AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0032470

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0032470 MtrunA17_Chr1g0192631 95.873 630 8 4 207 819 1 629 0.0 1208
Msa0032470 MtrunA17_Chr1g0161161 69.853 816 165 17 11 786 25 799 0.0 953
Msa0032470 MtrunA17_Chr1g0192641 89.954 219 7 2 3 206 30 248 3.13e-111 339
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0032470 AT5G16780.3 59.951 814 261 18 45 814 28 820 0.0 818
Msa0032470 AT5G16780.1 59.951 814 261 18 45 814 28 820 0.0 818
Msa0032470 AT5G16780.2 59.951 814 261 18 45 814 28 820 0.0 818
Msa0032470 AT3G14700.1 45.775 142 57 4 616 754 80 204 5.03e-21 92.4
Msa0032470 AT3G14700.2 45.775 142 57 4 616 754 80 204 5.03e-21 92.4

Find 236 sgRNAs with CRISPR-Local

Find 828 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTTCAGGTTGAGCACTTTC+TGG 0.176468 1_1:+59626031 Msa0032470:intron
GTTCCGGAAGGGAACGTATT+AGG 0.221293 1_1:+59615965 Msa0032470:CDS
TCTTTCTTGCTCATCTTTGA+TGG 0.249425 1_1:-59621962 None:intergenic
AATATCACCATCAGCAAGTA+TGG 0.257075 1_1:-59620770 None:intergenic
GCAGCCGGATCATCATATTT+TGG 0.261898 1_1:-59621111 None:intergenic
TTGTTCTGGACGAAGTAATT+TGG 0.267374 1_1:-59622046 None:intergenic
GAAGCTGAAGCTGTCTCTTC+AGG 0.292774 1_1:+59621892 Msa0032470:CDS
TTTGGGGTGCCCGAGTTTGA+TGG 0.321687 1_1:-59626092 None:intergenic
AAAGGAAGCACCAAATAAAA+AGG 0.322540 1_1:+59623059 Msa0032470:CDS
GTGGAGAAGGAGAGAGGTTC+CGG 0.331514 1_1:+59615949 Msa0032470:CDS
TTTGAAGACCTTACTTCATC+TGG 0.332576 1_1:+59621763 Msa0032470:CDS
ACAAAGTAATGTGAGTTCTA+TGG 0.338578 1_1:-59626225 None:intergenic
TTCCGGAAGGGAACGTATTA+GGG 0.342718 1_1:+59615966 Msa0032470:CDS
TCCTCCTTGTCCTCTGAGTT+GGG 0.349750 1_1:-59622871 None:intergenic
TTAACATACGGAGATTGTTC+TGG 0.351909 1_1:-59622060 None:intergenic
TAGGGATAGGGAGAGGGATA+AGG 0.361568 1_1:+59616185 Msa0032470:CDS
ATTGAGAGGACAGATGAGTT+TGG 0.364228 1_1:+59623090 Msa0032470:CDS
AGAAAGAGCGCGAGAGGGAG+AGG 0.366243 1_1:+59616061 Msa0032470:CDS
CTCCTCCTTGTCCTCTGAGT+TGG 0.371973 1_1:-59622872 None:intergenic
ATGACCACTAAGAACAAGAT+AGG 0.372572 1_1:-59624313 None:intergenic
ATAGGGAAAGTTATAGAGAC+GGG 0.380843 1_1:+59616232 Msa0032470:CDS
ACACCCTATCTTGTTCTTAG+TGG 0.391158 1_1:+59624309 Msa0032470:CDS
TAGAGACGGGGATCGGGATA+AGG 0.391367 1_1:+59616245 Msa0032470:CDS
CAGAGATGGAAGAATTTGTC+TGG 0.392803 1_1:+59622301 Msa0032470:CDS
AGAGACGGGGATCGGGATAA+GGG 0.393058 1_1:+59616246 Msa0032470:CDS
GTCTCTTCAGGATTGGGTAT+TGG 0.393267 1_1:+59621904 Msa0032470:CDS
AAGTCAAAATCTTGATTCCT+TGG 0.397207 1_1:+59626116 Msa0032470:exon
TTGAGAGGACAGATGAGTTT+GGG 0.399880 1_1:+59623091 Msa0032470:CDS
ACCTGTTCCCGTTGAGGAAA+AGG 0.405531 1_1:+59622795 Msa0032470:CDS
AAGGTCTTCAAAGTTATTAG+TGG 0.406255 1_1:-59621752 None:intergenic
ATTCTCTCCACAGACATTGA+TGG 0.408602 1_1:-59624261 None:intergenic
TTTCAGGTTGAGCACTTTCT+GGG 0.410725 1_1:+59626032 Msa0032470:intron
TTGGGGTGCCCGAGTTTGAT+GGG 0.412564 1_1:-59626091 None:intergenic
GGAGTAAAGATGGGAAGGTA+AGG 0.416870 1_1:+59616007 Msa0032470:CDS
TCATCAACATTCTCATTACT+AGG 0.420075 1_1:-59622231 None:intergenic
ACTTAAAGAAAGTGTTGAAT+GGG 0.421632 1_1:+59622978 Msa0032470:CDS
GTCCCTAATACGTTCCCTTC+CGG 0.426137 1_1:-59615968 None:intergenic
ACGGCTAGCTCTTAAGAAAC+AGG 0.428175 1_1:+59622155 Msa0032470:CDS
AGGGATAGGGAGAGGGATAA+GGG 0.428467 1_1:+59616186 Msa0032470:CDS
AAAGATAGGTCAAGGGATAG+AGG 0.428588 1_1:+59616309 Msa0032470:CDS
CAGGAAGAGAAAGGAGCATC+TGG 0.430055 1_1:+59622174 Msa0032470:CDS
ATATGGTCAAATTCAATACT+AGG 0.431415 1_1:-59626449 None:intergenic
AAGTTATAGAGACGGGGATC+GGG 0.431832 1_1:+59616239 Msa0032470:CDS
AAGAGACAGCTTCAGCTTCA+AGG 0.432503 1_1:-59621888 None:intergenic
CAGCTCCGGAGAAGGTTAAC+TGG 0.435037 1_1:+59621724 Msa0032470:intron
AGAGGGCGCGAGAGAAGGAA+AGG 0.436650 1_1:+59616148 Msa0032470:CDS
CTCATTACTAGGATTTAAGC+TGG 0.437116 1_1:-59622220 None:intergenic
AGCGCGAGAAACATAGAGAT+AGG 0.437404 1_1:+59616214 Msa0032470:CDS
GATGAAAGAGGAAGATTCTC+AGG 0.440994 1_1:+59621250 Msa0032470:CDS
CAAAGATGAGCAAGAAAGAT+TGG 0.443784 1_1:+59621966 Msa0032470:CDS
ATTATCCGAAAGGCTTCCTT+AGG 0.449178 1_1:-59624132 None:intergenic
CTTAGTGGTCATGTTAAAGC+AGG 0.455633 1_1:+59624324 Msa0032470:CDS
AGGCTGATAGAGAGAAAGAT+AGG 0.458740 1_1:+59616295 Msa0032470:CDS
GAAGCTGTCTCTTCAGGATT+GGG 0.462236 1_1:+59621898 Msa0032470:CDS
TCTCATAAGTTCCATGGTAA+AGG 0.463591 1_1:+59624156 Msa0032470:CDS
CTCGGATACCCCATCAAACT+CGG 0.463730 1_1:+59626082 Msa0032470:CDS
CTGCTTTAGCATAAGCAGTC+TGG 0.464188 1_1:-59622014 None:intergenic
GGTTTCTGAGGATGTGGAGA+AGG 0.464685 1_1:+59615936 Msa0032470:CDS
GATAGGGAAAGTTATAGAGA+CGG 0.468286 1_1:+59616231 Msa0032470:CDS
GAGAAGGAGAGGAGTAAAGA+TGG 0.469841 1_1:+59615997 Msa0032470:CDS
ACAGTTGAGAAAGATCTTCC+TGG 0.470057 1_1:+59625325 Msa0032470:CDS
AGATAAGATTAGAGAGGAGA+GGG 0.473486 1_1:+59616272 Msa0032470:CDS
ACTTCATGTATAGTTTCATC+AGG 0.474899 1_1:-59622901 None:intergenic
GAGGGCGCGAGAGAAGGAAA+GGG 0.475256 1_1:+59616149 Msa0032470:CDS
CAGCTTATCTTTCTTCCGTA+AGG 0.475516 1_1:-59621854 None:intergenic
AGAAGACTAGGGATAGGGAG+AGG 0.476093 1_1:+59616178 Msa0032470:CDS
TGAAGCTGTCTCTTCAGGAT+TGG 0.476525 1_1:+59621897 Msa0032470:CDS
GGAAAGAGAAGACTAGGGAT+AGG 0.477142 1_1:+59616172 Msa0032470:CDS
TCTTCCTCTGCTTTAACATA+CGG 0.477570 1_1:-59622072 None:intergenic
GCTGTAGGGAAAGGACTGTC+TGG 0.478978 1_1:+59622925 Msa0032470:CDS
TAAGATTAGAGAGGAGAGGG+AGG 0.480961 1_1:+59616275 Msa0032470:CDS
AGCTAGAAACTTTAATGCCA+TGG 0.481545 1_1:+59626191 Msa0032470:three_prime_UTR
AACCACCAGTTAACCTTCTC+CGG 0.481606 1_1:-59621729 None:intergenic
CATGAGGAAGATTATGAATC+GGG 0.482629 1_1:+59616345 Msa0032470:CDS
ACTTCCAAAATATGATGATC+CGG 0.482727 1_1:+59621107 Msa0032470:CDS
ATGAAAACATCTTCACCATC+TGG 0.487004 1_1:-59622754 None:intergenic
ATGCTTGAAAATGTGGAAAT+CGG 0.489731 1_1:+59620890 Msa0032470:CDS
AAAGTTATAGAGACGGGGAT+CGG 0.490467 1_1:+59616238 Msa0032470:CDS
CAAATTCTTCCATCTCTGTA+AGG 0.491825 1_1:-59622296 None:intergenic
CACTTAAAGAAAGTGTTGAA+TGG 0.492309 1_1:+59622977 Msa0032470:CDS
TCAAGCTAAATATCCTTGCT+AGG 0.493782 1_1:+59626158 Msa0032470:three_prime_UTR
CAATGTCTGTGGAGAGAATG+AGG 0.496086 1_1:+59624265 Msa0032470:CDS
GGAGAGGAGTAAAGATGGGA+AGG 0.496359 1_1:+59616002 Msa0032470:CDS
TCATGAGGAAGATTATGAAT+CGG 0.496836 1_1:+59616344 Msa0032470:CDS
GGATTGGGTATTGGTGACCT+TGG 0.498503 1_1:+59621913 Msa0032470:CDS
CACATCCTCAGAAACCCTCT+TGG 0.499353 1_1:-59615929 None:intergenic
CATTGATATGCTTGAAAATG+TGG 0.500350 1_1:+59620883 Msa0032470:CDS
TTTATTTGGGAGTTAAATGG+TGG 0.501516 1_1:+59626419 Msa0032470:three_prime_UTR
TTGCTTCCAGTTGACTCCTA+AGG 0.501772 1_1:+59624116 Msa0032470:intron
GGATGTTGGTAAACATGAAA+AGG 0.502978 1_1:+59616410 Msa0032470:CDS
CCGAGGTAAAGACCGGGATC+AGG 0.507658 1_1:+59615906 Msa0032470:CDS
TAAAAGCCGTAAGCTTGAAA+AGG 0.508214 1_1:+59619705 Msa0032470:CDS
TTCTGGACGAAGTAATTTGG+AGG 0.508522 1_1:-59622043 None:intergenic
CAAGTAAAGCAATTGCTTGA+GGG 0.509285 1_1:-59622197 None:intergenic
AGCATAGGTGTCAAGCCTCC+AGG 0.512212 1_1:-59625343 None:intergenic
CGAGAGGGAGAGGGATAAGA+AGG 0.512644 1_1:+59616071 Msa0032470:CDS
GCTAGAAACTTTAATGCCAT+GGG 0.513704 1_1:+59626192 Msa0032470:three_prime_UTR
TGACTCCTAAGGAAGCCTTT+CGG 0.513771 1_1:+59624127 Msa0032470:CDS
AGGATCACCGAGGTAAAGAC+CGG 0.515246 1_1:+59615899 Msa0032470:CDS
GGATAGGAAGAAGAGTGATA+AGG 0.517334 1_1:+59615879 Msa0032470:CDS
AATCAATCAAGATGATAAAG+AGG 0.517912 1_1:+59616440 Msa0032470:CDS
ATACCTTTCCAGATGAAGTA+AGG 0.520565 1_1:-59621771 None:intergenic
CTTAAGAAACAGGAAGAGAA+AGG 0.520659 1_1:+59622165 Msa0032470:CDS
AGATGGGAAGGTAAGGGAGA+GGG 0.520666 1_1:+59616014 Msa0032470:CDS
CAGCAAACCTCTTCAGCAGC+CGG 0.520854 1_1:-59621126 None:intergenic
GTTGGGATTGTAGAGGATGA+CGG 0.524942 1_1:+59623036 Msa0032470:CDS
TAGTGAGAGGGCGCGAGAGA+AGG 0.527720 1_1:+59616143 Msa0032470:CDS
CAAACTAGTGACCCGAAAAG+TGG 0.527957 1_1:+59625295 Msa0032470:CDS
GAAGACTAGGGATAGGGAGA+GGG 0.529777 1_1:+59616179 Msa0032470:CDS
AAACCCTCTTGGCCTGATCC+CGG 0.530185 1_1:-59615918 None:intergenic
AGAGACAGCTTCAGCTTCAA+GGG 0.531012 1_1:-59621887 None:intergenic
GGTTTAACTTTGGATGAAAG+AGG 0.531100 1_1:+59621238 Msa0032470:CDS
AAGATGGGAAGGTAAGGGAG+AGG 0.531287 1_1:+59616013 Msa0032470:CDS
CCTATTAACAGCTCCGGAGA+AGG 0.531576 1_1:+59621716 Msa0032470:intron
AGGGCGCGAGAGAAGGAAAG+GGG 0.533361 1_1:+59616150 Msa0032470:CDS
CATGAAGTTGCTGTAGGGAA+AGG 0.534222 1_1:+59622916 Msa0032470:CDS
CCTGATCCCGGTCTTTACCT+CGG 0.536771 1_1:-59615906 None:intergenic
CAAGAGGGTTTCTGAGGATG+TGG 0.537011 1_1:+59615930 Msa0032470:CDS
ACTATACATGAAGTTGCTGT+AGG 0.537252 1_1:+59622910 Msa0032470:CDS
GCAAGTAAAGCAATTGCTTG+AGG 0.537473 1_1:-59622198 None:intergenic
TAGGGAGAGGGATAAGGGAA+AGG 0.537811 1_1:+59616191 Msa0032470:CDS
GAAAGAGCGCGAGAGGGAGA+GGG 0.538803 1_1:+59616062 Msa0032470:CDS
ATAGAGAGAAAGATAGGTCA+AGG 0.540044 1_1:+59616301 Msa0032470:CDS
ATAATTTCTCATAAGTTCCA+TGG 0.540301 1_1:+59624150 Msa0032470:CDS
GAAAGAGAGGGAGATTGAGA+AGG 0.543374 1_1:+59616119 Msa0032470:intron
TATTAGGGACGAGCGCGAGA+AGG 0.543454 1_1:+59615981 Msa0032470:CDS
ATCAATCAAGATGATAAAGA+GGG 0.543685 1_1:+59616441 Msa0032470:CDS
GGGACGAGCGCGAGAAGGAG+AGG 0.543991 1_1:+59615986 Msa0032470:CDS
GAAAGAGAAGACTAGGGATA+GGG 0.544404 1_1:+59616173 Msa0032470:CDS
GAGTAAAGATGGGAAGGTAA+GGG 0.547616 1_1:+59616008 Msa0032470:CDS
AAGATAAGATTAGAGAGGAG+AGG 0.548711 1_1:+59616271 Msa0032470:CDS
GCTACCATTGCAACCTAGCA+AGG 0.549438 1_1:-59626171 None:intergenic
GGAGGCTTGACACCTATGCT+TGG 0.551518 1_1:+59625346 Msa0032470:CDS
AGAGATGGAAGAATTTGTCT+GGG 0.551797 1_1:+59622302 Msa0032470:CDS
GAGAGGGATAAGAAGGATCG+AGG 0.552422 1_1:+59616078 Msa0032470:CDS
CTATACATGAAGTTGCTGTA+GGG 0.553754 1_1:+59622911 Msa0032470:CDS
CAAGGTGGTCCTTACAGAGA+TGG 0.558634 1_1:+59622287 Msa0032470:CDS
AAAAGGAAGACGAGGCTGGT+GGG 0.559181 1_1:+59622812 Msa0032470:CDS
AGATTGAGAAGGATAGTGAG+AGG 0.561341 1_1:+59616130 Msa0032470:CDS
AGGACCTGGCAAAATGAAGC+AGG 0.561387 1_1:+59624176 Msa0032470:CDS
GAGGAAAAGGAAGACGAGGC+TGG 0.562516 1_1:+59622808 Msa0032470:CDS
GATGATCAAAATGCTGCAGC+TGG 0.562657 1_1:+59622249 Msa0032470:CDS
TATCATACAGATCACCTGGC+GGG 0.562738 1_1:+59620676 Msa0032470:intron
AGGAAGTAGAAAGGCTCATG+AGG 0.563110 1_1:+59616329 Msa0032470:CDS
CTTACGGAAGAAAGATAAGC+TGG 0.563251 1_1:+59621855 Msa0032470:CDS
AGACCTTACTTCATCTGGAA+AGG 0.564865 1_1:+59621768 Msa0032470:CDS
GGGCGCGAGAGAAGGAAAGG+GGG 0.564872 1_1:+59616151 Msa0032470:CDS
TGATGATCCGGCTGCTGAAG+AGG 0.565468 1_1:+59621119 Msa0032470:CDS
ACCTATGCTTGGTGATCGGA+AGG 0.565500 1_1:+59625357 Msa0032470:CDS
TAGATAGGTCTAGCAGGCAT+AGG 0.565609 1_1:+59615851 Msa0032470:intron
ATGGGGTAGATAGGTCTAGC+AGG 0.565906 1_1:+59615845 Msa0032470:intron
GCGCGAGAAACATAGAGATA+GGG 0.566963 1_1:+59616215 Msa0032470:CDS
ATATCCTTGCTAGGTTGCAA+TGG 0.567752 1_1:+59626167 Msa0032470:three_prime_UTR
AAAAGGAGATTCACATTGAG+AGG 0.568087 1_1:+59623076 Msa0032470:CDS
AACAATCTGAGATTTCATCA+TGG 0.568465 1_1:+59619677 Msa0032470:CDS
AGAAGGAGAGGAGTAAAGAT+GGG 0.571494 1_1:+59615998 Msa0032470:CDS
TGGGGTCTTCACATTGATGA+AGG 0.572199 1_1:+59622321 Msa0032470:CDS
CTTATGAGAAATTATCCGAA+AGG 0.572925 1_1:-59624142 None:intergenic
TAGGACAACATCGCAGTAGA+GGG 0.574935 1_1:+59619873 Msa0032470:intron
GGGGAAAGATAAGATTAGAG+AGG 0.575422 1_1:+59616266 Msa0032470:CDS
TCAGAAGCACGTAGGCCAGA+TGG 0.575661 1_1:+59622739 Msa0032470:intron
GAAAAGAGAGACGAGGATGT+TGG 0.576723 1_1:+59616396 Msa0032470:CDS
GTCTAGCAGGCATAGGAGCA+AGG 0.577123 1_1:+59615858 Msa0032470:CDS
AAAAGCTGAACAATCAAGCT+CGG 0.579635 1_1:+59626064 Msa0032470:CDS
ATCATACAGATCACCTGGCG+GGG 0.582643 1_1:+59620677 Msa0032470:intron
CAAATTGGTTGGGATTGTAG+AGG 0.583891 1_1:+59623029 Msa0032470:CDS
ATAGAGAGAAAGAGCGCGAG+AGG 0.585070 1_1:+59616055 Msa0032470:CDS
AAGGGATAGAGGAAGTAGAA+AGG 0.586590 1_1:+59616320 Msa0032470:CDS
AAGTTCCATGGTAAAGGACC+TGG 0.587246 1_1:+59624162 Msa0032470:CDS
CTTGACAAAGTTGCGGAAGG+TGG 0.587424 1_1:+59620718 Msa0032470:CDS
CACCTTCCGCAACTTTGTCA+AGG 0.591120 1_1:-59620717 None:intergenic
TGACACCTATGCTTGGTGAT+CGG 0.591348 1_1:+59625353 Msa0032470:CDS
CTGTAAAATTGAAGACATGA+TGG 0.593811 1_1:+59626249 Msa0032470:three_prime_UTR
GAAGGAGAGAGGTTCCGGAA+GGG 0.595236 1_1:+59615954 Msa0032470:CDS
GCAGGCATAGGAGCAAGGAT+AGG 0.595960 1_1:+59615863 Msa0032470:CDS
TAGAGAGAAAGATAGGTCAA+GGG 0.596930 1_1:+59616302 Msa0032470:CDS
ATAGGACAACATCGCAGTAG+AGG 0.598772 1_1:+59619872 Msa0032470:intron
TGAATGGGGTGGCAGAAACA+TGG 0.599175 1_1:+59622993 Msa0032470:CDS
TGACCACTAAGAACAAGATA+GGG 0.600379 1_1:-59624312 None:intergenic
GCAGCCCAACTCAGAGGACA+AGG 0.600396 1_1:+59622867 Msa0032470:intron
TCATGGCCTTGACAAAGTTG+CGG 0.601477 1_1:+59620711 Msa0032470:CDS
AGCTGAAAAGAGACTTGAAG+AGG 0.601720 1_1:+59621276 Msa0032470:CDS
TGGGGTGCCCGAGTTTGATG+GGG 0.601959 1_1:-59626090 None:intergenic
AGAGGCACCTGTTCCCGTTG+AGG 0.602387 1_1:+59622789 Msa0032470:CDS
AGGAAGACGAGGCTGGTGGG+TGG 0.603415 1_1:+59622815 Msa0032470:CDS
ATATCACCATCAGCAAGTAT+GGG 0.605185 1_1:-59620769 None:intergenic
TGAATATCATACAGATCACC+TGG 0.606237 1_1:+59620672 Msa0032470:intron
GTTCAATGATGACCCCTCCT+CGG 0.607020 1_1:+59621074 Msa0032470:CDS
GAAAAGGAAGACGAGGCTGG+TGG 0.608350 1_1:+59622811 Msa0032470:CDS
GAGGATGTGGAGAAGGAGAG+AGG 0.609686 1_1:+59615943 Msa0032470:CDS
GCTGATGGTGATATTAATGA+AGG 0.610021 1_1:+59620778 Msa0032470:CDS
CTGACAGGATGAAAGAAACA+AGG 0.610836 1_1:+59619647 Msa0032470:intron
GAGACGGGGATCGGGATAAG+GGG 0.611335 1_1:+59616247 Msa0032470:CDS
GGCCTTGACAAAGTTGCGGA+AGG 0.611991 1_1:+59620715 Msa0032470:CDS
TAGAGAGAAAGAGCGCGAGA+GGG 0.612955 1_1:+59616056 Msa0032470:CDS
GATTGTAGAGGATGACGGAA+AGG 0.619258 1_1:+59623041 Msa0032470:CDS
TGGAGAGTCAAAAGAAAACA+AGG 0.619539 1_1:+59622269 Msa0032470:CDS
AGAAGGAGAGAGGTTCCGGA+AGG 0.621664 1_1:+59615953 Msa0032470:CDS
AGACCGGGATCAGGCCAAGA+GGG 0.622470 1_1:+59615915 Msa0032470:CDS
AGATACACCATCAATGTCTG+TGG 0.623227 1_1:+59624254 Msa0032470:CDS
TCAGGCCAAGAGGGTTTCTG+AGG 0.624361 1_1:+59615924 Msa0032470:CDS
TCGGATACCCCATCAAACTC+GGG 0.624838 1_1:+59626083 Msa0032470:CDS
GATCAGCCCATACTTGCTGA+TGG 0.625072 1_1:+59620763 Msa0032470:CDS
TTCGTGAGAATAGTAATCTG+AGG 0.627105 1_1:-59621794 None:intergenic
TCATACAGATCACCTGGCGG+GGG 0.629933 1_1:+59620678 Msa0032470:intron
ATCTCCGTATGTTAAAGCAG+AGG 0.631715 1_1:+59622068 Msa0032470:CDS
CGTTGAGGAAAAGGAAGACG+AGG 0.632694 1_1:+59622804 Msa0032470:CDS
GATTGAGAAGGATAGTGAGA+GGG 0.634308 1_1:+59616131 Msa0032470:CDS
TTGAAACTGCTTAAAGATCG+AGG 0.640832 1_1:+59622952 Msa0032470:CDS
TTAGTGGTCATGTTAAAGCA+GGG 0.644194 1_1:+59624325 Msa0032470:CDS
TGCTTATAATTACAAGACCA+AGG 0.648383 1_1:-59626133 None:intergenic
AATCCTTAGAGAAAGCTAGA+CGG 0.655105 1_1:+59622136 Msa0032470:intron
CAATCAAGATGATAAAGAGG+GGG 0.657564 1_1:+59616443 Msa0032470:CDS
TTTCATGCAAGATGACGAAG+AGG 0.660186 1_1:+59622771 Msa0032470:CDS
AAAGAAAGTGTTGAATGGGG+TGG 0.660707 1_1:+59622982 Msa0032470:CDS
AATGTCTGTGGAGAGAATGA+GGG 0.660859 1_1:+59624266 Msa0032470:CDS
ACCTTCCGATCACCAAGCAT+AGG 0.661707 1_1:-59625358 None:intergenic
GCCCAACTCAGAGGACAAGG+AGG 0.665613 1_1:+59622870 Msa0032470:intron
CTTAAAGAAAGTGTTGAATG+GGG 0.668377 1_1:+59622979 Msa0032470:CDS
TCAATCAAGATGATAAAGAG+GGG 0.671596 1_1:+59616442 Msa0032470:CDS
CTAGAAACTTTAATGCCATG+GGG 0.672131 1_1:+59626193 Msa0032470:three_prime_UTR
GGATCACCGAGGTAAAGACC+GGG 0.681500 1_1:+59615900 Msa0032470:CDS
TAGGGAAAGTTATAGAGACG+GGG 0.682428 1_1:+59616233 Msa0032470:CDS
CTCCGGAGAAGGTTAACTGG+TGG 0.684514 1_1:+59621727 Msa0032470:CDS
AAGACCGGGATCAGGCCAAG+AGG 0.688143 1_1:+59615914 Msa0032470:CDS
AGACGAGCAGCCCAACTCAG+AGG 0.691308 1_1:+59622861 Msa0032470:intron
GTTCTCGGAAAGATGCGAAG+AGG 0.696193 1_1:+59621935 Msa0032470:intron
GTTGAGAAAGATCTTCCTGG+AGG 0.715658 1_1:+59625328 Msa0032470:CDS
TAGAAACTTTAATGCCATGG+GGG 0.719015 1_1:+59626194 Msa0032470:three_prime_UTR
AGTAGAGGGAAGTGACGACG+AGG 0.721519 1_1:+59619887 Msa0032470:CDS
GAGATGGAAGAATTTGTCTG+GGG 0.726459 1_1:+59622303 Msa0032470:CDS
TTACCATGAAAAGAGAGACG+AGG 0.737984 1_1:+59616389 Msa0032470:CDS
ATATCATACAGATCACCTGG+CGG 0.738427 1_1:+59620675 Msa0032470:intron
GAGGATACGACACATCACAC+TGG 0.747563 1_1:+59619906 Msa0032470:CDS
AAGAGTGATAAGGATCACCG+AGG 0.771681 1_1:+59615889 Msa0032470:CDS
AGAGTCAAAAGAAAACAAGG+TGG 0.787772 1_1:+59622272 Msa0032470:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TACAAATTATAAAAAATACA+TGG - chr1_1:59619193-59619212 None:intergenic 10.0%
!!! GTATTTTTTATAATTTGTAT+TGG + chr1_1:59619194-59619213 Msa0032470:intron 10.0%
!! ATAATTTAAAAAGATATGAA+GGG - chr1_1:59619516-59619535 None:intergenic 10.0%
!!! AATTTTTCATTATTTTTGTA+TGG + chr1_1:59623799-59623818 Msa0032470:intron 10.0%
!!! ATTTTTCATTATTTTTGTAT+GGG + chr1_1:59623800-59623819 Msa0032470:intron 10.0%
!! GTAAAAATACAAAATAAAAA+AGG + chr1_1:59626302-59626321 Msa0032470:three_prime_UTR 10.0%
!!! TTTTTGTAATTGTTTTTATT+TGG + chr1_1:59626405-59626424 Msa0032470:three_prime_UTR 10.0%
!!! TTTTGTAATTGTTTTTATTT+GGG + chr1_1:59626406-59626425 Msa0032470:three_prime_UTR 10.0%
!! TTATATGATGTCTTAAATTT+GGG + chr1_1:59616721-59616740 Msa0032470:intron 15.0%
!! ATCTCCATTTAATTAATTAA+GGG - chr1_1:59617924-59617943 None:intergenic 15.0%
!! AATCTCCATTTAATTAATTA+AGG - chr1_1:59617925-59617944 None:intergenic 15.0%
!! ATTAAATGGAGATTATATAT+AGG + chr1_1:59617931-59617950 Msa0032470:intron 15.0%
!! ATTGTTAAACAGAAAAAAAA+TGG + chr1_1:59618761-59618780 Msa0032470:intron 15.0%
!! CATAATTTAAAAAGATATGA+AGG - chr1_1:59619517-59619536 None:intergenic 15.0%
!! AATATATATGTAAATCTGAT+TGG + chr1_1:59620631-59620650 Msa0032470:intron 15.0%
!! AAACTAACAAAAAATTAATG+TGG + chr1_1:59623483-59623502 Msa0032470:intron 15.0%
!!! AATGAATTTTTAATCAATGT+CGG + chr1_1:59624023-59624042 Msa0032470:intron 15.0%
!!! TTTTTTGAAAATTGTTGTTT+GGG + chr1_1:59624785-59624804 Msa0032470:intron 15.0%
!! AAAATACAGTATATTGAATA+TGG - chr1_1:59625160-59625179 None:intergenic 15.0%
!! TACTAAAACAAAATGAAATT+TGG - chr1_1:59625861-59625880 None:intergenic 15.0%
!! ACTCCTAATTATGTATTAAT+TGG + chr1_1:59616625-59616644 Msa0032470:intron 20.0%
!! CTTATATGATGTCTTAAATT+TGG + chr1_1:59616720-59616739 Msa0032470:intron 20.0%
!!! TTTTGTTCAGTCAAAATTTT+GGG - chr1_1:59617111-59617130 None:intergenic 20.0%
!!! ATTTTGTTCAGTCAAAATTT+TGG - chr1_1:59617112-59617131 None:intergenic 20.0%
!!! AAATTTTGACTGAACAAAAT+AGG + chr1_1:59617112-59617131 Msa0032470:intron 20.0%
!!! TTATGAGTTATTTTAAACCT+TGG + chr1_1:59617458-59617477 Msa0032470:intron 20.0%
!! AAAACTTAATTGCTTTACAT+TGG + chr1_1:59617486-59617505 Msa0032470:intron 20.0%
!! AAACTTAATTGCTTTACATT+GGG + chr1_1:59617487-59617506 Msa0032470:intron 20.0%
!!! TTATGAGTTATTTTAAACCT+TGG + chr1_1:59617458-59617477 Msa0032470:intron 20.0%
!! AAAACTTAATTGCTTTACAT+CGG + chr1_1:59617486-59617505 Msa0032470:intron 20.0%
!! TGCTATAAATTTCTTAGATT+AGG + chr1_1:59617802-59617821 Msa0032470:intron 20.0%
!! GCTATAAATTTCTTAGATTA+GGG + chr1_1:59617803-59617822 Msa0032470:intron 20.0%
!!! ATTTCTTTCACTCTATTTTT+TGG - chr1_1:59617856-59617875 None:intergenic 20.0%
!! GAAACCCTTAATTAATTAAA+TGG + chr1_1:59617917-59617936 Msa0032470:intron 20.0%
!!! TTTTTTTTGCTCAGATATAT+TGG - chr1_1:59618331-59618350 None:intergenic 20.0%
!! AAAAAAAAAACAGAATCTCT+GGG + chr1_1:59618343-59618362 Msa0032470:intron 20.0%
!! ATGGCTTAAATTCTTAATTA+AGG + chr1_1:59618713-59618732 Msa0032470:intron 20.0%
!! TCAATCTCATCATTAAAATT+AGG + chr1_1:59618906-59618925 Msa0032470:intron 20.0%
!!! TTTTTTTATCATCAGTCAAA+GGG - chr1_1:59619122-59619141 None:intergenic 20.0%
!!! ATTTTTTTATCATCAGTCAA+AGG - chr1_1:59619123-59619142 None:intergenic 20.0%
!! AAAAAATACATGGTTTAGTA+TGG - chr1_1:59619183-59619202 None:intergenic 20.0%
!!! CATATCTTTTTAAATTATGC+TGG + chr1_1:59619518-59619537 Msa0032470:intron 20.0%
!!! TTCTGAAACATTACATTTTT+CGG + chr1_1:59619577-59619596 Msa0032470:intron 20.0%
!! CAATATTATGTGATCTATAT+AGG + chr1_1:59619854-59619873 Msa0032470:intron 20.0%
!! CATTATTTCAATCAGAAAAA+GGG - chr1_1:59621003-59621022 None:intergenic 20.0%
!! ACATTATTTCAATCAGAAAA+AGG - chr1_1:59621004-59621023 None:intergenic 20.0%
!!! GATATCATTTTTCCATTTAA+TGG + chr1_1:59621428-59621447 Msa0032470:intron 20.0%
!! GCTAATTCAATAAAATTCTA+AGG - chr1_1:59621630-59621649 None:intergenic 20.0%
!!! ATTTTATTGAATTAGCTACA+CGG + chr1_1:59621634-59621653 Msa0032470:intron 20.0%
!! ATAGTATGAACTTCTTTATT+TGG - chr1_1:59622385-59622404 None:intergenic 20.0%
!! CTAAATATGACAAAAAAATG+AGG - chr1_1:59623145-59623164 None:intergenic 20.0%
!!! TATTTTACAATTTACTTAGC+AGG + chr1_1:59623408-59623427 Msa0032470:intron 20.0%
!! AAATTACAGTAGAATCATAA+GGG + chr1_1:59623655-59623674 Msa0032470:intron 20.0%
!! GTATACAAAAAAATTTAGTG+AGG - chr1_1:59623759-59623778 None:intergenic 20.0%
!! TCTTGTAATAGCAAAAAAAA+AGG + chr1_1:59623845-59623864 Msa0032470:intron 20.0%
!!! TTTTGTATATATTGTGTTCA+TGG + chr1_1:59623929-59623948 Msa0032470:intron 20.0%
!! TTTGTATATATTGTGTTCAT+GGG + chr1_1:59623930-59623949 Msa0032470:intron 20.0%
!! ATTGATTAAAAATTCATTGG+AGG - chr1_1:59624021-59624040 None:intergenic 20.0%
!!! GACATTGATTAAAAATTCAT+TGG - chr1_1:59624024-59624043 None:intergenic 20.0%
!!! TAATTTCAGTTTTCACATTA+TGG + chr1_1:59624059-59624078 Msa0032470:intron 20.0%
!!! ATTTGATTTAGTTAGATACT+AGG + chr1_1:59624389-59624408 Msa0032470:intron 20.0%
!!! GTTTTTTGAAAATTGTTGTT+TGG + chr1_1:59624784-59624803 Msa0032470:intron 20.0%
!!! ATTATGCTTTTCAAAATGAA+GGG - chr1_1:59625070-59625089 None:intergenic 20.0%
!!! TACTGTATTTTGCAATTTTA+TGG + chr1_1:59625169-59625188 Msa0032470:intron 20.0%
!! TAAACTAAAAACAAGGAAAA+GGG - chr1_1:59625239-59625258 None:intergenic 20.0%
!! ATAAACTAAAAACAAGGAAA+AGG - chr1_1:59625240-59625259 None:intergenic 20.0%
!!! TACTAAAACTACTTTTTTTC+CGG + chr1_1:59625456-59625475 Msa0032470:intron 20.0%
!! GTCTTGAAAAAAATATCAAA+GGG - chr1_1:59625577-59625596 None:intergenic 20.0%
!! AGTCTTGAAAAAAATATCAA+AGG - chr1_1:59625578-59625597 None:intergenic 20.0%
!!! TTGATATTTTTTTCAAGACT+AGG + chr1_1:59625578-59625597 Msa0032470:intron 20.0%
!! GTTGTTTAAATAAAAAGCAA+TGG + chr1_1:59625628-59625647 Msa0032470:intron 20.0%
!!! ATTTTGTTTTAGTAGACATT+GGG + chr1_1:59625867-59625886 Msa0032470:intron 20.0%
!! AATAAAAACATCTTAACAAC+GGG - chr1_1:59626011-59626030 None:intergenic 20.0%
!! CAATAAAAACATCTTAACAA+CGG - chr1_1:59626012-59626031 None:intergenic 20.0%
!!! TAAGATGTTTTTATTGTTTC+AGG + chr1_1:59626016-59626035 Msa0032470:intron 20.0%
!!! ATCAAGATTTTGACTTTTTT+GGG - chr1_1:59626112-59626131 None:intergenic 20.0%
!!! AATCAAGATTTTGACTTTTT+TGG - chr1_1:59626113-59626132 None:intergenic 20.0%
!!! TAACTTTTTCTAGTGATTTT+TGG + chr1_1:59626374-59626393 Msa0032470:three_prime_UTR 20.0%
! AATCAATCAAGATGATAAAG+AGG + chr1_1:59616440-59616459 Msa0032470:CDS 25.0%
! ATCAATCAAGATGATAAAGA+GGG + chr1_1:59616441-59616460 Msa0032470:CDS 25.0%
! AAGTAATGAATTACATAGCA+GGG - chr1_1:59616588-59616607 None:intergenic 25.0%
! AAAGTAATGAATTACATAGC+AGG - chr1_1:59616589-59616608 None:intergenic 25.0%
! AATTCATTACTTTATGCTTC+AGG + chr1_1:59616596-59616615 Msa0032470:intron 25.0%
! TCGCCAATTAATACATAATT+AGG - chr1_1:59616631-59616650 None:intergenic 25.0%
! AACTCTCGTTAAATTCTTAA+TGG + chr1_1:59617004-59617023 Msa0032470:intron 25.0%
! TCGTTAAATTCTTAATGGTT+TGG + chr1_1:59617009-59617028 Msa0032470:intron 25.0%
!!! AGGAATTATGGCTTATTTTA+AGG - chr1_1:59617052-59617071 None:intergenic 25.0%
!! TTTGTTCAGTCAAAATTTTG+GGG - chr1_1:59617110-59617129 None:intergenic 25.0%
!!! TACACTTTTTCCTATGTTTT+CGG - chr1_1:59617327-59617346 None:intergenic 25.0%
! TATACAAGTGATTCCTTAAA+TGG - chr1_1:59617427-59617446 None:intergenic 25.0%
!!! TACACTTTTTCCTATGTTTT+CGG - chr1_1:59617327-59617346 None:intergenic 25.0%
! TACAAGTGATTCCATTTAAA+TGG - chr1_1:59617621-59617640 None:intergenic 25.0%
! AAACTTAATTGCTTTACATC+GGG + chr1_1:59617683-59617702 Msa0032470:intron 25.0%
!!! TCTATTTTTTGGTTTGAATG+GGG - chr1_1:59617845-59617864 None:intergenic 25.0%
!!! CTCTATTTTTTGGTTTGAAT+GGG - chr1_1:59617846-59617865 None:intergenic 25.0%
!!! ACTCTATTTTTTGGTTTGAA+TGG - chr1_1:59617847-59617866 None:intergenic 25.0%
! TCAATTGTTCTTCAAAACAT+TGG - chr1_1:59617899-59617918 None:intergenic 25.0%
! CAAAAAAAAAACAGAATCTC+TGG + chr1_1:59618342-59618361 Msa0032470:intron 25.0%
!!! TGTGAATTTTGATACATTGT+AGG + chr1_1:59618445-59618464 Msa0032470:intron 25.0%
!! ATTATTAACTTGAAGTGCAA+TGG - chr1_1:59618594-59618613 None:intergenic 25.0%
!! ATTGCACTTCAAGTTAATAA+TGG + chr1_1:59618593-59618612 Msa0032470:intron 25.0%
! TAATTCTTCATTCCTTGAAT+TGG - chr1_1:59618681-59618700 None:intergenic 25.0%
! AAATGGATAAAAGATGAGAT+AGG + chr1_1:59618778-59618797 Msa0032470:intron 25.0%
! GGTACAATTAAAGCATATAT+GGG - chr1_1:59618856-59618875 None:intergenic 25.0%
! TGGTACAATTAAAGCATATA+TGG - chr1_1:59618857-59618876 None:intergenic 25.0%
!! TTATTCTATAGGTGTTACAA+TGG - chr1_1:59619045-59619064 None:intergenic 25.0%
!!! TTTTTTATCATCAGTCAAAG+GGG - chr1_1:59619121-59619140 None:intergenic 25.0%
! TCTCAAAAATCTAGAAAAGA+AGG - chr1_1:59619261-59619280 None:intergenic 25.0%
!!! ATGTTTGCACTTTTTTAAAG+AGG - chr1_1:59619344-59619363 None:intergenic 25.0%
! CCTGTCAGAAATAATAAATT+AGG - chr1_1:59619635-59619654 None:intergenic 25.0%
!!! CCTAATTTATTATTTCTGAC+AGG + chr1_1:59619632-59619651 Msa0032470:intron 25.0%
! ACAATGTTGCAACATATTAA+AGG - chr1_1:59619788-59619807 None:intergenic 25.0%
! TCCTATAAAGTTATGTGTTA+TGG + chr1_1:59619953-59619972 Msa0032470:intron 25.0%
! TCCATAACACATAACTTTAT+AGG - chr1_1:59619957-59619976 None:intergenic 25.0%
! TAATAAGGTGTATGAATAGA+AGG - chr1_1:59620004-59620023 None:intergenic 25.0%
! TTGTGAACTAACTCTTAATA+AGG - chr1_1:59620019-59620038 None:intergenic 25.0%
!! TCTAAAACATTAATAAACCG+AGG + chr1_1:59620108-59620127 Msa0032470:intron 25.0%
! ATCAATCTTACAGAATACAT+AGG - chr1_1:59620318-59620337 None:intergenic 25.0%
! TATTCTGTAAGATTGATGAA+AGG + chr1_1:59620321-59620340 Msa0032470:intron 25.0%
! CTAATAAAAATCCACGTATA+TGG + chr1_1:59620348-59620367 Msa0032470:intron 25.0%
!!! TTTTTTTGGGTTAAACAGAT+TGG + chr1_1:59620470-59620489 Msa0032470:intron 25.0%
! TTTGTAACTTAGTATGCATA+TGG + chr1_1:59620498-59620517 Msa0032470:intron 25.0%
!!! TCATCTAAGTTTTTTGTTCA+GGG + chr1_1:59621217-59621236 Msa0032470:intron 25.0%
! ACTTTACAAGAAAGTAAAGA+TGG + chr1_1:59621334-59621353 Msa0032470:intron 25.0%
! ATGCAACAATAACAACAAAA+GGG - chr1_1:59621474-59621493 None:intergenic 25.0%
! TATGCAACAATAACAACAAA+AGG - chr1_1:59621475-59621494 None:intergenic 25.0%
!! TTCCTCTTTTATTATTTGAC+TGG + chr1_1:59621679-59621698 Msa0032470:intron 25.0%
!! TCCTCTTTTATTATTTGACT+GGG + chr1_1:59621680-59621699 Msa0032470:intron 25.0%
!! ATGAACTTCTTTATTTGGAA+AGG - chr1_1:59622380-59622399 None:intergenic 25.0%
!! GTTGTATTTTATCACAAGTT+AGG + chr1_1:59622496-59622515 Msa0032470:intron 25.0%
!!! TAATCTTGTGTTACTTTAGT+TGG + chr1_1:59622637-59622656 Msa0032470:intron 25.0%
!!! ACTTAAAGAAAGTGTTGAAT+GGG + chr1_1:59622978-59622997 Msa0032470:CDS 25.0%
! GGATAAGAAAAAAAGCAAAT+TGG + chr1_1:59623014-59623033 Msa0032470:CDS 25.0%
! AAGAAAAAAAGCAAATTGGT+TGG + chr1_1:59623018-59623037 Msa0032470:CDS 25.0%
! AGAAAAAAAGCAAATTGGTT+GGG + chr1_1:59623019-59623038 Msa0032470:CDS 25.0%
!! ATGTGAATCTCCTTTTTATT+TGG - chr1_1:59623072-59623091 None:intergenic 25.0%
! AAAAATGAGGTAAACAAACA+TGG - chr1_1:59623132-59623151 None:intergenic 25.0%
! CTTTCATAAATGCAAAAATG+TGG - chr1_1:59623226-59623245 None:intergenic 25.0%
! TGCAAATAAAGTAGTAAATG+AGG + chr1_1:59623276-59623295 Msa0032470:intron 25.0%
! GCAAATAAAGTAGTAAATGA+GGG + chr1_1:59623277-59623296 Msa0032470:intron 25.0%
! ATGACTTAATAAAGTGATAC+AGG + chr1_1:59623307-59623326 Msa0032470:intron 25.0%
! AATAAAAAAGACTAACCCAT+AGG - chr1_1:59623372-59623391 None:intergenic 25.0%
!! ATTCTACTGTAATTTGTATG+TGG - chr1_1:59623650-59623669 None:intergenic 25.0%
! CAAATTACAGTAGAATCATA+AGG + chr1_1:59623654-59623673 Msa0032470:intron 25.0%
! AAAAAATTTAGTGAGGAAAG+TGG - chr1_1:59623752-59623771 None:intergenic 25.0%
!! TTTTTGTATACGAAGTAACT+TGG + chr1_1:59623768-59623787 Msa0032470:intron 25.0%
!! TTTTGTATACGAAGTAACTT+GGG + chr1_1:59623769-59623788 Msa0032470:intron 25.0%
!!! TATTTTTGTATGGGCTTTAT+AGG + chr1_1:59623809-59623828 Msa0032470:intron 25.0%
! ATAATTTCTCATAAGTTCCA+TGG + chr1_1:59624150-59624169 Msa0032470:CDS 25.0%
!! TGTGATTTTCTGATAAAAGT+TGG + chr1_1:59624427-59624446 Msa0032470:intron 25.0%
!! GTGATTTTCTGATAAAAGTT+GGG + chr1_1:59624428-59624447 Msa0032470:intron 25.0%
!! TGATTTTCTGATAAAAGTTG+GGG + chr1_1:59624429-59624448 Msa0032470:intron 25.0%
! AATCAAAAATGGGAAAAACA+AGG - chr1_1:59624684-59624703 None:intergenic 25.0%
! GCAATCTGATAATCAAAAAT+GGG - chr1_1:59624694-59624713 None:intergenic 25.0%
! AGCAATCTGATAATCAAAAA+TGG - chr1_1:59624695-59624714 None:intergenic 25.0%
!!! ATTTTTGATTATCAGATTGC+TGG + chr1_1:59624694-59624713 Msa0032470:intron 25.0%
! AAAAAACCCTACAAACTTAT+GGG - chr1_1:59624771-59624790 None:intergenic 25.0%
!!! GGGAATTTTTTTTCTCTTTT+AGG + chr1_1:59624805-59624824 Msa0032470:intron 25.0%
!! TTATGCTTTTCAAAATGAAG+GGG - chr1_1:59625069-59625088 None:intergenic 25.0%
!! CATTATGCTTTTCAAAATGA+AGG - chr1_1:59625071-59625090 None:intergenic 25.0%
!!! CTTCATTTTGAAAAGCATAA+TGG + chr1_1:59625069-59625088 Msa0032470:intron 25.0%
! CAGCATATAAACTAAAAACA+AGG - chr1_1:59625246-59625265 None:intergenic 25.0%
!!! ATTTTTTTCAAGACTAGGAT+AGG + chr1_1:59625583-59625602 Msa0032470:intron 25.0%
!!! CATTTTGTTTTAGTAGACAT+TGG + chr1_1:59625866-59625885 Msa0032470:intron 25.0%
! AGGATAATATAAAGAGATGT+TGG + chr1_1:59625891-59625910 Msa0032470:intron 25.0%
! TAAAACAATGAAATTCCCAA+TGG - chr1_1:59625919-59625938 None:intergenic 25.0%
!!! TCAAGATTTTGACTTTTTTG+GGG - chr1_1:59626111-59626130 None:intergenic 25.0%
!!! GTTTTTATTTGGGAGTTAAA+TGG + chr1_1:59626416-59626435 Msa0032470:three_prime_UTR 25.0%
! ATATGGTCAAATTCAATACT+AGG - chr1_1:59626452-59626471 None:intergenic 25.0%
!!! GTTTTTGTTGATTGGTTATA+TGG + chr1_1:59626479-59626498 Msa0032470:three_prime_UTR 25.0%
TCATGAGGAAGATTATGAAT+CGG + chr1_1:59616344-59616363 Msa0032470:CDS 30.0%
TCAATCAAGATGATAAAGAG+GGG + chr1_1:59616442-59616461 Msa0032470:CDS 30.0%
! CTGAATGCTTAGAATTTTGA+TGG + chr1_1:59616654-59616673 Msa0032470:intron 30.0%
! TCTTTTGTAGAATTCAGACA+AGG + chr1_1:59616678-59616697 Msa0032470:intron 30.0%
TCCATTTATGCCATATATCT+AGG + chr1_1:59616815-59616834 Msa0032470:intron 30.0%
ACCTAGATATATGGCATAAA+TGG - chr1_1:59616819-59616838 None:intergenic 30.0%
GTTGACATTACCTAGATATA+TGG - chr1_1:59616828-59616847 None:intergenic 30.0%
!! TCTTAATGGTTTGGACTTTT+TGG + chr1_1:59617018-59617037 Msa0032470:intron 30.0%
! TATGTTTTCGGTATCTATAG+GGG - chr1_1:59617315-59617334 None:intergenic 30.0%
! CTATGTTTTCGGTATCTATA+GGG - chr1_1:59617316-59617335 None:intergenic 30.0%
! GAAAACATAGGAAAAAGTGT+AGG + chr1_1:59617326-59617345 Msa0032470:intron 30.0%
!!! TGAGTTATTTTAAACCTTGG+AGG + chr1_1:59617461-59617480 Msa0032470:intron 30.0%
TAATTGCTTTACATTGGGTT+TGG + chr1_1:59617492-59617511 Msa0032470:intron 30.0%
! GAAAACATAGGAAAAAGTGT+AGG + chr1_1:59617326-59617345 Msa0032470:intron 30.0%
AGACAGTGATTCCATTTAAA+TGG + chr1_1:59617607-59617626 Msa0032470:intron 30.0%
!!! TGAGTTATTTTAAACCTTGG+AGG + chr1_1:59617461-59617480 Msa0032470:intron 30.0%
TAGGTTGCTATAATAGCTTA+CGG - chr1_1:59617971-59617990 None:intergenic 30.0%
AATAGAAGAGAGTAATGAGA+GGG + chr1_1:59617999-59618018 Msa0032470:intron 30.0%
TATTTAGCATTGTTATCTCC+CGG - chr1_1:59618227-59618246 None:intergenic 30.0%
! CTAGCAAATAAGAGTGTATT+TGG - chr1_1:59618290-59618309 None:intergenic 30.0%
ATATATTGGTACAACCTAGA+TGG - chr1_1:59618317-59618336 None:intergenic 30.0%
ACAATAAATCATAAGTCCCT+TGG - chr1_1:59618474-59618493 None:intergenic 30.0%
AAGGGACTTATGATTTATTG+TGG + chr1_1:59618473-59618492 Msa0032470:intron 30.0%
AGGGACTTATGATTTATTGT+GGG + chr1_1:59618474-59618493 Msa0032470:intron 30.0%
!! TTGTGGGTTTAAGATTTTCT+TGG + chr1_1:59618490-59618509 Msa0032470:intron 30.0%
!! TGTGGGTTTAAGATTTTCTT+GGG + chr1_1:59618491-59618510 Msa0032470:intron 30.0%
GATTAGTGATAGACACTAAT+TGG + chr1_1:59618516-59618535 Msa0032470:intron 30.0%
ATAGACACTAATTGGATTGA+AGG + chr1_1:59618524-59618543 Msa0032470:intron 30.0%
!! AGAATTAGCTTGGATTTTGA+TGG + chr1_1:59618694-59618713 Msa0032470:intron 30.0%
AATTAAGGTTGCTGAAGAAA+TGG + chr1_1:59618728-59618747 Msa0032470:intron 30.0%
ATGATGAGATTGATTAACTG+TGG - chr1_1:59618899-59618918 None:intergenic 30.0%
TACAGAATTAGAAATCTTCC+TGG - chr1_1:59618975-59618994 None:intergenic 30.0%
GGAAGATTTCTAATTCTGTA+AGG + chr1_1:59618975-59618994 Msa0032470:intron 30.0%
AAGATTACCTCATGATTAGA+TGG - chr1_1:59619009-59619028 None:intergenic 30.0%
ATCTAATCATGAGGTAATCT+TGG + chr1_1:59619008-59619027 Msa0032470:intron 30.0%
!!! GAGAATGGGTTTTATTCTAT+AGG - chr1_1:59619056-59619075 None:intergenic 30.0%
TAATAGTTCTCATCTTTCCT+GGG - chr1_1:59619093-59619112 None:intergenic 30.0%
TTAATAGTTCTCATCTTTCC+TGG - chr1_1:59619094-59619113 None:intergenic 30.0%
TTAAAAAGATATGAAGGGAG+AGG - chr1_1:59619511-59619530 None:intergenic 30.0%
AGAATATTGTCACAGCATAA+TGG - chr1_1:59619612-59619631 None:intergenic 30.0%
! AACAATCTGAGATTTCATCA+TGG + chr1_1:59619677-59619696 Msa0032470:CDS 30.0%
TAAGAGTTAGTTCACAAAAG+TGG + chr1_1:59620022-59620041 Msa0032470:intron 30.0%
AAGAGTTAGTTCACAAAAGT+GGG + chr1_1:59620023-59620042 Msa0032470:intron 30.0%
!! TAATGTTTTAGACAAGTGCT+AGG - chr1_1:59620100-59620119 None:intergenic 30.0%
!! TCTGTTTCTATTGTATACCT+CGG - chr1_1:59620128-59620147 None:intergenic 30.0%
TAAAACCAATAGAACACTGA+TGG - chr1_1:59620397-59620416 None:intergenic 30.0%
GTTTAACCCAAAAAAACAAC+TGG - chr1_1:59620466-59620485 None:intergenic 30.0%
!!! GACATTTTTAGTTATTCCCT+TGG + chr1_1:59620569-59620588 Msa0032470:intron 30.0%
!!! ATTTTTAGTTATTCCCTTGG+AGG + chr1_1:59620572-59620591 Msa0032470:intron 30.0%
! TTAATGAAGGTACAATTGCT+TGG + chr1_1:59620791-59620810 Msa0032470:intron 30.0%
!! TTTTCAAGCATATCAATGTC+TGG - chr1_1:59620881-59620900 None:intergenic 30.0%
CATTGATATGCTTGAAAATG+TGG + chr1_1:59620883-59620902 Msa0032470:CDS 30.0%
ATGCTTGAAAATGTGGAAAT+CGG + chr1_1:59620890-59620909 Msa0032470:CDS 30.0%
AAAGCTGCAAAAAAGAAAAC+TGG + chr1_1:59620941-59620960 Msa0032470:CDS 30.0%
TCATTGAACCTGAAATTGAT+AGG - chr1_1:59621063-59621082 None:intergenic 30.0%
ACTTCCAAAATATGATGATC+CGG + chr1_1:59621107-59621126 Msa0032470:CDS 30.0%
!! TTGCTCAATACTTTTTGCTT+TGG - chr1_1:59621173-59621192 None:intergenic 30.0%
!! AAAGCAAAAAGTATTGAGCA+AGG + chr1_1:59621172-59621191 Msa0032470:intron 30.0%
!!! CTCATCTAAGTTTTTTGTTC+AGG + chr1_1:59621216-59621235 Msa0032470:intron 30.0%
!! TTTTGTTCAGGGTTTAACTT+TGG + chr1_1:59621228-59621247 Msa0032470:intron 30.0%
! ATGGAGCTTGAATTTTTCTA+CGG + chr1_1:59621353-59621372 Msa0032470:intron 30.0%
! AGCTTTCCATGATTGATAAT+AGG + chr1_1:59621398-59621417 Msa0032470:intron 30.0%
TACTGTCCTATTATCAATCA+TGG - chr1_1:59621407-59621426 None:intergenic 30.0%
TTCATGAGGAAAAAAGTAGT+AGG - chr1_1:59621601-59621620 None:intergenic 30.0%
! CCTCTTTTATTATTTGACTG+GGG + chr1_1:59621681-59621700 Msa0032470:intron 30.0%
! CTCTTTTATTATTTGACTGG+GGG + chr1_1:59621682-59621701 Msa0032470:intron 30.0%
AAGGTCTTCAAAGTTATTAG+TGG - chr1_1:59621755-59621774 None:intergenic 30.0%
TCATCAACATTCTCATTACT+AGG - chr1_1:59622234-59622253 None:intergenic 30.0%
CTTTAGTTGGATATAACTGT+TGG + chr1_1:59622650-59622669 Msa0032470:intron 30.0%
TTGGTGTAGATAGTATATAC+AGG + chr1_1:59622669-59622688 Msa0032470:intron 30.0%
TGGTGTAGATAGTATATACA+GGG + chr1_1:59622670-59622689 Msa0032470:intron 30.0%
ACTTCATGTATAGTTTCATC+AGG - chr1_1:59622904-59622923 None:intergenic 30.0%
!! CACTTAAAGAAAGTGTTGAA+TGG + chr1_1:59622977-59622996 Msa0032470:CDS 30.0%
!! CTTAAAGAAAGTGTTGAATG+GGG + chr1_1:59622979-59622998 Msa0032470:CDS 30.0%
!! AAAGGAAGCACCAAATAAAA+AGG + chr1_1:59623059-59623078 Msa0032470:CDS 30.0%
ATTAATGTGGTAGTAGTCTA+TGG + chr1_1:59623496-59623515 Msa0032470:intron 30.0%
CTATGGAGACAAGAAATTAT+AGG + chr1_1:59623513-59623532 Msa0032470:intron 30.0%
! AACTTTTATCTAGATCCTAC+CGG + chr1_1:59623681-59623700 Msa0032470:intron 30.0%
AAAAAAGGTGATATCTGTTG+TGG + chr1_1:59623860-59623879 Msa0032470:intron 30.0%
AAGTCAAATCTTCAGACTAA+AGG - chr1_1:59623903-59623922 None:intergenic 30.0%
ATATATTGTGTTCATGGGTT+TGG + chr1_1:59623935-59623954 Msa0032470:intron 30.0%
TATATTGTGTTCATGGGTTT+GGG + chr1_1:59623936-59623955 Msa0032470:intron 30.0%
! TTTCAGTTTTCACATTATGG+TGG + chr1_1:59624062-59624081 Msa0032470:intron 30.0%
CTTATGAGAAATTATCCGAA+AGG - chr1_1:59624145-59624164 None:intergenic 30.0%
AAAGATAGTACAGTGCTTTA+AGG - chr1_1:59624508-59624527 None:intergenic 30.0%
CAAACTATGGATCACTAATA+TGG - chr1_1:59624599-59624618 None:intergenic 30.0%
CAGTAAAATGTGAAGAGATA+TGG - chr1_1:59624721-59624740 None:intergenic 30.0%
CAAAAAACCCTACAAACTTA+TGG - chr1_1:59624772-59624791 None:intergenic 30.0%
TAATGATTGGATATGTGAAC+TGG - chr1_1:59624845-59624864 None:intergenic 30.0%
ATTCAAGTAAGGTAGATGAA+TGG - chr1_1:59625018-59625037 None:intergenic 30.0%
! GTATGTGTTTGTTCTTTTGT+TGG + chr1_1:59625268-59625287 Msa0032470:intron 30.0%
!!! TAAAACTACTTTTTTTCCGG+TGG + chr1_1:59625459-59625478 Msa0032470:intron 30.0%
!!! AAAACTACTTTTTTTCCGGT+GGG + chr1_1:59625460-59625479 Msa0032470:intron 30.0%
AAATAAAAGCTTAAACCCAC+CGG - chr1_1:59625478-59625497 None:intergenic 30.0%
AAAAAGCAATGGTTTATAGC+AGG + chr1_1:59625639-59625658 Msa0032470:intron 30.0%
GTATATCATCTGAATTGGAT+TGG + chr1_1:59625661-59625680 Msa0032470:intron 30.0%
! CGAATTTTATAGAAACCCTT+CGG + chr1_1:59625699-59625718 Msa0032470:intron 30.0%
TTTCATGAAAACTTGGTATC+TGG - chr1_1:59625742-59625761 None:intergenic 30.0%
! CCTGTATTTTCATGAAAACT+TGG - chr1_1:59625749-59625768 None:intergenic 30.0%
! CCAAGTTTTCATGAAAATAC+AGG + chr1_1:59625746-59625765 Msa0032470:intron 30.0%
! AGTTTTCATGAAAATACAGG+AGG + chr1_1:59625749-59625768 Msa0032470:intron 30.0%
CTGAAACTCAAAGCAAAATA+TGG - chr1_1:59625964-59625983 None:intergenic 30.0%
AAGTCAAAATCTTGATTCCT+TGG + chr1_1:59626116-59626135 Msa0032470:exon 30.0%
TGCTTATAATTACAAGACCA+AGG - chr1_1:59626136-59626155 None:intergenic 30.0%
ACAAAGTAATGTGAGTTCTA+TGG - chr1_1:59626228-59626247 None:intergenic 30.0%
CTGTAAAATTGAAGACATGA+TGG + chr1_1:59626249-59626268 Msa0032470:three_prime_UTR 30.0%
! CTTTTCATCACTCAGTTTTA+TGG - chr1_1:59626283-59626302 None:intergenic 30.0%
!! CTTAGAATTTTGAAAGCTGT+TGG + chr1_1:59626330-59626349 Msa0032470:intron 30.0%
TAGAAAAAGTTATGTGCACT+TGG - chr1_1:59626366-59626385 None:intergenic 30.0%
TTTATTTGGGAGTTAAATGG+TGG + chr1_1:59626419-59626438 Msa0032470:three_prime_UTR 30.0%
GATAGGGAAAGTTATAGAGA+CGG + chr1_1:59616231-59616250 Msa0032470:CDS 35.0%
ATAGGGAAAGTTATAGAGAC+GGG + chr1_1:59616232-59616251 Msa0032470:CDS 35.0%
AAGATAAGATTAGAGAGGAG+AGG + chr1_1:59616271-59616290 Msa0032470:CDS 35.0%
AGATAAGATTAGAGAGGAGA+GGG + chr1_1:59616272-59616291 Msa0032470:CDS 35.0%
ATAGAGAGAAAGATAGGTCA+AGG + chr1_1:59616301-59616320 Msa0032470:CDS 35.0%
TAGAGAGAAAGATAGGTCAA+GGG + chr1_1:59616302-59616321 Msa0032470:CDS 35.0%
CATGAGGAAGATTATGAATC+GGG + chr1_1:59616345-59616364 Msa0032470:CDS 35.0%
! GGATGTTGGTAAACATGAAA+AGG + chr1_1:59616410-59616429 Msa0032470:CDS 35.0%
CAATCAAGATGATAAAGAGG+GGG + chr1_1:59616443-59616462 Msa0032470:CDS 35.0%
CCTAACAAGTCAAATTTGTG+GGG - chr1_1:59616764-59616783 None:intergenic 35.0%
GCCTAACAAGTCAAATTTGT+GGG - chr1_1:59616765-59616784 None:intergenic 35.0%
TGGCATAAATGGAGCTTATA+AGG - chr1_1:59616808-59616827 None:intergenic 35.0%
AGGTAATGTCAACACAATGA+AGG + chr1_1:59616835-59616854 Msa0032470:intron 35.0%
TAGACTACAGAGCTTAATTG+TGG - chr1_1:59616895-59616914 None:intergenic 35.0%
TTAAGCTCTGTAGTCTATAG+AGG + chr1_1:59616898-59616917 Msa0032470:intron 35.0%
GGTGAAATGACCAAAATAGA+GGG - chr1_1:59617089-59617108 None:intergenic 35.0%
GACACTAGAAATTCACATGA+AGG - chr1_1:59617236-59617255 None:intergenic 35.0%
TGCTTCAAAGTGATTGTTTC+CGG - chr1_1:59617269-59617288 None:intergenic 35.0%
! CCTATGTTTTCGGTATCTAT+AGG - chr1_1:59617317-59617336 None:intergenic 35.0%
CCTATAGATACCGAAAACAT+AGG + chr1_1:59617314-59617333 Msa0032470:intron 35.0%
! AACATAGGAAAAAGTGTAGG+AGG + chr1_1:59617329-59617348 Msa0032470:intron 35.0%
!! CAATTAAGTTTTAGCCTCCA+AGG - chr1_1:59617478-59617497 None:intergenic 35.0%
! AACATAGGAAAAAGTGTAGG+AGG + chr1_1:59617329-59617348 Msa0032470:intron 35.0%
!! CAATTAAGTTTTAGCCTCCA+AGG - chr1_1:59617478-59617497 None:intergenic 35.0%
TAATTGCTTTACATCGGGTT+TGG + chr1_1:59617688-59617707 Msa0032470:intron 35.0%
TTTACATCGGGTTTGGATAT+TGG + chr1_1:59617695-59617714 Msa0032470:intron 35.0%
TCTCTTCTATTGATGTGTGT+AGG - chr1_1:59617990-59618009 None:intergenic 35.0%
CAATAGAAGAGAGTAATGAG+AGG + chr1_1:59617998-59618017 Msa0032470:intron 35.0%
ATAGAAGAGAGTAATGAGAG+GGG + chr1_1:59618000-59618019 Msa0032470:intron 35.0%
GAAATCGGTGACTGAATTAA+GGG + chr1_1:59618043-59618062 Msa0032470:intron 35.0%
CAAAAACACTAGCATGATAG+CGG - chr1_1:59618190-59618209 None:intergenic 35.0%
! GCTATCATGCTAGTGTTTTT+GGG + chr1_1:59618189-59618208 Msa0032470:intron 35.0%
!! CTATCATGCTAGTGTTTTTG+GGG + chr1_1:59618190-59618209 Msa0032470:intron 35.0%
AGTGTATTTGGCATTTCAGT+GGG - chr1_1:59618278-59618297 None:intergenic 35.0%
! TATTTGCTAGTAAGCCATCT+AGG + chr1_1:59618300-59618319 Msa0032470:intron 35.0%
TATTCACCCACACATATACT+CGG - chr1_1:59618560-59618579 None:intergenic 35.0%
! CACTTCAAGTTAATAATGGC+TGG + chr1_1:59618597-59618616 Msa0032470:intron 35.0%
TCAAGTTAATAATGGCTGGT+TGG + chr1_1:59618601-59618620 Msa0032470:intron 35.0%
! AATTTGCTTCGATGTGTTTC+AGG + chr1_1:59618654-59618673 Msa0032470:intron 35.0%
CAAGGAATGAAGAATTAGCT+TGG + chr1_1:59618684-59618703 Msa0032470:intron 35.0%
CTGGAACAATGAGTTAGAAT+AGG - chr1_1:59618956-59618975 None:intergenic 35.0%
CTATTCTAACTCATTGTTCC+AGG + chr1_1:59618954-59618973 Msa0032470:intron 35.0%
TGCAAATCCATCTAATCATG+AGG + chr1_1:59618999-59619018 Msa0032470:intron 35.0%
! ATGGGTGTATTTTCTTTGGA+GGG - chr1_1:59619372-59619391 None:intergenic 35.0%
ACTTCCCCCATTTATTTAGA+GGG - chr1_1:59619412-59619431 None:intergenic 35.0%
TACTTCCCCCATTTATTTAG+AGG - chr1_1:59619413-59619432 None:intergenic 35.0%
TCTAAATAAATGGGGGAAGT+AGG + chr1_1:59619412-59619431 Msa0032470:intron 35.0%
CTAAATAAATGGGGGAAGTA+GGG + chr1_1:59619413-59619432 Msa0032470:intron 35.0%
TAAATAAATGGGGGAAGTAG+GGG + chr1_1:59619414-59619433 Msa0032470:intron 35.0%
TAAAAGCCGTAAGCTTGAAA+AGG + chr1_1:59619705-59619724 Msa0032470:CDS 35.0%
!! CTCTTTCCTTTTCAAGCTTA+CGG - chr1_1:59619714-59619733 None:intergenic 35.0%
TAAGGTGTATGAATAGAAGG+CGG - chr1_1:59620001-59620020 None:intergenic 35.0%
TGTATAAGCTTCAGTTTGTG+AGG - chr1_1:59620057-59620076 None:intergenic 35.0%
AACTTAAGCTGTTACAGCTT+GGG - chr1_1:59620275-59620294 None:intergenic 35.0%
TAACTTAAGCTGTTACAGCT+TGG - chr1_1:59620276-59620295 None:intergenic 35.0%
GTTACAAACTTCCATATACG+TGG - chr1_1:59620362-59620381 None:intergenic 35.0%
TGTAACCATCAGTGTTCTAT+TGG + chr1_1:59620389-59620408 Msa0032470:intron 35.0%
!!! CAGTGTTCTATTGGTTTTAC+TGG + chr1_1:59620398-59620417 Msa0032470:intron 35.0%
!!! TCTGCAACCAGTTGTTTTTT+TGG + chr1_1:59620456-59620475 Msa0032470:intron 35.0%
!!! CTGCAACCAGTTGTTTTTTT+GGG + chr1_1:59620457-59620476 Msa0032470:intron 35.0%
AGTGCTATAAGCTATAACGT+TGG - chr1_1:59620526-59620545 None:intergenic 35.0%
AACAGATTCTTAACCTCCAA+GGG - chr1_1:59620588-59620607 None:intergenic 35.0%
AAACAGATTCTTAACCTCCA+AGG - chr1_1:59620589-59620608 None:intergenic 35.0%
TGAATATCATACAGATCACC+TGG + chr1_1:59620672-59620691 Msa0032470:intron 35.0%
ATATCACCATCAGCAAGTAT+GGG - chr1_1:59620772-59620791 None:intergenic 35.0%
AATATCACCATCAGCAAGTA+TGG - chr1_1:59620773-59620792 None:intergenic 35.0%
! GCTGATGGTGATATTAATGA+AGG + chr1_1:59620778-59620797 Msa0032470:CDS 35.0%
AAATCGGAGAACAAAAACGT+CGG + chr1_1:59620906-59620925 Msa0032470:CDS 35.0%
GAAGTATGCCTATCAATTTC+AGG + chr1_1:59621052-59621071 Msa0032470:intron 35.0%
! AGTATTTTCTTTTCCGAGGA+GGG - chr1_1:59621090-59621109 None:intergenic 35.0%
! AAGTATTTTCTTTTCCGAGG+AGG - chr1_1:59621091-59621110 None:intergenic 35.0%
!!! TGGAAGTATTTTCTTTTCCG+AGG - chr1_1:59621094-59621113 None:intergenic 35.0%
! GGTTTAACTTTGGATGAAAG+AGG + chr1_1:59621238-59621257 Msa0032470:CDS 35.0%
CTACGGATATGAAATTTCCA+TGG + chr1_1:59621370-59621389 Msa0032470:intron 35.0%
! CATTTAATGGATCCTGCATA+GGG + chr1_1:59621441-59621460 Msa0032470:intron 35.0%
! ATTTAATGGATCCTGCATAG+GGG + chr1_1:59621442-59621461 Msa0032470:intron 35.0%
! TTCTAAGGAGCAATTTCATG+AGG - chr1_1:59621615-59621634 None:intergenic 35.0%
CCCCAGTCAAATAATAAAAG+AGG - chr1_1:59621684-59621703 None:intergenic 35.0%
! TCTTTTCCTATTAACAGCTC+CGG + chr1_1:59621710-59621729 Msa0032470:intron 35.0%
TTTGAAGACCTTACTTCATC+TGG + chr1_1:59621763-59621782 Msa0032470:CDS 35.0%
ATACCTTTCCAGATGAAGTA+AGG - chr1_1:59621774-59621793 None:intergenic 35.0%
TTCGTGAGAATAGTAATCTG+AGG - chr1_1:59621797-59621816 None:intergenic 35.0%
!! CGTAAGGACTTTTTCTTCTT+GGG - chr1_1:59621841-59621860 None:intergenic 35.0%
CCAAGAAGAAAAAGTCCTTA+CGG + chr1_1:59621839-59621858 Msa0032470:CDS 35.0%
TCTTTCTTGCTCATCTTTGA+TGG - chr1_1:59621965-59621984 None:intergenic 35.0%
CAAAGATGAGCAAGAAAGAT+TGG + chr1_1:59621966-59621985 Msa0032470:CDS 35.0%
! TTGTTCTGGACGAAGTAATT+TGG - chr1_1:59622049-59622068 None:intergenic 35.0%
TTAACATACGGAGATTGTTC+TGG - chr1_1:59622063-59622082 None:intergenic 35.0%
TCTTCCTCTGCTTTAACATA+CGG - chr1_1:59622075-59622094 None:intergenic 35.0%
AATCCTTAGAGAAAGCTAGA+CGG + chr1_1:59622136-59622155 Msa0032470:intron 35.0%
CTTAAGAAACAGGAAGAGAA+AGG + chr1_1:59622165-59622184 Msa0032470:CDS 35.0%
CAAGTAAAGCAATTGCTTGA+GGG - chr1_1:59622200-59622219 None:intergenic 35.0%
CTCATTACTAGGATTTAAGC+TGG - chr1_1:59622223-59622242 None:intergenic 35.0%
TGGAGAGTCAAAAGAAAACA+AGG + chr1_1:59622269-59622288 Msa0032470:CDS 35.0%
AGAGTCAAAAGAAAACAAGG+TGG + chr1_1:59622272-59622291 Msa0032470:CDS 35.0%
CAAATTCTTCCATCTCTGTA+AGG - chr1_1:59622299-59622318 None:intergenic 35.0%
AGAGATGGAAGAATTTGTCT+GGG + chr1_1:59622302-59622321 Msa0032470:CDS 35.0%
ACTTCGCACATCTATTTCAA+TGG + chr1_1:59622592-59622611 Msa0032470:intron 35.0%
GGTGTAGATAGTATATACAG+GGG + chr1_1:59622671-59622690 Msa0032470:intron 35.0%
!! TCTATTTTTCAGAAGCACGT+AGG + chr1_1:59622731-59622750 Msa0032470:intron 35.0%
ATGAAAACATCTTCACCATC+TGG - chr1_1:59622757-59622776 None:intergenic 35.0%
ACTATACATGAAGTTGCTGT+AGG + chr1_1:59622910-59622929 Msa0032470:CDS 35.0%
CTATACATGAAGTTGCTGTA+GGG + chr1_1:59622911-59622930 Msa0032470:CDS 35.0%
TTGAAACTGCTTAAAGATCG+AGG + chr1_1:59622952-59622971 Msa0032470:CDS 35.0%
AAAAGGAGATTCACATTGAG+AGG + chr1_1:59623076-59623095 Msa0032470:CDS 35.0%
GAAAGACCATTCAAAGACAT+AGG + chr1_1:59623241-59623260 Msa0032470:intron 35.0%
TGAATGGGGTAATTACCTAT+GGG + chr1_1:59623354-59623373 Msa0032470:intron 35.0%
GCAAGAGGATAATTCAATCA+AGG - chr1_1:59623612-59623631 None:intergenic 35.0%
ATTATCCTCTTGCAAATGCA+TGG + chr1_1:59623619-59623638 Msa0032470:intron 35.0%
ATATTGTGTTCATGGGTTTG+GGG + chr1_1:59623937-59623956 Msa0032470:intron 35.0%
ACAAAAGAACAAGGTAACCA+AGG - chr1_1:59624097-59624116 None:intergenic 35.0%
TCTCATAAGTTCCATGGTAA+AGG + chr1_1:59624156-59624175 Msa0032470:CDS 35.0%
TGACCACTAAGAACAAGATA+GGG - chr1_1:59624315-59624334 None:intergenic 35.0%
ATGACCACTAAGAACAAGAT+AGG - chr1_1:59624316-59624335 None:intergenic 35.0%
TTAGTGGTCATGTTAAAGCA+GGG + chr1_1:59624325-59624344 Msa0032470:CDS 35.0%
GGAGGATAGAAAATAGTCTT+TGG - chr1_1:59624487-59624506 None:intergenic 35.0%
TTTAGTCCAAAACGTTGACA+TGG - chr1_1:59624535-59624554 None:intergenic 35.0%
ACTTCTTCCCATAAGTTTGT+AGG + chr1_1:59624761-59624780 Msa0032470:intron 35.0%
CTTCTTCCCATAAGTTTGTA+GGG + chr1_1:59624762-59624781 Msa0032470:intron 35.0%
CAATCATTAATGCCGATAAG+CGG + chr1_1:59624856-59624875 Msa0032470:intron 35.0%
TCTACCTTACTTGAATCCTA+TGG + chr1_1:59625022-59625041 Msa0032470:intron 35.0%
GAAACCATAGGATTCAAGTA+AGG - chr1_1:59625029-59625048 None:intergenic 35.0%
AAAATGAAGGGGAGAGATAA+AGG - chr1_1:59625058-59625077 None:intergenic 35.0%
! ATGGAACGTGTCTTTTATGT+TGG + chr1_1:59625088-59625107 Msa0032470:intron 35.0%
! TTACCAACATAGTGCTGTTA+CGG - chr1_1:59625120-59625139 None:intergenic 35.0%
TAAAAACAAGGAAAAGGGAG+AGG - chr1_1:59625234-59625253 None:intergenic 35.0%
!! ACTGTAGCAAAACCACTTTT+CGG - chr1_1:59625310-59625329 None:intergenic 35.0%
ATAAGTTGTTCCAACTTCTG+AGG + chr1_1:59625429-59625448 Msa0032470:intron 35.0%
TTAGTACTTTCCTCAGAAGT+TGG - chr1_1:59625442-59625461 None:intergenic 35.0%
!! TTTTCAAGACTAGGATAGGA+AGG + chr1_1:59625587-59625606 Msa0032470:intron 35.0%
AGCAGGTATATCATCTGAAT+TGG + chr1_1:59625656-59625675 Msa0032470:intron 35.0%
ATGACCACTAGACTAAAAAC+GGG - chr1_1:59625809-59625828 None:intergenic 35.0%
GATGACCACTAGACTAAAAA+CGG - chr1_1:59625810-59625829 None:intergenic 35.0%
!!! TGTTTTAGTAGACATTGGGA+AGG + chr1_1:59625871-59625890 Msa0032470:intron 35.0%
AAAAGCTGAACAATCAAGCT+CGG + chr1_1:59626064-59626083 Msa0032470:CDS 35.0%
TCAAGCTAAATATCCTTGCT+AGG + chr1_1:59626158-59626177 Msa0032470:three_prime_UTR 35.0%
AGCTAGAAACTTTAATGCCA+TGG + chr1_1:59626191-59626210 Msa0032470:three_prime_UTR 35.0%
GCTAGAAACTTTAATGCCAT+GGG + chr1_1:59626192-59626211 Msa0032470:three_prime_UTR 35.0%
CTAGAAACTTTAATGCCATG+GGG + chr1_1:59626193-59626212 Msa0032470:three_prime_UTR 35.0%
TAGAAACTTTAATGCCATGG+GGG + chr1_1:59626194-59626213 Msa0032470:three_prime_UTR 35.0%
!! AATTTTGAAAGCTGTTGGAG+TGG + chr1_1:59626335-59626354 Msa0032470:intron 35.0%
CAACAAAAACATCGCTCATA+TGG - chr1_1:59626469-59626488 None:intergenic 35.0%
!! TGAGCGATGTTTTTGTTGAT+TGG + chr1_1:59626471-59626490 Msa0032470:three_prime_UTR 35.0%
GGATAGGAAGAAGAGTGATA+AGG + chr1_1:59615879-59615898 Msa0032470:CDS 40.0%
AGAAGGAGAGGAGTAAAGAT+GGG + chr1_1:59615998-59616017 Msa0032470:CDS 40.0%
GAGTAAAGATGGGAAGGTAA+GGG + chr1_1:59616008-59616027 Msa0032470:CDS 40.0%
AGATTGAGAAGGATAGTGAG+AGG + chr1_1:59616130-59616149 Msa0032470:CDS 40.0%
GATTGAGAAGGATAGTGAGA+GGG + chr1_1:59616131-59616150 Msa0032470:CDS 40.0%
GAAAGAGAAGACTAGGGATA+GGG + chr1_1:59616173-59616192 Msa0032470:CDS 40.0%
TAGGGAAAGTTATAGAGACG+GGG + chr1_1:59616233-59616252 Msa0032470:CDS 40.0%
AAAGTTATAGAGACGGGGAT+CGG + chr1_1:59616238-59616257 Msa0032470:CDS 40.0%
GGGGAAAGATAAGATTAGAG+AGG + chr1_1:59616266-59616285 Msa0032470:CDS 40.0%
AGGCTGATAGAGAGAAAGAT+AGG + chr1_1:59616295-59616314 Msa0032470:CDS 40.0%
AAAGATAGGTCAAGGGATAG+AGG + chr1_1:59616309-59616328 Msa0032470:CDS 40.0%
AAGGGATAGAGGAAGTAGAA+AGG + chr1_1:59616320-59616339 Msa0032470:CDS 40.0%
TTACCATGAAAAGAGAGACG+AGG + chr1_1:59616389-59616408 Msa0032470:CDS 40.0%
CAAGTCAAATTTGTGGGGAT+GGG - chr1_1:59616759-59616778 None:intergenic 40.0%
ACAAGTCAAATTTGTGGGGA+TGG - chr1_1:59616760-59616779 None:intergenic 40.0%
!! CCCCACAAATTTGACTTGTT+AGG + chr1_1:59616761-59616780 Msa0032470:intron 40.0%
CGCCTAACAAGTCAAATTTG+TGG - chr1_1:59616766-59616785 None:intergenic 40.0%
!! CAAATTTGACTTGTTAGGCG+AGG + chr1_1:59616766-59616785 Msa0032470:intron 40.0%
! TGTCAACACAATGAAGGTGT+TGG + chr1_1:59616841-59616860 Msa0032470:intron 40.0%
GAGCTTAATTGTGGCAACTT+TGG - chr1_1:59616886-59616905 None:intergenic 40.0%
AAAATAGAGGGAATGCCTAG+AGG - chr1_1:59617077-59617096 None:intergenic 40.0%
! TCTAGGCATTCCCTCTATTT+TGG + chr1_1:59617076-59617095 Msa0032470:intron 40.0%
GGGTGAAATGACCAAAATAG+AGG - chr1_1:59617090-59617109 None:intergenic 40.0%
AAAAGCCACACAAGGTGAAA+GGG - chr1_1:59617182-59617201 None:intergenic 40.0%
AAAAAGCCACACAAGGTGAA+AGG - chr1_1:59617183-59617202 None:intergenic 40.0%
TCAAAGTGATTGTTTCCGGA+GGG - chr1_1:59617265-59617284 None:intergenic 40.0%
TTCAAAGTGATTGTTTCCGG+AGG - chr1_1:59617266-59617285 None:intergenic 40.0%
GGTTTGGATACCGAAAACAT+AGG + chr1_1:59617508-59617527 Msa0032470:intron 40.0%
GGTGTTTCAGTCATCGAAAT+CGG + chr1_1:59618028-59618047 Msa0032470:intron 40.0%
CGAAATCGGTGACTGAATTA+AGG + chr1_1:59618042-59618061 Msa0032470:intron 40.0%
TGAATTAAGGGCTTAGGAGT+TGG + chr1_1:59618055-59618074 Msa0032470:intron 40.0%
!!! CTTAGTTTTTTCTCCTTGCC+AGG - chr1_1:59618091-59618110 None:intergenic 40.0%
! CGCTATCATGCTAGTGTTTT+TGG + chr1_1:59618188-59618207 Msa0032470:intron 40.0%
GAGTGTATTTGGCATTTCAG+TGG - chr1_1:59618279-59618298 None:intergenic 40.0%
TGATACATTGTAGGTTGCCA+AGG + chr1_1:59618454-59618473 Msa0032470:intron 40.0%
GATACATTGTAGGTTGCCAA+GGG + chr1_1:59618455-59618474 Msa0032470:intron 40.0%
!! GGGTTTAAGATTTTCTTGGG+TGG + chr1_1:59618494-59618513 Msa0032470:intron 40.0%
AGCAAATTCCTTACACTTGC+AGG - chr1_1:59618642-59618661 None:intergenic 40.0%
TGTGTTTCAGGACCAATTCA+AGG + chr1_1:59618666-59618685 Msa0032470:intron 40.0%
GTTGCTGAAGAAATGGAATC+TGG + chr1_1:59618735-59618754 Msa0032470:intron 40.0%
ACCTTGAGTTTACACTTAGC+TGG + chr1_1:59618807-59618826 Msa0032470:intron 40.0%
CCTTGAGTTTACACTTAGCT+GGG + chr1_1:59618808-59618827 Msa0032470:intron 40.0%
CATATATGGGTGATGCCTAA+GGG - chr1_1:59618843-59618862 None:intergenic 40.0%
GTGTTTGCTTCTTGGTTTAG+TGG - chr1_1:59618877-59618896 None:intergenic 40.0%
TAACTGTGGTGTTTGCTTCT+TGG - chr1_1:59618885-59618904 None:intergenic 40.0%
CTTTCGTTGTACTCGAGAAT+GGG - chr1_1:59619070-59619089 None:intergenic 40.0%
CTTTACTCAGAAGCGAGAAA+AGG - chr1_1:59619227-59619246 None:intergenic 40.0%
! GATGGGTGTATTTTCTTTGG+AGG - chr1_1:59619373-59619392 None:intergenic 40.0%
ACATCCCCCCTCTAAATAAA+TGG + chr1_1:59619402-59619421 Msa0032470:intron 40.0%
CATCCCCCCTCTAAATAAAT+GGG + chr1_1:59619403-59619422 Msa0032470:intron 40.0%
ATCCCCCCTCTAAATAAATG+GGG + chr1_1:59619404-59619423 Msa0032470:intron 40.0%
TTCCCCCATTTATTTAGAGG+GGG - chr1_1:59619410-59619429 None:intergenic 40.0%
CTTCCCCCATTTATTTAGAG+GGG - chr1_1:59619411-59619430 None:intergenic 40.0%
TATGAAGGGAGAGGAAATTG+AGG - chr1_1:59619502-59619521 None:intergenic 40.0%
CTGACAGGATGAAAGAAACA+AGG + chr1_1:59619647-59619666 Msa0032470:intron 40.0%
!! ATGGAATTTCTGAAGTCTCG+AGG + chr1_1:59619972-59619991 Msa0032470:intron 40.0%
! AATAGTCACTCACTAGTCTC+TGG - chr1_1:59620233-59620252 None:intergenic 40.0%
!!! TCTATTGGTTTTACTGGCTC+TGG + chr1_1:59620404-59620423 Msa0032470:intron 40.0%
TGACAATGAACCCGTTAAAC+AGG - chr1_1:59620431-59620450 None:intergenic 40.0%
!! TTTAACGGGTTCATTGTCAC+TGG + chr1_1:59620432-59620451 Msa0032470:intron 40.0%
ATATCATACAGATCACCTGG+CGG + chr1_1:59620675-59620694 Msa0032470:intron 40.0%
AATCGGAGAACAAAAACGTC+GGG + chr1_1:59620907-59620926 Msa0032470:CDS 40.0%
! GTATTTTCTTTTCCGAGGAG+GGG - chr1_1:59621089-59621108 None:intergenic 40.0%
GATGAAAGAGGAAGATTCTC+AGG + chr1_1:59621250-59621269 Msa0032470:CDS 40.0%
AGCTGAAAAGAGACTTGAAG+AGG + chr1_1:59621276-59621295 Msa0032470:CDS 40.0%
AAAAGAGACTTGAAGAGGTC+AGG + chr1_1:59621281-59621300 Msa0032470:intron 40.0%
CCTATGCAGGATCCATTAAA+TGG - chr1_1:59621443-59621462 None:intergenic 40.0%
! CCATTTAATGGATCCTGCAT+AGG + chr1_1:59621440-59621459 Msa0032470:intron 40.0%
! TTTAATGGATCCTGCATAGG+GGG + chr1_1:59621443-59621462 Msa0032470:intron 40.0%
GCAATCAATGTTCTGATCAC+AGG - chr1_1:59621503-59621522 None:intergenic 40.0%
AGACCTTACTTCATCTGGAA+AGG + chr1_1:59621768-59621787 Msa0032470:CDS 40.0%
!! CCGTAAGGACTTTTTCTTCT+TGG - chr1_1:59621842-59621861 None:intergenic 40.0%
CAGCTTATCTTTCTTCCGTA+AGG - chr1_1:59621857-59621876 None:intergenic 40.0%
CTTACGGAAGAAAGATAAGC+TGG + chr1_1:59621855-59621874 Msa0032470:CDS 40.0%
TTCTGGACGAAGTAATTTGG+AGG - chr1_1:59622046-59622065 None:intergenic 40.0%
ATCTCCGTATGTTAAAGCAG+AGG + chr1_1:59622068-59622087 Msa0032470:CDS 40.0%
TCGTCATCATCTGCAAAAAC+TGG - chr1_1:59622105-59622124 None:intergenic 40.0%
!! AGTTTTTGCAGATGATGACG+AGG + chr1_1:59622104-59622123 Msa0032470:CDS 40.0%
GCAAGTAAAGCAATTGCTTG+AGG - chr1_1:59622201-59622220 None:intergenic 40.0%
CAGAGATGGAAGAATTTGTC+TGG + chr1_1:59622301-59622320 Msa0032470:CDS 40.0%
GAGATGGAAGAATTTGTCTG+GGG + chr1_1:59622303-59622322 Msa0032470:CDS 40.0%
ACACTTCTTTGTAAGCTAGC+AGG + chr1_1:59622468-59622487 Msa0032470:intron 40.0%
GCACATCTATTTCAATGGCA+CGG + chr1_1:59622597-59622616 Msa0032470:intron 40.0%
TTTCATGCAAGATGACGAAG+AGG + chr1_1:59622771-59622790 Msa0032470:CDS 40.0%
!! AAAGAAAGTGTTGAATGGGG+TGG + chr1_1:59622982-59623001 Msa0032470:CDS 40.0%
CAAATTGGTTGGGATTGTAG+AGG + chr1_1:59623029-59623048 Msa0032470:CDS 40.0%
ATTGAGAGGACAGATGAGTT+TGG + chr1_1:59623090-59623109 Msa0032470:CDS 40.0%
TTGAGAGGACAGATGAGTTT+GGG + chr1_1:59623091-59623110 Msa0032470:CDS 40.0%
ACCATTCAAAGACATAGGCT+GGG + chr1_1:59623246-59623265 Msa0032470:intron 40.0%
AGCACCTAAACTCAACTGAA+TGG + chr1_1:59623338-59623357 Msa0032470:intron 40.0%
GCACCTAAACTCAACTGAAT+GGG + chr1_1:59623339-59623358 Msa0032470:intron 40.0%
CACCTAAACTCAACTGAATG+GGG + chr1_1:59623340-59623359 Msa0032470:intron 40.0%
TACCCCATTCAGTTGAGTTT+AGG - chr1_1:59623345-59623364 None:intergenic 40.0%
CTGAATGGGGTAATTACCTA+TGG + chr1_1:59623353-59623372 Msa0032470:intron 40.0%
TTTACTTAGCAGGCATGCAT+AGG + chr1_1:59623418-59623437 Msa0032470:intron 40.0%
!! CAACAGTTCAAGTTGTTGTG+TGG + chr1_1:59623566-59623585 Msa0032470:intron 40.0%
CATTACCATGCATTTGCAAG+AGG - chr1_1:59623627-59623646 None:intergenic 40.0%
AGGTGATATCTGTTGTGGTT+TGG + chr1_1:59623865-59623884 Msa0032470:intron 40.0%
TATTGTGTTCATGGGTTTGG+GGG + chr1_1:59623938-59623957 Msa0032470:intron 40.0%
! TATGGTGGAATTCTCATCCT+TGG + chr1_1:59624077-59624096 Msa0032470:intron 40.0%
CTGGAAGCAACAAAAGAACA+AGG - chr1_1:59624106-59624125 None:intergenic 40.0%
ATTATCCGAAAGGCTTCCTT+AGG - chr1_1:59624135-59624154 None:intergenic 40.0%
! TTTTCCTGCTTCATTTTGCC+AGG - chr1_1:59624183-59624202 None:intergenic 40.0%
AGATACACCATCAATGTCTG+TGG + chr1_1:59624254-59624273 Msa0032470:CDS 40.0%
ATTCTCTCCACAGACATTGA+TGG - chr1_1:59624264-59624283 None:intergenic 40.0%
AATGTCTGTGGAGAGAATGA+GGG + chr1_1:59624266-59624285 Msa0032470:CDS 40.0%
ACACCCTATCTTGTTCTTAG+TGG + chr1_1:59624309-59624328 Msa0032470:CDS 40.0%
CTTAGTGGTCATGTTAAAGC+AGG + chr1_1:59624324-59624343 Msa0032470:CDS 40.0%
TTGGGGCTGAAATACTAATG+AGG + chr1_1:59624446-59624465 Msa0032470:intron 40.0%
TGGGGCTGAAATACTAATGA+GGG + chr1_1:59624447-59624466 Msa0032470:intron 40.0%
!! GATAGTACAGTGCTTTAAGG+AGG - chr1_1:59624505-59624524 None:intergenic 40.0%
! TTCCATCCATGTCAACGTTT+TGG + chr1_1:59624526-59624545 Msa0032470:intron 40.0%
CGCTTATCGGCATTAATGAT+TGG - chr1_1:59624858-59624877 None:intergenic 40.0%
GAACACAACATACCGCTTAT+CGG - chr1_1:59624871-59624890 None:intergenic 40.0%
AGCGGTTATTCTTGATGTTG+TGG - chr1_1:59624905-59624924 None:intergenic 40.0%
TAAAGGCAGATGGAAACCAT+AGG - chr1_1:59625041-59625060 None:intergenic 40.0%
!! CTGTAGCAAAACCACTTTTC+GGG - chr1_1:59625309-59625328 None:intergenic 40.0%
ACAGTTGAGAAAGATCTTCC+TGG + chr1_1:59625325-59625344 Msa0032470:CDS 40.0%
! TTGGTGATCGGAAGGTAATT+TGG + chr1_1:59625365-59625384 Msa0032470:intron 40.0%
GATCGGAAGGTAATTTGGAT+AGG + chr1_1:59625370-59625389 Msa0032470:intron 40.0%
AAGACTAGGATAGGAAGGAT+TGG + chr1_1:59625592-59625611 Msa0032470:intron 40.0%
!! GATAGGAAGGATTGGTCAAT+AGG + chr1_1:59625600-59625619 Msa0032470:intron 40.0%
TAAAGAGATGTTGGCACCAT+TGG + chr1_1:59625900-59625919 Msa0032470:intron 40.0%
AAAGAGATGTTGGCACCATT+GGG + chr1_1:59625901-59625920 Msa0032470:intron 40.0%
!! TTTCAGGTTGAGCACTTTCT+GGG + chr1_1:59626032-59626051 Msa0032470:intron 40.0%
ATATCCTTGCTAGGTTGCAA+TGG + chr1_1:59626167-59626186 Msa0032470:three_prime_UTR 40.0%
TAGATAGGTCTAGCAGGCAT+AGG + chr1_1:59615851-59615870 Msa0032470:intron 45.0%
AAGAGTGATAAGGATCACCG+AGG + chr1_1:59615889-59615908 Msa0032470:CDS 45.0%
TTCCGGAAGGGAACGTATTA+GGG + chr1_1:59615966-59615985 Msa0032470:CDS 45.0%
GAGAAGGAGAGGAGTAAAGA+TGG + chr1_1:59615997-59616016 Msa0032470:CDS 45.0%
GGAGTAAAGATGGGAAGGTA+AGG + chr1_1:59616007-59616026 Msa0032470:CDS 45.0%
GGATAAGAAGGATCGAGGTA+AGG + chr1_1:59616083-59616102 Msa0032470:intron 45.0%
AGAAGGATCGAGGTAAGGAT+AGG + chr1_1:59616088-59616107 Msa0032470:intron 45.0%
GAAGGATCGAGGTAAGGATA+GGG + chr1_1:59616089-59616108 Msa0032470:intron 45.0%
GAAAGAGAGGGAGATTGAGA+AGG + chr1_1:59616119-59616138 Msa0032470:intron 45.0%
AAAGGGGGAAAGAGAAGACT+AGG + chr1_1:59616166-59616185 Msa0032470:CDS 45.0%
AAGGGGGAAAGAGAAGACTA+GGG + chr1_1:59616167-59616186 Msa0032470:CDS 45.0%
GGAAAGAGAAGACTAGGGAT+AGG + chr1_1:59616172-59616191 Msa0032470:CDS 45.0%
AGCGCGAGAAACATAGAGAT+AGG + chr1_1:59616214-59616233 Msa0032470:CDS 45.0%
GCGCGAGAAACATAGAGATA+GGG + chr1_1:59616215-59616234 Msa0032470:CDS 45.0%
AAGTTATAGAGACGGGGATC+GGG + chr1_1:59616239-59616258 Msa0032470:CDS 45.0%
TAAGATTAGAGAGGAGAGGG+AGG + chr1_1:59616275-59616294 Msa0032470:CDS 45.0%
AGGAAGTAGAAAGGCTCATG+AGG + chr1_1:59616329-59616348 Msa0032470:CDS 45.0%
! CATCCTCGTCTCTCTTTTCA+TGG - chr1_1:59616395-59616414 None:intergenic 45.0%
GAAAAGAGAGACGAGGATGT+TGG + chr1_1:59616396-59616415 Msa0032470:CDS 45.0%
! CAAATTTGTGGGGATGGGTT+AGG - chr1_1:59616754-59616773 None:intergenic 45.0%
!! CAACACAATGAAGGTGTTGG+AGG + chr1_1:59616844-59616863 Msa0032470:intron 45.0%
GGATTTCATGTACCACCTAG+GGG - chr1_1:59616943-59616962 None:intergenic 45.0%
GGGATTTCATGTACCACCTA+GGG - chr1_1:59616944-59616963 None:intergenic 45.0%
TGGGATTTCATGTACCACCT+AGG - chr1_1:59616945-59616964 None:intergenic 45.0%
AGCCATAATTCCTCACCTCT+AGG + chr1_1:59617059-59617078 Msa0032470:intron 45.0%
TGCCTAGAGGTGAGGAATTA+TGG - chr1_1:59617064-59617083 None:intergenic 45.0%
AAAGCCACACAAGGTGAAAG+GGG - chr1_1:59617181-59617200 None:intergenic 45.0%
! CACCTTGTGTGGCTTTTTGT+CGG + chr1_1:59617185-59617204 Msa0032470:intron 45.0%
CTCCAGAAAGTCACGGAAAA+AGG - chr1_1:59617211-59617230 None:intergenic 45.0%
! CTTTTTCCGTGACTTTCTGG+AGG + chr1_1:59617209-59617228 Msa0032470:intron 45.0%
AGGAGGATGCAGAACAAATG+AGG + chr1_1:59617346-59617365 Msa0032470:intron 45.0%
AGGTCTAGTAGTGAAGAGAG+TGG + chr1_1:59617366-59617385 Msa0032470:intron 45.0%
AGTAGTGAAGAGAGTGGACA+TGG + chr1_1:59617372-59617391 Msa0032470:intron 45.0%
! CATGGTGATGAGTAAGAGCT+TGG + chr1_1:59617390-59617409 Msa0032470:intron 45.0%
GATGAGTAAGAGCTTGGAGT+CGG + chr1_1:59617396-59617415 Msa0032470:intron 45.0%
GGAGTCGGTGATTCCATTTA+AGG + chr1_1:59617411-59617430 Msa0032470:intron 45.0%
! AGCTCTAGTAGTGAAGAGAG+TGG + chr1_1:59617560-59617579 Msa0032470:intron 45.0%
! AGTAGTGAAGAGAGTGGACT+TGG + chr1_1:59617566-59617585 Msa0032470:intron 45.0%
!! CTTGGTGATGAGTAAGAGCT+TGG + chr1_1:59617584-59617603 Msa0032470:intron 45.0%
AGAGTAATGAGAGGGGAAGA+GGG + chr1_1:59618007-59618026 Msa0032470:intron 45.0%
GGTGACTGAATTAAGGGCTT+AGG + chr1_1:59618049-59618068 Msa0032470:intron 45.0%
!! CTAGCATGATAGCGGAAAGT+GGG - chr1_1:59618182-59618201 None:intergenic 45.0%
!! ACTAGCATGATAGCGGAAAG+TGG - chr1_1:59618183-59618202 None:intergenic 45.0%
!!! TTTTGGGGTTTGCTGCTATC+CGG + chr1_1:59618205-59618224 Msa0032470:intron 45.0%
AAAACAGAATCTCTGGGCAC+TGG + chr1_1:59618349-59618368 Msa0032470:intron 45.0%
ACCTACACCGAGTATATGTG+TGG + chr1_1:59618550-59618569 Msa0032470:intron 45.0%
CCTACACCGAGTATATGTGT+GGG + chr1_1:59618551-59618570 Msa0032470:intron 45.0%
CCCAGCTAAGTGTAAACTCA+AGG - chr1_1:59618811-59618830 None:intergenic 45.0%
GCATATATGGGTGATGCCTA+AGG - chr1_1:59618844-59618863 None:intergenic 45.0%
GCTTTCGTTGTACTCGAGAA+TGG - chr1_1:59619071-59619090 None:intergenic 45.0%
! GGCGATGGGTGTATTTTCTT+TGG - chr1_1:59619376-59619395 None:intergenic 45.0%
TCCCCCCTCTAAATAAATGG+GGG + chr1_1:59619405-59619424 Msa0032470:intron 45.0%
TCCCCCATTTATTTAGAGGG+GGG - chr1_1:59619409-59619428 None:intergenic 45.0%
! GCAGCTCTCGAAGATTTTTG+AGG + chr1_1:59619738-59619757 Msa0032470:CDS 45.0%
!! CTCGAAGATTTTTGAGGAGC+AGG + chr1_1:59619744-59619763 Msa0032470:CDS 45.0%
ATAGGACAACATCGCAGTAG+AGG + chr1_1:59619872-59619891 Msa0032470:intron 45.0%
TAGGACAACATCGCAGTAGA+GGG + chr1_1:59619873-59619892 Msa0032470:intron 45.0%
TTAAGCTGTTACAGCTTGGG+TGG - chr1_1:59620272-59620291 None:intergenic 45.0%
TATCATACAGATCACCTGGC+GGG + chr1_1:59620676-59620695 Msa0032470:intron 45.0%
! TCATGGCCTTGACAAAGTTG+CGG + chr1_1:59620711-59620730 Msa0032470:CDS 45.0%
! GCAGCCGGATCATCATATTT+TGG - chr1_1:59621114-59621133 None:intergenic 45.0%
TCATGGAAAGCTCACAACCA+TGG - chr1_1:59621390-59621409 None:intergenic 45.0%
! TTAATGGATCCTGCATAGGG+GGG + chr1_1:59621444-59621463 Msa0032470:intron 45.0%
AACCACCAGTTAACCTTCTC+CGG - chr1_1:59621732-59621751 None:intergenic 45.0%
AGAGACAGCTTCAGCTTCAA+GGG - chr1_1:59621890-59621909 None:intergenic 45.0%
AAGAGACAGCTTCAGCTTCA+AGG - chr1_1:59621891-59621910 None:intergenic 45.0%
TGAAGCTGTCTCTTCAGGAT+TGG + chr1_1:59621897-59621916 Msa0032470:CDS 45.0%
GAAGCTGTCTCTTCAGGATT+GGG + chr1_1:59621898-59621917 Msa0032470:CDS 45.0%
GTCTCTTCAGGATTGGGTAT+TGG + chr1_1:59621904-59621923 Msa0032470:CDS 45.0%
! GTATTGGTGACCTTGGTTCT+CGG + chr1_1:59621920-59621939 Msa0032470:intron 45.0%
CTGCTTTAGCATAAGCAGTC+TGG - chr1_1:59622017-59622036 None:intergenic 45.0%
!! TAGCCGTCTAGCTTTCTCTA+AGG - chr1_1:59622142-59622161 None:intergenic 45.0%
! ACGGCTAGCTCTTAAGAAAC+AGG + chr1_1:59622155-59622174 Msa0032470:CDS 45.0%
GATGATCAAAATGCTGCAGC+TGG + chr1_1:59622249-59622268 Msa0032470:CDS 45.0%
TGGGGTCTTCACATTGATGA+AGG + chr1_1:59622321-59622340 Msa0032470:CDS 45.0%
CAATGGCACGGCATATTTGA+TGG + chr1_1:59622609-59622628 Msa0032470:intron 45.0%
TACAGGGGAAGCTGATAAGT+AGG + chr1_1:59622686-59622705 Msa0032470:intron 45.0%
! TCGTCTTCCTTTTCCTCAAC+GGG - chr1_1:59622805-59622824 None:intergenic 45.0%
! CTCGTCTTCCTTTTCCTCAA+CGG - chr1_1:59622806-59622825 None:intergenic 45.0%
CATGAAGTTGCTGTAGGGAA+AGG + chr1_1:59622916-59622935 Msa0032470:CDS 45.0%
GTTGGGATTGTAGAGGATGA+CGG + chr1_1:59623036-59623055 Msa0032470:CDS 45.0%
!! GATTGTAGAGGATGACGGAA+AGG + chr1_1:59623041-59623060 Msa0032470:CDS 45.0%
GACCATTCAAAGACATAGGC+TGG + chr1_1:59623245-59623264 Msa0032470:intron 45.0%
ACCCAGCCTATGTCTTTGAA+TGG - chr1_1:59623250-59623269 None:intergenic 45.0%
GCATGCATAGGAGAAAGAGA+GGG + chr1_1:59623430-59623449 Msa0032470:intron 45.0%
!! GTTCAAGTTGTTGTGTGGCT+AGG + chr1_1:59623571-59623590 Msa0032470:intron 45.0%
GAGGAAAGTGGAAGCAAAGA+GGG - chr1_1:59623740-59623759 None:intergenic 45.0%
TGAGGAAAGTGGAAGCAAAG+AGG - chr1_1:59623741-59623760 None:intergenic 45.0%
! TTGCTTCCAGTTGACTCCTA+AGG + chr1_1:59624116-59624135 Msa0032470:intron 45.0%
TGACTCCTAAGGAAGCCTTT+CGG + chr1_1:59624127-59624146 Msa0032470:CDS 45.0%
AAGTTCCATGGTAAAGGACC+TGG + chr1_1:59624162-59624181 Msa0032470:CDS 45.0%
! TTTTGCCAGGTCCTTTACCA+TGG - chr1_1:59624170-59624189 None:intergenic 45.0%
CAATGTCTGTGGAGAGAATG+AGG + chr1_1:59624265-59624284 Msa0032470:CDS 45.0%
GTCCAAAACGTTGACATGGA+TGG - chr1_1:59624531-59624550 None:intergenic 45.0%
GTAGTCAGTAGCGCAAACTA+TGG - chr1_1:59624612-59624631 None:intergenic 45.0%
!! GGAAAAAGGCTTGGTGATAG+CGG - chr1_1:59624923-59624942 None:intergenic 45.0%
TGTGTAGTTGACGACACCTA+GGG - chr1_1:59624945-59624964 None:intergenic 45.0%
TAGCCGTAACAGCACTATGT+TGG + chr1_1:59625114-59625133 Msa0032470:intron 45.0%
CAAACTAGTGACCCGAAAAG+TGG + chr1_1:59625295-59625314 Msa0032470:CDS 45.0%
GTTGAGAAAGATCTTCCTGG+AGG + chr1_1:59625328-59625347 Msa0032470:CDS 45.0%
! TGACACCTATGCTTGGTGAT+CGG + chr1_1:59625353-59625372 Msa0032470:CDS 45.0%
!! TAGAAACCCTTCGGATTAGC+CGG + chr1_1:59625708-59625727 Msa0032470:intron 45.0%
TTGGTATCTGGCACAAAGAC+CGG - chr1_1:59625730-59625749 None:intergenic 45.0%
!!! CATGCCCGTTTTTAGTCTAG+TGG + chr1_1:59625802-59625821 Msa0032470:intron 45.0%
!! GTTTCAGGTTGAGCACTTTC+TGG + chr1_1:59626031-59626050 Msa0032470:intron 45.0%
!!! TATTACTATTTTTTTTTAAA+TGG - chr1_1:59618136-59618155 None:intergenic 5.0%
!!! TTTTTTTCATATAAATATAT+TGG - chr1_1:59625775-59625794 None:intergenic 5.0%
ATGGGGTAGATAGGTCTAGC+AGG + chr1_1:59615845-59615864 Msa0032470:intron 50.0%
AGGATCACCGAGGTAAAGAC+CGG + chr1_1:59615899-59615918 Msa0032470:CDS 50.0%
CACATCCTCAGAAACCCTCT+TGG - chr1_1:59615932-59615951 None:intergenic 50.0%
! CAAGAGGGTTTCTGAGGATG+TGG + chr1_1:59615930-59615949 Msa0032470:CDS 50.0%
! GGTTTCTGAGGATGTGGAGA+AGG + chr1_1:59615936-59615955 Msa0032470:CDS 50.0%
GTTCCGGAAGGGAACGTATT+AGG + chr1_1:59615965-59615984 Msa0032470:CDS 50.0%
GTCCCTAATACGTTCCCTTC+CGG - chr1_1:59615971-59615990 None:intergenic 50.0%
GGAGAGGAGTAAAGATGGGA+AGG + chr1_1:59616002-59616021 Msa0032470:CDS 50.0%
AAGATGGGAAGGTAAGGGAG+AGG + chr1_1:59616013-59616032 Msa0032470:CDS 50.0%
AGATGGGAAGGTAAGGGAGA+GGG + chr1_1:59616014-59616033 Msa0032470:CDS 50.0%
! ATAGAGAGAAAGAGCGCGAG+AGG + chr1_1:59616055-59616074 Msa0032470:CDS 50.0%
! TAGAGAGAAAGAGCGCGAGA+GGG + chr1_1:59616056-59616075 Msa0032470:CDS 50.0%
GAGAGGGATAAGAAGGATCG+AGG + chr1_1:59616078-59616097 Msa0032470:CDS 50.0%
! ATAGGGAGCGTGAGAAAGAG+AGG + chr1_1:59616106-59616125 Msa0032470:intron 50.0%
! TAGGGAGCGTGAGAAAGAGA+GGG + chr1_1:59616107-59616126 Msa0032470:intron 50.0%
AGAAGACTAGGGATAGGGAG+AGG + chr1_1:59616178-59616197 Msa0032470:CDS 50.0%
GAAGACTAGGGATAGGGAGA+GGG + chr1_1:59616179-59616198 Msa0032470:CDS 50.0%
TAGGGATAGGGAGAGGGATA+AGG + chr1_1:59616185-59616204 Msa0032470:CDS 50.0%
AGGGATAGGGAGAGGGATAA+GGG + chr1_1:59616186-59616205 Msa0032470:CDS 50.0%
TAGGGAGAGGGATAAGGGAA+AGG + chr1_1:59616191-59616210 Msa0032470:CDS 50.0%
ATTGTAGTGTAGCAGCCCCT+AGG + chr1_1:59616925-59616944 Msa0032470:intron 50.0%
CGCTACAGCTGCAACACAAT+GGG - chr1_1:59616964-59616983 None:intergenic 50.0%
! AGGGGGTGATGAAGCTGTTT+TGG - chr1_1:59617163-59617182 None:intergenic 50.0%
AAGCCACACAAGGTGAAAGG+GGG - chr1_1:59617180-59617199 None:intergenic 50.0%
! GGCCTTTTTCCGTGACTTTC+TGG + chr1_1:59617206-59617225 Msa0032470:intron 50.0%
GAAGGACCTCCAGAAAGTCA+CGG - chr1_1:59617218-59617237 None:intergenic 50.0%
AAGTGATTGTTTCCGGAGGG+AGG - chr1_1:59617262-59617281 None:intergenic 50.0%
GAGAGTAATGAGAGGGGAAG+AGG + chr1_1:59618006-59618025 Msa0032470:intron 50.0%
GGAGTTGGAAGTTCAAGTCC+TGG + chr1_1:59618070-59618089 Msa0032470:intron 50.0%
TGGAAGTTCAAGTCCTGGCA+AGG + chr1_1:59618075-59618094 Msa0032470:intron 50.0%
! ATAGCGGAAAGTGGGATGAC+TGG - chr1_1:59618174-59618193 None:intergenic 50.0%
!! TTTGGGGTTTGCTGCTATCC+GGG + chr1_1:59618206-59618225 Msa0032470:intron 50.0%
!! GGCATTTCAGTGGGCTAGTT+TGG - chr1_1:59618269-59618288 None:intergenic 50.0%
!! CCCACACATATACTCGGTGT+AGG - chr1_1:59618554-59618573 None:intergenic 50.0%
TTAGAGGGGGGATGTTAAGC+TGG - chr1_1:59619397-59619416 None:intergenic 50.0%
CTGTTTGGGAGACTTAGGGA+GGG - chr1_1:59619459-59619478 None:intergenic 50.0%
CTCCCTAAGTCTCCCAAACA+GGG + chr1_1:59619458-59619477 Msa0032470:intron 50.0%
TCCCTAAGTCTCCCAAACAG+GGG + chr1_1:59619459-59619478 Msa0032470:intron 50.0%
ACCCCTGTTTGGGAGACTTA+GGG - chr1_1:59619463-59619482 None:intergenic 50.0%
AACCCCTGTTTGGGAGACTT+AGG - chr1_1:59619464-59619483 None:intergenic 50.0%
AAGTCTCCCAAACAGGGGTT+TGG + chr1_1:59619464-59619483 Msa0032470:intron 50.0%
AGTCTCCCAAACAGGGGTTT+GGG + chr1_1:59619465-59619484 Msa0032470:intron 50.0%
AGTGACCCAAACCCCTGTTT+GGG - chr1_1:59619473-59619492 None:intergenic 50.0%
AAGTGACCCAAACCCCTGTT+TGG - chr1_1:59619474-59619493 None:intergenic 50.0%
GAGGATACGACACATCACAC+TGG + chr1_1:59619906-59619925 Msa0032470:CDS 50.0%
!! CTGGCTCTGGACCTGTTTAA+CGG + chr1_1:59620417-59620436 Msa0032470:intron 50.0%
!! TGGCTCTGGACCTGTTTAAC+GGG + chr1_1:59620418-59620437 Msa0032470:intron 50.0%
ATCATACAGATCACCTGGCG+GGG + chr1_1:59620677-59620696 Msa0032470:intron 50.0%
CACCTTCCGCAACTTTGTCA+AGG - chr1_1:59620720-59620739 None:intergenic 50.0%
CTTGACAAAGTTGCGGAAGG+TGG + chr1_1:59620718-59620737 Msa0032470:CDS 50.0%
! GATCAGCCCATACTTGCTGA+TGG + chr1_1:59620763-59620782 Msa0032470:CDS 50.0%
GTTCAATGATGACCCCTCCT+CGG + chr1_1:59621074-59621093 Msa0032470:CDS 50.0%
CCTTCTCCGGAGCTGTTAAT+AGG - chr1_1:59621719-59621738 None:intergenic 50.0%
CCTATTAACAGCTCCGGAGA+AGG + chr1_1:59621716-59621735 Msa0032470:intron 50.0%
GAAGCTGAAGCTGTCTCTTC+AGG + chr1_1:59621892-59621911 Msa0032470:CDS 50.0%
!! GGATTGGGTATTGGTGACCT+TGG + chr1_1:59621913-59621932 Msa0032470:CDS 50.0%
TCGCATCTTTCCGAGAACCA+AGG - chr1_1:59621933-59621952 None:intergenic 50.0%
GTTCTCGGAAAGATGCGAAG+AGG + chr1_1:59621935-59621954 Msa0032470:intron 50.0%
!! CAGGAAGAGAAAGGAGCATC+TGG + chr1_1:59622174-59622193 Msa0032470:CDS 50.0%
CAAGGTGGTCCTTACAGAGA+TGG + chr1_1:59622287-59622306 Msa0032470:CDS 50.0%
ACCTGTTCCCGTTGAGGAAA+AGG + chr1_1:59622795-59622814 Msa0032470:CDS 50.0%
! TCCTTTTCCTCAACGGGAAC+AGG - chr1_1:59622799-59622818 None:intergenic 50.0%
CGTTGAGGAAAAGGAAGACG+AGG + chr1_1:59622804-59622823 Msa0032470:CDS 50.0%
AAAAGGAAGACGAGGCTGGT+GGG + chr1_1:59622812-59622831 Msa0032470:CDS 50.0%
TCCTCCTTGTCCTCTGAGTT+GGG - chr1_1:59622874-59622893 None:intergenic 50.0%
TGAATGGGGTGGCAGAAACA+TGG + chr1_1:59622993-59623012 Msa0032470:CDS 50.0%
GGCATGCATAGGAGAAAGAG+AGG + chr1_1:59623429-59623448 Msa0032470:intron 50.0%
TGCATAGGAGAAAGAGAGGG+AGG + chr1_1:59623433-59623452 Msa0032470:intron 50.0%
CAAGTTGTTGTGTGGCTAGG+TGG + chr1_1:59623574-59623593 Msa0032470:intron 50.0%
! CTAGATCCTACCGGCTGTTA+TGG + chr1_1:59623690-59623709 Msa0032470:intron 50.0%
AGGCTTCCTTAGGAGTCAAC+TGG - chr1_1:59624125-59624144 None:intergenic 50.0%
AGGACCTGGCAAAATGAAGC+AGG + chr1_1:59624176-59624195 Msa0032470:CDS 50.0%
! GCGCTACTGACTACAGTAAG+AGG + chr1_1:59624618-59624637 Msa0032470:intron 50.0%
! AGAAGTGCAGAACGTGGGTA+GGG - chr1_1:59624747-59624766 None:intergenic 50.0%
! AAGAAGTGCAGAACGTGGGT+AGG - chr1_1:59624748-59624767 None:intergenic 50.0%
! TGGGAAGAAGTGCAGAACGT+GGG - chr1_1:59624752-59624771 None:intergenic 50.0%
! ATGGGAAGAAGTGCAGAACG+TGG - chr1_1:59624753-59624772 None:intergenic 50.0%
! TCACCAAGCCTTTTTCCCCT+AGG + chr1_1:59624926-59624945 Msa0032470:intron 50.0%
ACACCTAGGGGAAAAAGGCT+TGG - chr1_1:59624932-59624951 None:intergenic 50.0%
TGACGACACCTAGGGGAAAA+AGG - chr1_1:59624937-59624956 None:intergenic 50.0%
GTGTAGTTGACGACACCTAG+GGG - chr1_1:59624944-59624963 None:intergenic 50.0%
CTGTGTAGTTGACGACACCT+AGG - chr1_1:59624946-59624965 None:intergenic 50.0%
AGGGGAGAGATAAAGGCAGA+TGG - chr1_1:59625051-59625070 None:intergenic 50.0%
! ACCTATGCTTGGTGATCGGA+AGG + chr1_1:59625357-59625376 Msa0032470:CDS 50.0%
ACCTTCCGATCACCAAGCAT+AGG - chr1_1:59625361-59625380 None:intergenic 50.0%
CAAAGACCGGCTAATCCGAA+GGG - chr1_1:59625717-59625736 None:intergenic 50.0%
ACAAAGACCGGCTAATCCGA+AGG - chr1_1:59625718-59625737 None:intergenic 50.0%
CTCGGATACCCCATCAAACT+CGG + chr1_1:59626082-59626101 Msa0032470:CDS 50.0%
TCGGATACCCCATCAAACTC+GGG + chr1_1:59626083-59626102 Msa0032470:CDS 50.0%
GCTACCATTGCAACCTAGCA+AGG - chr1_1:59626174-59626193 None:intergenic 50.0%
CTATGGATTCTTCACCCCCA+TGG - chr1_1:59626211-59626230 None:intergenic 50.0%
GTCTAGCAGGCATAGGAGCA+AGG + chr1_1:59615858-59615877 Msa0032470:CDS 55.0%
GCAGGCATAGGAGCAAGGAT+AGG + chr1_1:59615863-59615882 Msa0032470:CDS 55.0%
GGATCACCGAGGTAAAGACC+GGG + chr1_1:59615900-59615919 Msa0032470:CDS 55.0%
CCTGATCCCGGTCTTTACCT+CGG - chr1_1:59615909-59615928 None:intergenic 55.0%
AAACCCTCTTGGCCTGATCC+CGG - chr1_1:59615921-59615940 None:intergenic 55.0%
TCAGGCCAAGAGGGTTTCTG+AGG + chr1_1:59615924-59615943 Msa0032470:CDS 55.0%
GAGGATGTGGAGAAGGAGAG+AGG + chr1_1:59615943-59615962 Msa0032470:CDS 55.0%
GTGGAGAAGGAGAGAGGTTC+CGG + chr1_1:59615949-59615968 Msa0032470:CDS 55.0%
AGAAGGAGAGAGGTTCCGGA+AGG + chr1_1:59615953-59615972 Msa0032470:CDS 55.0%
GAAGGAGAGAGGTTCCGGAA+GGG + chr1_1:59615954-59615973 Msa0032470:CDS 55.0%
TATTAGGGACGAGCGCGAGA+AGG + chr1_1:59615981-59616000 Msa0032470:CDS 55.0%
CGAGAGGGAGAGGGATAAGA+AGG + chr1_1:59616071-59616090 Msa0032470:CDS 55.0%
TAGAGACGGGGATCGGGATA+AGG + chr1_1:59616245-59616264 Msa0032470:CDS 55.0%
AGAGACGGGGATCGGGATAA+GGG + chr1_1:59616246-59616265 Msa0032470:CDS 55.0%
! GGTGTTGGAGGCTGCAATGA+AGG + chr1_1:59616856-59616875 Msa0032470:intron 55.0%
TTGGAGGCTGCAATGAAGGC+AGG + chr1_1:59616860-59616879 Msa0032470:intron 55.0%
GGGGCTGCTACACTACAATG+CGG - chr1_1:59616924-59616943 None:intergenic 55.0%
GCGCTACAGCTGCAACACAA+TGG - chr1_1:59616965-59616984 None:intergenic 55.0%
AGAGGGAATGCCTAGAGGTG+AGG - chr1_1:59617072-59617091 None:intergenic 55.0%
TCACCCCCTTTCACCTTGTG+TGG + chr1_1:59617174-59617193 Msa0032470:intron 55.0%
GGCCGACAAAAAGCCACACA+AGG - chr1_1:59617190-59617209 None:intergenic 55.0%
GATTGTTTCCGGAGGGAGGA+GGG - chr1_1:59617258-59617277 None:intergenic 55.0%
TGATTGTTTCCGGAGGGAGG+AGG - chr1_1:59617259-59617278 None:intergenic 55.0%
CGGTATCTATAGGGGCAGCT+TGG - chr1_1:59617307-59617326 None:intergenic 55.0%
GAGAGGCTCCTGCAAGTGTA+AGG + chr1_1:59618631-59618650 Msa0032470:intron 55.0%
GCTGGGATCTCTTAGCCCTT+AGG + chr1_1:59618825-59618844 Msa0032470:intron 55.0%
CTCGAGTACAACGAAAGCCC+AGG + chr1_1:59619073-59619092 Msa0032470:intron 55.0%
GGGGATGTTAAGCTGGCGAT+GGG - chr1_1:59619390-59619409 None:intergenic 55.0%
TGGGAGACTTAGGGAGGGTA+GGG - chr1_1:59619454-59619473 None:intergenic 55.0%
TTGGGAGACTTAGGGAGGGT+AGG - chr1_1:59619455-59619474 None:intergenic 55.0%
CCTGTTTGGGAGACTTAGGG+AGG - chr1_1:59619460-59619479 None:intergenic 55.0%
CCTCCCTAAGTCTCCCAAAC+AGG + chr1_1:59619457-59619476 Msa0032470:intron 55.0%
AGTAGAGGGAAGTGACGACG+AGG + chr1_1:59619887-59619906 Msa0032470:CDS 55.0%
TCATACAGATCACCTGGCGG+GGG + chr1_1:59620678-59620697 Msa0032470:intron 55.0%
GCGGGGGTCAAAGTTCTTCA+TGG + chr1_1:59620694-59620713 Msa0032470:CDS 55.0%
GGCCTTGACAAAGTTGCGGA+AGG + chr1_1:59620715-59620734 Msa0032470:CDS 55.0%
TGATGATCCGGCTGCTGAAG+AGG + chr1_1:59621119-59621138 Msa0032470:CDS 55.0%
CAGCAAACCTCTTCAGCAGC+CGG - chr1_1:59621129-59621148 None:intergenic 55.0%
! AAGGGTTTTCCCCCCTATGC+AGG - chr1_1:59621456-59621475 None:intergenic 55.0%
CAGCTCCGGAGAAGGTTAAC+TGG + chr1_1:59621724-59621743 Msa0032470:intron 55.0%
CTCCGGAGAAGGTTAACTGG+TGG + chr1_1:59621727-59621746 Msa0032470:CDS 55.0%
! TCAGAAGCACGTAGGCCAGA+TGG + chr1_1:59622739-59622758 Msa0032470:intron 55.0%
GAGGAAAAGGAAGACGAGGC+TGG + chr1_1:59622808-59622827 Msa0032470:CDS 55.0%
GAAAAGGAAGACGAGGCTGG+TGG + chr1_1:59622811-59622830 Msa0032470:CDS 55.0%
CTCCTCCTTGTCCTCTGAGT+TGG - chr1_1:59622875-59622894 None:intergenic 55.0%
GCTGTAGGGAAAGGACTGTC+TGG + chr1_1:59622925-59622944 Msa0032470:CDS 55.0%
ACTGTTGCGCTGCAGCAAAG+AGG - chr1_1:59623553-59623572 None:intergenic 55.0%
GAAGTGCAGAACGTGGGTAG+GGG - chr1_1:59624746-59624765 None:intergenic 55.0%
AGCATAGGTGTCAAGCCTCC+AGG - chr1_1:59625346-59625365 None:intergenic 55.0%
GGAGGCTTGACACCTATGCT+TGG + chr1_1:59625346-59625365 Msa0032470:CDS 55.0%
! TTGGGGTGCCCGAGTTTGAT+GGG - chr1_1:59626094-59626113 None:intergenic 55.0%
! TTTGGGGTGCCCGAGTTTGA+TGG - chr1_1:59626095-59626114 None:intergenic 55.0%
CCGAGGTAAAGACCGGGATC+AGG + chr1_1:59615906-59615925 Msa0032470:CDS 60.0%
AAGACCGGGATCAGGCCAAG+AGG + chr1_1:59615914-59615933 Msa0032470:CDS 60.0%
AGACCGGGATCAGGCCAAGA+GGG + chr1_1:59615915-59615934 Msa0032470:CDS 60.0%
! AGAAAGAGCGCGAGAGGGAG+AGG + chr1_1:59616061-59616080 Msa0032470:CDS 60.0%
! GAAAGAGCGCGAGAGGGAGA+GGG + chr1_1:59616062-59616081 Msa0032470:CDS 60.0%
! TAGTGAGAGGGCGCGAGAGA+AGG + chr1_1:59616143-59616162 Msa0032470:CDS 60.0%
! AGAGGGCGCGAGAGAAGGAA+AGG + chr1_1:59616148-59616167 Msa0032470:CDS 60.0%
! GAGGGCGCGAGAGAAGGAAA+GGG + chr1_1:59616149-59616168 Msa0032470:CDS 60.0%
AGGGCGCGAGAGAAGGAAAG+GGG + chr1_1:59616150-59616169 Msa0032470:CDS 60.0%
GAGACGGGGATCGGGATAAG+GGG + chr1_1:59616247-59616266 Msa0032470:CDS 60.0%
GTAGTGTAGCAGCCCCTAGG+TGG + chr1_1:59616928-59616947 Msa0032470:intron 60.0%
TCTAGTGTCCCTCCTCCCTC+CGG + chr1_1:59617247-59617266 Msa0032470:intron 60.0%
! GGCTGGTTGGATGCTGTGAG+AGG + chr1_1:59618614-59618633 Msa0032470:intron 60.0%
GGGGGATGTTAAGCTGGCGA+TGG - chr1_1:59619391-59619410 None:intergenic 60.0%
GGGAGACTTAGGGAGGGTAG+GGG - chr1_1:59619453-59619472 None:intergenic 60.0%
GAAGAACTTTGACCCCCGCC+AGG - chr1_1:59620693-59620712 None:intergenic 60.0%
!! AGAGGCACCTGTTCCCGTTG+AGG + chr1_1:59622789-59622808 Msa0032470:CDS 60.0%
AGACGAGCAGCCCAACTCAG+AGG + chr1_1:59622861-59622880 Msa0032470:intron 60.0%
GCAGCCCAACTCAGAGGACA+AGG + chr1_1:59622867-59622886 Msa0032470:intron 60.0%
GCCCAACTCAGAGGACAAGG+AGG + chr1_1:59622870-59622889 Msa0032470:intron 60.0%
GTTGTGTGGCTAGGTGGTCG+TGG + chr1_1:59623580-59623599 Msa0032470:intron 60.0%
! TCCTACCGGCTGTTATGGCG+AGG + chr1_1:59623695-59623714 Msa0032470:intron 60.0%
! CCTACCGGCTGTTATGGCGA+GGG + chr1_1:59623696-59623715 Msa0032470:intron 60.0%
GAAGCCCTCGCCATAACAGC+CGG - chr1_1:59623703-59623722 None:intergenic 60.0%
! TGGGGTGCCCGAGTTTGATG+GGG - chr1_1:59626093-59626112 None:intergenic 60.0%
GGGCGCGAGAGAAGGAAAGG+GGG + chr1_1:59616151-59616170 Msa0032470:CDS 65.0%
AGGAAGACGAGGCTGGTGGG+TGG + chr1_1:59622815-59622834 Msa0032470:CDS 65.0%
CCCTCGCCATAACAGCCGGT+AGG - chr1_1:59623699-59623718 None:intergenic 65.0%
GGGACGAGCGCGAGAAGGAG+AGG + chr1_1:59615986-59616005 Msa0032470:CDS 70.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 59615845 59626515 59615845 ID=Msa0032470;Name=Msa0032470
chr1_1 mRNA 59615845 59626515 59615845 ID=Msa0032470-mRNA-1;Parent=Msa0032470;Name=Msa0032470-mRNA-1;_AED=0.22;_eAED=0.22;_QI=0|0.66|0.52|1|0.61|0.42|19|365|819
chr1_1 exon 59615845 59615849 59615845 ID=Msa0032470-mRNA-1:exon:18429;Parent=Msa0032470-mRNA-1
chr1_1 exon 59615858 59616099 59615858 ID=Msa0032470-mRNA-1:exon:18430;Parent=Msa0032470-mRNA-1
chr1_1 exon 59616124 59616366 59616124 ID=Msa0032470-mRNA-1:exon:18431;Parent=Msa0032470-mRNA-1
chr1_1 exon 59616388 59616514 59616388 ID=Msa0032470-mRNA-1:exon:18432;Parent=Msa0032470-mRNA-1
chr1_1 exon 59619654 59619765 59619654 ID=Msa0032470-mRNA-1:exon:18433;Parent=Msa0032470-mRNA-1
chr1_1 exon 59619876 59619927 59619876 ID=Msa0032470-mRNA-1:exon:18434;Parent=Msa0032470-mRNA-1
chr1_1 exon 59620686 59620799 59620686 ID=Msa0032470-mRNA-1:exon:18435;Parent=Msa0032470-mRNA-1
chr1_1 exon 59620882 59620978 59620882 ID=Msa0032470-mRNA-1:exon:18436;Parent=Msa0032470-mRNA-1
chr1_1 exon 59621074 59621140 59621074 ID=Msa0032470-mRNA-1:exon:18437;Parent=Msa0032470-mRNA-1
chr1_1 exon 59621238 59621297 59621238 ID=Msa0032470-mRNA-1:exon:18438;Parent=Msa0032470-mRNA-1
chr1_1 exon 59621727 59621934 59621727 ID=Msa0032470-mRNA-1:exon:18439;Parent=Msa0032470-mRNA-1
chr1_1 exon 59621947 59622132 59621947 ID=Msa0032470-mRNA-1:exon:18440;Parent=Msa0032470-mRNA-1
chr1_1 exon 59622145 59622342 59622145 ID=Msa0032470-mRNA-1:exon:18441;Parent=Msa0032470-mRNA-1
chr1_1 exon 59622743 59622843 59622743 ID=Msa0032470-mRNA-1:exon:18442;Parent=Msa0032470-mRNA-1
chr1_1 exon 59622871 59623119 59622871 ID=Msa0032470-mRNA-1:exon:18443;Parent=Msa0032470-mRNA-1
chr1_1 exon 59624126 59624346 59624126 ID=Msa0032470-mRNA-1:exon:18444;Parent=Msa0032470-mRNA-1
chr1_1 exon 59625294 59625378 59625294 ID=Msa0032470-mRNA-1:exon:18445;Parent=Msa0032470-mRNA-1
chr1_1 exon 59626038 59626323 59626038 ID=Msa0032470-mRNA-1:exon:18446;Parent=Msa0032470-mRNA-1
chr1_1 exon 59626344 59626515 59626344 ID=Msa0032470-mRNA-1:exon:18447;Parent=Msa0032470-mRNA-1
chr1_1 CDS 59615845 59615849 59615845 ID=Msa0032470-mRNA-1:cds;Parent=Msa0032470-mRNA-1
chr1_1 CDS 59615858 59616099 59615858 ID=Msa0032470-mRNA-1:cds;Parent=Msa0032470-mRNA-1
chr1_1 CDS 59616124 59616366 59616124 ID=Msa0032470-mRNA-1:cds;Parent=Msa0032470-mRNA-1
chr1_1 CDS 59616388 59616514 59616388 ID=Msa0032470-mRNA-1:cds;Parent=Msa0032470-mRNA-1
chr1_1 CDS 59619654 59619765 59619654 ID=Msa0032470-mRNA-1:cds;Parent=Msa0032470-mRNA-1
chr1_1 CDS 59619876 59619927 59619876 ID=Msa0032470-mRNA-1:cds;Parent=Msa0032470-mRNA-1
chr1_1 CDS 59620686 59620799 59620686 ID=Msa0032470-mRNA-1:cds;Parent=Msa0032470-mRNA-1
chr1_1 CDS 59620882 59620978 59620882 ID=Msa0032470-mRNA-1:cds;Parent=Msa0032470-mRNA-1
chr1_1 CDS 59621074 59621140 59621074 ID=Msa0032470-mRNA-1:cds;Parent=Msa0032470-mRNA-1
chr1_1 CDS 59621238 59621297 59621238 ID=Msa0032470-mRNA-1:cds;Parent=Msa0032470-mRNA-1
chr1_1 CDS 59621727 59621934 59621727 ID=Msa0032470-mRNA-1:cds;Parent=Msa0032470-mRNA-1
chr1_1 CDS 59621947 59622132 59621947 ID=Msa0032470-mRNA-1:cds;Parent=Msa0032470-mRNA-1
chr1_1 CDS 59622145 59622342 59622145 ID=Msa0032470-mRNA-1:cds;Parent=Msa0032470-mRNA-1
chr1_1 CDS 59622743 59622843 59622743 ID=Msa0032470-mRNA-1:cds;Parent=Msa0032470-mRNA-1
chr1_1 CDS 59622871 59623119 59622871 ID=Msa0032470-mRNA-1:cds;Parent=Msa0032470-mRNA-1
chr1_1 CDS 59624126 59624346 59624126 ID=Msa0032470-mRNA-1:cds;Parent=Msa0032470-mRNA-1
chr1_1 CDS 59625294 59625378 59625294 ID=Msa0032470-mRNA-1:cds;Parent=Msa0032470-mRNA-1
chr1_1 CDS 59626038 59626130 59626038 ID=Msa0032470-mRNA-1:cds;Parent=Msa0032470-mRNA-1
chr1_1 three_prime_UTR 59626131 59626323 59626131 ID=Msa0032470-mRNA-1:three_prime_utr;Parent=Msa0032470-mRNA-1
chr1_1 three_prime_UTR 59626344 59626515 59626344 ID=Msa0032470-mRNA-1:three_prime_utr;Parent=Msa0032470-mRNA-1
Gene Sequence

>Msa0032470

ATGGGGTCTAGCAGGCATAGGAGCAAGGATAGGAAGAAGAGTGATAAGGATCACCGAGGTAAAGACCGGGATCAGGCCAAGAGGGTTTCTGAGGATGTGGAGAAGGAGAGAGGTTCCGGAAGGGAACGTATTAGGGACGAGCGCGAGAAGGAGAGGAGTAAAGATGGGAAGGTAAGGGAGAGGGATTACGATAGAGAGAAATATAGAGAGAAAGAGCGCGAGAGGGAGAGGGATAAGAAGGATCGAGAGAGGGAGATTGAGAAGGATAGTGAGAGGGCGCGAGAGAAGGAAAGGGGGAAAGAGAAGACTAGGGATAGGGAGAGGGATAAGGGAAAGGAGCGCGAGAAACATAGAGATAGGGAAAGTTATAGAGACGGGGATCGGGATAAGGGGAAAGATAAGATTAGAGAGGAGAGGGAGGCTGATAGAGAGAAAGATAGGTCAAGGGATAGAGGAAGTAGAAAGGCTCATGAGGAAGATTATGAATCGGATTACCATGAAAAGAGAGACGAGGATGTTGGTAAACATGAAAAGGCTTCAAAAATCAATCAAGATGATAAAGAGGGGGAGACTTCAGCAAACTTGTCATCAAAAGAACTTGAAGAACGTATCTTGAAGATGAAAGAAACAAGGACAAAGAAACAATCTGAGATTTCATCATGGCTTAATAAAAGCCGTAAGCTTGAAAAGGAAAGAGTATTGCAGCTCTCGAAGATTTTTGAGGAGCAGGACAACATCGCAGTAGAGGGAAGTGACGACGAGGATACGACACATCACACTGATCACCTGGCGGGGGTCAAAGTTCTTCATGGCCTTGACAAAGTTGCGGAAGGTGGTACTGTAGTTCTGACTATCAGAGATCAGCCCATACTTGCTGATGGTGATATTAATGAAGACATTGATATGCTTGAAAATGTGGAAATCGGAGAACAAAAACGTCGGGATGATGCTTATAAAGCTGCAAAAAAGAAAACTGGCATATATGACGATAAGTTCAATGATGACCCCTCCTCGGAAAAGAAAATACTTCCAAAATATGATGATCCGGCTGCTGAAGAGGGTTTAACTTTGGATGAAAGAGGAAGATTCTCAGGCGAAGCTGAAAAGAGACTTGAAGAGCTCCGGAGAAGGTTAACTGGTGGTTCCACTAATAACTTTGAAGACCTTACTTCATCTGGAAAGGTATCCTCAGATTACTATTCTCACGAAGAAATGCTTCAATTTAAGAAGCCCAAGAAGAAAAAGTCCTTACGGAAGAAAGATAAGCTGGACATTAATGCCCTTGAAGCTGAAGCTGTCTCTTCAGGATTGGGTATTGGTGACCTTGATGCGAAGAGGCAAGCCATCAAAGATGAGCAAGAAAGATTGGCAGCTGAAACGAGAAATAATGCGTACCAGACTGCTTATGCTAAAGCAGATGAAGCCTCCAAATTACTTCGTCCAGAACAATCTCCGTATGTTAAAGCAGAGGAAGATGAAACTCCAGTTTTTGCAGATGATGACGAGGATCTTCAGAAAGCTAGACGGCTAGCTCTTAAGAAACAGGAAGAGAAAGGAGCATCTGGCCCTCAAGCAATTGCTTTACTTGCCAGCTTAAATCCTAGTAATGAGAATGTTGATGATCAAAATGCTGCAGCTGGAGAGTCAAAAGAAAACAAGGTGGTCCTTACAGAGATGGAAGAATTTGTCTGGGGTCTTCACATTGATGAAGAAGCACGTAGGCCAGATGGTGAAGATGTTTTCATGCAAGATGACGAAGAGGCACCTGTTCCCGTTGAGGAAAAGGAAGACGAGGCTGGTGGGTGGACTGAACCCAACTCAGAGGACAAGGAGGAGATAGTTCCTGATGAAACTATACATGAAGTTGCTGTAGGGAAAGGACTGTCTGGAGCATTGAAACTGCTTAAAGATCGAGGAACACTTAAAGAAAGTGTTGAATGGGGTGGCAGAAACATGGATAAGAAAAAAAGCAAATTGGTTGGGATTGTAGAGGATGACGGAAAGGAAGCACCAAATAAAAAGGAGATTCACATTGAGAGGACAGATGAGTTTGGGAGAATCTTGACTCCTAAGGAAGCCTTTCGGATAATTTCTCATAAGTTCCATGGTAAAGGACCTGGCAAAATGAAGCAGGAAAAGCGTATGAAACAATTTTACGAAGAATTGAAATTGAAGCAAATGAAGAGTTCAGATACACCATCAATGTCTGTGGAGAGAATGAGGGAAGCTCAAGCTCGTAACAAGACACCCTATCTTGTTCTTAGTGGTCATGTTAAAGCAGGACAAACTAGTGACCCGAAAAGTGGTTTTGCTACAGTTGAGAAAGATCTTCCTGGAGGCTTGACACCTATGCTTGGTGATCGGAAGGTTGAGCACTTTCTGGGAATCAAGAGAAAAGCTGAACAATCAAGCTCGGATACCCCATCAAACTCGGGCACCCCAAAAAAGTCAAAATCTTGA
Protein sequence

>Msa0032470

MGSSRHRSKDRKKSDKDHRGKDRDQAKRVSEDVEKERGSGRERIRDEREKERSKDGKVRERDYDREKYREKERERERDKKDREREIEKDSERAREKERGKEKTRDRERDKGKEREKHRDRESYRDGDRDKGKDKIREEREADREKDRSRDRGSRKAHEEDYESDYHEKRDEDVGKHEKASKINQDDKEGETSANLSSKELEERILKMKETRTKKQSEISSWLNKSRKLEKERVLQLSKIFEEQDNIAVEGSDDEDTTHHTDHLAGVKVLHGLDKVAEGGTVVLTIRDQPILADGDINEDIDMLENVEIGEQKRRDDAYKAAKKKTGIYDDKFNDDPSSEKKILPKYDDPAAEEGLTLDERGRFSGEAEKRLEELRRRLTGGSTNNFEDLTSSGKVSSDYYSHEEMLQFKKPKKKKSLRKKDKLDINALEAEAVSSGLGIGDLDAKRQAIKDEQERLAAETRNNAYQTAYAKADEASKLLRPEQSPYVKAEEDETPVFADDDEDLQKARRLALKKQEEKGASGPQAIALLASLNPSNENVDDQNAAAGESKENKVVLTEMEEFVWGLHIDEEARRPDGEDVFMQDDEEAPVPVEEKEDEAGGWTEPNSEDKEEIVPDETIHEVAVGKGLSGALKLLKDRGTLKESVEWGGRNMDKKKSKLVGIVEDDGKEAPNKKEIHIERTDEFGRILTPKEAFRIISHKFHGKGPGKMKQEKRMKQFYEELKLKQMKSSDTPSMSVERMREAQARNKTPYLVLSGHVKAGQTSDPKSGFATVEKDLPGGLTPMLGDRKVEHFLGIKRKAEQSSSDTPSNSGTPKKSKS*