% | |
| GCTCATCACCTCGAGTCCTG+CGG | + | chr2_3:516984-517003 | None:intergenic | 60.0% | |
| TGGAGTAGCCGCAGGACTCG+AGG | - | chr2_3:516973-516992 | Msa0269590:intron | 65.0% | |
| !! | TGGGCCTTTGGGCTGGTGCC+AGG | - | chr2_3:519007-519026 | Msa0269590:five_prime_UTR | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 514216 | 519108 | 514216 | ID=Msa0269590;Name=Msa0269590 |
| chr2_3 | mRNA | 514216 | 519108 | 514216 | ID=Msa0269590-mRNA-1;Parent=Msa0269590;Name=Msa0269590-mRNA-1;_AED=0.27;_eAED=0.27;_QI=199|0.62|0.55|1|0.62|0.55|9|0|276 |
| chr2_3 | exon | 514216 | 514219 | 514216 | ID=Msa0269590-mRNA-1:exon:265;Parent=Msa0269590-mRNA-1 |
| chr2_3 | exon | 514538 | 514545 | 514538 | ID=Msa0269590-mRNA-1:exon:264;Parent=Msa0269590-mRNA-1 |
| chr2_3 | exon | 514803 | 514918 | 514803 | ID=Msa0269590-mRNA-1:exon:263;Parent=Msa0269590-mRNA-1 |
| chr2_3 | exon | 515745 | 515885 | 515745 | ID=Msa0269590-mRNA-1:exon:262;Parent=Msa0269590-mRNA-1 |
| chr2_3 | exon | 516161 | 516373 | 516161 | ID=Msa0269590-mRNA-1:exon:261;Parent=Msa0269590-mRNA-1 |
| chr2_3 | exon | 516636 | 516748 | 516636 | ID=Msa0269590-mRNA-1:exon:260;Parent=Msa0269590-mRNA-1 |
| chr2_3 | exon | 517558 | 517592 | 517558 | ID=Msa0269590-mRNA-1:exon:259;Parent=Msa0269590-mRNA-1 |
| chr2_3 | exon | 517673 | 517780 | 517673 | ID=Msa0269590-mRNA-1:exon:258;Parent=Msa0269590-mRNA-1 |
| chr2_3 | exon | 518820 | 519108 | 518820 | ID=Msa0269590-mRNA-1:exon:257;Parent=Msa0269590-mRNA-1 |
| chr2_3 | five_prime_UTR | 518910 | 519108 | 518910 | ID=Msa0269590-mRNA-1:five_prime_utr;Parent=Msa0269590-mRNA-1 |
| chr2_3 | CDS | 518820 | 518909 | 518820 | ID=Msa0269590-mRNA-1:cds;Parent=Msa0269590-mRNA-1 |
| chr2_3 | CDS | 517673 | 517780 | 517673 | ID=Msa0269590-mRNA-1:cds;Parent=Msa0269590-mRNA-1 |
| chr2_3 | CDS | 517558 | 517592 | 517558 | ID=Msa0269590-mRNA-1:cds;Parent=Msa0269590-mRNA-1 |
| chr2_3 | CDS | 516636 | 516748 | 516636 | ID=Msa0269590-mRNA-1:cds;Parent=Msa0269590-mRNA-1 |
| chr2_3 | CDS | 516161 | 516373 | 516161 | ID=Msa0269590-mRNA-1:cds;Parent=Msa0269590-mRNA-1 |
| chr2_3 | CDS | 515745 | 515885 | 515745 | ID=Msa0269590-mRNA-1:cds;Parent=Msa0269590-mRNA-1 |
| chr2_3 | CDS | 514803 | 514918 | 514803 | ID=Msa0269590-mRNA-1:cds;Parent=Msa0269590-mRNA-1 |
| chr2_3 | CDS | 514538 | 514545 | 514538 | ID=Msa0269590-mRNA-1:cds;Parent=Msa0269590-mRNA-1 |
| chr2_3 | CDS | 514216 | 514219 | 514216 | ID=Msa0269590-mRNA-1:cds;Parent=Msa0269590-mRNA-1 |
| Gene Sequence |
| Protein sequence |
