Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0270750 | AES63309.1 | 94.671 | 319 | 13 | 1 | 1 | 319 | 1 | 315 | 0.0 | 584 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0270750 | sp|O22197|RHC1A_ARATH | 32.636 | 239 | 135 | 5 | 24 | 249 | 9 | 234 | 2.83e-31 | 122 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0270750 | G7IJX1 | 94.671 | 319 | 13 | 1 | 1 | 319 | 1 | 315 | 0.0 | 584 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0189170 | Msa0270750 | 0.863110 | 3.145173e-64 | -8.615850e-47 |
| Msa0270750 | Msa0309470 | 0.951407 | 2.180448e-109 | -8.615850e-47 |
| Msa0270750 | Msa0427820 | 0.805448 | 1.328392e-49 | -8.615850e-47 |
| Msa0270750 | Msa0518680 | 0.802643 | 5.090557e-49 | -8.615850e-47 |
| Msa0270750 | Msa1452770 | 0.870519 | 1.372868e-66 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0270750 | MtrunA17_Chr2g0278071 | 94.304 | 316 | 14 | 1 | 1 | 316 | 58 | 369 | 0.0 | 577 |
| Msa0270750 | MtrunA17_Chr3g0114781 | 33.977 | 259 | 136 | 6 | 18 | 249 | 15 | 265 | 8.95e-42 | 147 |
| Msa0270750 | MtrunA17_Chr1g0171791 | 40.972 | 144 | 78 | 2 | 144 | 281 | 99 | 241 | 1.03e-32 | 121 |
| Msa0270750 | MtrunA17_Chr3g0093621 | 32.780 | 241 | 134 | 8 | 23 | 249 | 8 | 234 | 1.24e-30 | 117 |
| Msa0270750 | MtrunA17_Chr5g0441191 | 53.933 | 89 | 40 | 1 | 161 | 249 | 157 | 244 | 3.68e-29 | 114 |
| Msa0270750 | MtrunA17_Chr4g0031931 | 54.545 | 88 | 40 | 0 | 162 | 249 | 138 | 225 | 1.89e-28 | 112 |
| Msa0270750 | MtrunA17_Chr2g0328531 | 29.437 | 231 | 148 | 5 | 23 | 249 | 14 | 233 | 2.16e-27 | 109 |
| Msa0270750 | MtrunA17_Chr1g0211891 | 57.895 | 76 | 31 | 1 | 175 | 249 | 163 | 238 | 2.20e-25 | 103 |
| Msa0270750 | MtrunA17_Chr6g0481701 | 50.000 | 92 | 44 | 2 | 160 | 249 | 188 | 279 | 6.65e-25 | 103 |
| Msa0270750 | MtrunA17_Chr3g0112071 | 53.521 | 71 | 33 | 0 | 179 | 249 | 170 | 240 | 4.89e-24 | 101 |
| Msa0270750 | MtrunA17_Chr5g0435561 | 52.857 | 70 | 33 | 0 | 180 | 249 | 168 | 237 | 2.68e-23 | 99.0 |
| Msa0270750 | MtrunA17_Chr3g0121201 | 46.739 | 92 | 43 | 2 | 160 | 250 | 196 | 282 | 4.12e-21 | 92.4 |
| Msa0270750 | MtrunA17_Chr7g0245341 | 43.158 | 95 | 52 | 2 | 157 | 249 | 295 | 389 | 2.27e-19 | 88.6 |
| Msa0270750 | MtrunA17_Chr1g0212081 | 50.000 | 78 | 37 | 1 | 172 | 249 | 233 | 308 | 2.50e-18 | 84.3 |
| Msa0270750 | MtrunA17_Chr4g0061811 | 54.167 | 72 | 32 | 1 | 179 | 249 | 333 | 404 | 6.95e-18 | 83.6 |
| Msa0270750 | MtrunA17_Chr5g0417501 | 37.363 | 91 | 53 | 2 | 159 | 249 | 73 | 159 | 9.12e-18 | 80.9 |
| Msa0270750 | MtrunA17_Chr1g0150571 | 42.169 | 83 | 44 | 2 | 176 | 255 | 201 | 282 | 1.98e-17 | 81.3 |
| Msa0270750 | MtrunA17_Chr6g0456041 | 49.333 | 75 | 37 | 1 | 176 | 249 | 244 | 318 | 1.53e-16 | 79.3 |
| Msa0270750 | MtrunA17_Chr6g0461611 | 34.862 | 109 | 52 | 4 | 155 | 249 | 177 | 280 | 1.89e-13 | 70.1 |
| Msa0270750 | MtrunA17_Chr3g0124731 | 44.286 | 70 | 37 | 1 | 180 | 249 | 166 | 233 | 3.81e-13 | 68.2 |
| Msa0270750 | MtrunA17_Chr1g0181921 | 46.377 | 69 | 33 | 1 | 181 | 249 | 189 | 253 | 6.83e-13 | 67.8 |
| Msa0270750 | MtrunA17_Chr4g0027761 | 38.710 | 93 | 47 | 4 | 184 | 269 | 104 | 193 | 9.43e-13 | 66.2 |
| Msa0270750 | MtrunA17_Chr5g0424081 | 48.333 | 60 | 30 | 1 | 191 | 249 | 209 | 268 | 4.50e-12 | 65.9 |
| Msa0270750 | MtrunA17_Chr2g0308971 | 52.381 | 42 | 20 | 0 | 205 | 246 | 109 | 150 | 6.50e-12 | 64.3 |
| Msa0270750 | MtrunA17_Chr6g0486651 | 41.026 | 78 | 42 | 4 | 175 | 249 | 88 | 164 | 3.99e-11 | 63.5 |
| Msa0270750 | MtrunA17_Chr3g0089261 | 42.857 | 70 | 32 | 2 | 180 | 249 | 279 | 340 | 6.98e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0270750 | AT1G68180.1 | 32.258 | 310 | 127 | 10 | 1 | 307 | 1 | 230 | 1.77e-41 | 144 |
| Msa0270750 | AT1G60360.1 | 33.205 | 259 | 147 | 7 | 17 | 253 | 18 | 272 | 8.91e-34 | 126 |
| Msa0270750 | AT2G40830.1 | 32.636 | 239 | 135 | 5 | 24 | 249 | 9 | 234 | 2.87e-32 | 122 |
| Msa0270750 | AT2G40830.3 | 32.636 | 239 | 135 | 5 | 24 | 249 | 9 | 234 | 2.87e-32 | 122 |
| Msa0270750 | AT2G40830.4 | 32.636 | 239 | 135 | 5 | 24 | 249 | 9 | 234 | 2.87e-32 | 122 |
| Msa0270750 | AT2G40830.2 | 32.636 | 239 | 135 | 5 | 24 | 249 | 9 | 234 | 2.87e-32 | 122 |
| Msa0270750 | AT3G56580.3 | 32.051 | 234 | 139 | 5 | 24 | 249 | 9 | 230 | 4.25e-32 | 122 |
| Msa0270750 | AT3G56580.1 | 32.051 | 234 | 139 | 5 | 24 | 249 | 9 | 230 | 4.25e-32 | 122 |
| Msa0270750 | AT3G56580.2 | 32.051 | 234 | 139 | 5 | 24 | 249 | 9 | 230 | 4.25e-32 | 122 |
| Msa0270750 | AT3G10815.1 | 52.174 | 92 | 44 | 0 | 158 | 249 | 74 | 165 | 7.14e-29 | 110 |
| Msa0270750 | AT3G19950.2 | 31.746 | 252 | 135 | 9 | 23 | 249 | 79 | 318 | 5.15e-27 | 109 |
| Msa0270750 | AT3G19950.3 | 31.746 | 252 | 135 | 9 | 23 | 249 | 79 | 318 | 5.15e-27 | 109 |
| Msa0270750 | AT3G19950.1 | 31.746 | 252 | 135 | 9 | 23 | 249 | 21 | 260 | 5.17e-27 | 108 |
| Msa0270750 | AT5G59550.1 | 50.538 | 93 | 42 | 1 | 175 | 267 | 169 | 257 | 9.82e-27 | 109 |
| Msa0270750 | AT5G59550.2 | 50.538 | 93 | 42 | 1 | 175 | 267 | 274 | 362 | 1.57e-26 | 109 |
| Msa0270750 | AT3G46620.1 | 46.602 | 103 | 44 | 2 | 148 | 249 | 167 | 259 | 1.29e-25 | 105 |
| Msa0270750 | AT3G13430.4 | 51.948 | 77 | 33 | 1 | 173 | 249 | 197 | 269 | 2.86e-23 | 98.2 |
| Msa0270750 | AT3G13430.3 | 51.948 | 77 | 33 | 1 | 173 | 249 | 197 | 269 | 2.86e-23 | 98.2 |
| Msa0270750 | AT3G13430.1 | 51.948 | 77 | 33 | 1 | 173 | 249 | 197 | 269 | 2.86e-23 | 98.2 |
| Msa0270750 | AT3G13430.2 | 51.948 | 77 | 33 | 1 | 173 | 249 | 197 | 269 | 2.86e-23 | 98.2 |
| Msa0270750 | AT2G39720.1 | 55.844 | 77 | 32 | 1 | 179 | 253 | 173 | 249 | 1.69e-22 | 97.4 |
| Msa0270750 | AT2G39720.2 | 55.844 | 77 | 32 | 1 | 179 | 253 | 173 | 249 | 1.69e-22 | 97.4 |
| Msa0270750 | AT5G15820.1 | 55.405 | 74 | 32 | 1 | 177 | 249 | 262 | 335 | 2.32e-21 | 93.2 |
| Msa0270750 | AT3G02340.1 | 50.562 | 89 | 40 | 3 | 162 | 249 | 294 | 379 | 1.68e-20 | 91.7 |
| Msa0270750 | AT3G02340.2 | 50.562 | 89 | 40 | 3 | 162 | 249 | 294 | 379 | 1.68e-20 | 91.7 |
| Msa0270750 | AT1G55530.3 | 27.459 | 244 | 142 | 8 | 23 | 249 | 9 | 234 | 2.10e-20 | 90.1 |
| Msa0270750 | AT1G55530.1 | 48.000 | 75 | 34 | 1 | 175 | 249 | 198 | 267 | 6.08e-20 | 89.4 |
| Msa0270750 | AT1G55530.2 | 48.000 | 75 | 34 | 1 | 175 | 249 | 198 | 267 | 6.08e-20 | 89.4 |
| Msa0270750 | AT5G56340.1 | 46.154 | 91 | 43 | 2 | 160 | 249 | 218 | 303 | 6.51e-20 | 89.7 |
| Msa0270750 | AT5G01980.1 | 39.623 | 106 | 60 | 2 | 145 | 249 | 292 | 394 | 6.09e-19 | 87.4 |
| Msa0270750 | AT4G26400.2 | 43.333 | 90 | 45 | 2 | 161 | 249 | 201 | 285 | 7.94e-19 | 86.3 |
| Msa0270750 | AT4G26400.1 | 43.333 | 90 | 45 | 2 | 161 | 249 | 201 | 285 | 7.94e-19 | 86.3 |
| Msa0270750 | AT5G20910.1 | 40.217 | 92 | 52 | 1 | 161 | 249 | 183 | 274 | 2.20e-17 | 81.6 |
| Msa0270750 | AT5G60820.1 | 42.268 | 97 | 50 | 2 | 157 | 249 | 322 | 416 | 7.50e-17 | 81.3 |
| Msa0270750 | AT1G26800.1 | 42.466 | 73 | 38 | 1 | 177 | 249 | 89 | 157 | 8.52e-17 | 78.2 |
| Msa0270750 | AT1G14200.1 | 37.624 | 101 | 58 | 2 | 150 | 249 | 57 | 153 | 4.85e-16 | 75.5 |
| Msa0270750 | AT5G08139.1 | 48.000 | 75 | 36 | 2 | 177 | 249 | 280 | 353 | 6.01e-16 | 78.2 |
| Msa0270750 | AT5G64920.1 | 45.333 | 75 | 41 | 0 | 179 | 253 | 231 | 305 | 1.98e-15 | 76.3 |
| Msa0270750 | AT3G60080.1 | 44.444 | 72 | 32 | 2 | 186 | 249 | 142 | 213 | 8.41e-15 | 74.3 |
| Msa0270750 | AT2G44330.1 | 45.714 | 70 | 32 | 1 | 186 | 249 | 71 | 140 | 1.71e-13 | 68.2 |
| Msa0270750 | AT3G30460.1 | 36.957 | 92 | 53 | 2 | 161 | 250 | 54 | 142 | 5.93e-13 | 65.9 |
| Msa0270750 | AT3G30460.2 | 36.957 | 92 | 53 | 2 | 161 | 250 | 90 | 178 | 8.74e-13 | 66.2 |
| Msa0270750 | AT5G02750.1 | 52.000 | 50 | 24 | 0 | 200 | 249 | 209 | 258 | 2.28e-11 | 63.9 |
| Msa0270750 | AT2G03000.1 | 41.892 | 74 | 36 | 3 | 180 | 252 | 461 | 528 | 4.87e-11 | 63.9 |
| Msa0270750 | AT2G01735.1 | 37.037 | 81 | 49 | 2 | 177 | 256 | 280 | 359 | 7.62e-11 | 62.8 |
Find 91 sgRNAs with CRISPR-Local
Find 200 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTGCTGATCATTCTCATTT+TGG | 0.076885 | 2_3:-1999098 | None:intergenic |
| TGAGAACCTTCCACTATTTC+TGG | 0.165081 | 2_3:+1998362 | Msa0270750:CDS |
| TCTTTGCATATAGGACAATT+TGG | 0.213259 | 2_3:-1998919 | None:intergenic |
| AATTTACAAGCAGCATTAAT+TGG | 0.221425 | 2_3:+1999139 | Msa0270750:CDS |
| GGGTCCATGTTTCTGTTGTT+AGG | 0.244692 | 2_3:-1998520 | None:intergenic |
| CAAGCAGCATTAATTGGATT+TGG | 0.248709 | 2_3:+1999145 | Msa0270750:CDS |
| AAACAACACAACACCACAAT+GGG | 0.266552 | 2_3:+1998615 | Msa0270750:CDS |
| TCCTTCTACTAACCAGTTAA+TGG | 0.270630 | 2_3:+1998546 | Msa0270750:CDS |
| ACAAATACCATTCAAAATTA+TGG | 0.274205 | 2_3:+1998421 | Msa0270750:CDS |
| GAATGATCAGCAGGGTTTCT+TGG | 0.309653 | 2_3:+1999107 | Msa0270750:CDS |
| AATGATCAGCAGGGTTTCTT+GGG | 0.310221 | 2_3:+1999108 | Msa0270750:CDS |
| CGCAGTTGATGGAAGCAATA+TGG | 0.332701 | 2_3:-1998454 | None:intergenic |
| TGAAGCCTTGCCAATGGTTA+AGG | 0.364501 | 2_3:+1998870 | Msa0270750:CDS |
| ACGAGCGTGGAGCTCAAAAT+AGG | 0.367783 | 2_3:-1999220 | None:intergenic |
| TCATTAGATGAGTTCTTTGA+TGG | 0.373604 | 2_3:+1998793 | Msa0270750:CDS |
| CAAGTTCATAACGCAGTTGA+TGG | 0.375121 | 2_3:-1998465 | None:intergenic |
| CTGTAGCTCGTGACGGCATA+CGG | 0.378221 | 2_3:-1999040 | None:intergenic |
| ATTGTGGTGTTGTGTTGTTT+TGG | 0.388494 | 2_3:-1998612 | None:intergenic |
| AGAAGTAAGATCAAACTCTA+AGG | 0.394477 | 2_3:+1999252 | Msa0270750:CDS |
| GGTCCATGTTTCTGTTGTTA+GGG | 0.400373 | 2_3:-1998519 | None:intergenic |
| AATAGGACCGCGTCCAATCT+AGG | 0.407821 | 2_3:-1999203 | None:intergenic |
| CGTATGCCGTCACGAGCTAC+AGG | 0.415344 | 2_3:+1999041 | Msa0270750:CDS |
| CCAAAATGAGAATGATCAGC+AGG | 0.417579 | 2_3:+1999098 | Msa0270750:CDS |
| AAGCTAAGCTACCCATTAAC+TGG | 0.418537 | 2_3:-1998558 | None:intergenic |
| GCAGGGTTTCTTGGGGTTTG+AGG | 0.423615 | 2_3:+1999116 | Msa0270750:CDS |
| CCCATTAACTGGTTAGTAGA+AGG | 0.433887 | 2_3:-1998547 | None:intergenic |
| TGGTCTTGTCTTCTAAGAGA+TGG | 0.437407 | 2_3:-1998592 | None:intergenic |
| CAATCTAGGACTGCTCGAAT+AGG | 0.437852 | 2_3:-1999189 | None:intergenic |
| GGTGGTGGTGCAATAGGCCT+TGG | 0.439267 | 2_3:-1998715 | None:intergenic |
| ATTCTGACTGCATTCTCCCT+TGG | 0.441720 | 2_3:+1998995 | Msa0270750:CDS |
| TCAAACTCATCTTTGCATAT+AGG | 0.442911 | 2_3:-1998928 | None:intergenic |
| AACCATTGGCAAGGCTTCAA+TGG | 0.443378 | 2_3:-1998866 | None:intergenic |
| CCTTCTACTAACCAGTTAAT+GGG | 0.452199 | 2_3:+1998547 | Msa0270750:CDS |
| GGAGCCAACTTGCTTCGATT+AGG | 0.457339 | 2_3:+1999166 | Msa0270750:CDS |
| GCCACCTCCAGCATCTCCTT+CGG | 0.478323 | 2_3:+1998843 | Msa0270750:CDS |
| TCAAAGAACTCATCTAATGA+AGG | 0.479520 | 2_3:-1998790 | None:intergenic |
| GGAGATGCTGGAGGTGGCCC+CGG | 0.482622 | 2_3:-1998838 | None:intergenic |
| CATTAGATGAGTTCTTTGAT+GGG | 0.483678 | 2_3:+1998794 | Msa0270750:CDS |
| TATATGCAAAGATGAGTTTG+AGG | 0.486390 | 2_3:+1998930 | Msa0270750:CDS |
| ACCACCACCATCACAAAACT+TGG | 0.486668 | 2_3:+1998741 | Msa0270750:CDS |
| GGTGGTGCAATAGGCCTTGG+TGG | 0.488698 | 2_3:-1998712 | None:intergenic |
| CTATTCGAGCAGTCCTAGAT+TGG | 0.488931 | 2_3:+1999190 | Msa0270750:CDS |
| AAAACAACACAACACCACAA+TGG | 0.496778 | 2_3:+1998614 | Msa0270750:CDS |
| TCAATGGCCGAAGGAGATGC+TGG | 0.500012 | 2_3:-1998850 | None:intergenic |
| TGTAGCTCGTGACGGCATAC+GGG | 0.506136 | 2_3:-1999039 | None:intergenic |
| AATTGAGACACCAGAAATAG+TGG | 0.510710 | 2_3:-1998372 | None:intergenic |
| GCCGAAGGAGATGCTGGAGG+TGG | 0.514613 | 2_3:-1998844 | None:intergenic |
| GGGTCATTCATAAGAAGTCT+TGG | 0.524227 | 2_3:-1998499 | None:intergenic |
| TCCAATAATATGTCTCTGAC+AGG | 0.524599 | 2_3:+1998304 | None:intergenic |
| GCTTCTGTTACCTTAACCAT+TGG | 0.525756 | 2_3:-1998880 | None:intergenic |
| CAAAGAACTCATCTAATGAA+GGG | 0.526024 | 2_3:-1998789 | None:intergenic |
| GTTATGAACTTGATATATCA+AGG | 0.531624 | 2_3:+1998476 | Msa0270750:CDS |
| GTCTTCTAAGAGATGGATCA+AGG | 0.535188 | 2_3:-1998585 | None:intergenic |
| AAGGGAGAATGCAGTCAGAA+TGG | 0.535813 | 2_3:-1998993 | None:intergenic |
| TCATGTTCTGTTCCCCATTG+TGG | 0.540794 | 2_3:-1998628 | None:intergenic |
| AACTGGTTAGTAGAAGGAGG+AGG | 0.540994 | 2_3:-1998541 | None:intergenic |
| GTGTTATGCATTTGAAGCCA+AGG | 0.541607 | 2_3:-1999012 | None:intergenic |
| TTCTACTACGAGCACGAGCG+TGG | 0.546469 | 2_3:-1999233 | None:intergenic |
| AAAATCAAAATCCACAAGCA+TGG | 0.547418 | 2_3:+1998659 | Msa0270750:CDS |
| GATTCACAACAATATTAGAC+CGG | 0.549393 | 2_3:+1998819 | Msa0270750:CDS |
| ATAGGCCTTGGTGGATGAGT+TGG | 0.551028 | 2_3:-1998703 | None:intergenic |
| GGCCATTGAAGCCTTGCCAA+TGG | 0.553512 | 2_3:+1998864 | Msa0270750:CDS |
| CGTCCTCGTGTCATTGTCGA+CGG | 0.567011 | 2_3:+1998328 | Msa0270750:CDS |
| CTTAGTGTAATCCATGCTTG+TGG | 0.570113 | 2_3:-1998670 | None:intergenic |
| CAAAATGAGAATGATCAGCA+GGG | 0.573456 | 2_3:+1999099 | Msa0270750:CDS |
| AGATGAGTTTGAGGTTGATG+TGG | 0.576181 | 2_3:+1998939 | Msa0270750:CDS |
| TGTTACCTTAACCATTGGCA+AGG | 0.594184 | 2_3:-1998875 | None:intergenic |
| TGTTATGCATTTGAAGCCAA+GGG | 0.598250 | 2_3:-1999011 | None:intergenic |
| ATTAGATGAGTTCTTTGATG+GGG | 0.601899 | 2_3:+1998795 | Msa0270750:CDS |
| TAGGCCTAATCGAAGCAAGT+TGG | 0.610681 | 2_3:-1999170 | None:intergenic |
| ATTCACAACAATATTAGACC+GGG | 0.615071 | 2_3:+1998820 | Msa0270750:CDS |
| GAATGGTAGAAATGTTTGCA+TGG | 0.616001 | 2_3:-1998976 | None:intergenic |
| ATGATCAGCAGGGTTTCTTG+GGG | 0.617582 | 2_3:+1999109 | Msa0270750:CDS |
| ATGGTATTCTGACAGTACGT+TGG | 0.622474 | 2_3:-1998396 | None:intergenic |
| AAAGAACTCATCTAATGAAG+GGG | 0.623408 | 2_3:-1998788 | None:intergenic |
| AACAACACAACACCACAATG+GGG | 0.628137 | 2_3:+1998616 | Msa0270750:CDS |
| GGCAAGGCTTCAATGGCCGA+AGG | 0.631031 | 2_3:-1998859 | None:intergenic |
| CAACGCCCTGTAGCTCGTGA+CGG | 0.639056 | 2_3:-1999047 | None:intergenic |
| TGACCCTAACAACAGAAACA+TGG | 0.639124 | 2_3:+1998516 | Msa0270750:CDS |
| ACTGGTTAGTAGAAGGAGGA+GGG | 0.643379 | 2_3:-1998540 | None:intergenic |
| GTTTCAATGTCATTGAGCTG+AGG | 0.643651 | 2_3:-1998766 | None:intergenic |
| GTAGCTCGTGACGGCATACG+GGG | 0.647054 | 2_3:-1999038 | None:intergenic |
| GAGACACCAGAAATAGTGGA+AGG | 0.648767 | 2_3:-1998368 | None:intergenic |
| GTATGCCGTCACGAGCTACA+GGG | 0.649158 | 2_3:+1999042 | Msa0270750:CDS |
| ATTAACTGGTTAGTAGAAGG+AGG | 0.655639 | 2_3:-1998544 | None:intergenic |
| CGTCGACAATGACACGAGGA+CGG | 0.658835 | 2_3:-1998327 | None:intergenic |
| GAGCAGTCCTAGATTGGACG+CGG | 0.690002 | 2_3:+1999196 | Msa0270750:CDS |
| ATGGCCGAAGGAGATGCTGG+AGG | 0.719854 | 2_3:-1998847 | None:intergenic |
| TTCACAACAATATTAGACCG+GGG | 0.752187 | 2_3:+1998821 | Msa0270750:CDS |
| TAAGACCAACTCATCCACCA+AGG | 0.753067 | 2_3:+1998698 | Msa0270750:CDS |
| ACACCGTCGACAATGACACG+AGG | 0.757808 | 2_3:-1998331 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAAATACCATTCAAAATTA+TGG | + | chr2_3:1998421-1998440 | Msa0270750:CDS | 20.0% |
| !! | ACAAATACCATTCAAAATTA+TGG | + | chr2_3:1998421-1998440 | Msa0270750:CDS | 20.0% |
| !!! | TTTTGAATGGTATTTGTTGA+TGG | - | chr2_3:1998418-1998437 | None:intergenic | 25.0% |
| ! | GTTATGAACTTGATATATCA+AGG | + | chr2_3:1998476-1998495 | Msa0270750:CDS | 25.0% |
| ! | AATTTACAAGCAGCATTAAT+TGG | + | chr2_3:1999139-1999158 | Msa0270750:CDS | 25.0% |
| !!! | TTTTGAATGGTATTTGTTGA+TGG | - | chr2_3:1998418-1998437 | None:intergenic | 25.0% |
| ! | GTTATGAACTTGATATATCA+AGG | + | chr2_3:1998476-1998495 | Msa0270750:CDS | 25.0% |
| ! | AATTTACAAGCAGCATTAAT+TGG | + | chr2_3:1999139-1999158 | Msa0270750:CDS | 25.0% |
| ! | GAAAGAGCCATAATTTTGAA+TGG | - | chr2_3:1998431-1998450 | None:intergenic | 30.0% |
| AAAATCAAAATCCACAAGCA+TGG | + | chr2_3:1998659-1998678 | Msa0270750:CDS | 30.0% | |
| AAAGAACTCATCTAATGAAG+GGG | - | chr2_3:1998791-1998810 | None:intergenic | 30.0% | |
| CAAAGAACTCATCTAATGAA+GGG | - | chr2_3:1998792-1998811 | None:intergenic | 30.0% | |
| TCAAAGAACTCATCTAATGA+AGG | - | chr2_3:1998793-1998812 | None:intergenic | 30.0% | |
| TCATTAGATGAGTTCTTTGA+TGG | + | chr2_3:1998793-1998812 | Msa0270750:CDS | 30.0% | |
| CATTAGATGAGTTCTTTGAT+GGG | + | chr2_3:1998794-1998813 | Msa0270750:CDS | 30.0% | |
| ATTAGATGAGTTCTTTGATG+GGG | + | chr2_3:1998795-1998814 | Msa0270750:CDS | 30.0% | |
| GATTCACAACAATATTAGAC+CGG | + | chr2_3:1998819-1998838 | Msa0270750:CDS | 30.0% | |
| ATTCACAACAATATTAGACC+GGG | + | chr2_3:1998820-1998839 | Msa0270750:CDS | 30.0% | |
| TCTTTGCATATAGGACAATT+TGG | - | chr2_3:1998922-1998941 | None:intergenic | 30.0% | |
| TCAAACTCATCTTTGCATAT+AGG | - | chr2_3:1998931-1998950 | None:intergenic | 30.0% | |
| TATATGCAAAGATGAGTTTG+AGG | + | chr2_3:1998930-1998949 | Msa0270750:CDS | 30.0% | |
| !! | TCTCATTTTGGAAAAAGTAG+TGG | - | chr2_3:1999089-1999108 | None:intergenic | 30.0% |
| ! | GAAAGAGCCATAATTTTGAA+TGG | - | chr2_3:1998431-1998450 | None:intergenic | 30.0% |
| AAAATCAAAATCCACAAGCA+TGG | + | chr2_3:1998659-1998678 | Msa0270750:CDS | 30.0% | |
| AAAGAACTCATCTAATGAAG+GGG | - | chr2_3:1998791-1998810 | None:intergenic | 30.0% | |
| CAAAGAACTCATCTAATGAA+GGG | - | chr2_3:1998792-1998811 | None:intergenic | 30.0% | |
| TCAAAGAACTCATCTAATGA+AGG | - | chr2_3:1998793-1998812 | None:intergenic | 30.0% | |
| TCATTAGATGAGTTCTTTGA+TGG | + | chr2_3:1998793-1998812 | Msa0270750:CDS | 30.0% | |
| CATTAGATGAGTTCTTTGAT+GGG | + | chr2_3:1998794-1998813 | Msa0270750:CDS | 30.0% | |
| ATTAGATGAGTTCTTTGATG+GGG | + | chr2_3:1998795-1998814 | Msa0270750:CDS | 30.0% | |
| GATTCACAACAATATTAGAC+CGG | + | chr2_3:1998819-1998838 | Msa0270750:CDS | 30.0% | |
| ATTCACAACAATATTAGACC+GGG | + | chr2_3:1998820-1998839 | Msa0270750:CDS | 30.0% | |
| TCTTTGCATATAGGACAATT+TGG | - | chr2_3:1998922-1998941 | None:intergenic | 30.0% | |
| TCAAACTCATCTTTGCATAT+AGG | - | chr2_3:1998931-1998950 | None:intergenic | 30.0% | |
| TATATGCAAAGATGAGTTTG+AGG | + | chr2_3:1998930-1998949 | Msa0270750:CDS | 30.0% | |
| !! | TCTCATTTTGGAAAAAGTAG+TGG | - | chr2_3:1999089-1999108 | None:intergenic | 30.0% |
| AATTGAGACACCAGAAATAG+TGG | - | chr2_3:1998375-1998394 | None:intergenic | 35.0% | |
| ATTAACTGGTTAGTAGAAGG+AGG | - | chr2_3:1998547-1998566 | None:intergenic | 35.0% | |
| TCCTTCTACTAACCAGTTAA+TGG | + | chr2_3:1998546-1998565 | Msa0270750:CDS | 35.0% | |
| CCTTCTACTAACCAGTTAAT+GGG | + | chr2_3:1998547-1998566 | Msa0270750:CDS | 35.0% | |
| !!! | ATTGTGGTGTTGTGTTGTTT+TGG | - | chr2_3:1998615-1998634 | None:intergenic | 35.0% |
| AAAACAACACAACACCACAA+TGG | + | chr2_3:1998614-1998633 | Msa0270750:CDS | 35.0% | |
| AAACAACACAACACCACAAT+GGG | + | chr2_3:1998615-1998634 | Msa0270750:CDS | 35.0% | |
| TTCACAACAATATTAGACCG+GGG | + | chr2_3:1998821-1998840 | Msa0270750:CDS | 35.0% | |
| GAATGGTAGAAATGTTTGCA+TGG | - | chr2_3:1998979-1998998 | None:intergenic | 35.0% | |
| ! | TGTTATGCATTTGAAGCCAA+GGG | - | chr2_3:1999014-1999033 | None:intergenic | 35.0% |
| CAAAATGAGAATGATCAGCA+GGG | + | chr2_3:1999099-1999118 | Msa0270750:CDS | 35.0% | |
| CAAGCAGCATTAATTGGATT+TGG | + | chr2_3:1999145-1999164 | Msa0270750:CDS | 35.0% | |
| AATTGAGACACCAGAAATAG+TGG | - | chr2_3:1998375-1998394 | None:intergenic | 35.0% | |
| ATTAACTGGTTAGTAGAAGG+AGG | - | chr2_3:1998547-1998566 | None:intergenic | 35.0% | |
| TCCTTCTACTAACCAGTTAA+TGG | + | chr2_3:1998546-1998565 | Msa0270750:CDS | 35.0% | |
| CCTTCTACTAACCAGTTAAT+GGG | + | chr2_3:1998547-1998566 | Msa0270750:CDS | 35.0% | |
| !!! | ATTGTGGTGTTGTGTTGTTT+TGG | - | chr2_3:1998615-1998634 | None:intergenic | 35.0% |
| AAAACAACACAACACCACAA+TGG | + | chr2_3:1998614-1998633 | Msa0270750:CDS | 35.0% | |
| AAACAACACAACACCACAAT+GGG | + | chr2_3:1998615-1998634 | Msa0270750:CDS | 35.0% | |
| TTCACAACAATATTAGACCG+GGG | + | chr2_3:1998821-1998840 | Msa0270750:CDS | 35.0% | |
| GAATGGTAGAAATGTTTGCA+TGG | - | chr2_3:1998979-1998998 | None:intergenic | 35.0% | |
| ! | TGTTATGCATTTGAAGCCAA+GGG | - | chr2_3:1999014-1999033 | None:intergenic | 35.0% |
| CAAAATGAGAATGATCAGCA+GGG | + | chr2_3:1999099-1999118 | Msa0270750:CDS | 35.0% | |
| CAAGCAGCATTAATTGGATT+TGG | + | chr2_3:1999145-1999164 | Msa0270750:CDS | 35.0% | |
| TGAGAACCTTCCACTATTTC+TGG | + | chr2_3:1998362-1998381 | Msa0270750:CDS | 40.0% | |
| ATGGTATTCTGACAGTACGT+TGG | - | chr2_3:1998399-1998418 | None:intergenic | 40.0% | |
| CAAGTTCATAACGCAGTTGA+TGG | - | chr2_3:1998468-1998487 | None:intergenic | 40.0% | |
| GGGTCATTCATAAGAAGTCT+TGG | - | chr2_3:1998502-1998521 | None:intergenic | 40.0% | |
| TGACCCTAACAACAGAAACA+TGG | + | chr2_3:1998516-1998535 | Msa0270750:CDS | 40.0% | |
| ! | GGTCCATGTTTCTGTTGTTA+GGG | - | chr2_3:1998522-1998541 | None:intergenic | 40.0% |
| CCCATTAACTGGTTAGTAGA+AGG | - | chr2_3:1998550-1998569 | None:intergenic | 40.0% | |
| AAGCTAAGCTACCCATTAAC+TGG | - | chr2_3:1998561-1998580 | None:intergenic | 40.0% | |
| ! | GTCTTCTAAGAGATGGATCA+AGG | - | chr2_3:1998588-1998607 | None:intergenic | 40.0% |
| !! | TGGTCTTGTCTTCTAAGAGA+TGG | - | chr2_3:1998595-1998614 | None:intergenic | 40.0% |
| AACAACACAACACCACAATG+GGG | + | chr2_3:1998616-1998635 | Msa0270750:CDS | 40.0% | |
| CTTAGTGTAATCCATGCTTG+TGG | - | chr2_3:1998673-1998692 | None:intergenic | 40.0% | |
| GTTTCAATGTCATTGAGCTG+AGG | - | chr2_3:1998769-1998788 | None:intergenic | 40.0% | |
| TGTTACCTTAACCATTGGCA+AGG | - | chr2_3:1998878-1998897 | None:intergenic | 40.0% | |
| GCTTCTGTTACCTTAACCAT+TGG | - | chr2_3:1998883-1998902 | None:intergenic | 40.0% | |
| !! | AGATGAGTTTGAGGTTGATG+TGG | + | chr2_3:1998939-1998958 | Msa0270750:CDS | 40.0% |
| ! | GTGTTATGCATTTGAAGCCA+AGG | - | chr2_3:1999015-1999034 | None:intergenic | 40.0% |
| ! | CCTGCTGATCATTCTCATTT+TGG | - | chr2_3:1999101-1999120 | None:intergenic | 40.0% |
| CCAAAATGAGAATGATCAGC+AGG | + | chr2_3:1999098-1999117 | Msa0270750:CDS | 40.0% | |
| AATGATCAGCAGGGTTTCTT+GGG | + | chr2_3:1999108-1999127 | Msa0270750:CDS | 40.0% | |
| TGAGAACCTTCCACTATTTC+TGG | + | chr2_3:1998362-1998381 | Msa0270750:CDS | 40.0% | |
| ATGGTATTCTGACAGTACGT+TGG | - | chr2_3:1998399-1998418 | None:intergenic | 40.0% | |
| CAAGTTCATAACGCAGTTGA+TGG | - | chr2_3:1998468-1998487 | None:intergenic | 40.0% | |
| GGGTCATTCATAAGAAGTCT+TGG | - | chr2_3:1998502-1998521 | None:intergenic | 40.0% | |
| TGACCCTAACAACAGAAACA+TGG | + | chr2_3:1998516-1998535 | Msa0270750:CDS | 40.0% | |
| ! | GGTCCATGTTTCTGTTGTTA+GGG | - | chr2_3:1998522-1998541 | None:intergenic | 40.0% |
| CCCATTAACTGGTTAGTAGA+AGG | - | chr2_3:1998550-1998569 | None:intergenic | 40.0% | |
| AAGCTAAGCTACCCATTAAC+TGG | - | chr2_3:1998561-1998580 | None:intergenic | 40.0% | |
| ! | GTCTTCTAAGAGATGGATCA+AGG | - | chr2_3:1998588-1998607 | None:intergenic | 40.0% |
| !! | TGGTCTTGTCTTCTAAGAGA+TGG | - | chr2_3:1998595-1998614 | None:intergenic | 40.0% |
| AACAACACAACACCACAATG+GGG | + | chr2_3:1998616-1998635 | Msa0270750:CDS | 40.0% | |
| CTTAGTGTAATCCATGCTTG+TGG | - | chr2_3:1998673-1998692 | None:intergenic | 40.0% | |
| GTTTCAATGTCATTGAGCTG+AGG | - | chr2_3:1998769-1998788 | None:intergenic | 40.0% | |
| TGTTACCTTAACCATTGGCA+AGG | - | chr2_3:1998878-1998897 | None:intergenic | 40.0% | |
| GCTTCTGTTACCTTAACCAT+TGG | - | chr2_3:1998883-1998902 | None:intergenic | 40.0% | |
| !! | AGATGAGTTTGAGGTTGATG+TGG | + | chr2_3:1998939-1998958 | Msa0270750:CDS | 40.0% |
| ! | GTGTTATGCATTTGAAGCCA+AGG | - | chr2_3:1999015-1999034 | None:intergenic | 40.0% |
| ! | CCTGCTGATCATTCTCATTT+TGG | - | chr2_3:1999101-1999120 | None:intergenic | 40.0% |
| CCAAAATGAGAATGATCAGC+AGG | + | chr2_3:1999098-1999117 | Msa0270750:CDS | 40.0% | |
| AATGATCAGCAGGGTTTCTT+GGG | + | chr2_3:1999108-1999127 | Msa0270750:CDS | 40.0% | |
| ! | GAGACACCAGAAATAGTGGA+AGG | - | chr2_3:1998371-1998390 | None:intergenic | 45.0% |
| !! | CGCAGTTGATGGAAGCAATA+TGG | - | chr2_3:1998457-1998476 | None:intergenic | 45.0% |
| ! | GGGTCCATGTTTCTGTTGTT+AGG | - | chr2_3:1998523-1998542 | None:intergenic | 45.0% |
| ACTGGTTAGTAGAAGGAGGA+GGG | - | chr2_3:1998543-1998562 | None:intergenic | 45.0% | |
| AACTGGTTAGTAGAAGGAGG+AGG | - | chr2_3:1998544-1998563 | None:intergenic | 45.0% | |
| TCATGTTCTGTTCCCCATTG+TGG | - | chr2_3:1998631-1998650 | None:intergenic | 45.0% | |
| TAAGACCAACTCATCCACCA+AGG | + | chr2_3:1998698-1998717 | Msa0270750:CDS | 45.0% | |
| !!! | AAGTTTTGTGATGGTGGTGG+TGG | - | chr2_3:1998742-1998761 | None:intergenic | 45.0% |
| ACCACCACCATCACAAAACT+TGG | + | chr2_3:1998741-1998760 | Msa0270750:CDS | 45.0% | |
| !! | TGAGGAGCCAAGTTTTGTGA+TGG | - | chr2_3:1998751-1998770 | None:intergenic | 45.0% |
| AACCATTGGCAAGGCTTCAA+TGG | - | chr2_3:1998869-1998888 | None:intergenic | 45.0% | |
| TGAAGCCTTGCCAATGGTTA+AGG | + | chr2_3:1998870-1998889 | Msa0270750:CDS | 45.0% | |
| AAGGGAGAATGCAGTCAGAA+TGG | - | chr2_3:1998996-1999015 | None:intergenic | 45.0% | |
| ATTCTGACTGCATTCTCCCT+TGG | + | chr2_3:1998995-1999014 | Msa0270750:CDS | 45.0% | |
| GAATGATCAGCAGGGTTTCT+TGG | + | chr2_3:1999107-1999126 | Msa0270750:CDS | 45.0% | |
| ATGATCAGCAGGGTTTCTTG+GGG | + | chr2_3:1999109-1999128 | Msa0270750:CDS | 45.0% | |
| TAGGCCTAATCGAAGCAAGT+TGG | - | chr2_3:1999173-1999192 | None:intergenic | 45.0% | |
| ! | CAATCTAGGACTGCTCGAAT+AGG | - | chr2_3:1999192-1999211 | None:intergenic | 45.0% |
| CTATTCGAGCAGTCCTAGAT+TGG | + | chr2_3:1999190-1999209 | Msa0270750:CDS | 45.0% | |
| ! | GAGACACCAGAAATAGTGGA+AGG | - | chr2_3:1998371-1998390 | None:intergenic | 45.0% |
| !! | CGCAGTTGATGGAAGCAATA+TGG | - | chr2_3:1998457-1998476 | None:intergenic | 45.0% |
| ! | GGGTCCATGTTTCTGTTGTT+AGG | - | chr2_3:1998523-1998542 | None:intergenic | 45.0% |
| ACTGGTTAGTAGAAGGAGGA+GGG | - | chr2_3:1998543-1998562 | None:intergenic | 45.0% | |
| AACTGGTTAGTAGAAGGAGG+AGG | - | chr2_3:1998544-1998563 | None:intergenic | 45.0% | |
| TCATGTTCTGTTCCCCATTG+TGG | - | chr2_3:1998631-1998650 | None:intergenic | 45.0% | |
| TAAGACCAACTCATCCACCA+AGG | + | chr2_3:1998698-1998717 | Msa0270750:CDS | 45.0% | |
| !!! | AAGTTTTGTGATGGTGGTGG+TGG | - | chr2_3:1998742-1998761 | None:intergenic | 45.0% |
| ACCACCACCATCACAAAACT+TGG | + | chr2_3:1998741-1998760 | Msa0270750:CDS | 45.0% | |
| !! | TGAGGAGCCAAGTTTTGTGA+TGG | - | chr2_3:1998751-1998770 | None:intergenic | 45.0% |
| AACCATTGGCAAGGCTTCAA+TGG | - | chr2_3:1998869-1998888 | None:intergenic | 45.0% | |
| TGAAGCCTTGCCAATGGTTA+AGG | + | chr2_3:1998870-1998889 | Msa0270750:CDS | 45.0% | |
| AAGGGAGAATGCAGTCAGAA+TGG | - | chr2_3:1998996-1999015 | None:intergenic | 45.0% | |
| ATTCTGACTGCATTCTCCCT+TGG | + | chr2_3:1998995-1999014 | Msa0270750:CDS | 45.0% | |
| GAATGATCAGCAGGGTTTCT+TGG | + | chr2_3:1999107-1999126 | Msa0270750:CDS | 45.0% | |
| ATGATCAGCAGGGTTTCTTG+GGG | + | chr2_3:1999109-1999128 | Msa0270750:CDS | 45.0% | |
| TAGGCCTAATCGAAGCAAGT+TGG | - | chr2_3:1999173-1999192 | None:intergenic | 45.0% | |
| ! | CAATCTAGGACTGCTCGAAT+AGG | - | chr2_3:1999192-1999211 | None:intergenic | 45.0% |
| CTATTCGAGCAGTCCTAGAT+TGG | + | chr2_3:1999190-1999209 | Msa0270750:CDS | 45.0% | |
| ! | ATAGGCCTTGGTGGATGAGT+TGG | - | chr2_3:1998706-1998725 | None:intergenic | 50.0% |
| !!! | TTTTGTGATGGTGGTGGTGG+TGG | - | chr2_3:1998739-1998758 | None:intergenic | 50.0% |
| !!! | GCCAAGTTTTGTGATGGTGG+TGG | - | chr2_3:1998745-1998764 | None:intergenic | 50.0% |
| !! | GGAGCCAAGTTTTGTGATGG+TGG | - | chr2_3:1998748-1998767 | None:intergenic | 50.0% |
| ! | GGAGCCAACTTGCTTCGATT+AGG | + | chr2_3:1999166-1999185 | Msa0270750:CDS | 50.0% |
| AATAGGACCGCGTCCAATCT+AGG | - | chr2_3:1999206-1999225 | None:intergenic | 50.0% | |
| ACGAGCGTGGAGCTCAAAAT+AGG | - | chr2_3:1999223-1999242 | None:intergenic | 50.0% | |
| ! | ATAGGCCTTGGTGGATGAGT+TGG | - | chr2_3:1998706-1998725 | None:intergenic | 50.0% |
| !!! | TTTTGTGATGGTGGTGGTGG+TGG | - | chr2_3:1998739-1998758 | None:intergenic | 50.0% |
| !!! | GCCAAGTTTTGTGATGGTGG+TGG | - | chr2_3:1998745-1998764 | None:intergenic | 50.0% |
| !! | GGAGCCAAGTTTTGTGATGG+TGG | - | chr2_3:1998748-1998767 | None:intergenic | 50.0% |
| ! | GGAGCCAACTTGCTTCGATT+AGG | + | chr2_3:1999166-1999185 | Msa0270750:CDS | 50.0% |
| AATAGGACCGCGTCCAATCT+AGG | - | chr2_3:1999206-1999225 | None:intergenic | 50.0% | |
| ACGAGCGTGGAGCTCAAAAT+AGG | - | chr2_3:1999223-1999242 | None:intergenic | 50.0% | |
| CGTCGACAATGACACGAGGA+CGG | - | chr2_3:1998330-1998349 | None:intergenic | 55.0% | |
| ! | CGTCCTCGTGTCATTGTCGA+CGG | + | chr2_3:1998328-1998347 | Msa0270750:CDS | 55.0% |
| ACACCGTCGACAATGACACG+AGG | - | chr2_3:1998334-1998353 | None:intergenic | 55.0% | |
| TCAATGGCCGAAGGAGATGC+TGG | - | chr2_3:1998853-1998872 | None:intergenic | 55.0% | |
| GGCCATTGAAGCCTTGCCAA+TGG | + | chr2_3:1998864-1998883 | Msa0270750:CDS | 55.0% | |
| TGTAGCTCGTGACGGCATAC+GGG | - | chr2_3:1999042-1999061 | None:intergenic | 55.0% | |
| CTGTAGCTCGTGACGGCATA+CGG | - | chr2_3:1999043-1999062 | None:intergenic | 55.0% | |
| GTATGCCGTCACGAGCTACA+GGG | + | chr2_3:1999042-1999061 | Msa0270750:CDS | 55.0% | |
| GCAGGGTTTCTTGGGGTTTG+AGG | + | chr2_3:1999116-1999135 | Msa0270750:CDS | 55.0% | |
| GAGCAGTCCTAGATTGGACG+CGG | + | chr2_3:1999196-1999215 | Msa0270750:CDS | 55.0% | |
| TTCTACTACGAGCACGAGCG+TGG | - | chr2_3:1999236-1999255 | None:intergenic | 55.0% | |
| CGTCGACAATGACACGAGGA+CGG | - | chr2_3:1998330-1998349 | None:intergenic | 55.0% | |
| ! | CGTCCTCGTGTCATTGTCGA+CGG | + | chr2_3:1998328-1998347 | Msa0270750:CDS | 55.0% |
| ACACCGTCGACAATGACACG+AGG | - | chr2_3:1998334-1998353 | None:intergenic | 55.0% | |
| TCAATGGCCGAAGGAGATGC+TGG | - | chr2_3:1998853-1998872 | None:intergenic | 55.0% | |
| GGCCATTGAAGCCTTGCCAA+TGG | + | chr2_3:1998864-1998883 | Msa0270750:CDS | 55.0% | |
| TGTAGCTCGTGACGGCATAC+GGG | - | chr2_3:1999042-1999061 | None:intergenic | 55.0% | |
| CTGTAGCTCGTGACGGCATA+CGG | - | chr2_3:1999043-1999062 | None:intergenic | 55.0% | |
| GTATGCCGTCACGAGCTACA+GGG | + | chr2_3:1999042-1999061 | Msa0270750:CDS | 55.0% | |
| GCAGGGTTTCTTGGGGTTTG+AGG | + | chr2_3:1999116-1999135 | Msa0270750:CDS | 55.0% | |
| GAGCAGTCCTAGATTGGACG+CGG | + | chr2_3:1999196-1999215 | Msa0270750:CDS | 55.0% | |
| TTCTACTACGAGCACGAGCG+TGG | - | chr2_3:1999236-1999255 | None:intergenic | 55.0% | |
| GGTGGTGCAATAGGCCTTGG+TGG | - | chr2_3:1998715-1998734 | None:intergenic | 60.0% | |
| ! | GGTGGTGGTGCAATAGGCCT+TGG | - | chr2_3:1998718-1998737 | None:intergenic | 60.0% |
| !! | GGTGGTGGTGGTGGTGCAAT+AGG | - | chr2_3:1998724-1998743 | None:intergenic | 60.0% |
| !! | TGTGATGGTGGTGGTGGTGG+TGG | - | chr2_3:1998736-1998755 | None:intergenic | 60.0% |
| GCCACCTCCAGCATCTCCTT+CGG | + | chr2_3:1998843-1998862 | Msa0270750:CDS | 60.0% | |
| ATGGCCGAAGGAGATGCTGG+AGG | - | chr2_3:1998850-1998869 | None:intergenic | 60.0% | |
| GGCAAGGCTTCAATGGCCGA+AGG | - | chr2_3:1998862-1998881 | None:intergenic | 60.0% | |
| GTAGCTCGTGACGGCATACG+GGG | - | chr2_3:1999041-1999060 | None:intergenic | 60.0% | |
| CGTATGCCGTCACGAGCTAC+AGG | + | chr2_3:1999041-1999060 | Msa0270750:CDS | 60.0% | |
| CAACGCCCTGTAGCTCGTGA+CGG | - | chr2_3:1999050-1999069 | None:intergenic | 60.0% | |
| GGTGGTGCAATAGGCCTTGG+TGG | - | chr2_3:1998715-1998734 | None:intergenic | 60.0% | |
| ! | GGTGGTGGTGCAATAGGCCT+TGG | - | chr2_3:1998718-1998737 | None:intergenic | 60.0% |
| !! | GGTGGTGGTGGTGGTGCAAT+AGG | - | chr2_3:1998724-1998743 | None:intergenic | 60.0% |
| !! | TGTGATGGTGGTGGTGGTGG+TGG | - | chr2_3:1998736-1998755 | None:intergenic | 60.0% |
| GCCACCTCCAGCATCTCCTT+CGG | + | chr2_3:1998843-1998862 | Msa0270750:CDS | 60.0% | |
| ATGGCCGAAGGAGATGCTGG+AGG | - | chr2_3:1998850-1998869 | None:intergenic | 60.0% | |
| GGCAAGGCTTCAATGGCCGA+AGG | - | chr2_3:1998862-1998881 | None:intergenic | 60.0% | |
| GTAGCTCGTGACGGCATACG+GGG | - | chr2_3:1999041-1999060 | None:intergenic | 60.0% | |
| CGTATGCCGTCACGAGCTAC+AGG | + | chr2_3:1999041-1999060 | Msa0270750:CDS | 60.0% | |
| CAACGCCCTGTAGCTCGTGA+CGG | - | chr2_3:1999050-1999069 | None:intergenic | 60.0% | |
| !! | GATGGTGGTGGTGGTGGTGG+TGG | - | chr2_3:1998733-1998752 | None:intergenic | 65.0% |
| GCCGAAGGAGATGCTGGAGG+TGG | - | chr2_3:1998847-1998866 | None:intergenic | 65.0% | |
| !! | GATGGTGGTGGTGGTGGTGG+TGG | - | chr2_3:1998733-1998752 | None:intergenic | 65.0% |
| GCCGAAGGAGATGCTGGAGG+TGG | - | chr2_3:1998847-1998866 | None:intergenic | 65.0% | |
| GGAGATGCTGGAGGTGGCCC+CGG | - | chr2_3:1998841-1998860 | None:intergenic | 70.0% | |
| GGAGATGCTGGAGGTGGCCC+CGG | - | chr2_3:1998841-1998860 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 1998313 | 1999272 | 1998313 | ID=Msa0270750;Name=Msa0270750 |
| chr2_3 | mRNA | 1998313 | 1999272 | 1998313 | ID=Msa0270750-mRNA-1;Parent=Msa0270750;Name=Msa0270750-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|-1|0|1|-1|1|1|0|319 |
| chr2_3 | exon | 1998313 | 1999272 | 1998313 | ID=Msa0270750-mRNA-1:exon:1022;Parent=Msa0270750-mRNA-1 |
| chr2_3 | CDS | 1998313 | 1999272 | 1998313 | ID=Msa0270750-mRNA-1:cds;Parent=Msa0270750-mRNA-1 |
| Gene Sequence |
| Protein sequence |
