Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0796440 | G7JXC7 | 97.479 | 357 | 8 | 1 | 47 | 403 | 6 | 361 | 0.0 | 688 |
Gene ID | Type | Classification |
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Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0002560 | Msa0796440 | 0.817913 | 2.577022e-52 | -8.615850e-47 |
Msa0003630 | Msa0796440 | 0.801497 | 8.757918e-49 | -8.615850e-47 |
Msa0007850 | Msa0796440 | 0.819835 | 9.428046e-53 | -8.615850e-47 |
Msa0010770 | Msa0796440 | 0.846807 | 1.721914e-59 | -8.615850e-47 |
Msa0023330 | Msa0796440 | 0.803406 | 3.539062e-49 | -8.615850e-47 |
Msa0029630 | Msa0796440 | 0.816065 | 6.700290e-52 | -8.615850e-47 |
Msa0030300 | Msa0796440 | 0.836221 | 1.062249e-56 | -8.615850e-47 |
Msa0031180 | Msa0796440 | 0.813049 | 3.116247e-51 | -8.615850e-47 |
Msa0032470 | Msa0796440 | 0.809496 | 1.838872e-50 | -8.615850e-47 |
Msa0033880 | Msa0796440 | 0.801780 | 7.659868e-49 | -8.615850e-47 |
Msa0037160 | Msa0796440 | 0.822066 | 2.889568e-53 | -8.615850e-47 |
Msa0038000 | Msa0796440 | 0.897981 | 8.289232e-77 | -8.615850e-47 |
Msa0038440 | Msa0796440 | 0.887466 | 1.391921e-72 | -8.615850e-47 |
Msa0039220 | Msa0796440 | 0.809630 | 1.720977e-50 | -8.615850e-47 |
Msa0039250 | Msa0796440 | 0.814287 | 1.663802e-51 | -8.615850e-47 |
Msa0041690 | Msa0796440 | 0.827271 | 1.715950e-54 | -8.615850e-47 |
Msa0043500 | Msa0796440 | 0.817696 | 2.884137e-52 | -8.615850e-47 |
Msa0043650 | Msa0796440 | 0.802351 | 5.846717e-49 | -8.615850e-47 |
Msa0045490 | Msa0796440 | 0.872699 | 2.601627e-67 | -8.615850e-47 |
Msa0047250 | Msa0796440 | 0.807194 | 5.695191e-50 | -8.615850e-47 |
Msa0051630 | Msa0796440 | 0.809862 | 1.533836e-50 | -8.615850e-47 |
Msa0051740 | Msa0796440 | 0.818769 | 1.648778e-52 | -8.615850e-47 |
Msa0051750 | Msa0796440 | 0.821992 | 3.005838e-53 | -8.615850e-47 |
Msa0054820 | Msa0796440 | 0.837363 | 5.434391e-57 | -8.615850e-47 |
Msa0056030 | Msa0796440 | 0.806603 | 7.592847e-50 | -8.615850e-47 |
Msa0056270 | Msa0796440 | 0.813891 | 2.034186e-51 | -8.615850e-47 |
Msa0058310 | Msa0796440 | 0.802733 | 4.876026e-49 | -8.615850e-47 |
Msa0074750 | Msa0796440 | 0.805631 | 1.216342e-49 | -8.615850e-47 |
Msa0077900 | Msa0796440 | 0.829550 | 4.834482e-55 | -8.615850e-47 |
Msa0078480 | Msa0796440 | 0.806778 | 6.973221e-50 | -8.615850e-47 |
Msa0079920 | Msa0796440 | 0.816142 | 6.439826e-52 | -8.615850e-47 |
Msa0085960 | Msa0796440 | 0.806045 | 9.953645e-50 | -8.615850e-47 |
Msa0086840 | Msa0796440 | 0.815105 | 1.096306e-51 | -8.615850e-47 |
Msa0090030 | Msa0796440 | 0.810973 | 8.830323e-51 | -8.615850e-47 |
Msa0096580 | Msa0796440 | 0.803890 | 2.808918e-49 | -8.615850e-47 |
Msa0097950 | Msa0796440 | 0.874252 | 7.808832e-68 | -8.615850e-47 |
Msa0098740 | Msa0796440 | 0.806304 | 8.779563e-50 | -8.615850e-47 |
Msa0100160 | Msa0796440 | 0.843504 | 1.345737e-58 | -8.615850e-47 |
Msa0105520 | Msa0796440 | 0.807227 | 5.602534e-50 | -8.615850e-47 |
Msa0108870 | Msa0796440 | 0.815302 | 9.911823e-52 | -8.615850e-47 |
Msa0116080 | Msa0796440 | 0.809948 | 1.470100e-50 | -8.615850e-47 |
Msa0610250 | Msa0796440 | 0.801966 | 7.017720e-49 | -8.615850e-47 |
Msa0610500 | Msa0796440 | 0.813398 | 2.612442e-51 | -8.615850e-47 |
Msa0612960 | Msa0796440 | 0.812320 | 4.499840e-51 | -8.615850e-47 |
Msa0614510 | Msa0796440 | 0.801127 | 1.042683e-48 | -8.615850e-47 |
Msa0617660 | Msa0796440 | 0.809676 | 1.681932e-50 | -8.615850e-47 |
Msa0618950 | Msa0796440 | 0.855031 | 8.283396e-62 | -8.615850e-47 |
Msa0618970 | Msa0796440 | 0.840078 | 1.079760e-57 | -8.615850e-47 |
Msa0620230 | Msa0796440 | 0.806644 | 7.440990e-50 | -8.615850e-47 |
Msa0620330 | Msa0796440 | 0.813422 | 2.580997e-51 | -8.615850e-47 |
Msa0622120 | Msa0796440 | 0.815375 | 9.547976e-52 | -8.615850e-47 |
Msa0624060 | Msa0796440 | 0.820483 | 6.696797e-53 | -8.615850e-47 |
Msa0628420 | Msa0796440 | 0.823765 | 1.161045e-53 | -8.615850e-47 |
Msa0628500 | Msa0796440 | 0.835143 | 1.991539e-56 | -8.615850e-47 |
Msa0641140 | Msa0796440 | 0.832537 | 8.935128e-56 | -8.615850e-47 |
Msa0647930 | Msa0796440 | 0.812022 | 5.224393e-51 | -8.615850e-47 |
Msa0647950 | Msa0796440 | 0.807343 | 5.293579e-50 | -8.615850e-47 |
Msa0651150 | Msa0796440 | 0.811812 | 5.805612e-51 | -8.615850e-47 |
Msa0652300 | Msa0796440 | 0.818369 | 2.032322e-52 | -8.615850e-47 |
Msa0652450 | Msa0796440 | 0.804710 | 1.895721e-49 | -8.615850e-47 |
Msa0652690 | Msa0796440 | 0.847117 | 1.416396e-59 | -8.615850e-47 |
Msa0656580 | Msa0796440 | 0.833279 | 5.843882e-56 | -8.615850e-47 |
Msa0656960 | Msa0796440 | 0.827194 | 1.790214e-54 | -8.615850e-47 |
Msa0667770 | Msa0796440 | 0.807256 | 5.522905e-50 | -8.615850e-47 |
Msa0667790 | Msa0796440 | 0.819243 | 1.286693e-52 | -8.615850e-47 |
Msa0673270 | Msa0796440 | 0.816102 | 6.573544e-52 | -8.615850e-47 |
Msa0675990 | Msa0796440 | 0.818996 | 1.464572e-52 | -8.615850e-47 |
Msa0676130 | Msa0796440 | 0.811964 | 5.378492e-51 | -8.615850e-47 |
Msa0676180 | Msa0796440 | 0.806772 | 6.994617e-50 | -8.615850e-47 |
Msa0679680 | Msa0796440 | 0.804388 | 2.212938e-49 | -8.615850e-47 |
Msa0686080 | Msa0796440 | 0.825238 | 5.227829e-54 | -8.615850e-47 |
Msa0689250 | Msa0796440 | 0.812322 | 4.494145e-51 | -8.615850e-47 |
Msa0691290 | Msa0796440 | 0.810974 | 8.825871e-51 | -8.615850e-47 |
Msa0694840 | Msa0796440 | 0.818953 | 1.497562e-52 | -8.615850e-47 |
Msa0695130 | Msa0796440 | 0.822825 | 1.925742e-53 | -8.615850e-47 |
Msa0697720 | Msa0796440 | 0.810767 | 9.787811e-51 | -8.615850e-47 |
Msa0700650 | Msa0796440 | 0.801880 | 7.309013e-49 | -8.615850e-47 |
Msa0700860 | Msa0796440 | 0.804783 | 1.830238e-49 | -8.615850e-47 |
Msa0700920 | Msa0796440 | 0.805465 | 1.317667e-49 | -8.615850e-47 |
Msa0703440 | Msa0796440 | 0.807478 | 4.956434e-50 | -8.615850e-47 |
Msa0705390 | Msa0796440 | 0.818391 | 2.008432e-52 | -8.615850e-47 |
Msa0709160 | Msa0796440 | 0.801791 | 7.621613e-49 | -8.615850e-47 |
Msa0710270 | Msa0796440 | 0.827330 | 1.660735e-54 | -8.615850e-47 |
Msa0712560 | Msa0796440 | 0.839242 | 1.781821e-57 | -8.615850e-47 |
Msa0726080 | Msa0796440 | 0.843674 | 1.212017e-58 | -8.615850e-47 |
Msa0743530 | Msa0796440 | 0.802460 | 5.550582e-49 | -8.615850e-47 |
Msa0744090 | Msa0796440 | 0.825919 | 3.604545e-54 | -8.615850e-47 |
Msa0744100 | Msa0796440 | 0.860458 | 2.036255e-63 | -8.615850e-47 |
Msa0748430 | Msa0796440 | 0.872386 | 3.311018e-67 | -8.615850e-47 |
Msa0752700 | Msa0796440 | 0.833351 | 5.605571e-56 | -8.615850e-47 |
Msa0753990 | Msa0796440 | -0.803390 | 3.566815e-49 | -8.615850e-47 |
Msa0756110 | Msa0796440 | 0.805853 | 1.092035e-49 | -8.615850e-47 |
Msa0756930 | Msa0796440 | 0.804676 | 1.926961e-49 | -8.615850e-47 |
Msa0766580 | Msa0796440 | 0.802167 | 6.379141e-49 | -8.615850e-47 |
Msa0773590 | Msa0796440 | 0.810113 | 1.354793e-50 | -8.615850e-47 |
Msa0777990 | Msa0796440 | 0.805057 | 1.603731e-49 | -8.615850e-47 |
Msa0781020 | Msa0796440 | 0.813997 | 1.927814e-51 | -8.615850e-47 |
Msa0787150 | Msa0796440 | 0.815167 | 1.061885e-51 | -8.615850e-47 |
Msa0788110 | Msa0796440 | 0.836521 | 8.912103e-57 | -8.615850e-47 |
Msa0788120 | Msa0796440 | 0.864872 | 8.896264e-65 | -8.615850e-47 |
Msa0794970 | Msa0796440 | 0.815029 | 1.139877e-51 | -8.615850e-47 |
Msa0796440 | Msa0811040 | 0.823186 | 1.585873e-53 | -8.615850e-47 |
Msa0796440 | Msa0820250 | 0.827813 | 1.271523e-54 | -8.615850e-47 |
Msa0796440 | Msa0825270 | 0.852327 | 4.963531e-61 | -8.615850e-47 |
Msa0796440 | Msa0825280 | 0.833194 | 6.135407e-56 | -8.615850e-47 |
Msa0796440 | Msa0827280 | 0.815234 | 1.026288e-51 | -8.615850e-47 |
Msa0796440 | Msa0828680 | 0.876488 | 1.342355e-68 | -8.615850e-47 |
Msa0796440 | Msa0829220 | 0.833454 | 5.282833e-56 | -8.615850e-47 |
Msa0796440 | Msa0831100 | 0.831359 | 1.745955e-55 | -8.615850e-47 |
Msa0796440 | Msa0834260 | 0.856155 | 3.894865e-62 | -8.615850e-47 |
Msa0796440 | Msa0836500 | 0.808380 | 3.186694e-50 | -8.615850e-47 |
Msa0796440 | Msa0844230 | 0.801014 | 1.099297e-48 | -8.615850e-47 |
Msa0796440 | Msa0846230 | 0.840080 | 1.078128e-57 | -8.615850e-47 |
Msa0796440 | Msa0851470 | 0.828126 | 1.069229e-54 | -8.615850e-47 |
Msa0796440 | Msa0853120 | 0.807156 | 5.801099e-50 | -8.615850e-47 |
Msa0796440 | Msa0856090 | 0.802515 | 5.409738e-49 | -8.615850e-47 |
Msa0796440 | Msa0859180 | 0.833822 | 4.276707e-56 | -8.615850e-47 |
Msa0796440 | Msa0864420 | 0.853330 | 2.566415e-61 | -8.615850e-47 |
Msa0796440 | Msa0866400 | 0.810609 | 1.058675e-50 | -8.615850e-47 |
Msa0796440 | Msa0869100 | 0.812642 | 3.825892e-51 | -8.615850e-47 |
Msa0796440 | Msa0873860 | 0.811570 | 6.553104e-51 | -8.615850e-47 |
Msa0796440 | Msa0880450 | 0.810429 | 1.157787e-50 | -8.615850e-47 |
Msa0796440 | Msa0881580 | 0.810459 | 1.140586e-50 | -8.615850e-47 |
Msa0796440 | Msa0888940 | 0.811170 | 8.005667e-51 | -8.615850e-47 |
Msa0796440 | Msa0897080 | 0.813008 | 3.180306e-51 | -8.615850e-47 |
Msa0796440 | Msa0897400 | 0.823100 | 1.660767e-53 | -8.615850e-47 |
Msa0796440 | Msa0899350 | 0.815389 | 9.478268e-52 | -8.615850e-47 |
Msa0796440 | Msa0906690 | 0.846480 | 2.115737e-59 | -8.615850e-47 |
Msa0796440 | Msa0933310 | 0.801764 | 7.719374e-49 | -8.615850e-47 |
Msa0796440 | Msa0937050 | 0.819816 | 9.522250e-53 | -8.615850e-47 |
Msa0796440 | Msa0939000 | 0.845996 | 2.865438e-59 | -8.615850e-47 |
Msa0796440 | Msa0945240 | 0.852494 | 4.449971e-61 | -8.615850e-47 |
Msa0796440 | Msa0957870 | 0.831857 | 1.316304e-55 | -8.615850e-47 |
Msa0796440 | Msa0957970 | 0.830165 | 3.424333e-55 | -8.615850e-47 |
Msa0796440 | Msa0959910 | 0.811880 | 5.611007e-51 | -8.615850e-47 |
Msa0796440 | Msa0963020 | 0.812827 | 3.485708e-51 | -8.615850e-47 |
Msa0796440 | Msa0965020 | 0.827290 | 1.698029e-54 | -8.615850e-47 |
Msa0796440 | Msa0968440 | 0.831728 | 1.416242e-55 | -8.615850e-47 |
Msa0796440 | Msa0970600 | 0.803472 | 3.430170e-49 | -8.615850e-47 |
Msa0796440 | Msa0974370 | 0.811075 | 8.392173e-51 | -8.615850e-47 |
Msa0796440 | Msa0980540 | 0.805557 | 1.260040e-49 | -8.615850e-47 |
Msa0796440 | Msa0980940 | 0.808830 | 2.554542e-50 | -8.615850e-47 |
Msa0796440 | Msa0981430 | 0.820092 | 8.234711e-53 | -8.615850e-47 |
Msa0796440 | Msa1014420 | 0.804628 | 1.971962e-49 | -8.615850e-47 |
Msa0796440 | Msa1025260 | 0.808235 | 3.421523e-50 | -8.615850e-47 |
Msa0796440 | Msa1025940 | 0.804274 | 2.337266e-49 | -8.615850e-47 |
Msa0796440 | Msa1039760 | 0.820856 | 5.498101e-53 | -8.615850e-47 |
Msa0796440 | Msa1041210 | 0.840733 | 7.279324e-58 | -8.615850e-47 |
Msa0796440 | Msa1041520 | 0.819836 | 9.421221e-53 | -8.615850e-47 |
Msa0796440 | Msa1072600 | 0.800947 | 1.134924e-48 | -8.615850e-47 |
Msa0796440 | Msa1072700 | 0.830866 | 2.306684e-55 | -8.615850e-47 |
Msa0796440 | Msa1081560 | 0.821899 | 3.158775e-53 | -8.615850e-47 |
Msa0796440 | Msa1109350 | 0.815422 | 9.322795e-52 | -8.615850e-47 |
Msa0796440 | Msa1112390 | 0.834807 | 2.420620e-56 | -8.615850e-47 |
Msa0796440 | Msa1128330 | 0.867115 | 1.736193e-65 | -8.615850e-47 |
Msa0796440 | Msa1130530 | 0.819483 | 1.134100e-52 | -8.615850e-47 |
Msa0796440 | Msa1133400 | 0.833676 | 4.650853e-56 | -8.615850e-47 |
Msa0796440 | Msa1165220 | 0.816336 | 5.828658e-52 | -8.615850e-47 |
Msa0796440 | Msa1165740 | 0.815933 | 7.171599e-52 | -8.615850e-47 |
Msa0796440 | Msa1166410 | 0.809062 | 2.277731e-50 | -8.615850e-47 |
Msa0796440 | Msa1174850 | 0.816477 | 5.420004e-52 | -8.615850e-47 |
Msa0796440 | Msa1178050 | 0.821742 | 3.434972e-53 | -8.615850e-47 |
Msa0796440 | Msa1179950 | 0.800226 | 1.591459e-48 | -8.615850e-47 |
Msa0796440 | Msa1182670 | 0.843761 | 1.148834e-58 | -8.615850e-47 |
Msa0796440 | Msa1186130 | 0.808905 | 2.461857e-50 | -8.615850e-47 |
Msa0796440 | Msa1199570 | 0.805414 | 1.350498e-49 | -8.615850e-47 |
Msa0796440 | Msa1203100 | 0.828544 | 8.476360e-55 | -8.615850e-47 |
Msa0796440 | Msa1205370 | 0.828200 | 1.026256e-54 | -8.615850e-47 |
Msa0796440 | Msa1206160 | 0.800132 | 1.663646e-48 | -8.615850e-47 |
Msa0796440 | Msa1206650 | 0.806447 | 8.191328e-50 | -8.615850e-47 |
Msa0796440 | Msa1211340 | 0.812809 | 3.516175e-51 | -8.615850e-47 |
Msa0796440 | Msa1214890 | 0.809210 | 2.117780e-50 | -8.615850e-47 |
Msa0796440 | Msa1225600 | 0.801702 | 7.947802e-49 | -8.615850e-47 |
Msa0796440 | Msa1230040 | 0.849529 | 3.050293e-60 | -8.615850e-47 |
Msa0796440 | Msa1240510 | 0.800594 | 1.339495e-48 | -8.615850e-47 |
Msa0796440 | Msa1250110 | 0.814199 | 1.740045e-51 | -8.615850e-47 |
Msa0796440 | Msa1250290 | 0.814725 | 1.330940e-51 | -8.615850e-47 |
Msa0796440 | Msa1250730 | 0.807243 | 5.559232e-50 | -8.615850e-47 |
Msa0796440 | Msa1255370 | 0.851839 | 6.833694e-61 | -8.615850e-47 |
Msa0796440 | Msa1257070 | 0.808740 | 2.670001e-50 | -8.615850e-47 |
Msa0796440 | Msa1259640 | 0.817966 | 2.507079e-52 | -8.615850e-47 |
Msa0796440 | Msa1272600 | 0.837607 | 4.704684e-57 | -8.615850e-47 |
Msa0796440 | Msa1290450 | 0.810468 | 1.135530e-50 | -8.615850e-47 |
Msa0796440 | Msa1295910 | 0.886126 | 4.484233e-72 | -8.615850e-47 |
Msa0796440 | Msa1304940 | 0.819899 | 9.114590e-53 | -8.615850e-47 |
Msa0796440 | Msa1305660 | 0.806918 | 6.514520e-50 | -8.615850e-47 |
Msa0796440 | Msa1307180 | 0.805724 | 1.162757e-49 | -8.615850e-47 |
Msa0796440 | Msa1310450 | 0.832934 | 7.118598e-56 | -8.615850e-47 |
Msa0796440 | Msa1315750 | 0.837693 | 4.472563e-57 | -8.615850e-47 |
Msa0796440 | Msa1328640 | 0.808537 | 2.949486e-50 | -8.615850e-47 |
Msa0796440 | Msa1328710 | 0.808967 | 2.387499e-50 | -8.615850e-47 |
Msa0796440 | Msa1329790 | 0.817466 | 3.250644e-52 | -8.615850e-47 |
Msa0796440 | Msa1331910 | 0.812348 | 4.434777e-51 | -8.615850e-47 |
Msa0796440 | Msa1332760 | 0.809986 | 1.442895e-50 | -8.615850e-47 |
Msa0796440 | Msa1340810 | 0.828014 | 1.137792e-54 | -8.615850e-47 |
Msa0796440 | Msa1340830 | 0.825001 | 5.946607e-54 | -8.615850e-47 |
Msa0796440 | Msa1341490 | 0.816754 | 4.697967e-52 | -8.615850e-47 |
Msa0796440 | Msa1344310 | 0.838160 | 3.391902e-57 | -8.615850e-47 |
Msa0796440 | Msa1349520 | 0.812857 | 3.432328e-51 | -8.615850e-47 |
Msa0796440 | Msa1356610 | 0.831252 | 1.855073e-55 | -8.615850e-47 |
Msa0796440 | Msa1359560 | 0.838494 | 2.782363e-57 | -8.615850e-47 |
Msa0796440 | Msa1366600 | 0.808505 | 2.996968e-50 | -8.615850e-47 |
Msa0796440 | Msa1371240 | 0.832951 | 7.052192e-56 | -8.615850e-47 |
Msa0796440 | Msa1371640 | 0.867328 | 1.484538e-65 | -8.615850e-47 |
Msa0796440 | Msa1375840 | 0.814113 | 1.817612e-51 | -8.615850e-47 |
Msa0796440 | Msa1376200 | 0.878222 | 3.343603e-69 | -8.615850e-47 |
Msa0796440 | Msa1378410 | 0.816223 | 6.178980e-52 | -8.615850e-47 |
Msa0796440 | Msa1383740 | 0.836141 | 1.113534e-56 | -8.615850e-47 |
Msa0796440 | Msa1385810 | 0.847917 | 8.537843e-60 | -8.615850e-47 |
Msa0796440 | Msa1396870 | 0.883561 | 4.044130e-71 | -8.615850e-47 |
Msa0796440 | Msa1400120 | 0.825749 | 3.955572e-54 | -8.615850e-47 |
Msa0796440 | Msa1407190 | 0.822768 | 1.985549e-53 | -8.615850e-47 |
Msa0796440 | Msa1409260 | 0.840646 | 7.671095e-58 | -8.615850e-47 |
Msa0796440 | Msa1411950 | 0.817085 | 3.958644e-52 | -8.615850e-47 |
Msa0796440 | Msa1413380 | 0.803166 | 3.969149e-49 | -8.615850e-47 |
Msa0796440 | Msa1416260 | 0.819024 | 1.443272e-52 | -8.615850e-47 |
Msa0796440 | Msa1426350 | 0.822765 | 1.987837e-53 | -8.615850e-47 |
Msa0796440 | Msa1426570 | 0.817651 | 2.952854e-52 | -8.615850e-47 |
Msa0796440 | Msa1432130 | 0.824007 | 1.018958e-53 | -8.615850e-47 |
Msa0796440 | Msa1435770 | 0.894041 | 3.580580e-75 | -8.615850e-47 |
Msa0796440 | Msa1437330 | 0.825938 | 3.567495e-54 | -8.615850e-47 |
Msa0796440 | Msa1442790 | 0.829575 | 4.766782e-55 | -8.615850e-47 |
Msa0796440 | Msa1448490 | 0.827691 | 1.360170e-54 | -8.615850e-47 |
Msa0796440 | Msa1450720 | 0.818846 | 1.583846e-52 | -8.615850e-47 |
Msa0796440 | Msa1452480 | 0.811449 | 6.961746e-51 | -8.615850e-47 |
Msa0796440 | Msa1458810 | 0.819327 | 1.230986e-52 | -8.615850e-47 |
Msa0796440 | Msa1463600 | 0.817083 | 3.962673e-52 | -8.615850e-47 |
Msa0125450 | Msa0796440 | 0.822155 | 2.756180e-53 | -8.615850e-47 |
Msa0125540 | Msa0796440 | 0.830182 | 3.390924e-55 | -8.615850e-47 |
Msa0125880 | Msa0796440 | 0.859491 | 3.986598e-63 | -8.615850e-47 |
Msa0127850 | Msa0796440 | 0.827371 | 1.623152e-54 | -8.615850e-47 |
Msa0132830 | Msa0796440 | 0.865446 | 5.871400e-65 | -8.615850e-47 |
Msa0133630 | Msa0796440 | 0.808352 | 3.230351e-50 | -8.615850e-47 |
Msa0133720 | Msa0796440 | 0.811747 | 5.999084e-51 | -8.615850e-47 |
Msa0136120 | Msa0796440 | 0.835656 | 1.477919e-56 | -8.615850e-47 |
Msa0138210 | Msa0796440 | 0.815490 | 9.003539e-52 | -8.615850e-47 |
Msa0138640 | Msa0796440 | 0.804499 | 2.098010e-49 | -8.615850e-47 |
Msa0138750 | Msa0796440 | 0.811900 | 5.554594e-51 | -8.615850e-47 |
Msa0142500 | Msa0796440 | 0.806683 | 7.303700e-50 | -8.615850e-47 |
Msa0142950 | Msa0796440 | 0.805227 | 1.477985e-49 | -8.615850e-47 |
Msa0143850 | Msa0796440 | 0.812681 | 3.751377e-51 | -8.615850e-47 |
Msa0145740 | Msa0796440 | 0.806080 | 9.788003e-50 | -8.615850e-47 |
Msa0146080 | Msa0796440 | 0.819565 | 1.086364e-52 | -8.615850e-47 |
Msa0156230 | Msa0796440 | 0.825123 | 5.564332e-54 | -8.615850e-47 |
Msa0168870 | Msa0796440 | 0.812671 | 3.770468e-51 | -8.615850e-47 |
Msa0170570 | Msa0796440 | 0.848618 | 5.464162e-60 | -8.615850e-47 |
Msa0177210 | Msa0796440 | 0.827737 | 1.326479e-54 | -8.615850e-47 |
Msa0183050 | Msa0796440 | 0.813265 | 2.793161e-51 | -8.615850e-47 |
Msa0183420 | Msa0796440 | 0.819176 | 1.332519e-52 | -8.615850e-47 |
Msa0186950 | Msa0796440 | 0.803517 | 3.356728e-49 | -8.615850e-47 |
Msa0197610 | Msa0796440 | 0.817347 | 3.456427e-52 | -8.615850e-47 |
Msa0198520 | Msa0796440 | 0.835158 | 1.974201e-56 | -8.615850e-47 |
Msa0198530 | Msa0796440 | 0.851067 | 1.129387e-60 | -8.615850e-47 |
Msa0207030 | Msa0796440 | 0.824111 | 9.636451e-54 | -8.615850e-47 |
Msa0216240 | Msa0796440 | 0.814474 | 1.512434e-51 | -8.615850e-47 |
Msa0218350 | Msa0796440 | 0.838685 | 2.483019e-57 | -8.615850e-47 |
Msa0224030 | Msa0796440 | 0.801406 | 9.139555e-49 | -8.615850e-47 |
Msa0230680 | Msa0796440 | 0.814592 | 1.424690e-51 | -8.615850e-47 |
Msa0237200 | Msa0796440 | 0.831036 | 2.095416e-55 | -8.615850e-47 |
Msa0237410 | Msa0796440 | 0.805804 | 1.118299e-49 | -8.615850e-47 |
Msa0376020 | Msa0796440 | 0.818059 | 2.388382e-52 | -8.615850e-47 |
Msa0376280 | Msa0796440 | 0.822260 | 2.604746e-53 | -8.615850e-47 |
Msa0378970 | Msa0796440 | 0.851172 | 1.054826e-60 | -8.615850e-47 |
Msa0381000 | Msa0796440 | 0.805987 | 1.023692e-49 | -8.615850e-47 |
Msa0381080 | Msa0796440 | 0.811294 | 7.522294e-51 | -8.615850e-47 |
Msa0389910 | Msa0796440 | 0.810699 | 1.012499e-50 | -8.615850e-47 |
Msa0392200 | Msa0796440 | 0.804447 | 2.151224e-49 | -8.615850e-47 |
Msa0408300 | Msa0796440 | 0.802119 | 6.524504e-49 | -8.615850e-47 |
Msa0410300 | Msa0796440 | 0.804025 | 2.633462e-49 | -8.615850e-47 |
Msa0416960 | Msa0796440 | 0.800963 | 1.126215e-48 | -8.615850e-47 |
Msa0428170 | Msa0796440 | 0.827976 | 1.161868e-54 | -8.615850e-47 |
Msa0428580 | Msa0796440 | 0.824420 | 8.149007e-54 | -8.615850e-47 |
Msa0432500 | Msa0796440 | 0.828436 | 9.002484e-55 | -8.615850e-47 |
Msa0435220 | Msa0796440 | 0.817481 | 3.225261e-52 | -8.615850e-47 |
Msa0461590 | Msa0796440 | 0.811548 | 6.627508e-51 | -8.615850e-47 |
Msa0462390 | Msa0796440 | 0.801633 | 8.212162e-49 | -8.615850e-47 |
Msa0462480 | Msa0796440 | 0.805353 | 1.390478e-49 | -8.615850e-47 |
Msa0467780 | Msa0796440 | 0.803187 | 3.928863e-49 | -8.615850e-47 |
Msa0474700 | Msa0796440 | 0.815589 | 8.555851e-52 | -8.615850e-47 |
Msa0474940 | Msa0796440 | 0.838428 | 2.892747e-57 | -8.615850e-47 |
Msa0480780 | Msa0796440 | 0.852626 | 4.080578e-61 | -8.615850e-47 |
Msa0482040 | Msa0796440 | 0.800545 | 1.370739e-48 | -8.615850e-47 |
Msa0239450 | Msa0796440 | 0.801227 | 9.944454e-49 | -8.615850e-47 |
Msa0240300 | Msa0796440 | 0.823939 | 1.057401e-53 | -8.615850e-47 |
Msa0241540 | Msa0796440 | 0.801694 | 7.977169e-49 | -8.615850e-47 |
Msa0244980 | Msa0796440 | 0.800232 | 1.586958e-48 | -8.615850e-47 |
Msa0247060 | Msa0796440 | 0.844811 | 5.999130e-59 | -8.615850e-47 |
Msa0259270 | Msa0796440 | 0.810848 | 9.397746e-51 | -8.615850e-47 |
Msa0267870 | Msa0796440 | 0.804629 | 1.970599e-49 | -8.615850e-47 |
Msa0271810 | Msa0796440 | 0.802370 | 5.794568e-49 | -8.615850e-47 |
Msa0274970 | Msa0796440 | 0.820288 | 7.424047e-53 | -8.615850e-47 |
Msa0276920 | Msa0796440 | 0.804199 | 2.422229e-49 | -8.615850e-47 |
Msa0278090 | Msa0796440 | 0.831565 | 1.553043e-55 | -8.615850e-47 |
Msa0278790 | Msa0796440 | 0.824538 | 7.644189e-54 | -8.615850e-47 |
Msa0285330 | Msa0796440 | 0.865597 | 5.261531e-65 | -8.615850e-47 |
Msa0295590 | Msa0796440 | 0.813772 | 2.160946e-51 | -8.615850e-47 |
Msa0308440 | Msa0796440 | 0.823386 | 1.424140e-53 | -8.615850e-47 |
Msa0315680 | Msa0796440 | 0.820725 | 5.892915e-53 | -8.615850e-47 |
Msa0316940 | Msa0796440 | 0.830883 | 2.285456e-55 | -8.615850e-47 |
Msa0318720 | Msa0796440 | 0.835959 | 1.238764e-56 | -8.615850e-47 |
Msa0324240 | Msa0796440 | 0.909555 | 5.006088e-82 | -8.615850e-47 |
Msa0333920 | Msa0796440 | 0.801918 | 7.176418e-49 | -8.615850e-47 |
Msa0336250 | Msa0796440 | 0.800546 | 1.369929e-48 | -8.615850e-47 |
Msa0343190 | Msa0796440 | 0.817263 | 3.610908e-52 | -8.615850e-47 |
Msa0347950 | Msa0796440 | 0.815476 | 9.067684e-52 | -8.615850e-47 |
Msa0347990 | Msa0796440 | 0.804380 | 2.221249e-49 | -8.615850e-47 |
Msa0363060 | Msa0796440 | 0.828215 | 1.017476e-54 | -8.615850e-47 |
Msa0363620 | Msa0796440 | 0.803705 | 3.068930e-49 | -8.615850e-47 |
Msa0363640 | Msa0796440 | 0.804356 | 2.246897e-49 | -8.615850e-47 |
Msa0484840 | Msa0796440 | 0.871621 | 5.943990e-67 | -8.615850e-47 |
Msa0486130 | Msa0796440 | 0.814049 | 1.877910e-51 | -8.615850e-47 |
Msa0504780 | Msa0796440 | 0.812594 | 3.919231e-51 | -8.615850e-47 |
Msa0506830 | Msa0796440 | 0.805405 | 1.356409e-49 | -8.615850e-47 |
Msa0514180 | Msa0796440 | 0.807435 | 5.061198e-50 | -8.615850e-47 |
Msa0516020 | Msa0796440 | 0.818046 | 2.404092e-52 | -8.615850e-47 |
Msa0523050 | Msa0796440 | 0.843188 | 1.634262e-58 | -8.615850e-47 |
Msa0526020 | Msa0796440 | 0.824339 | 8.518393e-54 | -8.615850e-47 |
Msa0527360 | Msa0796440 | 0.805824 | 1.107935e-49 | -8.615850e-47 |
Msa0531250 | Msa0796440 | 0.821103 | 4.823763e-53 | -8.615850e-47 |
Msa0538800 | Msa0796440 | 0.806269 | 8.927862e-50 | -8.615850e-47 |
Msa0545060 | Msa0796440 | 0.807309 | 5.383737e-50 | -8.615850e-47 |
Msa0550570 | Msa0796440 | 0.800456 | 1.428887e-48 | -8.615850e-47 |
Msa0552680 | Msa0796440 | 0.801628 | 8.231723e-49 | -8.615850e-47 |
Msa0556790 | Msa0796440 | 0.824954 | 6.099165e-54 | -8.615850e-47 |
Msa0556860 | Msa0796440 | 0.849249 | 3.649587e-60 | -8.615850e-47 |
Msa0557070 | Msa0796440 | 0.808751 | 2.654657e-50 | -8.615850e-47 |
Msa0557320 | Msa0796440 | 0.823152 | 1.615327e-53 | -8.615850e-47 |
Msa0558230 | Msa0796440 | 0.818089 | 2.351092e-52 | -8.615850e-47 |
Msa0560500 | Msa0796440 | 0.826250 | 3.006763e-54 | -8.615850e-47 |
Msa0564130 | Msa0796440 | 0.846874 | 1.651017e-59 | -8.615850e-47 |
Msa0566350 | Msa0796440 | 0.833208 | 6.086860e-56 | -8.615850e-47 |
Msa0566750 | Msa0796440 | 0.832357 | 9.897245e-56 | -8.615850e-47 |
Msa0574390 | Msa0796440 | 0.803971 | 2.702632e-49 | -8.615850e-47 |
Msa0576680 | Msa0796440 | 0.830779 | 2.422661e-55 | -8.615850e-47 |
Msa0588090 | Msa0796440 | 0.845460 | 4.006809e-59 | -8.615850e-47 |
Msa0588120 | Msa0796440 | 0.813530 | 2.443285e-51 | -8.615850e-47 |
Msa0600600 | Msa0796440 | 0.826108 | 3.251275e-54 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0796440 | MtrunA17_Chr5g0399351 | 97.443 | 352 | 8 | 1 | 52 | 403 | 1 | 351 | 0.0 | 676 |
Msa0796440 | MtrunA17_Chr2g0317181 | 85.227 | 88 | 13 | 0 | 272 | 359 | 4 | 91 | 1.37e-42 | 144 |
Msa0796440 | MtrunA17_Chr2g0317191 | 63.636 | 99 | 34 | 2 | 55 | 151 | 5 | 103 | 4.78e-28 | 106 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0796440 | AT5G05210.1 | 49.459 | 370 | 132 | 8 | 74 | 399 | 24 | 382 | 2.07e-91 | 281 |
Msa0796440 | AT5G05210.2 | 49.459 | 370 | 132 | 8 | 74 | 399 | 16 | 374 | 2.24e-91 | 280 |
Msa0796440 | AT2G27750.1 | 52.571 | 175 | 62 | 4 | 220 | 390 | 24 | 181 | 1.25e-44 | 153 |
Find 113 sgRNAs with CRISPR-Local
Find 314 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TATTAACCCATGTTATATTT+TGG | 0.153792 | 5_3:-8483334 | Msa0796440:three_prime_UTR |
GTGATTGGGATTTAGAAATT+AGG | 0.196108 | 5_3:+8485389 | None:intergenic |
TCACTAGAATACAGGCATTT+TGG | 0.215580 | 5_3:-8483275 | Msa0796440:three_prime_UTR |
GCGGTGGATGACGGCGGGTT+CGG | 0.215825 | 5_3:+8485343 | None:intergenic |
TAACGAGAAACCGTGGTTTC+AGG | 0.232330 | 5_3:-8484375 | Msa0796440:CDS |
GCCTGTATTCTAGTGATAAA+TGG | 0.241539 | 5_3:+8483282 | None:intergenic |
TGAACTTCTCAAGAAGAGTT+TGG | 0.258601 | 5_3:-8484249 | Msa0796440:CDS |
AGAAGTTCAAGTGTGGTTAC+AGG | 0.290349 | 5_3:+8484263 | None:intergenic |
CGGTGGATGACGGCGGGTTC+GGG | 0.307231 | 5_3:+8485344 | None:intergenic |
TGATTGGGATTTAGAAATTA+GGG | 0.336302 | 5_3:+8485390 | None:intergenic |
TATCATCATGGCAGATTTAC+CGG | 0.336518 | 5_3:-8483208 | Msa0796440:three_prime_UTR |
GCAGCAATGGACAGAGCTTC+AGG | 0.337717 | 5_3:-8483744 | Msa0796440:CDS |
AGTGTGGTTACAGGCTTCTC+AGG | 0.342543 | 5_3:+8484272 | None:intergenic |
GTTTGGTCACGTTAAACTTC+AGG | 0.346929 | 5_3:-8483898 | Msa0796440:CDS |
GAACTTCTCAAGAAGAGTTT+GGG | 0.346980 | 5_3:-8484248 | Msa0796440:CDS |
AGGTGCGGGCTTACTTTCAT+TGG | 0.357636 | 5_3:+8483980 | None:intergenic |
ACGGCGAAAGGCGGAGTGAT+TGG | 0.358119 | 5_3:+8485374 | None:intergenic |
CAAGCTTGCGATGAAGCCTT+TGG | 0.361638 | 5_3:+8484123 | None:intergenic |
TCCATTTATCACTAGAATAC+AGG | 0.366047 | 5_3:-8483283 | Msa0796440:three_prime_UTR |
ACAGAATATCAAGAAGTCTA+AGG | 0.367209 | 5_3:-8484309 | Msa0796440:CDS |
CTATTGCGGCCGGGCTTTGA+AGG | 0.371671 | 5_3:-8483516 | Msa0796440:CDS |
TTCTCTTGTAGCTTCTCATC+AGG | 0.381853 | 5_3:+8483960 | None:intergenic |
CAAGAGAGGATATCATTATC+AGG | 0.385515 | 5_3:-8484030 | Msa0796440:CDS |
GGACAGAGCTTCAGGAATTA+AGG | 0.391083 | 5_3:-8483736 | Msa0796440:CDS |
TGTTGATGTTGGTCAAGATT+TGG | 0.391866 | 5_3:-8484480 | Msa0796440:CDS |
GTTTGTTAATTACATATTGT+TGG | 0.393542 | 5_3:-8483240 | Msa0796440:three_prime_UTR |
AAATAACGAGACCATACCTT+TGG | 0.402152 | 5_3:+8485314 | None:intergenic |
GATAAAGAAAAGCATACATA+AGG | 0.405087 | 5_3:-8483694 | Msa0796440:CDS |
CGGCGAAAGGCGGAGTGATT+GGG | 0.411013 | 5_3:+8485375 | None:intergenic |
AAGCCACACGTTGAAATTGA+TGG | 0.412512 | 5_3:+8483395 | None:intergenic |
CCTCCGATAACAATGCAAAA+AGG | 0.413586 | 5_3:+8483429 | None:intergenic |
TAATCTAATGGTTAATGAAC+CGG | 0.420372 | 5_3:+8483189 | None:intergenic |
GCTTCAAAGGAGCTTGTGTT+TGG | 0.427667 | 5_3:-8483915 | Msa0796440:CDS |
GCAATAGCTTCACCCTTCTC+AGG | 0.428203 | 5_3:+8483786 | None:intergenic |
AACTCGTAACTGTGCAGATC+CGG | 0.428390 | 5_3:-8484087 | Msa0796440:CDS |
GGCCGGGCTTTGAAGGTCAC+AGG | 0.430067 | 5_3:-8483509 | Msa0796440:CDS |
CCTTTGGCGAAGCTCTTCAT+AGG | 0.445722 | 5_3:+8484139 | None:intergenic |
AACGAGAAACCGTGGTTTCA+GGG | 0.456991 | 5_3:-8484374 | Msa0796440:CDS |
ATAAAGAAAAGCATACATAA+GGG | 0.460274 | 5_3:-8483693 | Msa0796440:CDS |
GGGTGAAGCTATTGCTAAGA+AGG | 0.461254 | 5_3:-8483778 | Msa0796440:CDS |
ATGCTGTTATAGGGAGACTT+TGG | 0.465023 | 5_3:-8484542 | Msa0796440:intron |
TCGGGTCGACGGACGGCGAA+AGG | 0.472219 | 5_3:+8485362 | None:intergenic |
ATACAAATAACATAATCTAA+TGG | 0.473511 | 5_3:+8483177 | None:intergenic |
GGATGCCGCGGAGGCTTCAA+AGG | 0.475053 | 5_3:-8483928 | Msa0796440:CDS |
GTTGGCAGATAAAACTTAGC+TGG | 0.478956 | 5_3:+8484404 | None:intergenic |
AGGCTTCATCGCAAGCTTGA+AGG | 0.479052 | 5_3:-8484119 | Msa0796440:CDS |
TGTAGCTTCTCATCAGGTGC+GGG | 0.484265 | 5_3:+8483966 | None:intergenic |
GTTGCAGAGGTTGTTGATGT+TGG | 0.484416 | 5_3:-8484491 | Msa0796440:CDS |
CTGATAATGATATCCTCTCT+TGG | 0.486659 | 5_3:+8484031 | None:intergenic |
CGGAAAAGGCGGCTAAGAAG+AGG | 0.488613 | 5_3:-8484067 | Msa0796440:CDS |
TGACGGCGGGTTCGGGTCGA+CGG | 0.492264 | 5_3:+8485351 | None:intergenic |
GGGAAGAGAGAGTTCAATCA+AGG | 0.493714 | 5_3:-8483638 | Msa0796440:CDS |
AGGTGAGGAAGAAGAGGATG+TGG | 0.498717 | 5_3:-8484207 | Msa0796440:CDS |
GCTACAAGAGAAGGTGAAGA+AGG | 0.500602 | 5_3:-8483949 | Msa0796440:CDS |
ACTTGAAAGGGCTAAGAAGT+TGG | 0.501671 | 5_3:-8483829 | Msa0796440:CDS |
CCGTCCAGCTCCGACACAAA+AGG | 0.502260 | 5_3:+8484179 | None:intergenic |
AATAACGAGACCATACCTTT+GGG | 0.506636 | 5_3:+8485315 | None:intergenic |
GATGAAGATGAGGAAGCAAA+AGG | 0.510760 | 5_3:-8484516 | Msa0796440:CDS |
AAAGCACAAGGAACTTGAAA+GGG | 0.512350 | 5_3:-8483841 | Msa0796440:CDS |
GGCGGGTTCGGGTCGACGGA+CGG | 0.514432 | 5_3:+8485355 | None:intergenic |
TCAATCAAGGGATCAGTTGA+AGG | 0.518168 | 5_3:-8483625 | Msa0796440:CDS |
AAGAAGCGGTGGATGACGGC+GGG | 0.518852 | 5_3:+8485338 | None:intergenic |
TAACTGTGCAGATCCGGAAA+AGG | 0.529066 | 5_3:-8484081 | Msa0796440:CDS |
GGCTTTGAAGGTCACAGGGA+AGG | 0.530107 | 5_3:-8483504 | Msa0796440:CDS |
AGGCAGAGAAGCAAAAGAAA+AGG | 0.532776 | 5_3:-8483605 | Msa0796440:CDS |
ACTTTGGAGTGATGAAGATG+AGG | 0.541362 | 5_3:-8484526 | Msa0796440:CDS |
ACCGCTTCTTCCCAAAGGTA+TGG | 0.542345 | 5_3:-8485325 | Msa0796440:CDS |
CAAAGCACAAGGAACTTGAA+AGG | 0.542564 | 5_3:-8483842 | Msa0796440:CDS |
TCACGTTAAACTTCAGGATG+AGG | 0.542978 | 5_3:-8483892 | Msa0796440:CDS |
GAATGAAGGTGAGGAAGAAG+AGG | 0.544065 | 5_3:-8484213 | Msa0796440:CDS |
TGGGAAGAAGCGGTGGATGA+CGG | 0.547206 | 5_3:+8485334 | None:intergenic |
GGAAGCATGGAAAGCAGCAA+TGG | 0.549880 | 5_3:-8483757 | Msa0796440:CDS |
TTATCAATTTGGGATCGTCA+TGG | 0.557381 | 5_3:+8483712 | None:intergenic |
GGATTAATGATAAGAAAATG+AGG | 0.557444 | 5_3:-8483563 | Msa0796440:CDS |
GGTTTCTCGTTATCATCAGT+TGG | 0.560730 | 5_3:+8484386 | None:intergenic |
TGGTTTGCATCATATCATCA+TGG | 0.561936 | 5_3:-8483220 | Msa0796440:three_prime_UTR |
GAAGAAGAATGATCCTGAGA+AGG | 0.567162 | 5_3:-8483799 | Msa0796440:CDS |
CTTCAGGATGAGGAAATGCT+AGG | 0.569079 | 5_3:-8483882 | Msa0796440:CDS |
TCCCTGTGACCTTCAAAGCC+CGG | 0.571851 | 5_3:+8483507 | None:intergenic |
TGAAAGGGCTAAGAAGTTGG+AGG | 0.572734 | 5_3:-8483826 | Msa0796440:CDS |
TTGTAGCTTCTCATCAGGTG+CGG | 0.577217 | 5_3:+8483965 | None:intergenic |
TTGTTGAGACCCTGAAACCA+CGG | 0.583522 | 5_3:+8484365 | None:intergenic |
TGATGAGAAGCTACAAGAGA+AGG | 0.587083 | 5_3:-8483958 | Msa0796440:CDS |
GTGTGGTTACAGGCTTCTCA+GGG | 0.588570 | 5_3:+8484273 | None:intergenic |
CATCCATCAATTTCAACGTG+TGG | 0.589707 | 5_3:-8483398 | Msa0796440:three_prime_UTR |
CGGAGCTGGACGGAGATGAT+CGG | 0.591449 | 5_3:-8484169 | Msa0796440:CDS |
ACCATACCTTTGGGAAGAAG+CGG | 0.591973 | 5_3:+8485324 | None:intergenic |
GAAGCAAAAGGTTGTTGCAG+AGG | 0.592741 | 5_3:-8484504 | Msa0796440:CDS |
ATCAGGATAATAAACGCAAG+AGG | 0.601271 | 5_3:-8484013 | Msa0796440:CDS |
AAGAAGAATGATCCTGAGAA+GGG | 0.603235 | 5_3:-8483798 | Msa0796440:CDS |
CATCCACCGCTTCTTCCCAA+AGG | 0.604710 | 5_3:-8485330 | Msa0796440:CDS |
CTATTGCTAAGAAGGAAGCA+TGG | 0.605991 | 5_3:-8483770 | Msa0796440:CDS |
CTGTGCAGATCCGGAAAAGG+CGG | 0.608827 | 5_3:-8484078 | Msa0796440:CDS |
GTAATTGCCAAAATATAACA+TGG | 0.609450 | 5_3:+8483327 | None:intergenic |
GAAGGTGAAGAAGGATGCCG+CGG | 0.613578 | 5_3:-8483940 | Msa0796440:CDS |
GAAGAAGCGGTGGATGACGG+CGG | 0.614612 | 5_3:+8485337 | None:intergenic |
CTTCTTGAGAAGTTCAAGTG+TGG | 0.616015 | 5_3:+8484256 | None:intergenic |
TCTGCGAGACACAGATAATG+AGG | 0.617650 | 5_3:+8485420 | None:intergenic |
GGTCGACGGACGGCGAAAGG+CGG | 0.621188 | 5_3:+8485365 | None:intergenic |
ATACCTTTGGGAAGAAGCGG+TGG | 0.624169 | 5_3:+8485327 | None:intergenic |
TAAAGAAAAGCATACATAAG+GGG | 0.624269 | 5_3:-8483692 | Msa0796440:CDS |
TCAGGATAATAAACGCAAGA+GGG | 0.627512 | 5_3:-8484012 | Msa0796440:CDS |
GGAAGAGAGAGTTCAATCAA+GGG | 0.629511 | 5_3:-8483637 | Msa0796440:CDS |
GGAAAAGGCGGCTAAGAAGA+GGG | 0.632968 | 5_3:-8484066 | Msa0796440:CDS |
CAACAAGAAACAGAAAGCAA+AGG | 0.638546 | 5_3:-8484348 | Msa0796440:CDS |
GCCGGGCTTTGAAGGTCACA+GGG | 0.648501 | 5_3:-8483508 | Msa0796440:CDS |
GGTGAAGAAGGATGCCGCGG+AGG | 0.652339 | 5_3:-8483937 | Msa0796440:CDS |
CCTATGAAGAGCTTCGCCAA+AGG | 0.661576 | 5_3:-8484139 | Msa0796440:CDS |
TAATTGCCAAAATATAACAT+GGG | 0.683860 | 5_3:+8483328 | None:intergenic |
GAAGATAGAGACACCAAGAG+AGG | 0.685788 | 5_3:-8484044 | Msa0796440:CDS |
AAGCTCCTTTGAAGCCTCCG+CGG | 0.690454 | 5_3:+8483923 | None:intergenic |
GGTCAGATAATATAGCTGAG+AGG | 0.714827 | 5_3:-8483584 | Msa0796440:CDS |
CTGATGATAACGAGAAACCG+TGG | 0.715203 | 5_3:-8484382 | Msa0796440:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTCTTTTTAAATTGGTTTT+AGG | - | chr5_3:8483470-8483489 | Msa0796440:exon | 15.0% |
!!! | TTCTTTTTAAATTGGTTTTA+GGG | - | chr5_3:8483471-8483490 | Msa0796440:exon | 15.0% |
!!! | ATTTATTTTTTTCTTCAGTA+TGG | + | chr5_3:8483883-8483902 | None:intergenic | 15.0% |
!! | ATACAAATAACATAATCTAA+TGG | + | chr5_3:8485436-8485455 | None:intergenic | 15.0% |
!!! | TTTCTTTTTAAATTGGTTTT+AGG | - | chr5_3:8483470-8483489 | Msa0796440:exon | 15.0% |
!!! | TTCTTTTTAAATTGGTTTTA+GGG | - | chr5_3:8483471-8483490 | Msa0796440:exon | 15.0% |
!!! | ATTTATTTTTTTCTTCAGTA+TGG | + | chr5_3:8483883-8483902 | None:intergenic | 15.0% |
!! | ATACAAATAACATAATCTAA+TGG | + | chr5_3:8485436-8485455 | None:intergenic | 15.0% |
!!! | GCAAATGTTTCTTTTTAAAT+TGG | - | chr5_3:8483463-8483482 | Msa0796440:exon | 20.0% |
!! | AATCTTATACATAACATAAG+CGG | + | chr5_3:8483535-8483554 | None:intergenic | 20.0% |
!! | TAATACTAGTTATAGAGTTA+GGG | + | chr5_3:8483757-8483776 | None:intergenic | 20.0% |
!!! | ATGCTTTTCTTTATCAATTT+GGG | + | chr5_3:8484911-8484930 | None:intergenic | 20.0% |
!!! | TATGCTTTTCTTTATCAATT+TGG | + | chr5_3:8484912-8484931 | None:intergenic | 20.0% |
!!! | ATAAAGAAAAGCATACATAA+GGG | - | chr5_3:8484917-8484936 | Msa0796440:intron | 20.0% |
!!! | TATTAACCCATGTTATATTT+TGG | - | chr5_3:8485276-8485295 | Msa0796440:intron | 20.0% |
!! | TAATTGCCAAAATATAACAT+GGG | + | chr5_3:8485285-8485304 | None:intergenic | 20.0% |
!! | AATGGAAATAGTCAAAAAAA+AGG | + | chr5_3:8485313-8485332 | None:intergenic | 20.0% |
!!! | GTTTGTTAATTACATATTGT+TGG | - | chr5_3:8485370-8485389 | Msa0796440:CDS | 20.0% |
!!! | GCAAATGTTTCTTTTTAAAT+TGG | - | chr5_3:8483463-8483482 | Msa0796440:exon | 20.0% |
!! | AATCTTATACATAACATAAG+CGG | + | chr5_3:8483535-8483554 | None:intergenic | 20.0% |
!! | TAATACTAGTTATAGAGTTA+GGG | + | chr5_3:8483757-8483776 | None:intergenic | 20.0% |
!!! | ATGCTTTTCTTTATCAATTT+GGG | + | chr5_3:8484911-8484930 | None:intergenic | 20.0% |
!!! | TATGCTTTTCTTTATCAATT+TGG | + | chr5_3:8484912-8484931 | None:intergenic | 20.0% |
!!! | ATAAAGAAAAGCATACATAA+GGG | - | chr5_3:8484917-8484936 | Msa0796440:intron | 20.0% |
!!! | TATTAACCCATGTTATATTT+TGG | - | chr5_3:8485276-8485295 | Msa0796440:intron | 20.0% |
!! | TAATTGCCAAAATATAACAT+GGG | + | chr5_3:8485285-8485304 | None:intergenic | 20.0% |
!! | AATGGAAATAGTCAAAAAAA+AGG | + | chr5_3:8485313-8485332 | None:intergenic | 20.0% |
!!! | GTTTGTTAATTACATATTGT+TGG | - | chr5_3:8485370-8485389 | Msa0796440:CDS | 20.0% |
! | TGATTGGGATTTAGAAATTA+GGG | + | chr5_3:8483223-8483242 | None:intergenic | 25.0% |
! | GTAATACTAGTTATAGAGTT+AGG | + | chr5_3:8483758-8483777 | None:intergenic | 25.0% |
! | AGTATTACTATACATATTGC+TGG | - | chr5_3:8483770-8483789 | Msa0796440:CDS | 25.0% |
!! | TCTGTGTAATTTTCAAATAC+TGG | - | chr5_3:8483953-8483972 | Msa0796440:CDS | 25.0% |
!! | GATAAAGAAAAGCATACATA+AGG | - | chr5_3:8484916-8484935 | Msa0796440:intron | 25.0% |
!! | TAAAGAAAAGCATACATAAG+GGG | - | chr5_3:8484918-8484937 | Msa0796440:intron | 25.0% |
! | AAGAAAAAAATGCAGAGAAA+TGG | - | chr5_3:8484951-8484970 | Msa0796440:intron | 25.0% |
! | AGAAAAAAATGCAGAGAAAT+GGG | - | chr5_3:8484952-8484971 | Msa0796440:intron | 25.0% |
! | GGATTAATGATAAGAAAATG+AGG | - | chr5_3:8485047-8485066 | Msa0796440:intron | 25.0% |
! | GTAATTGCCAAAATATAACA+TGG | + | chr5_3:8485286-8485305 | None:intergenic | 25.0% |
! | TAATCTAATGGTTAATGAAC+CGG | + | chr5_3:8485424-8485443 | None:intergenic | 25.0% |
! | TGATTGGGATTTAGAAATTA+GGG | + | chr5_3:8483223-8483242 | None:intergenic | 25.0% |
! | GTAATACTAGTTATAGAGTT+AGG | + | chr5_3:8483758-8483777 | None:intergenic | 25.0% |
! | AGTATTACTATACATATTGC+TGG | - | chr5_3:8483770-8483789 | Msa0796440:CDS | 25.0% |
!! | TCTGTGTAATTTTCAAATAC+TGG | - | chr5_3:8483953-8483972 | Msa0796440:CDS | 25.0% |
!! | GATAAAGAAAAGCATACATA+AGG | - | chr5_3:8484916-8484935 | Msa0796440:intron | 25.0% |
!! | TAAAGAAAAGCATACATAAG+GGG | - | chr5_3:8484918-8484937 | Msa0796440:intron | 25.0% |
! | AAGAAAAAAATGCAGAGAAA+TGG | - | chr5_3:8484951-8484970 | Msa0796440:intron | 25.0% |
! | AGAAAAAAATGCAGAGAAAT+GGG | - | chr5_3:8484952-8484971 | Msa0796440:intron | 25.0% |
! | GGATTAATGATAAGAAAATG+AGG | - | chr5_3:8485047-8485066 | Msa0796440:intron | 25.0% |
! | GTAATTGCCAAAATATAACA+TGG | + | chr5_3:8485286-8485305 | None:intergenic | 25.0% |
! | TAATCTAATGGTTAATGAAC+CGG | + | chr5_3:8485424-8485443 | None:intergenic | 25.0% |
GTGATTGGGATTTAGAAATT+AGG | + | chr5_3:8483224-8483243 | None:intergenic | 30.0% | |
GAAGAAAATAAAGAACGAAG+TGG | + | chr5_3:8483384-8483403 | None:intergenic | 30.0% | |
ATGTATGCTATAAGCTAGAT+TGG | - | chr5_3:8483605-8483624 | Msa0796440:CDS | 30.0% | |
TTAAATGTAATCACATGTGC+TGG | - | chr5_3:8483906-8483925 | Msa0796440:CDS | 30.0% | |
TTATTCTCTCATGCTGTTAT+AGG | - | chr5_3:8484058-8484077 | Msa0796440:CDS | 30.0% | |
TATTCTCTCATGCTGTTATA+GGG | - | chr5_3:8484059-8484078 | Msa0796440:CDS | 30.0% | |
AACCAATTTGTCGAAAAAAC+TGG | + | chr5_3:8484177-8484196 | None:intergenic | 30.0% | |
ACAGAATATCAAGAAGTCTA+AGG | - | chr5_3:8484301-8484320 | Msa0796440:CDS | 30.0% | |
GAGAAAAATTTCAAAGCACA+AGG | - | chr5_3:8484757-8484776 | Msa0796440:intron | 30.0% | |
!!! | GGTTTTATTAATAGCAGTTC+TGG | - | chr5_3:8485127-8485146 | Msa0796440:intron | 30.0% |
! | GTACCTTTTTGCATTGTTAT+CGG | - | chr5_3:8485178-8485197 | Msa0796440:intron | 30.0% |
TCCATTTATCACTAGAATAC+AGG | - | chr5_3:8485327-8485346 | Msa0796440:CDS | 30.0% | |
GTGATTGGGATTTAGAAATT+AGG | + | chr5_3:8483224-8483243 | None:intergenic | 30.0% | |
GAAGAAAATAAAGAACGAAG+TGG | + | chr5_3:8483384-8483403 | None:intergenic | 30.0% | |
ATGTATGCTATAAGCTAGAT+TGG | - | chr5_3:8483605-8483624 | Msa0796440:CDS | 30.0% | |
TTAAATGTAATCACATGTGC+TGG | - | chr5_3:8483906-8483925 | Msa0796440:CDS | 30.0% | |
TTATTCTCTCATGCTGTTAT+AGG | - | chr5_3:8484058-8484077 | Msa0796440:CDS | 30.0% | |
TATTCTCTCATGCTGTTATA+GGG | - | chr5_3:8484059-8484078 | Msa0796440:CDS | 30.0% | |
AACCAATTTGTCGAAAAAAC+TGG | + | chr5_3:8484177-8484196 | None:intergenic | 30.0% | |
ACAGAATATCAAGAAGTCTA+AGG | - | chr5_3:8484301-8484320 | Msa0796440:CDS | 30.0% | |
GAGAAAAATTTCAAAGCACA+AGG | - | chr5_3:8484757-8484776 | Msa0796440:intron | 30.0% | |
!!! | GGTTTTATTAATAGCAGTTC+TGG | - | chr5_3:8485127-8485146 | Msa0796440:intron | 30.0% |
! | GTACCTTTTTGCATTGTTAT+CGG | - | chr5_3:8485178-8485197 | Msa0796440:intron | 30.0% |
TCCATTTATCACTAGAATAC+AGG | - | chr5_3:8485327-8485346 | Msa0796440:CDS | 30.0% | |
AATAACGAGACCATACCTTT+GGG | + | chr5_3:8483298-8483317 | None:intergenic | 35.0% | |
AAATAACGAGACCATACCTT+TGG | + | chr5_3:8483299-8483318 | None:intergenic | 35.0% | |
!!! | AATTGGTTTTAGGGTCTGTT+TGG | - | chr5_3:8483480-8483499 | Msa0796440:CDS | 35.0% |
! | TAAGCTTTGTGAGACTGTTT+GGG | + | chr5_3:8483696-8483715 | None:intergenic | 35.0% |
! | ATAAGCTTTGTGAGACTGTT+TGG | + | chr5_3:8483697-8483716 | None:intergenic | 35.0% |
TTATAGAGTTAGGGACTGTT+TGG | + | chr5_3:8483748-8483767 | None:intergenic | 35.0% | |
ACTATACATATTGCTGGCAA+AGG | - | chr5_3:8483776-8483795 | Msa0796440:CDS | 35.0% | |
GTGAACGTCATATCTAATGT+CGG | + | chr5_3:8483851-8483870 | None:intergenic | 35.0% | |
TGTTGATGTTGGTCAAGATT+TGG | - | chr5_3:8484130-8484149 | Msa0796440:CDS | 35.0% | |
!!! | TGCCAGTTTTTTCGACAAAT+TGG | - | chr5_3:8484172-8484191 | Msa0796440:CDS | 35.0% |
CAACAAGAAACAGAAAGCAA+AGG | - | chr5_3:8484262-8484281 | Msa0796440:CDS | 35.0% | |
TGAACTTCTCAAGAAGAGTT+TGG | - | chr5_3:8484361-8484380 | Msa0796440:CDS | 35.0% | |
GAACTTCTCAAGAAGAGTTT+GGG | - | chr5_3:8484362-8484381 | Msa0796440:CDS | 35.0% | |
GGAAAAGAAAAAGCGAATGA+AGG | - | chr5_3:8484383-8484402 | Msa0796440:CDS | 35.0% | |
! | CTGATAATGATATCCTCTCT+TGG | + | chr5_3:8484582-8484601 | None:intergenic | 35.0% |
CAAGAGAGGATATCATTATC+AGG | - | chr5_3:8484580-8484599 | Msa0796440:intron | 35.0% | |
ATCAGGATAATAAACGCAAG+AGG | - | chr5_3:8484597-8484616 | Msa0796440:intron | 35.0% | |
TCAGGATAATAAACGCAAGA+GGG | - | chr5_3:8484598-8484617 | Msa0796440:intron | 35.0% | |
AAAGCACAAGGAACTTGAAA+GGG | - | chr5_3:8484769-8484788 | Msa0796440:intron | 35.0% | |
AAGAAGAATGATCCTGAGAA+GGG | - | chr5_3:8484812-8484831 | Msa0796440:intron | 35.0% | |
! | TTATCAATTTGGGATCGTCA+TGG | + | chr5_3:8484901-8484920 | None:intergenic | 35.0% |
AGAGAGAGAAAAAGCTATTG+CGG | - | chr5_3:8485080-8485099 | Msa0796440:intron | 35.0% | |
GCCTGTATTCTAGTGATAAA+TGG | + | chr5_3:8485331-8485350 | None:intergenic | 35.0% | |
! | TCACTAGAATACAGGCATTT+TGG | - | chr5_3:8485335-8485354 | Msa0796440:CDS | 35.0% |
! | TGGTTTGCATCATATCATCA+TGG | - | chr5_3:8485390-8485409 | Msa0796440:CDS | 35.0% |
TATCATCATGGCAGATTTAC+CGG | - | chr5_3:8485402-8485421 | Msa0796440:CDS | 35.0% | |
AATAACGAGACCATACCTTT+GGG | + | chr5_3:8483298-8483317 | None:intergenic | 35.0% | |
AAATAACGAGACCATACCTT+TGG | + | chr5_3:8483299-8483318 | None:intergenic | 35.0% | |
!!! | AATTGGTTTTAGGGTCTGTT+TGG | - | chr5_3:8483480-8483499 | Msa0796440:CDS | 35.0% |
! | TAAGCTTTGTGAGACTGTTT+GGG | + | chr5_3:8483696-8483715 | None:intergenic | 35.0% |
! | ATAAGCTTTGTGAGACTGTT+TGG | + | chr5_3:8483697-8483716 | None:intergenic | 35.0% |
TTATAGAGTTAGGGACTGTT+TGG | + | chr5_3:8483748-8483767 | None:intergenic | 35.0% | |
ACTATACATATTGCTGGCAA+AGG | - | chr5_3:8483776-8483795 | Msa0796440:CDS | 35.0% | |
GTGAACGTCATATCTAATGT+CGG | + | chr5_3:8483851-8483870 | None:intergenic | 35.0% | |
TGTTGATGTTGGTCAAGATT+TGG | - | chr5_3:8484130-8484149 | Msa0796440:CDS | 35.0% | |
!!! | TGCCAGTTTTTTCGACAAAT+TGG | - | chr5_3:8484172-8484191 | Msa0796440:CDS | 35.0% |
CAACAAGAAACAGAAAGCAA+AGG | - | chr5_3:8484262-8484281 | Msa0796440:CDS | 35.0% | |
TGAACTTCTCAAGAAGAGTT+TGG | - | chr5_3:8484361-8484380 | Msa0796440:CDS | 35.0% | |
GAACTTCTCAAGAAGAGTTT+GGG | - | chr5_3:8484362-8484381 | Msa0796440:CDS | 35.0% | |
GGAAAAGAAAAAGCGAATGA+AGG | - | chr5_3:8484383-8484402 | Msa0796440:CDS | 35.0% | |
! | CTGATAATGATATCCTCTCT+TGG | + | chr5_3:8484582-8484601 | None:intergenic | 35.0% |
CAAGAGAGGATATCATTATC+AGG | - | chr5_3:8484580-8484599 | Msa0796440:intron | 35.0% | |
ATCAGGATAATAAACGCAAG+AGG | - | chr5_3:8484597-8484616 | Msa0796440:intron | 35.0% | |
TCAGGATAATAAACGCAAGA+GGG | - | chr5_3:8484598-8484617 | Msa0796440:intron | 35.0% | |
AAAGCACAAGGAACTTGAAA+GGG | - | chr5_3:8484769-8484788 | Msa0796440:intron | 35.0% | |
AAGAAGAATGATCCTGAGAA+GGG | - | chr5_3:8484812-8484831 | Msa0796440:intron | 35.0% | |
! | TTATCAATTTGGGATCGTCA+TGG | + | chr5_3:8484901-8484920 | None:intergenic | 35.0% |
AGAGAGAGAAAAAGCTATTG+CGG | - | chr5_3:8485080-8485099 | Msa0796440:intron | 35.0% | |
GCCTGTATTCTAGTGATAAA+TGG | + | chr5_3:8485331-8485350 | None:intergenic | 35.0% | |
! | TCACTAGAATACAGGCATTT+TGG | - | chr5_3:8485335-8485354 | Msa0796440:CDS | 35.0% |
! | TGGTTTGCATCATATCATCA+TGG | - | chr5_3:8485390-8485409 | Msa0796440:CDS | 35.0% |
TATCATCATGGCAGATTTAC+CGG | - | chr5_3:8485402-8485421 | Msa0796440:CDS | 35.0% | |
AGTGCTTTGTAGGAATTCAG+AGG | + | chr5_3:8483824-8483843 | None:intergenic | 40.0% | |
ATGCTGTTATAGGGAGACTT+TGG | - | chr5_3:8484068-8484087 | Msa0796440:CDS | 40.0% | |
!! | ACTTTGGAGTGATGAAGATG+AGG | - | chr5_3:8484084-8484103 | Msa0796440:CDS | 40.0% |
GATGAAGATGAGGAAGCAAA+AGG | - | chr5_3:8484094-8484113 | Msa0796440:CDS | 40.0% | |
GTTGGCAGATAAAACTTAGC+TGG | + | chr5_3:8484209-8484228 | None:intergenic | 40.0% | |
GGTTTCTCGTTATCATCAGT+TGG | + | chr5_3:8484227-8484246 | None:intergenic | 40.0% | |
AGAAGTTCAAGTGTGGTTAC+AGG | + | chr5_3:8484350-8484369 | None:intergenic | 40.0% | |
CTTCTTGAGAAGTTCAAGTG+TGG | + | chr5_3:8484357-8484376 | None:intergenic | 40.0% | |
AGAAAAAGCGAATGAAGGTG+AGG | - | chr5_3:8484388-8484407 | Msa0796440:CDS | 40.0% | |
! | TGTGGTTAAGCCTTTTGTGT+CGG | - | chr5_3:8484421-8484440 | Msa0796440:CDS | 40.0% |
! | ATCGCAAGCTTGAAGGTTTT+CGG | - | chr5_3:8484498-8484517 | Msa0796440:CDS | 40.0% |
TTCTCTTGTAGCTTCTCATC+AGG | + | chr5_3:8484653-8484672 | None:intergenic | 40.0% | |
TGATGAGAAGCTACAAGAGA+AGG | - | chr5_3:8484652-8484671 | Msa0796440:intron | 40.0% | |
GTTTGGTCACGTTAAACTTC+AGG | - | chr5_3:8484712-8484731 | Msa0796440:intron | 40.0% | |
TCACGTTAAACTTCAGGATG+AGG | - | chr5_3:8484718-8484737 | Msa0796440:intron | 40.0% | |
CAAAGCACAAGGAACTTGAA+AGG | - | chr5_3:8484768-8484787 | Msa0796440:intron | 40.0% | |
ACTTGAAAGGGCTAAGAAGT+TGG | - | chr5_3:8484781-8484800 | Msa0796440:intron | 40.0% | |
GAAGAAGAATGATCCTGAGA+AGG | - | chr5_3:8484811-8484830 | Msa0796440:intron | 40.0% | |
CTATTGCTAAGAAGGAAGCA+TGG | - | chr5_3:8484840-8484859 | Msa0796440:intron | 40.0% | |
GGAAGAGAGAGTTCAATCAA+GGG | - | chr5_3:8484973-8484992 | Msa0796440:intron | 40.0% | |
TCAATCAAGGGATCAGTTGA+AGG | - | chr5_3:8484985-8485004 | Msa0796440:intron | 40.0% | |
AGGCAGAGAAGCAAAAGAAA+AGG | - | chr5_3:8485005-8485024 | Msa0796440:intron | 40.0% | |
GGTCAGATAATATAGCTGAG+AGG | - | chr5_3:8485026-8485045 | Msa0796440:intron | 40.0% | |
CCTCCGATAACAATGCAAAA+AGG | + | chr5_3:8485184-8485203 | None:intergenic | 40.0% | |
! | CCTTTTTGCATTGTTATCGG+AGG | - | chr5_3:8485181-8485200 | Msa0796440:intron | 40.0% |
CATCCATCAATTTCAACGTG+TGG | - | chr5_3:8485212-8485231 | Msa0796440:intron | 40.0% | |
AAGCCACACGTTGAAATTGA+TGG | + | chr5_3:8485218-8485237 | None:intergenic | 40.0% | |
AGTGCTTTGTAGGAATTCAG+AGG | + | chr5_3:8483824-8483843 | None:intergenic | 40.0% | |
ATGCTGTTATAGGGAGACTT+TGG | - | chr5_3:8484068-8484087 | Msa0796440:CDS | 40.0% | |
!! | ACTTTGGAGTGATGAAGATG+AGG | - | chr5_3:8484084-8484103 | Msa0796440:CDS | 40.0% |
GATGAAGATGAGGAAGCAAA+AGG | - | chr5_3:8484094-8484113 | Msa0796440:CDS | 40.0% | |
GTTGGCAGATAAAACTTAGC+TGG | + | chr5_3:8484209-8484228 | None:intergenic | 40.0% | |
GGTTTCTCGTTATCATCAGT+TGG | + | chr5_3:8484227-8484246 | None:intergenic | 40.0% | |
AGAAGTTCAAGTGTGGTTAC+AGG | + | chr5_3:8484350-8484369 | None:intergenic | 40.0% | |
CTTCTTGAGAAGTTCAAGTG+TGG | + | chr5_3:8484357-8484376 | None:intergenic | 40.0% | |
AGAAAAAGCGAATGAAGGTG+AGG | - | chr5_3:8484388-8484407 | Msa0796440:CDS | 40.0% | |
! | TGTGGTTAAGCCTTTTGTGT+CGG | - | chr5_3:8484421-8484440 | Msa0796440:CDS | 40.0% |
! | ATCGCAAGCTTGAAGGTTTT+CGG | - | chr5_3:8484498-8484517 | Msa0796440:CDS | 40.0% |
TTCTCTTGTAGCTTCTCATC+AGG | + | chr5_3:8484653-8484672 | None:intergenic | 40.0% | |
TGATGAGAAGCTACAAGAGA+AGG | - | chr5_3:8484652-8484671 | Msa0796440:intron | 40.0% | |
GTTTGGTCACGTTAAACTTC+AGG | - | chr5_3:8484712-8484731 | Msa0796440:intron | 40.0% | |
TCACGTTAAACTTCAGGATG+AGG | - | chr5_3:8484718-8484737 | Msa0796440:intron | 40.0% | |
CAAAGCACAAGGAACTTGAA+AGG | - | chr5_3:8484768-8484787 | Msa0796440:intron | 40.0% | |
ACTTGAAAGGGCTAAGAAGT+TGG | - | chr5_3:8484781-8484800 | Msa0796440:intron | 40.0% | |
GAAGAAGAATGATCCTGAGA+AGG | - | chr5_3:8484811-8484830 | Msa0796440:intron | 40.0% | |
CTATTGCTAAGAAGGAAGCA+TGG | - | chr5_3:8484840-8484859 | Msa0796440:intron | 40.0% | |
GGAAGAGAGAGTTCAATCAA+GGG | - | chr5_3:8484973-8484992 | Msa0796440:intron | 40.0% | |
TCAATCAAGGGATCAGTTGA+AGG | - | chr5_3:8484985-8485004 | Msa0796440:intron | 40.0% | |
AGGCAGAGAAGCAAAAGAAA+AGG | - | chr5_3:8485005-8485024 | Msa0796440:intron | 40.0% | |
GGTCAGATAATATAGCTGAG+AGG | - | chr5_3:8485026-8485045 | Msa0796440:intron | 40.0% | |
CCTCCGATAACAATGCAAAA+AGG | + | chr5_3:8485184-8485203 | None:intergenic | 40.0% | |
! | CCTTTTTGCATTGTTATCGG+AGG | - | chr5_3:8485181-8485200 | Msa0796440:intron | 40.0% |
CATCCATCAATTTCAACGTG+TGG | - | chr5_3:8485212-8485231 | Msa0796440:intron | 40.0% | |
AAGCCACACGTTGAAATTGA+TGG | + | chr5_3:8485218-8485237 | None:intergenic | 40.0% | |
TCTGCGAGACACAGATAATG+AGG | + | chr5_3:8483193-8483212 | None:intergenic | 45.0% | |
! | ACCATACCTTTGGGAAGAAG+CGG | + | chr5_3:8483289-8483308 | None:intergenic | 45.0% |
! | TGTCGGTGATAGTGCTTTGT+AGG | + | chr5_3:8483834-8483853 | None:intergenic | 45.0% |
GAAGCAAAAGGTTGTTGCAG+AGG | - | chr5_3:8484106-8484125 | Msa0796440:CDS | 45.0% | |
GTTGCAGAGGTTGTTGATGT+TGG | - | chr5_3:8484119-8484138 | Msa0796440:CDS | 45.0% | |
! | CTGATGATAACGAGAAACCG+TGG | - | chr5_3:8484228-8484247 | Msa0796440:CDS | 45.0% |
TAACGAGAAACCGTGGTTTC+AGG | - | chr5_3:8484235-8484254 | Msa0796440:CDS | 45.0% | |
AACGAGAAACCGTGGTTTCA+GGG | - | chr5_3:8484236-8484255 | Msa0796440:CDS | 45.0% | |
TTGTTGAGACCCTGAAACCA+CGG | + | chr5_3:8484248-8484267 | None:intergenic | 45.0% | |
GAATGAAGGTGAGGAAGAAG+AGG | - | chr5_3:8484397-8484416 | Msa0796440:CDS | 45.0% | |
AACTCGTAACTGTGCAGATC+CGG | - | chr5_3:8484523-8484542 | Msa0796440:CDS | 45.0% | |
TAACTGTGCAGATCCGGAAA+AGG | - | chr5_3:8484529-8484548 | Msa0796440:CDS | 45.0% | |
GAAGATAGAGACACCAAGAG+AGG | - | chr5_3:8484566-8484585 | Msa0796440:intron | 45.0% | |
TTGTAGCTTCTCATCAGGTG+CGG | + | chr5_3:8484648-8484667 | None:intergenic | 45.0% | |
GCTACAAGAGAAGGTGAAGA+AGG | - | chr5_3:8484661-8484680 | Msa0796440:intron | 45.0% | |
GCTTCAAAGGAGCTTGTGTT+TGG | - | chr5_3:8484695-8484714 | Msa0796440:intron | 45.0% | |
CTTCAGGATGAGGAAATGCT+AGG | - | chr5_3:8484728-8484747 | Msa0796440:intron | 45.0% | |
TGAAAGGGCTAAGAAGTTGG+AGG | - | chr5_3:8484784-8484803 | Msa0796440:intron | 45.0% | |
GGGTGAAGCTATTGCTAAGA+AGG | - | chr5_3:8484832-8484851 | Msa0796440:intron | 45.0% | |
GGACAGAGCTTCAGGAATTA+AGG | - | chr5_3:8484874-8484893 | Msa0796440:intron | 45.0% | |
GGGAAGAGAGAGTTCAATCA+AGG | - | chr5_3:8484972-8484991 | Msa0796440:intron | 45.0% | |
AGAGAAAAAGCTATTGCGGC+CGG | - | chr5_3:8485084-8485103 | Msa0796440:intron | 45.0% | |
TCTGCGAGACACAGATAATG+AGG | + | chr5_3:8483193-8483212 | None:intergenic | 45.0% | |
! | ACCATACCTTTGGGAAGAAG+CGG | + | chr5_3:8483289-8483308 | None:intergenic | 45.0% |
! | TGTCGGTGATAGTGCTTTGT+AGG | + | chr5_3:8483834-8483853 | None:intergenic | 45.0% |
GAAGCAAAAGGTTGTTGCAG+AGG | - | chr5_3:8484106-8484125 | Msa0796440:CDS | 45.0% | |
GTTGCAGAGGTTGTTGATGT+TGG | - | chr5_3:8484119-8484138 | Msa0796440:CDS | 45.0% | |
! | CTGATGATAACGAGAAACCG+TGG | - | chr5_3:8484228-8484247 | Msa0796440:CDS | 45.0% |
TAACGAGAAACCGTGGTTTC+AGG | - | chr5_3:8484235-8484254 | Msa0796440:CDS | 45.0% | |
AACGAGAAACCGTGGTTTCA+GGG | - | chr5_3:8484236-8484255 | Msa0796440:CDS | 45.0% | |
TTGTTGAGACCCTGAAACCA+CGG | + | chr5_3:8484248-8484267 | None:intergenic | 45.0% | |
GAATGAAGGTGAGGAAGAAG+AGG | - | chr5_3:8484397-8484416 | Msa0796440:CDS | 45.0% | |
AACTCGTAACTGTGCAGATC+CGG | - | chr5_3:8484523-8484542 | Msa0796440:CDS | 45.0% | |
TAACTGTGCAGATCCGGAAA+AGG | - | chr5_3:8484529-8484548 | Msa0796440:CDS | 45.0% | |
GAAGATAGAGACACCAAGAG+AGG | - | chr5_3:8484566-8484585 | Msa0796440:intron | 45.0% | |
TTGTAGCTTCTCATCAGGTG+CGG | + | chr5_3:8484648-8484667 | None:intergenic | 45.0% | |
GCTACAAGAGAAGGTGAAGA+AGG | - | chr5_3:8484661-8484680 | Msa0796440:intron | 45.0% | |
GCTTCAAAGGAGCTTGTGTT+TGG | - | chr5_3:8484695-8484714 | Msa0796440:intron | 45.0% | |
CTTCAGGATGAGGAAATGCT+AGG | - | chr5_3:8484728-8484747 | Msa0796440:intron | 45.0% | |
TGAAAGGGCTAAGAAGTTGG+AGG | - | chr5_3:8484784-8484803 | Msa0796440:intron | 45.0% | |
GGGTGAAGCTATTGCTAAGA+AGG | - | chr5_3:8484832-8484851 | Msa0796440:intron | 45.0% | |
GGACAGAGCTTCAGGAATTA+AGG | - | chr5_3:8484874-8484893 | Msa0796440:intron | 45.0% | |
GGGAAGAGAGAGTTCAATCA+AGG | - | chr5_3:8484972-8484991 | Msa0796440:intron | 45.0% | |
AGAGAAAAAGCTATTGCGGC+CGG | - | chr5_3:8485084-8485103 | Msa0796440:intron | 45.0% | |
! | ATACCTTTGGGAAGAAGCGG+TGG | + | chr5_3:8483286-8483305 | None:intergenic | 50.0% |
ACCGCTTCTTCCCAAAGGTA+TGG | - | chr5_3:8483285-8483304 | Msa0796440:three_prime_UTR | 50.0% | |
GTGTGGTTACAGGCTTCTCA+GGG | + | chr5_3:8484340-8484359 | None:intergenic | 50.0% | |
AGTGTGGTTACAGGCTTCTC+AGG | + | chr5_3:8484341-8484360 | None:intergenic | 50.0% | |
AGGTGAGGAAGAAGAGGATG+TGG | - | chr5_3:8484403-8484422 | Msa0796440:CDS | 50.0% | |
! | TAAGCCTTTTGTGTCGGAGC+TGG | - | chr5_3:8484427-8484446 | Msa0796440:CDS | 50.0% |
CCTTTGGCGAAGCTCTTCAT+AGG | + | chr5_3:8484474-8484493 | None:intergenic | 50.0% | |
CCTATGAAGAGCTTCGCCAA+AGG | - | chr5_3:8484471-8484490 | Msa0796440:CDS | 50.0% | |
CAAGCTTGCGATGAAGCCTT+TGG | + | chr5_3:8484490-8484509 | None:intergenic | 50.0% | |
AGGCTTCATCGCAAGCTTGA+AGG | - | chr5_3:8484491-8484510 | Msa0796440:CDS | 50.0% | |
! | CTCTTCTTAGCCGCCTTTTC+CGG | + | chr5_3:8484545-8484564 | None:intergenic | 50.0% |
GGAAAAGGCGGCTAAGAAGA+GGG | - | chr5_3:8484544-8484563 | Msa0796440:intron | 50.0% | |
AGGTGCGGGCTTACTTTCAT+TGG | + | chr5_3:8484633-8484652 | None:intergenic | 50.0% | |
TGTAGCTTCTCATCAGGTGC+GGG | + | chr5_3:8484647-8484666 | None:intergenic | 50.0% | |
GCAATAGCTTCACCCTTCTC+AGG | + | chr5_3:8484827-8484846 | None:intergenic | 50.0% | |
! | GGAAGCATGGAAAGCAGCAA+TGG | - | chr5_3:8484853-8484872 | Msa0796440:intron | 50.0% |
GAGAAAAAGCTATTGCGGCC+GGG | - | chr5_3:8485085-8485104 | Msa0796440:intron | 50.0% | |
! | ATACCTTTGGGAAGAAGCGG+TGG | + | chr5_3:8483286-8483305 | None:intergenic | 50.0% |
ACCGCTTCTTCCCAAAGGTA+TGG | - | chr5_3:8483285-8483304 | Msa0796440:three_prime_UTR | 50.0% | |
GTGTGGTTACAGGCTTCTCA+GGG | + | chr5_3:8484340-8484359 | None:intergenic | 50.0% | |
AGTGTGGTTACAGGCTTCTC+AGG | + | chr5_3:8484341-8484360 | None:intergenic | 50.0% | |
AGGTGAGGAAGAAGAGGATG+TGG | - | chr5_3:8484403-8484422 | Msa0796440:CDS | 50.0% | |
! | TAAGCCTTTTGTGTCGGAGC+TGG | - | chr5_3:8484427-8484446 | Msa0796440:CDS | 50.0% |
CCTTTGGCGAAGCTCTTCAT+AGG | + | chr5_3:8484474-8484493 | None:intergenic | 50.0% | |
CCTATGAAGAGCTTCGCCAA+AGG | - | chr5_3:8484471-8484490 | Msa0796440:CDS | 50.0% | |
CAAGCTTGCGATGAAGCCTT+TGG | + | chr5_3:8484490-8484509 | None:intergenic | 50.0% | |
AGGCTTCATCGCAAGCTTGA+AGG | - | chr5_3:8484491-8484510 | Msa0796440:CDS | 50.0% | |
! | CTCTTCTTAGCCGCCTTTTC+CGG | + | chr5_3:8484545-8484564 | None:intergenic | 50.0% |
GGAAAAGGCGGCTAAGAAGA+GGG | - | chr5_3:8484544-8484563 | Msa0796440:intron | 50.0% | |
AGGTGCGGGCTTACTTTCAT+TGG | + | chr5_3:8484633-8484652 | None:intergenic | 50.0% | |
TGTAGCTTCTCATCAGGTGC+GGG | + | chr5_3:8484647-8484666 | None:intergenic | 50.0% | |
GCAATAGCTTCACCCTTCTC+AGG | + | chr5_3:8484827-8484846 | None:intergenic | 50.0% | |
! | GGAAGCATGGAAAGCAGCAA+TGG | - | chr5_3:8484853-8484872 | Msa0796440:intron | 50.0% |
GAGAAAAAGCTATTGCGGCC+GGG | - | chr5_3:8485085-8485104 | Msa0796440:intron | 50.0% | |
TGGGAAGAAGCGGTGGATGA+CGG | + | chr5_3:8483279-8483298 | None:intergenic | 55.0% | |
CATCCACCGCTTCTTCCCAA+AGG | - | chr5_3:8483280-8483299 | Msa0796440:three_prime_UTR | 55.0% | |
!! | TGCTGGTGTCGATGCTACAG+AGG | - | chr5_3:8483923-8483942 | Msa0796440:CDS | 55.0% |
! | CCTTTTGTGTCGGAGCTGGA+CGG | - | chr5_3:8484431-8484450 | Msa0796440:CDS | 55.0% |
CTGTGCAGATCCGGAAAAGG+CGG | - | chr5_3:8484532-8484551 | Msa0796440:CDS | 55.0% | |
CGGAAAAGGCGGCTAAGAAG+AGG | - | chr5_3:8484543-8484562 | Msa0796440:intron | 55.0% | |
GAAGGTGAAGAAGGATGCCG+CGG | - | chr5_3:8484670-8484689 | Msa0796440:intron | 55.0% | |
!! | AAGCTCCTTTGAAGCCTCCG+CGG | + | chr5_3:8484690-8484709 | None:intergenic | 55.0% |
GCAGCAATGGACAGAGCTTC+AGG | - | chr5_3:8484866-8484885 | Msa0796440:intron | 55.0% | |
TCCCTGTGACCTTCAAAGCC+CGG | + | chr5_3:8485106-8485125 | None:intergenic | 55.0% | |
!! | GGCTTTGAAGGTCACAGGGA+AGG | - | chr5_3:8485106-8485125 | Msa0796440:intron | 55.0% |
TGGGAAGAAGCGGTGGATGA+CGG | + | chr5_3:8483279-8483298 | None:intergenic | 55.0% | |
CATCCACCGCTTCTTCCCAA+AGG | - | chr5_3:8483280-8483299 | Msa0796440:three_prime_UTR | 55.0% | |
!! | TGCTGGTGTCGATGCTACAG+AGG | - | chr5_3:8483923-8483942 | Msa0796440:CDS | 55.0% |
! | CCTTTTGTGTCGGAGCTGGA+CGG | - | chr5_3:8484431-8484450 | Msa0796440:CDS | 55.0% |
CTGTGCAGATCCGGAAAAGG+CGG | - | chr5_3:8484532-8484551 | Msa0796440:CDS | 55.0% | |
CGGAAAAGGCGGCTAAGAAG+AGG | - | chr5_3:8484543-8484562 | Msa0796440:intron | 55.0% | |
GAAGGTGAAGAAGGATGCCG+CGG | - | chr5_3:8484670-8484689 | Msa0796440:intron | 55.0% | |
!! | AAGCTCCTTTGAAGCCTCCG+CGG | + | chr5_3:8484690-8484709 | None:intergenic | 55.0% |
GCAGCAATGGACAGAGCTTC+AGG | - | chr5_3:8484866-8484885 | Msa0796440:intron | 55.0% | |
TCCCTGTGACCTTCAAAGCC+CGG | + | chr5_3:8485106-8485125 | None:intergenic | 55.0% | |
!! | GGCTTTGAAGGTCACAGGGA+AGG | - | chr5_3:8485106-8485125 | Msa0796440:intron | 55.0% |
CGGCGAAAGGCGGAGTGATT+GGG | + | chr5_3:8483238-8483257 | None:intergenic | 60.0% | |
ACGGCGAAAGGCGGAGTGAT+TGG | + | chr5_3:8483239-8483258 | None:intergenic | 60.0% | |
! | AAGAAGCGGTGGATGACGGC+GGG | + | chr5_3:8483275-8483294 | None:intergenic | 60.0% |
! | GAAGAAGCGGTGGATGACGG+CGG | + | chr5_3:8483276-8483295 | None:intergenic | 60.0% |
CCGTCCAGCTCCGACACAAA+AGG | + | chr5_3:8484434-8484453 | None:intergenic | 60.0% | |
CGGAGCTGGACGGAGATGAT+CGG | - | chr5_3:8484441-8484460 | Msa0796440:CDS | 60.0% | |
! | CTATTGCGGCCGGGCTTTGA+AGG | - | chr5_3:8485094-8485113 | Msa0796440:intron | 60.0% |
!! | GCCGGGCTTTGAAGGTCACA+GGG | - | chr5_3:8485102-8485121 | Msa0796440:intron | 60.0% |
CGGCGAAAGGCGGAGTGATT+GGG | + | chr5_3:8483238-8483257 | None:intergenic | 60.0% | |
ACGGCGAAAGGCGGAGTGAT+TGG | + | chr5_3:8483239-8483258 | None:intergenic | 60.0% | |
! | AAGAAGCGGTGGATGACGGC+GGG | + | chr5_3:8483275-8483294 | None:intergenic | 60.0% |
! | GAAGAAGCGGTGGATGACGG+CGG | + | chr5_3:8483276-8483295 | None:intergenic | 60.0% |
CCGTCCAGCTCCGACACAAA+AGG | + | chr5_3:8484434-8484453 | None:intergenic | 60.0% | |
CGGAGCTGGACGGAGATGAT+CGG | - | chr5_3:8484441-8484460 | Msa0796440:CDS | 60.0% | |
! | CTATTGCGGCCGGGCTTTGA+AGG | - | chr5_3:8485094-8485113 | Msa0796440:intron | 60.0% |
!! | GCCGGGCTTTGAAGGTCACA+GGG | - | chr5_3:8485102-8485121 | Msa0796440:intron | 60.0% |
GGTGAAGAAGGATGCCGCGG+AGG | - | chr5_3:8484673-8484692 | Msa0796440:intron | 65.0% | |
GGATGCCGCGGAGGCTTCAA+AGG | - | chr5_3:8484682-8484701 | Msa0796440:intron | 65.0% | |
!! | GGCCGGGCTTTGAAGGTCAC+AGG | - | chr5_3:8485101-8485120 | Msa0796440:intron | 65.0% |
GGTGAAGAAGGATGCCGCGG+AGG | - | chr5_3:8484673-8484692 | Msa0796440:intron | 65.0% | |
GGATGCCGCGGAGGCTTCAA+AGG | - | chr5_3:8484682-8484701 | Msa0796440:intron | 65.0% | |
!! | GGCCGGGCTTTGAAGGTCAC+AGG | - | chr5_3:8485101-8485120 | Msa0796440:intron | 65.0% |
GGTCGACGGACGGCGAAAGG+CGG | + | chr5_3:8483248-8483267 | None:intergenic | 70.0% | |
TCGGGTCGACGGACGGCGAA+AGG | + | chr5_3:8483251-8483270 | None:intergenic | 70.0% | |
! | TGACGGCGGGTTCGGGTCGA+CGG | + | chr5_3:8483262-8483281 | None:intergenic | 70.0% |
! | CGGTGGATGACGGCGGGTTC+GGG | + | chr5_3:8483269-8483288 | None:intergenic | 70.0% |
! | GCGGTGGATGACGGCGGGTT+CGG | + | chr5_3:8483270-8483289 | None:intergenic | 70.0% |
GGTCGACGGACGGCGAAAGG+CGG | + | chr5_3:8483248-8483267 | None:intergenic | 70.0% | |
TCGGGTCGACGGACGGCGAA+AGG | + | chr5_3:8483251-8483270 | None:intergenic | 70.0% | |
! | TGACGGCGGGTTCGGGTCGA+CGG | + | chr5_3:8483262-8483281 | None:intergenic | 70.0% |
! | CGGTGGATGACGGCGGGTTC+GGG | + | chr5_3:8483269-8483288 | None:intergenic | 70.0% |
! | GCGGTGGATGACGGCGGGTT+CGG | + | chr5_3:8483270-8483289 | None:intergenic | 70.0% |
! | GGCGGGTTCGGGTCGACGGA+CGG | + | chr5_3:8483258-8483277 | None:intergenic | 75.0% |
! | GGCGGGTTCGGGTCGACGGA+CGG | + | chr5_3:8483258-8483277 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_3 | gene | 8483174 | 8485458 | 8483174 | ID=Msa0796440;Name=Msa0796440 |
chr5_3 | mRNA | 8483174 | 8485458 | 8483174 | ID=Msa0796440-mRNA-1;Parent=Msa0796440;Name=Msa0796440-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0|0.5|1|1|1|2|305|403 |
chr5_3 | exon | 8483174 | 8484552 | 8483174 | ID=Msa0796440-mRNA-1:exon:3498;Parent=Msa0796440-mRNA-1 |
chr5_3 | exon | 8485321 | 8485458 | 8485321 | ID=Msa0796440-mRNA-1:exon:3497;Parent=Msa0796440-mRNA-1 |
chr5_3 | CDS | 8485321 | 8485458 | 8485321 | ID=Msa0796440-mRNA-1:cds;Parent=Msa0796440-mRNA-1 |
chr5_3 | CDS | 8483479 | 8484552 | 8483479 | ID=Msa0796440-mRNA-1:cds;Parent=Msa0796440-mRNA-1 |
chr5_3 | three_prime_UTR | 8483174 | 8483478 | 8483174 | ID=Msa0796440-mRNA-1:three_prime_utr;Parent=Msa0796440-mRNA-1 |
Gene Sequence |
Protein sequence |