Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0278090 | XP_003594400.1 | 91.865 | 504 | 12 | 1 | 1 | 475 | 1 | 504 | 0.0 | 916 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0278090 | sp|Q9Y805|CWC25_SCHPO | 36.076 | 158 | 86 | 5 | 1 | 148 | 1 | 153 | 3.47e-13 | 74.3 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0278090 | G7ISR9 | 91.865 | 504 | 12 | 1 | 1 | 475 | 1 | 504 | 0.0 | 916 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0032470 | Msa0278090 | 0.802075 | 6.663038e-49 | -8.615850e-47 |
| Msa0240300 | Msa0278090 | 0.831040 | 2.091575e-55 | -8.615850e-47 |
| Msa0278090 | Msa0324240 | 0.813211 | 2.870687e-51 | -8.615850e-47 |
| Msa0278090 | Msa0532980 | 0.800188 | 1.620070e-48 | -8.615850e-47 |
| Msa0278090 | Msa0564130 | 0.806704 | 7.229876e-50 | -8.615850e-47 |
| Msa0278090 | Msa0610250 | 0.801445 | 8.972772e-49 | -8.615850e-47 |
| Msa0278090 | Msa0667790 | 0.805478 | 1.309263e-49 | -8.615850e-47 |
| Msa0278090 | Msa0796440 | 0.831565 | 1.553043e-55 | -8.615850e-47 |
| Msa0278090 | Msa0828680 | 0.803619 | 3.197117e-49 | -8.615850e-47 |
| Msa0278090 | Msa1230040 | 0.810952 | 8.925111e-51 | -8.615850e-47 |
| Msa0278090 | Msa1272600 | 0.823234 | 1.545793e-53 | -8.615850e-47 |
| Msa0278090 | Msa1295910 | 0.806337 | 8.638817e-50 | -8.615850e-47 |
| Msa0278090 | Msa1310450 | 0.826742 | 2.296212e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0278090 | MtrunA17_Chr2g0291211 | 91.865 | 504 | 12 | 1 | 1 | 475 | 1 | 504 | 0.0 | 916 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0278090 | AT2G44200.1 | 48.521 | 507 | 215 | 8 | 1 | 475 | 1 | 493 | 7.45e-119 | 357 |
| Msa0278090 | AT2G44195.1 | 54.422 | 147 | 47 | 4 | 1 | 144 | 1 | 130 | 5.30e-41 | 144 |
Find 111 sgRNAs with CRISPR-Local
Find 253 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACAAAATCCGTCGTCAAAA+TGG | 0.174154 | 2_3:-10978285 | Msa0278090:exon |
| TCAAAATTGGACTGACCTTC+TGG | 0.234421 | 2_3:+10975368 | None:intergenic |
| ACCTTCATCTTCTGCTTCTA+AGG | 0.253394 | 2_3:-10977832 | Msa0278090:intron |
| GCATCTGTTGGATCGGATTT+AGG | 0.257562 | 2_3:+10977855 | None:intergenic |
| TTCGGAACATTGAAAATGTT+TGG | 0.269490 | 2_3:-10978220 | Msa0278090:CDS |
| TTCTAGTGGGAAGAATTTCT+TGG | 0.281360 | 2_3:-10975105 | Msa0278090:CDS |
| GCTTTGACTCCGGTGGTGAC+TGG | 0.293213 | 2_3:+10975562 | None:intergenic |
| CAGATCTGCCTTGAGAATAA+TGG | 0.299472 | 2_3:+10975006 | None:intergenic |
| TCCCACTAGAACTAGTGTTC+TGG | 0.324065 | 2_3:+10975117 | None:intergenic |
| TCATACTGTGTATCAAATAT+TGG | 0.324531 | 2_3:-10974854 | Msa0278090:three_prime_UTR |
| CTGATCATGGCCATCTTGAC+AGG | 0.327002 | 2_3:+10977529 | None:intergenic |
| TAGCGAATTTCGTCTTCTTC+AGG | 0.327928 | 2_3:-10978120 | Msa0278090:CDS |
| TAGCAGGATGCAAGTGTTCC+TGG | 0.338357 | 2_3:-10977670 | Msa0278090:intron |
| GATGTCTCTAAAAGGGGAAA+TGG | 0.339059 | 2_3:-10975347 | Msa0278090:CDS |
| CTCAATCTGCTAATGATTCT+TGG | 0.352391 | 2_3:-10977627 | Msa0278090:CDS |
| ACATTGCCGAAAGGAGAAAA+AGG | 0.363516 | 2_3:-10975796 | Msa0278090:CDS |
| GCTTTGACTCTGGTGATGAC+TGG | 0.368357 | 2_3:+10975460 | None:intergenic |
| GGTTCTGTGTTGACCCCAAA+TGG | 0.396114 | 2_3:+10978409 | None:intergenic |
| AGATCTGCCTTGAGAATAAT+GGG | 0.400539 | 2_3:+10975007 | None:intergenic |
| CCTTTCGGTAATGTCATCTT+CGG | 0.403954 | 2_3:+10975724 | None:intergenic |
| TATTCTCAAAACTGTTGTAA+TGG | 0.405749 | 2_3:+10974795 | None:intergenic |
| CTTGTCAAGGTCTTCATCAC+TGG | 0.406063 | 2_3:+10975688 | None:intergenic |
| GGAGCATATCTTCCTGACTT+TGG | 0.418274 | 2_3:+10975389 | None:intergenic |
| CATTATTCTCAAGGCAGATC+TGG | 0.426795 | 2_3:-10975005 | Msa0278090:CDS |
| TATGATTCGCCAGCGGGAAC+AGG | 0.432439 | 2_3:-10977578 | Msa0278090:CDS |
| CTTTGACTCCGGTGGTGACT+GGG | 0.443059 | 2_3:+10975563 | None:intergenic |
| CAAGCGCTTCCTGTTCCCGC+TGG | 0.444956 | 2_3:+10977569 | None:intergenic |
| AATGATAATAAGCCAAAGTC+AGG | 0.446428 | 2_3:-10975401 | Msa0278090:CDS |
| TAAAACATCTGAAGGTTTCA+AGG | 0.450452 | 2_3:-10977892 | Msa0278090:CDS |
| ACAAAATCCGTCGTCAAAAT+GGG | 0.451010 | 2_3:-10978284 | Msa0278090:exon |
| CTTGTCAAGGTCTTCATCAC+TGG | 0.454110 | 2_3:+10975772 | None:intergenic |
| CTCTCTTCTTCTGAAAGCTT+AGG | 0.457506 | 2_3:+10975242 | None:intergenic |
| CTTTGACTCTGGTGATGACT+GGG | 0.461334 | 2_3:+10975461 | None:intergenic |
| CTTGCTTATGATTCGCCAGC+GGG | 0.464554 | 2_3:-10977584 | Msa0278090:CDS |
| GATGGCCATGATCAGAAAAT+CGG | 0.465887 | 2_3:-10977521 | Msa0278090:intron |
| CTTTGACTTTGCTTTGACTC+CGG | 0.466375 | 2_3:+10975552 | None:intergenic |
| ATGAATCAAGTGAAGGAGAA+AGG | 0.467832 | 2_3:-10975634 | Msa0278090:CDS |
| TGGTAACAATGTCAGGTTGA+AGG | 0.472127 | 2_3:-10975914 | Msa0278090:intron |
| ATGTCTCTAAAAGGGGAAAT+GGG | 0.478643 | 2_3:-10975346 | Msa0278090:CDS |
| CAAGAATCATTAGCAGATTG+AGG | 0.486674 | 2_3:+10977628 | None:intergenic |
| CCTTGTGACGCTTCTTGTCA+AGG | 0.487865 | 2_3:+10975675 | None:intergenic |
| TCTTATGTTGGTACAAGGAC+AGG | 0.492316 | 2_3:+10974878 | None:intergenic |
| GGCTGAGGAGACTGATGCAC+AGG | 0.492502 | 2_3:-10975147 | Msa0278090:CDS |
| TGTTCCTGGAGCTTTATTTG+AGG | 0.492824 | 2_3:-10977656 | Msa0278090:CDS |
| TCCGTTGGTAAAACATCTGA+AGG | 0.495300 | 2_3:-10977900 | Msa0278090:CDS |
| GTTGGCACACGGGAAGTCTT+CGG | 0.502831 | 2_3:-10978238 | Msa0278090:CDS |
| TTCTCCTCAAATAAAGCTCC+AGG | 0.507556 | 2_3:+10977652 | None:intergenic |
| TACGATTCGGGATTATCCGT+TGG | 0.508802 | 2_3:-10977915 | Msa0278090:CDS |
| TTGATTTGATTGCAGTCACC+AGG | 0.511137 | 2_3:-10977955 | Msa0278090:intron |
| GAAGAAAGATCACAGTAAGA+AGG | 0.512623 | 2_3:-10975879 | Msa0278090:CDS |
| GCAGAAGATCTAGTAGAGCT+TGG | 0.513970 | 2_3:+10975311 | None:intergenic |
| GAAGATGAAGGTGCATCTGT+TGG | 0.515053 | 2_3:+10977843 | None:intergenic |
| GAGGTGAAGGCAATGCATTT+AGG | 0.517668 | 2_3:-10974983 | Msa0278090:CDS |
| AAGAGAGGGCTGCTAAACTT+AGG | 0.529004 | 2_3:-10975226 | Msa0278090:CDS |
| AACAAGAAGGGTTGGCACAC+GGG | 0.529610 | 2_3:-10978248 | Msa0278090:CDS |
| AGGAAAACACTCATGTAAGA+AGG | 0.530860 | 2_3:+10974898 | None:intergenic |
| GAGAATAATGGGTCCGCCGT+CGG | 0.532495 | 2_3:+10975018 | None:intergenic |
| TTGCAGTCACCAGGAGAGGT+TGG | 0.533295 | 2_3:-10977946 | Msa0278090:intron |
| AGTATATATGGTGCTGCAGA+AGG | 0.535345 | 2_3:-10975068 | Msa0278090:CDS |
| AGTTACATGAAGGGGAGAGA+TGG | 0.541273 | 2_3:-10975184 | Msa0278090:CDS |
| CTTGCTGCTGAGTTACATGA+AGG | 0.544624 | 2_3:-10975194 | Msa0278090:CDS |
| TGATCATGGCCATCTTGACA+GGG | 0.549411 | 2_3:+10977530 | None:intergenic |
| CAAGGCAGATCTGGAGGTGA+AGG | 0.555173 | 2_3:-10974996 | Msa0278090:CDS |
| ATCCAGAACACTAGTTCTAG+TGG | 0.561191 | 2_3:-10975119 | Msa0278090:CDS |
| TATATGGTGCTGCAGAAGGC+GGG | 0.561778 | 2_3:-10975064 | Msa0278090:CDS |
| ACAATGTCAGGTTGAAGGAA+AGG | 0.564296 | 2_3:-10975909 | Msa0278090:intron |
| GAACAAGAAGGGTTGGCACA+CGG | 0.565028 | 2_3:-10978249 | Msa0278090:CDS |
| CCTTGTGACGCATCTTGTCA+AGG | 0.568971 | 2_3:+10975759 | None:intergenic |
| GTTCTGTGTTGACCCCAAAT+GGG | 0.574656 | 2_3:+10978410 | None:intergenic |
| AATCTGCTAATGATTCTTGG+AGG | 0.575277 | 2_3:-10977624 | Msa0278090:CDS |
| TGCTGCTGAGTTACATGAAG+GGG | 0.576125 | 2_3:-10975192 | Msa0278090:CDS |
| GAGATGGAAACGTATAAAGA+AGG | 0.576882 | 2_3:-10975168 | Msa0278090:CDS |
| GAGAAGATGCTGATAACAGA+AGG | 0.581478 | 2_3:-10975523 | Msa0278090:CDS |
| ACACAGTATGAATCTTATGT+TGG | 0.581512 | 2_3:+10974866 | None:intergenic |
| GGTCCGCCGTCGGACACTCT+CGG | 0.582668 | 2_3:+10975028 | None:intergenic |
| CTAAGCTTTCAGAAGAAGAG+AGG | 0.584587 | 2_3:-10975241 | Msa0278090:CDS |
| TTGATTGCAGTCACCAGGAG+AGG | 0.587426 | 2_3:-10977950 | Msa0278090:intron |
| TGAAGGTGCATCTGTTGGAT+CGG | 0.591413 | 2_3:+10977848 | None:intergenic |
| TCAGAGAATGAATCAAGTGA+AGG | 0.591449 | 2_3:-10975641 | Msa0278090:CDS |
| AAAGATCTCCCAGTCACCAC+CGG | 0.592015 | 2_3:-10975571 | Msa0278090:CDS |
| TAAGCTTTCAGAAGAAGAGA+GGG | 0.592365 | 2_3:-10975240 | Msa0278090:CDS |
| AACGTGAATCACACTATAAG+CGG | 0.593117 | 2_3:-10975277 | Msa0278090:CDS |
| ACCTTAGAAGCAGAAGATGA+AGG | 0.594556 | 2_3:+10977831 | None:intergenic |
| CGGCGGACCCATTATTCTCA+AGG | 0.596299 | 2_3:-10975014 | Msa0278090:CDS |
| GGAAAACACTCATGTAAGAA+GGG | 0.598435 | 2_3:+10974899 | None:intergenic |
| CGCTGGCGAATCATAAGCAA+GGG | 0.600210 | 2_3:+10977586 | None:intergenic |
| ATATATGGTGCTGCAGAAGG+CGG | 0.601071 | 2_3:-10975065 | Msa0278090:CDS |
| TGACTTTGCTTTGACTCCGG+TGG | 0.602283 | 2_3:+10975555 | None:intergenic |
| ACACTATAAGCGGAGAAATG+TGG | 0.603511 | 2_3:-10975267 | Msa0278090:CDS |
| ATGAATCTTATGTTGGTACA+AGG | 0.611613 | 2_3:+10974873 | None:intergenic |
| GAAACGTATAAAGAAGGCTG+AGG | 0.613175 | 2_3:-10975162 | Msa0278090:CDS |
| CCGCTGGCGAATCATAAGCA+AGG | 0.621905 | 2_3:+10977585 | None:intergenic |
| AAAGGAACCCGACCCATTTG+GGG | 0.623110 | 2_3:-10978422 | None:intergenic |
| TATTCTCAAGGCAGATCTGG+AGG | 0.626200 | 2_3:-10975002 | Msa0278090:CDS |
| TCCAGAACACTAGTTCTAGT+GGG | 0.633784 | 2_3:-10975118 | Msa0278090:CDS |
| CCTTGACAAGATGCGTCACA+AGG | 0.636939 | 2_3:-10975759 | Msa0278090:CDS |
| TTGCTGCTGAGTTACATGAA+GGG | 0.639588 | 2_3:-10975193 | Msa0278090:CDS |
| TCAGGAAGATATGCTCCAGA+AGG | 0.642763 | 2_3:-10975383 | Msa0278090:CDS |
| TGAAATTGAGATAATGTGAA+CGG | 0.644929 | 2_3:+10974819 | None:intergenic |
| CCTTGACAAGAAGCGTCACA+AGG | 0.649341 | 2_3:-10975675 | Msa0278090:CDS |
| CATCACCAGAGTCAAAGCAA+AGG | 0.652067 | 2_3:-10975455 | Msa0278090:CDS |
| CAGACGATGACATTGCCGAA+AGG | 0.653552 | 2_3:-10975805 | Msa0278090:CDS |
| TTAAGTGATAGAAACACCAC+AGG | 0.663226 | 2_3:+10974948 | None:intergenic |
| CCTTGCTTATGATTCGCCAG+CGG | 0.663978 | 2_3:-10977585 | Msa0278090:CDS |
| CCGAAGATGACATTACCGAA+AGG | 0.667091 | 2_3:-10975724 | Msa0278090:CDS |
| TTGAGATAATGTGAACGGAG+AGG | 0.669571 | 2_3:+10974824 | None:intergenic |
| TAGCCGAGAGTGTCCGACGG+CGG | 0.678820 | 2_3:-10975031 | Msa0278090:CDS |
| GTGAAGGCAATGCATTTAGG+CGG | 0.692431 | 2_3:-10974980 | Msa0278090:CDS |
| GGAAGAGTAATTACGGAACG+AGG | 0.700559 | 2_3:+10978087 | None:intergenic |
| CAATAGCCGAGAGTGTCCGA+CGG | 0.714276 | 2_3:-10975034 | Msa0278090:CDS |
| TAGGCGGTAAATGCTGCCTG+TGG | 0.728070 | 2_3:-10974964 | Msa0278090:exon |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCAATTTTGATTATTTTTAT+TGG | - | chr2_3:10975119-10975138 | Msa0278090:CDS | 10.0% |
| !!! | TTTTATTAAATTATGTTACA+TGG | - | chr2_3:10976343-10976362 | Msa0278090:intron | 10.0% |
| !! | TAAAAATCCAAAAGAAAAAA+AGG | + | chr2_3:10975678-10975697 | None:intergenic | 15.0% |
| !! | GTTTATGAAATTATATTAGT+TGG | - | chr2_3:10975925-10975944 | Msa0278090:intron | 15.0% |
| !! | TAGATAGATACTATTTAATT+TGG | - | chr2_3:10976037-10976056 | Msa0278090:intron | 15.0% |
| !!! | AGATAGATACTATTTAATTT+GGG | - | chr2_3:10976038-10976057 | Msa0278090:intron | 15.0% |
| !!! | TATGAAATTTTTGAACAAGA+AGG | - | chr2_3:10974908-10974927 | Msa0278090:three_prime_UTR | 20.0% |
| !!! | ATGAAATTTTTGAACAAGAA+GGG | - | chr2_3:10974909-10974928 | Msa0278090:three_prime_UTR | 20.0% |
| !! | TCAAAATTGAGAATTGAATT+GGG | + | chr2_3:10975109-10975128 | None:intergenic | 20.0% |
| !! | ATCAAAATTGAGAATTGAAT+TGG | + | chr2_3:10975110-10975129 | None:intergenic | 20.0% |
| !!! | AAATCCCAAATTGATTTTTT+AGG | - | chr2_3:10975144-10975163 | Msa0278090:CDS | 20.0% |
| !!! | AATCCCAAATTGATTTTTTA+GGG | - | chr2_3:10975145-10975164 | Msa0278090:CDS | 20.0% |
| !! | TAACCCTAAAAAATCAATTT+GGG | + | chr2_3:10975151-10975170 | None:intergenic | 20.0% |
| !!! | AAATTGATTTTTTAGGGTTA+GGG | - | chr2_3:10975151-10975170 | Msa0278090:CDS | 20.0% |
| !! | AAAACAGAAAAACAAATCAT+TGG | + | chr2_3:10975384-10975403 | None:intergenic | 20.0% |
| !!! | TGTTGATTGAATTTGAATTT+AGG | - | chr2_3:10975432-10975451 | Msa0278090:CDS | 20.0% |
| !! | GTTGATTGAATTTGAATTTA+GGG | - | chr2_3:10975433-10975452 | Msa0278090:CDS | 20.0% |
| !! | ATTTATAGTGAATTGAATCA+TGG | - | chr2_3:10975463-10975482 | Msa0278090:CDS | 20.0% |
| !! | ATTTATAACACAATACTATG+AGG | - | chr2_3:10975878-10975897 | Msa0278090:CDS | 20.0% |
| !! | GAAAATAAAATTGAATCAGA+AGG | + | chr2_3:10976796-10976815 | None:intergenic | 20.0% |
| !! | TTATAAGCAACATAATTTCA+TGG | + | chr2_3:10977114-10977133 | None:intergenic | 20.0% |
| !! | TTAAATTGCATTTACTAATC+AGG | - | chr2_3:10977194-10977213 | Msa0278090:intron | 20.0% |
| !!! | AAACAACTGTTTCTAATTTA+TGG | - | chr2_3:10977224-10977243 | Msa0278090:intron | 20.0% |
| ! | AAAATTGAGAATTGAATTGG+GGG | + | chr2_3:10975107-10975126 | None:intergenic | 25.0% |
| ! | CAAAATTGAGAATTGAATTG+GGG | + | chr2_3:10975108-10975127 | None:intergenic | 25.0% |
| ! | CTAACCCTAAAAAATCAATT+TGG | + | chr2_3:10975152-10975171 | None:intergenic | 25.0% |
| !!! | CAAATTGATTTTTTAGGGTT+AGG | - | chr2_3:10975150-10975169 | Msa0278090:CDS | 25.0% |
| !! | TCTTTATAGTTGTGCATTTT+TGG | - | chr2_3:10975709-10975728 | Msa0278090:CDS | 25.0% |
| ! | GAGTCTAGTTAAGTTAATTA+CGG | + | chr2_3:10976011-10976030 | None:intergenic | 25.0% |
| ! | AAATAGTATCTATCTACACA+AGG | + | chr2_3:10976033-10976052 | None:intergenic | 25.0% |
| ! | ATTTATAACACAATACTACG+AGG | - | chr2_3:10976296-10976315 | Msa0278090:intron | 25.0% |
| !! | TAGATAGATACTGTTTTACT+TGG | - | chr2_3:10976455-10976474 | Msa0278090:intron | 25.0% |
| !! | AGATAGATACTGTTTTACTT+GGG | - | chr2_3:10976456-10976475 | Msa0278090:intron | 25.0% |
| !!! | ATTCCTTTTTTGATCTTTGT+TGG | - | chr2_3:10976496-10976515 | Msa0278090:intron | 25.0% |
| ! | AAACCAACAAAGATCAAAAA+AGG | + | chr2_3:10976502-10976521 | None:intergenic | 25.0% |
| !!! | TTTTTGATCTTTGTTGGTTT+AGG | - | chr2_3:10976502-10976521 | Msa0278090:intron | 25.0% |
| !! | AAATCGAATGACAATGTTTT+GGG | + | chr2_3:10976894-10976913 | None:intergenic | 25.0% |
| !! | AAAATCGAATGACAATGTTT+TGG | + | chr2_3:10976895-10976914 | None:intergenic | 25.0% |
| ! | ATATATTTATAGCAGCAGAA+GGG | + | chr2_3:10976923-10976942 | None:intergenic | 25.0% |
| ! | AATATATTTATAGCAGCAGA+AGG | + | chr2_3:10976924-10976943 | None:intergenic | 25.0% |
| !!! | TGTTTTATGCTTTGATTTAC+TGG | + | chr2_3:10977334-10977353 | None:intergenic | 25.0% |
| !!! | CAATTTTGATGTCTCTAAAA+GGG | - | chr2_3:10977815-10977834 | Msa0278090:intron | 25.0% |
| !!! | AATTTTGATGTCTCTAAAAG+GGG | - | chr2_3:10977816-10977835 | Msa0278090:intron | 25.0% |
| !! | ACTGCTCAAAAAAGTATATA+TGG | - | chr2_3:10978089-10978108 | Msa0278090:intron | 25.0% |
| ! | TCATACTGTGTATCAAATAT+TGG | - | chr2_3:10978315-10978334 | Msa0278090:five_prime_UTR | 25.0% |
| ! | TGAAATTGAGATAATGTGAA+CGG | + | chr2_3:10978353-10978372 | None:intergenic | 25.0% |
| ! | TATTCTCAAAACTGTTGTAA+TGG | + | chr2_3:10978377-10978396 | None:intergenic | 25.0% |
| ! | AATTTTTGAACAAGAAGGGT+TGG | - | chr2_3:10974913-10974932 | Msa0278090:three_prime_UTR | 30.0% |
| TTCGGAACATTGAAAATGTT+TGG | - | chr2_3:10974949-10974968 | Msa0278090:three_prime_UTR | 30.0% | |
| !!! | TTCATCGAGTTTTTTCTCTT+CGG | + | chr2_3:10974997-10975016 | None:intergenic | 30.0% |
| AAATTGAGAATTGAATTGGG+GGG | + | chr2_3:10975106-10975125 | None:intergenic | 30.0% | |
| ! | GTTGGAGTTTTTATACGATT+CGG | - | chr2_3:10975241-10975260 | Msa0278090:CDS | 30.0% |
| ! | TTGGAGTTTTTATACGATTC+GGG | - | chr2_3:10975242-10975261 | Msa0278090:CDS | 30.0% |
| TAAAACATCTGAAGGTTTCA+AGG | - | chr2_3:10975277-10975296 | Msa0278090:CDS | 30.0% | |
| ! | ATTGAATCATGGTTTTTGTG+TGG | - | chr2_3:10975474-10975493 | Msa0278090:CDS | 30.0% |
| !!! | TATAGTTGTGCATTTTTGGT+TGG | - | chr2_3:10975713-10975732 | Msa0278090:CDS | 30.0% |
| !!! | TTCGTAGTTTAGTTTTGCTT+TGG | - | chr2_3:10975753-10975772 | Msa0278090:CDS | 30.0% |
| !!! | TTAGTTTTGCTTTGGTTGAT+TGG | - | chr2_3:10975761-10975780 | Msa0278090:CDS | 30.0% |
| !! | TAGTTTTGCTTTGGTTGATT+GGG | - | chr2_3:10975762-10975781 | Msa0278090:CDS | 30.0% |
| AAATGCGAGAAAATTAGAGA+AGG | + | chr2_3:10975862-10975881 | None:intergenic | 30.0% | |
| AATGAGATATGAAGAGTTCA+AGG | - | chr2_3:10975902-10975921 | Msa0278090:CDS | 30.0% | |
| ATGAGATATGAAGAGTTCAA+GGG | - | chr2_3:10975903-10975922 | Msa0278090:intron | 30.0% | |
| ATTCCTTTGTTGATCTTTGT+TGG | - | chr2_3:10976078-10976097 | Msa0278090:intron | 30.0% | |
| AAACCAACAAAGATCAACAA+AGG | + | chr2_3:10976084-10976103 | None:intergenic | 30.0% | |
| !! | TTGTTGATCTTTGTTGGTTT+AGG | - | chr2_3:10976084-10976103 | Msa0278090:intron | 30.0% |
| GCTTGGTTACTATTGTATTT+CGG | - | chr2_3:10976152-10976171 | Msa0278090:intron | 30.0% | |
| ! | AGCTTTGGTTGATTGATTAT+TGG | - | chr2_3:10976185-10976204 | Msa0278090:intron | 30.0% |
| GCTTTGGTTGATTGATTATT+GGG | - | chr2_3:10976186-10976205 | Msa0278090:intron | 30.0% | |
| AACAGGTAAAAAGATGCTAT+CGG | + | chr2_3:10976259-10976278 | None:intergenic | 30.0% | |
| TGAACCAGATTTCTTACTTT+GGG | - | chr2_3:10976578-10976597 | Msa0278090:intron | 30.0% | |
| TGTAAATTGTTAGAACTTGC+TGG | - | chr2_3:10976645-10976664 | Msa0278090:intron | 30.0% | |
| ! | ATTCCTTAGTTACAAGGTTT+TGG | + | chr2_3:10976748-10976767 | None:intergenic | 30.0% |
| TTGGAAATTCCTTAGTTACA+AGG | + | chr2_3:10976754-10976773 | None:intergenic | 30.0% | |
| AAATTGAATCAGAAGGCTTA+TGG | + | chr2_3:10976789-10976808 | None:intergenic | 30.0% | |
| !! | ATTTTCCATCTTAAGTTGCA+TGG | - | chr2_3:10976810-10976829 | Msa0278090:intron | 30.0% |
| !! | TTTTCCATCTTAAGTTGCAT+GGG | - | chr2_3:10976811-10976830 | Msa0278090:intron | 30.0% |
| TTAGCTGATGTTCAATAACA+AGG | + | chr2_3:10976839-10976858 | None:intergenic | 30.0% | |
| AAGTTAGACCATAACATTGT+AGG | - | chr2_3:10976863-10976882 | Msa0278090:intron | 30.0% | |
| AATGATAATAAGCCAAAGTC+AGG | - | chr2_3:10977768-10977787 | Msa0278090:intron | 30.0% | |
| !! | CCTTTTAGAGACATCAAAAT+TGG | + | chr2_3:10977817-10977836 | None:intergenic | 30.0% |
| !! | CCAATTTTGATGTCTCTAAA+AGG | - | chr2_3:10977814-10977833 | Msa0278090:intron | 30.0% |
| ATGAATCTTATGTTGGTACA+AGG | + | chr2_3:10978299-10978318 | None:intergenic | 30.0% | |
| ACACAGTATGAATCTTATGT+TGG | + | chr2_3:10978306-10978325 | None:intergenic | 30.0% | |
| AAAGAAAAATCGCGCTATTG+CGG | + | chr2_3:10974784-10974803 | None:intergenic | 35.0% | |
| AACAAAATCCGTCGTCAAAA+TGG | - | chr2_3:10974884-10974903 | Msa0278090:three_prime_UTR | 35.0% | |
| ACAAAATCCGTCGTCAAAAT+GGG | - | chr2_3:10974885-10974904 | Msa0278090:three_prime_UTR | 35.0% | |
| !! | TTTCATACCCATTTTGACGA+CGG | + | chr2_3:10974895-10974914 | None:intergenic | 35.0% |
| ! | ACCTTCAGATGTTTTACCAA+CGG | + | chr2_3:10975273-10975292 | None:intergenic | 35.0% |
| CAAGAATCATTAGCAGATTG+AGG | + | chr2_3:10975544-10975563 | None:intergenic | 35.0% | |
| CTCAATCTGCTAATGATTCT+TGG | - | chr2_3:10975542-10975561 | Msa0278090:CDS | 35.0% | |
| AATCTGCTAATGATTCTTGG+AGG | - | chr2_3:10975545-10975564 | Msa0278090:CDS | 35.0% | |
| TAAAAACAACCCTGTCAAGA+TGG | - | chr2_3:10975630-10975649 | Msa0278090:CDS | 35.0% | |
| !!! | CGGTAAGCCTTTTTTTCTTT+TGG | - | chr2_3:10975668-10975687 | Msa0278090:CDS | 35.0% |
| TGCATTCAAGACCATGAATA+AGG | + | chr2_3:10976216-10976235 | None:intergenic | 35.0% | |
| GCGAGAAAATTAGAGAAAAC+AGG | + | chr2_3:10976276-10976295 | None:intergenic | 35.0% | |
| GTGAACCAGATTTCTTACTT+TGG | - | chr2_3:10976577-10976596 | Msa0278090:intron | 35.0% | |
| CTTACCCAAAGTAAGAAATC+TGG | + | chr2_3:10976585-10976604 | None:intergenic | 35.0% | |
| GATTTCTTACTTTGGGTAAG+AGG | - | chr2_3:10976585-10976604 | Msa0278090:intron | 35.0% | |
| TTTGGGTAAGAGGAATTACA+GGG | - | chr2_3:10976595-10976614 | Msa0278090:intron | 35.0% | |
| ! | TACCTTTTGCCATTATTTGC+CGG | - | chr2_3:10976674-10976693 | Msa0278090:intron | 35.0% |
| !! | CTTAGTTACAAGGTTTTGGT+AGG | + | chr2_3:10976744-10976763 | None:intergenic | 35.0% |
| CTACCAAAACCTTGTAACTA+AGG | - | chr2_3:10976742-10976761 | Msa0278090:intron | 35.0% | |
| GGGAAATTCCTACAATGTTA+TGG | + | chr2_3:10976874-10976893 | None:intergenic | 35.0% | |
| GTTTACTTCAGCTTCTGTTT+AGG | - | chr2_3:10976985-10977004 | Msa0278090:intron | 35.0% | |
| AAATAGCATGACCATTCCTT+AGG | + | chr2_3:10977049-10977068 | None:intergenic | 35.0% | |
| AATACTCATGTCTCATGTGT+TGG | - | chr2_3:10977133-10977152 | Msa0278090:intron | 35.0% | |
| ATACTCATGTCTCATGTGTT+GGG | - | chr2_3:10977134-10977153 | Msa0278090:intron | 35.0% | |
| TCTAATTTATGGCCTGTCTT+TGG | - | chr2_3:10977235-10977254 | Msa0278090:intron | 35.0% | |
| GAAGAAAGATCACAGTAAGA+AGG | - | chr2_3:10977290-10977309 | Msa0278090:intron | 35.0% | |
| TTACCGAAAGGAGAAAAAGA+AGG | - | chr2_3:10977457-10977476 | Msa0278090:intron | 35.0% | |
| TCAGAGAATGAATCAAGTGA+AGG | - | chr2_3:10977528-10977547 | Msa0278090:CDS | 35.0% | |
| ATGAATCAAGTGAAGGAGAA+AGG | - | chr2_3:10977535-10977554 | Msa0278090:CDS | 35.0% | |
| ! | ATGTCTCTAAAAGGGGAAAT+GGG | - | chr2_3:10977823-10977842 | Msa0278090:intron | 35.0% |
| AACGTGAATCACACTATAAG+CGG | - | chr2_3:10977892-10977911 | Msa0278090:CDS | 35.0% | |
| TAAGCTTTCAGAAGAAGAGA+GGG | - | chr2_3:10977929-10977948 | Msa0278090:CDS | 35.0% | |
| GAGATGGAAACGTATAAAGA+AGG | - | chr2_3:10978001-10978020 | Msa0278090:intron | 35.0% | |
| TTCTAGTGGGAAGAATTTCT+TGG | - | chr2_3:10978064-10978083 | Msa0278090:intron | 35.0% | |
| AGATCTGCCTTGAGAATAAT+GGG | + | chr2_3:10978165-10978184 | None:intergenic | 35.0% | |
| TTAAGTGATAGAAACACCAC+AGG | + | chr2_3:10978224-10978243 | None:intergenic | 35.0% | |
| GGAAAACACTCATGTAAGAA+GGG | + | chr2_3:10978273-10978292 | None:intergenic | 35.0% | |
| AGGAAAACACTCATGTAAGA+AGG | + | chr2_3:10978274-10978293 | None:intergenic | 35.0% | |
| TAGCGAATTTCGTCTTCTTC+AGG | - | chr2_3:10975049-10975068 | Msa0278090:CDS | 40.0% | |
| ATTGGGGGGAAGAGTAATTA+CGG | + | chr2_3:10975092-10975111 | None:intergenic | 40.0% | |
| ! | TTGATTTGATTGCAGTCACC+AGG | - | chr2_3:10975214-10975233 | Msa0278090:CDS | 40.0% |
| ATAAAAACTCCAACCTCTCC+TGG | + | chr2_3:10975235-10975254 | None:intergenic | 40.0% | |
| ! | TCCGTTGGTAAAACATCTGA+AGG | - | chr2_3:10975269-10975288 | Msa0278090:CDS | 40.0% |
| ACCTTCATCTTCTGCTTCTA+AGG | - | chr2_3:10975337-10975356 | Msa0278090:CDS | 40.0% | |
| ACCTTAGAAGCAGAAGATGA+AGG | + | chr2_3:10975341-10975360 | None:intergenic | 40.0% | |
| ! | TGGTTTTTGTGTGGTTTAGC+AGG | - | chr2_3:10975483-10975502 | Msa0278090:CDS | 40.0% |
| !! | TGTTCCTGGAGCTTTATTTG+AGG | - | chr2_3:10975513-10975532 | Msa0278090:CDS | 40.0% |
| TTCTCCTCAAATAAAGCTCC+AGG | + | chr2_3:10975520-10975539 | None:intergenic | 40.0% | |
| GATGGCCATGATCAGAAAAT+CGG | - | chr2_3:10975648-10975667 | Msa0278090:CDS | 40.0% | |
| !!! | GCTTACCGATTTTCTGATCA+TGG | + | chr2_3:10975656-10975675 | None:intergenic | 40.0% |
| TGCTTTGGTTGATTGGGTAT+TGG | - | chr2_3:10975768-10975787 | Msa0278090:CDS | 40.0% | |
| GCTTTGGTTGATTGGGTATT+GGG | - | chr2_3:10975769-10975788 | Msa0278090:CDS | 40.0% | |
| CTTATGCATAGTCTTCACTG+CGG | - | chr2_3:10975797-10975816 | Msa0278090:CDS | 40.0% | |
| TCGAGAGTTAGAGAATTGCA+AGG | - | chr2_3:10975971-10975990 | Msa0278090:intron | 40.0% | |
| TAAAGTCAAACCAGTACGCT+TGG | - | chr2_3:10976135-10976154 | Msa0278090:intron | 40.0% | |
| ACAATAGTAACCAAGCGTAC+TGG | + | chr2_3:10976148-10976167 | None:intergenic | 40.0% | |
| !! | TATTGGGTCAGCCTTATTCA+TGG | - | chr2_3:10976202-10976221 | Msa0278090:intron | 40.0% |
| TCGAGAGTTAGTGAATTGCA+AGG | - | chr2_3:10976389-10976408 | Msa0278090:intron | 40.0% | |
| CTTTGGGTAAGAGGAATTAC+AGG | - | chr2_3:10976594-10976613 | Msa0278090:intron | 40.0% | |
| TTGGGTAAGAGGAATTACAG+GGG | - | chr2_3:10976596-10976615 | Msa0278090:intron | 40.0% | |
| !! | TTGTTAGAACTTGCTGGTGT+AGG | - | chr2_3:10976651-10976670 | Msa0278090:intron | 40.0% |
| ! | ACCTTTTGCCATTATTTGCC+GGG | - | chr2_3:10976675-10976694 | Msa0278090:intron | 40.0% |
| TATTTATAGCAGCAGAAGGG+TGG | + | chr2_3:10976920-10976939 | None:intergenic | 40.0% | |
| AACAGAAGCTGAAGTAAACG+AGG | + | chr2_3:10976984-10977003 | None:intergenic | 40.0% | |
| CTGACATTGTTACCAAAGAC+AGG | + | chr2_3:10977250-10977269 | None:intergenic | 40.0% | |
| ! | CTGTCTTTGGTAACAATGTC+AGG | - | chr2_3:10977248-10977267 | Msa0278090:intron | 40.0% |
| !! | TGGTAACAATGTCAGGTTGA+AGG | - | chr2_3:10977255-10977274 | Msa0278090:intron | 40.0% |
| !! | ACAATGTCAGGTTGAAGGAA+AGG | - | chr2_3:10977260-10977279 | Msa0278090:intron | 40.0% |
| ACATTGCCGAAAGGAGAAAA+AGG | - | chr2_3:10977373-10977392 | Msa0278090:intron | 40.0% | |
| ! | ACTGGTCCTTTTTCTCCTTT+CGG | + | chr2_3:10977382-10977401 | None:intergenic | 40.0% |
| CCTTTCGGTAATGTCATCTT+CGG | + | chr2_3:10977448-10977467 | None:intergenic | 40.0% | |
| ! | GGTCCTTCTTTTTCTCCTTT+CGG | + | chr2_3:10977463-10977482 | None:intergenic | 40.0% |
| ! | CTTTGACTTTGCTTTGACTC+CGG | + | chr2_3:10977620-10977639 | None:intergenic | 40.0% |
| GAGAAGATGCTGATAACAGA+AGG | - | chr2_3:10977646-10977665 | Msa0278090:CDS | 40.0% | |
| ! | CTTTTCCTTTGCTTTGACTC+TGG | + | chr2_3:10977722-10977741 | None:intergenic | 40.0% |
| TCAAAATTGGACTGACCTTC+TGG | + | chr2_3:10977804-10977823 | None:intergenic | 40.0% | |
| ! | GATGTCTCTAAAAGGGGAAA+TGG | - | chr2_3:10977822-10977841 | Msa0278090:intron | 40.0% |
| ACACTATAAGCGGAGAAATG+TGG | - | chr2_3:10977902-10977921 | Msa0278090:CDS | 40.0% | |
| ! | CTCTCTTCTTCTGAAAGCTT+AGG | + | chr2_3:10977930-10977949 | None:intergenic | 40.0% |
| CTAAGCTTTCAGAAGAAGAG+AGG | - | chr2_3:10977928-10977947 | Msa0278090:CDS | 40.0% | |
| TTGCTGCTGAGTTACATGAA+GGG | - | chr2_3:10977976-10977995 | Msa0278090:intron | 40.0% | |
| GAAACGTATAAAGAAGGCTG+AGG | - | chr2_3:10978007-10978026 | Msa0278090:intron | 40.0% | |
| !! | ATCCAGAACACTAGTTCTAG+TGG | - | chr2_3:10978050-10978069 | Msa0278090:intron | 40.0% |
| !! | TCCAGAACACTAGTTCTAGT+GGG | - | chr2_3:10978051-10978070 | Msa0278090:intron | 40.0% |
| !! | AGTATATATGGTGCTGCAGA+AGG | - | chr2_3:10978101-10978120 | Msa0278090:CDS | 40.0% |
| CAGATCTGCCTTGAGAATAA+TGG | + | chr2_3:10978166-10978185 | None:intergenic | 40.0% | |
| CATTATTCTCAAGGCAGATC+TGG | - | chr2_3:10978164-10978183 | Msa0278090:CDS | 40.0% | |
| TCTTATGTTGGTACAAGGAC+AGG | + | chr2_3:10978294-10978313 | None:intergenic | 40.0% | |
| TTGAGATAATGTGAACGGAG+AGG | + | chr2_3:10978348-10978367 | None:intergenic | 40.0% | |
| ! | TTCGGCGCTATGCTTTTGTT+CGG | + | chr2_3:10974979-10974998 | None:intergenic | 45.0% |
| CGTCTTCTTCAGGAAAAAGC+TGG | - | chr2_3:10975059-10975078 | Msa0278090:CDS | 45.0% | |
| GGAAGAGTAATTACGGAACG+AGG | + | chr2_3:10975085-10975104 | None:intergenic | 45.0% | |
| ! | TACGATTCGGGATTATCCGT+TGG | - | chr2_3:10975254-10975273 | Msa0278090:CDS | 45.0% |
| GCATCTGTTGGATCGGATTT+AGG | + | chr2_3:10975317-10975336 | None:intergenic | 45.0% | |
| ! | TGAAGGTGCATCTGTTGGAT+CGG | + | chr2_3:10975324-10975343 | None:intergenic | 45.0% |
| ! | GAAGATGAAGGTGCATCTGT+TGG | + | chr2_3:10975329-10975348 | None:intergenic | 45.0% |
| TGATCATGGCCATCTTGACA+GGG | + | chr2_3:10975642-10975661 | None:intergenic | 45.0% | |
| CGCAGTGAAGACTATGCATA+AGG | + | chr2_3:10975799-10975818 | None:intergenic | 45.0% | |
| GCGAGAAAATTAGAGAAGGC+AGG | + | chr2_3:10975858-10975877 | None:intergenic | 45.0% | |
| ! | TTCGGCTCGTAGTTTAGCTT+TGG | - | chr2_3:10976170-10976189 | Msa0278090:intron | 45.0% |
| GAGTTAGTGAATTGCAAGGC+AGG | - | chr2_3:10976393-10976412 | Msa0278090:intron | 45.0% | |
| GTTCACACACACAAGTGTAC+TGG | + | chr2_3:10976563-10976582 | None:intergenic | 45.0% | |
| ! | CCTTTTGCCATTATTTGCCG+GGG | - | chr2_3:10976676-10976695 | Msa0278090:intron | 45.0% |
| ATTGCATCCCCGGCAAATAA+TGG | + | chr2_3:10976686-10976705 | None:intergenic | 45.0% | |
| CACAATGCATATTGCATCCC+CGG | + | chr2_3:10976696-10976715 | None:intergenic | 45.0% | |
| CTTATGGCAGCAGAGTGTAT+TGG | + | chr2_3:10976773-10976792 | None:intergenic | 45.0% | |
| CTGAAGTAAACGAGGAGGTT+AGG | + | chr2_3:10976976-10976995 | None:intergenic | 45.0% | |
| AGAAGCTGAAGTAAACGAGG+AGG | + | chr2_3:10976981-10977000 | None:intergenic | 45.0% | |
| !! | TAGGAAGCCGTAATGGACAA+GGG | + | chr2_3:10977030-10977049 | None:intergenic | 45.0% |
| !! | TTAGGAAGCCGTAATGGACA+AGG | + | chr2_3:10977031-10977050 | None:intergenic | 45.0% |
| TTGTCCATTACGGCTTCCTA+AGG | - | chr2_3:10977030-10977049 | Msa0278090:intron | 45.0% | |
| CATTCCTTAGGAAGCCGTAA+TGG | + | chr2_3:10977037-10977056 | None:intergenic | 45.0% | |
| CATTACGGCTTCCTAAGGAA+TGG | - | chr2_3:10977035-10977054 | Msa0278090:intron | 45.0% | |
| CTTGTCAAGGTCTTCATCAC+TGG | + | chr2_3:10977400-10977419 | None:intergenic | 45.0% | |
| CCGAAGATGACATTACCGAA+AGG | - | chr2_3:10977445-10977464 | Msa0278090:intron | 45.0% | |
| CTTGTCAAGGTCTTCATCAC+TGG | + | chr2_3:10977400-10977419 | None:intergenic | 45.0% | |
| ! | CTTTGACTCTGGTGATGACT+GGG | + | chr2_3:10977711-10977730 | None:intergenic | 45.0% |
| CATCACCAGAGTCAAAGCAA+AGG | - | chr2_3:10977714-10977733 | Msa0278090:intron | 45.0% | |
| GGAGCATATCTTCCTGACTT+TGG | + | chr2_3:10977783-10977802 | None:intergenic | 45.0% | |
| TCAGGAAGATATGCTCCAGA+AGG | - | chr2_3:10977786-10977805 | Msa0278090:intron | 45.0% | |
| GCAGAAGATCTAGTAGAGCT+TGG | + | chr2_3:10977861-10977880 | None:intergenic | 45.0% | |
| AAGAGAGGGCTGCTAAACTT+AGG | - | chr2_3:10977943-10977962 | Msa0278090:CDS | 45.0% | |
| CTTGCTGCTGAGTTACATGA+AGG | - | chr2_3:10977975-10977994 | Msa0278090:intron | 45.0% | |
| TGCTGCTGAGTTACATGAAG+GGG | - | chr2_3:10977977-10977996 | Msa0278090:intron | 45.0% | |
| AGTTACATGAAGGGGAGAGA+TGG | - | chr2_3:10977985-10978004 | Msa0278090:intron | 45.0% | |
| TCCCACTAGAACTAGTGTTC+TGG | + | chr2_3:10978055-10978074 | None:intergenic | 45.0% | |
| !! | ATATATGGTGCTGCAGAAGG+CGG | - | chr2_3:10978104-10978123 | Msa0278090:CDS | 45.0% |
| TATTCTCAAGGCAGATCTGG+AGG | - | chr2_3:10978167-10978186 | Msa0278090:CDS | 45.0% | |
| GAGGTGAAGGCAATGCATTT+AGG | - | chr2_3:10978186-10978205 | Msa0278090:CDS | 45.0% | |
| GTGAAGGCAATGCATTTAGG+CGG | - | chr2_3:10978189-10978208 | Msa0278090:CDS | 45.0% | |
| ! | GAACAAGAAGGGTTGGCACA+CGG | - | chr2_3:10974920-10974939 | Msa0278090:three_prime_UTR | 50.0% |
| ! | AACAAGAAGGGTTGGCACAC+GGG | - | chr2_3:10974921-10974940 | Msa0278090:three_prime_UTR | 50.0% |
| TTGATTGCAGTCACCAGGAG+AGG | - | chr2_3:10975219-10975238 | Msa0278090:CDS | 50.0% | |
| TAGCAGGATGCAAGTGTTCC+TGG | - | chr2_3:10975499-10975518 | Msa0278090:CDS | 50.0% | |
| CGCTGGCGAATCATAAGCAA+GGG | + | chr2_3:10975586-10975605 | None:intergenic | 50.0% | |
| CCTTGCTTATGATTCGCCAG+CGG | - | chr2_3:10975584-10975603 | Msa0278090:CDS | 50.0% | |
| CTTGCTTATGATTCGCCAGC+GGG | - | chr2_3:10975585-10975604 | Msa0278090:CDS | 50.0% | |
| CTGATCATGGCCATCTTGAC+AGG | + | chr2_3:10975643-10975662 | None:intergenic | 50.0% | |
| CCCCGGCAAATAATGGCAAA+AGG | + | chr2_3:10976679-10976698 | None:intergenic | 50.0% | |
| CGGGGATGCAATATGCATTG+TGG | - | chr2_3:10976694-10976713 | Msa0278090:intron | 50.0% | |
| GGCTCCCATGCAACTTAAGA+TGG | + | chr2_3:10976818-10976837 | None:intergenic | 50.0% | |
| ATGCAGCCCCTTGTCCATTA+CGG | - | chr2_3:10977020-10977039 | Msa0278090:intron | 50.0% | |
| !! | AGGAAGCCGTAATGGACAAG+GGG | + | chr2_3:10977029-10977048 | None:intergenic | 50.0% |
| CAGACGATGACATTGCCGAA+AGG | - | chr2_3:10977364-10977383 | Msa0278090:intron | 50.0% | |
| CCTTGTGACGCATCTTGTCA+AGG | + | chr2_3:10977413-10977432 | None:intergenic | 50.0% | |
| CCTTGACAAGATGCGTCACA+AGG | - | chr2_3:10977410-10977429 | Msa0278090:intron | 50.0% | |
| CCTTGTGACGCTTCTTGTCA+AGG | + | chr2_3:10977497-10977516 | None:intergenic | 50.0% | |
| !! | CCTTGACAAGAAGCGTCACA+AGG | - | chr2_3:10977494-10977513 | Msa0278090:intron | 50.0% |
| AAAGATCTCCCAGTCACCAC+CGG | - | chr2_3:10977598-10977617 | Msa0278090:CDS | 50.0% | |
| TGACTTTGCTTTGACTCCGG+TGG | + | chr2_3:10977617-10977636 | None:intergenic | 50.0% | |
| ! | GCTTTGACTCTGGTGATGAC+TGG | + | chr2_3:10977712-10977731 | None:intergenic | 50.0% |
| !! | TATATGGTGCTGCAGAAGGC+GGG | - | chr2_3:10978105-10978124 | Msa0278090:CDS | 50.0% |
| GTTGGCACACGGGAAGTCTT+CGG | - | chr2_3:10974931-10974950 | Msa0278090:three_prime_UTR | 55.0% | |
| TTGCAGTCACCAGGAGAGGT+TGG | - | chr2_3:10975223-10975242 | Msa0278090:CDS | 55.0% | |
| CCGCTGGCGAATCATAAGCA+AGG | + | chr2_3:10975587-10975606 | None:intergenic | 55.0% | |
| TATGATTCGCCAGCGGGAAC+AGG | - | chr2_3:10975591-10975610 | Msa0278090:CDS | 55.0% | |
| !! | GTAATGGACAAGGGGCTGCA+TGG | + | chr2_3:10977021-10977040 | None:intergenic | 55.0% |
| CTTTGACTCCGGTGGTGACT+GGG | + | chr2_3:10977609-10977628 | None:intergenic | 55.0% | |
| !! | CAATAGCCGAGAGTGTCCGA+CGG | - | chr2_3:10978135-10978154 | Msa0278090:CDS | 55.0% |
| !! | GAGAATAATGGGTCCGCCGT+CGG | + | chr2_3:10978154-10978173 | None:intergenic | 55.0% |
| CGGCGGACCCATTATTCTCA+AGG | - | chr2_3:10978155-10978174 | Msa0278090:CDS | 55.0% | |
| CAAGGCAGATCTGGAGGTGA+AGG | - | chr2_3:10978173-10978192 | Msa0278090:CDS | 55.0% | |
| TAGGCGGTAAATGCTGCCTG+TGG | - | chr2_3:10978205-10978224 | Msa0278090:CDS | 55.0% | |
| AAGGGGCTGCATGGCATGGA+TGG | + | chr2_3:10977012-10977031 | None:intergenic | 60.0% | |
| GCTTTGACTCCGGTGGTGAC+TGG | + | chr2_3:10977610-10977629 | None:intergenic | 60.0% | |
| GGCTGAGGAGACTGATGCAC+AGG | - | chr2_3:10978022-10978041 | Msa0278090:intron | 60.0% | |
| CAAGCGCTTCCTGTTCCCGC+TGG | + | chr2_3:10975603-10975622 | None:intergenic | 65.0% | |
| GGACAAGGGGCTGCATGGCA+TGG | + | chr2_3:10977016-10977035 | None:intergenic | 65.0% | |
| !! | TAGCCGAGAGTGTCCGACGG+CGG | - | chr2_3:10978138-10978157 | Msa0278090:CDS | 65.0% |
| GGTCCGCCGTCGGACACTCT+CGG | + | chr2_3:10978144-10978163 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 10974762 | 10978429 | 10974762 | ID=Msa0278090;Name=Msa0278090 |
| chr2_3 | mRNA | 10974762 | 10978429 | 10974762 | ID=Msa0278090-mRNA-1;Parent=Msa0278090;Name=Msa0278090-mRNA-1;_AED=0.04;_eAED=0.04;_QI=141|1|1|1|1|1|4|215|475 |
| chr2_3 | exon | 10974762 | 10975921 | 10974762 | ID=Msa0278090-mRNA-1:exon:4858;Parent=Msa0278090-mRNA-1 |
| chr2_3 | exon | 10977522 | 10977686 | 10977522 | ID=Msa0278090-mRNA-1:exon:4857;Parent=Msa0278090-mRNA-1 |
| chr2_3 | exon | 10977833 | 10977962 | 10977833 | ID=Msa0278090-mRNA-1:exon:4856;Parent=Msa0278090-mRNA-1 |
| chr2_3 | exon | 10978101 | 10978429 | 10978101 | ID=Msa0278090-mRNA-1:exon:4855;Parent=Msa0278090-mRNA-1 |
| chr2_3 | five_prime_UTR | 10978289 | 10978429 | 10978289 | ID=Msa0278090-mRNA-1:five_prime_utr;Parent=Msa0278090-mRNA-1 |
| chr2_3 | CDS | 10978101 | 10978288 | 10978101 | ID=Msa0278090-mRNA-1:cds;Parent=Msa0278090-mRNA-1 |
| chr2_3 | CDS | 10977833 | 10977962 | 10977833 | ID=Msa0278090-mRNA-1:cds;Parent=Msa0278090-mRNA-1 |
| chr2_3 | CDS | 10977522 | 10977686 | 10977522 | ID=Msa0278090-mRNA-1:cds;Parent=Msa0278090-mRNA-1 |
| chr2_3 | CDS | 10974977 | 10975921 | 10974977 | ID=Msa0278090-mRNA-1:cds;Parent=Msa0278090-mRNA-1 |
| chr2_3 | three_prime_UTR | 10974762 | 10974976 | 10974762 | ID=Msa0278090-mRNA-1:three_prime_utr;Parent=Msa0278090-mRNA-1 |
| Gene Sequence |
| Protein sequence |
