Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0161290 | Msa0280200 | 0.806607 | 7.577693e-50 | -8.615850e-47 |
| Msa0280200 | Msa0467380 | 0.806213 | 9.174513e-50 | -8.615850e-47 |
| Msa0280200 | Msa0820850 | 0.807546 | 4.793762e-50 | -8.615850e-47 |
| Msa0280200 | Msa0849040 | 0.809152 | 2.178885e-50 | -8.615850e-47 |
| Msa0280200 | Msa0860030 | -0.803332 | 3.666841e-49 | -8.615850e-47 |
| Msa0280200 | Msa0861130 | 0.800027 | 1.747184e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 60 sgRNAs with CRISPR-Local
Find 297 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGCTTCTTGCCTTCGCTTA+TGG | 0.192410 | 2_3:-14636587 | Msa0280200:CDS |
| CAGCATTTAGCGTGTCCTTA+TGG | 0.198144 | 2_3:-14636538 | Msa0280200:CDS |
| ATATTGAAAATGGTCAATTT+AGG | 0.235255 | 2_3:-14636196 | Msa0280200:three_prime_UTR |
| GATTAAGAACCTTTCTTTGT+AGG | 0.272118 | 2_3:-14640513 | Msa0280200:intron |
| TTAGATGTCAATATTGAAAA+TGG | 0.297834 | 2_3:-14636206 | Msa0280200:three_prime_UTR |
| GGAAGGGTGGAGCAAAATTC+TGG | 0.300283 | 2_3:-14640423 | Msa0280200:CDS |
| AGGTCAGATTTGTAAGGAAT+TGG | 0.329934 | 2_3:+14636743 | None:intergenic |
| GTCTAACTCTAAGCGGGATT+TGG | 0.344979 | 2_3:-14636618 | Msa0280200:CDS |
| TCAATCTCTCATAGGTTTCT+TGG | 0.356960 | 2_3:-14636851 | Msa0280200:CDS |
| GCAAAAGAGCACTGTGTTGC+TGG | 0.360610 | 2_3:+14636816 | None:intergenic |
| AGCATTTAGCGTGTCCTTAT+GGG | 0.373209 | 2_3:-14636537 | Msa0280200:CDS |
| ATCGTGTATAGACTTAATTT+TGG | 0.391488 | 2_3:-14636359 | Msa0280200:three_prime_UTR |
| ATCGTGTATAGACTTAATTT+TGG | 0.391488 | 2_3:-14636401 | Msa0280200:three_prime_UTR |
| AGAGACAGCCAGAGCACAGC+AGG | 0.399403 | 2_3:+14636689 | None:intergenic |
| GTGGAGGATCGGTTGTCTAT+AGG | 0.420707 | 2_3:-14640399 | Msa0280200:CDS |
| GTTTACTTCCTGCTGTGCTC+TGG | 0.429356 | 2_3:-14636697 | Msa0280200:CDS |
| TTGATCCCCATTTGCAAGAT+GGG | 0.431335 | 2_3:-14636641 | Msa0280200:CDS |
| CTTTGCTTTCCTACAAAGAA+AGG | 0.431830 | 2_3:+14640504 | None:intergenic |
| GTTAGACCCCATCTTGCAAA+TGG | 0.437576 | 2_3:+14636634 | None:intergenic |
| GGTCAGATTTGTAAGGAATT+GGG | 0.447839 | 2_3:+14636744 | None:intergenic |
| ATTGATCCCCATTTGCAAGA+TGG | 0.456214 | 2_3:-14636642 | Msa0280200:CDS |
| AAAGAGAGGTCAGATTTGTA+AGG | 0.463727 | 2_3:+14636737 | None:intergenic |
| CTCGTGGTCGTAGGCACAGT+TGG | 0.465323 | 2_3:+14640471 | None:intergenic |
| TGTTTCAAAGGAGCTGGAGC+TGG | 0.466362 | 2_3:-14640623 | Msa0280200:CDS |
| TTCTTCTCTCACCGTCGAAA+AGG | 0.470515 | 2_3:-14640998 | Msa0280200:intron |
| CATCTTCTGTGTGCCCCATA+AGG | 0.470769 | 2_3:+14636523 | None:intergenic |
| AATTGTGATAATCTTGGCAT+TGG | 0.471775 | 2_3:-14636265 | Msa0280200:three_prime_UTR |
| GGGAAGGCTCAATCTCTCAT+AGG | 0.492099 | 2_3:-14636859 | Msa0280200:CDS |
| TTAGACCCCATCTTGCAAAT+GGG | 0.509068 | 2_3:+14636635 | None:intergenic |
| TTGCTCCACCCTTCCACTGT+CGG | 0.516885 | 2_3:+14640431 | None:intergenic |
| TTTGTATAGATATTAAATGA+AGG | 0.522660 | 2_3:-14636294 | Msa0280200:three_prime_UTR |
| CTTATGGGGCACACAGAAGA+TGG | 0.523126 | 2_3:-14636522 | Msa0280200:CDS |
| TTTGCAATGCTAGCTGCCCT+CGG | 0.526285 | 2_3:-14636770 | Msa0280200:CDS |
| GCACGATCACCGACAGTGGA+AGG | 0.531653 | 2_3:-14640440 | Msa0280200:CDS |
| GATGGGGTCTAACTCTAAGC+GGG | 0.562167 | 2_3:-14636624 | Msa0280200:CDS |
| TGGGGCACACAGAAGATGGT+TGG | 0.563192 | 2_3:-14636518 | Msa0280200:CDS |
| CTCGTGGTGCTCGTGGTCGT+AGG | 0.564055 | 2_3:+14640462 | None:intergenic |
| TAAGCGAAGGCAAGAAGCAT+GGG | 0.567142 | 2_3:+14636590 | None:intergenic |
| GCATTTAGCGTGTCCTTATG+GGG | 0.577705 | 2_3:-14636536 | Msa0280200:CDS |
| TCTTGCCTTCGCTTATGGAG+TGG | 0.580026 | 2_3:-14636582 | Msa0280200:CDS |
| ATAAGCGAAGGCAAGAAGCA+TGG | 0.585805 | 2_3:+14636589 | None:intergenic |
| CTTTCTTTGTAGGAAAGCAA+AGG | 0.587451 | 2_3:-14640503 | Msa0280200:CDS |
| GTAAGGAATTGGGTCACCGA+GGG | 0.591695 | 2_3:+14636754 | None:intergenic |
| AAAATTCTGGAGTGGAGGAT+CGG | 0.592711 | 2_3:-14640410 | Msa0280200:CDS |
| TGATCCCCATTTGCAAGATG+GGG | 0.595486 | 2_3:-14636640 | Msa0280200:CDS |
| GCACTGCAAACGCTGAAAAG+CGG | 0.602181 | 2_3:-14641036 | Msa0280200:CDS |
| CACGATCACCGACAGTGGAA+GGG | 0.603784 | 2_3:-14640439 | Msa0280200:CDS |
| CTTTGTAGGAAAGCAAAGGT+CGG | 0.605352 | 2_3:-14640499 | Msa0280200:CDS |
| TAGACCCCATCTTGCAAATG+GGG | 0.606912 | 2_3:+14636636 | None:intergenic |
| GAGGATCGGTTGTCTATAGG+AGG | 0.613500 | 2_3:-14640396 | Msa0280200:intron |
| GATCACCGACAGTGGAAGGG+TGG | 0.615054 | 2_3:-14640436 | Msa0280200:CDS |
| GTAAACCACTCCATAAGCGA+AGG | 0.620884 | 2_3:+14636577 | None:intergenic |
| GATCGTGCTCGTGGTGCTCG+TGG | 0.622875 | 2_3:+14640455 | None:intergenic |
| ACCAAGCTACTTCAAAAGAG+AGG | 0.632099 | 2_3:+14636723 | None:intergenic |
| GGAGCAAAATTCTGGAGTGG+AGG | 0.632742 | 2_3:-14640415 | Msa0280200:CDS |
| ACGAGCACGATCACCGACAG+TGG | 0.636366 | 2_3:-14640444 | Msa0280200:CDS |
| GGTGGAGCAAAATTCTGGAG+TGG | 0.651652 | 2_3:-14640418 | Msa0280200:CDS |
| AGATGGGGTCTAACTCTAAG+CGG | 0.661602 | 2_3:-14636625 | Msa0280200:CDS |
| ACTGTCGGTGATCGTGCTCG+TGG | 0.667299 | 2_3:+14640446 | None:intergenic |
| TGTAAGGAATTGGGTCACCG+AGG | 0.704885 | 2_3:+14636753 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAACAATTATTTCAAATA+AGG | - | chr2_3:14638157-14638176 | Msa0280200:intron | 10.0% |
| !! | AAGAAAAAGAAACAAATTAT+CGG | + | chr2_3:14636583-14636602 | None:intergenic | 15.0% |
| !! | ATGAAAATAATATTCCTTAA+AGG | + | chr2_3:14638139-14638158 | None:intergenic | 15.0% |
| !!! | ATTCTAAAATGTACTTTAAT+TGG | - | chr2_3:14639053-14639072 | Msa0280200:intron | 15.0% |
| !! | TTTGTATAGATATTAAATGA+AGG | - | chr2_3:14640947-14640966 | Msa0280200:intron | 15.0% |
| !!! | ACAAATTACCACAAATTTTA+CGG | + | chr2_3:14636411-14636430 | None:intergenic | 20.0% |
| !!! | TATCACAAACTTTAACTTTA+CGG | + | chr2_3:14636544-14636563 | None:intergenic | 20.0% |
| !!! | TAGTATATTCTGATTTTTGT+GGG | - | chr2_3:14637022-14637041 | Msa0280200:intron | 20.0% |
| !! | AAATAAATAGTCAAGTGAAT+GGG | + | chr2_3:14637681-14637700 | None:intergenic | 20.0% |
| !! | AAAATAAATAGTCAAGTGAA+TGG | + | chr2_3:14637682-14637701 | None:intergenic | 20.0% |
| !!! | AACATAGCAATATGTAATTT+TGG | - | chr2_3:14637915-14637934 | Msa0280200:intron | 20.0% |
| !!! | ACATAGCAATATGTAATTTT+GGG | - | chr2_3:14637916-14637935 | Msa0280200:intron | 20.0% |
| !! | TATTTCAAATAAGGATATAG+AGG | - | chr2_3:14638166-14638185 | Msa0280200:intron | 20.0% |
| !! | ATCAAGAACATGTATTTATT+AGG | - | chr2_3:14638673-14638692 | Msa0280200:intron | 20.0% |
| !! | AATGTGTTAAATTTCTGATT+AGG | + | chr2_3:14638886-14638905 | None:intergenic | 20.0% |
| !! | AAACAGAACAATTATGTTAT+AGG | + | chr2_3:14639081-14639100 | None:intergenic | 20.0% |
| !! | CAAAATTCTAGTATTCATAA+TGG | - | chr2_3:14639205-14639224 | Msa0280200:intron | 20.0% |
| !! | AAAAAATGATGTAGAAAACT+AGG | - | chr2_3:14640184-14640203 | Msa0280200:intron | 20.0% |
| !! | AAAAATGATGTAGAAAACTA+GGG | - | chr2_3:14640185-14640204 | Msa0280200:intron | 20.0% |
| !! | GTGAAAAAAAAAAATTACCA+AGG | + | chr2_3:14640360-14640379 | None:intergenic | 20.0% |
| !!! | TGGTAATTTTTTTTTTTCAC+AGG | - | chr2_3:14640360-14640379 | Msa0280200:intron | 20.0% |
| !!! | GGTAATTTTTTTTTTTCACA+GGG | - | chr2_3:14640361-14640380 | Msa0280200:intron | 20.0% |
| !!! | GTAATTTTTTTTTTTCACAG+GGG | - | chr2_3:14640362-14640381 | Msa0280200:intron | 20.0% |
| !! | TTAGATGTCAATATTGAAAA+TGG | - | chr2_3:14641035-14641054 | Msa0280200:CDS | 20.0% |
| ! | GAAGAAACGAAAACATTAAA+TGG | + | chr2_3:14636504-14636523 | None:intergenic | 25.0% |
| !! | CTAGTATATTCTGATTTTTG+TGG | - | chr2_3:14637021-14637040 | Msa0280200:intron | 25.0% |
| !! | ATGGTTTACCAAAATCTTTT+GGG | + | chr2_3:14637101-14637120 | None:intergenic | 25.0% |
| !! | AATGGTTTACCAAAATCTTT+TGG | + | chr2_3:14637102-14637121 | None:intergenic | 25.0% |
| ! | AAACTCTGCATTTAAATAGA+TGG | + | chr2_3:14637237-14637256 | None:intergenic | 25.0% |
| ! | AACTAACAAAACAAAAGGAA+AGG | + | chr2_3:14637493-14637512 | None:intergenic | 25.0% |
| ! | ATACGAAAACAAAATAAGTC+TGG | + | chr2_3:14637548-14637567 | None:intergenic | 25.0% |
| ! | ACACAATGGTATATAATTTG+CGG | + | chr2_3:14637942-14637961 | None:intergenic | 25.0% |
| ! | TATTGTTCAATACAACATCA+CGG | + | chr2_3:14638009-14638028 | None:intergenic | 25.0% |
| !! | TTTTAAACCAAAAGCCTTTA+AGG | - | chr2_3:14638122-14638141 | Msa0280200:intron | 25.0% |
| !! | TAATATTCCTTAAAGGCTTT+TGG | + | chr2_3:14638132-14638151 | None:intergenic | 25.0% |
| ! | GATCAATTTGAAAATTGATG+CGG | - | chr2_3:14638202-14638221 | Msa0280200:intron | 25.0% |
| ! | ATGAAAATAATATTCCTCTG+AGG | + | chr2_3:14638323-14638342 | None:intergenic | 25.0% |
| ! | ATTATAACTTCGTGAAGAAA+AGG | - | chr2_3:14638341-14638360 | Msa0280200:intron | 25.0% |
| ! | AATAATGGTCTATAATGGTT+CGG | - | chr2_3:14638508-14638527 | Msa0280200:intron | 25.0% |
| ! | ATATAAGTTCATTAGTTGTG+AGG | - | chr2_3:14638557-14638576 | Msa0280200:intron | 25.0% |
| !! | AATGTAATTTGCATTCTTAG+TGG | - | chr2_3:14639124-14639143 | Msa0280200:intron | 25.0% |
| ! | ATTAAAACACTAAGAACTGA+TGG | + | chr2_3:14639350-14639369 | None:intergenic | 25.0% |
| !!! | ACTTTTTCTCTTTATCAAGT+AGG | - | chr2_3:14639430-14639449 | Msa0280200:intron | 25.0% |
| !! | CATTTATTGATGATTTCAGT+AGG | + | chr2_3:14639466-14639485 | None:intergenic | 25.0% |
| !!! | TGCAAATTTCACTTTGTTTT+TGG | - | chr2_3:14640040-14640059 | Msa0280200:intron | 25.0% |
| ! | TGTGTAAAAAAACTGTTAGT+TGG | - | chr2_3:14640106-14640125 | Msa0280200:intron | 25.0% |
| ! | TTTCAATTAGATATTGCTCA+TGG | - | chr2_3:14640226-14640245 | Msa0280200:intron | 25.0% |
| !! | TAGTATCCTTGTTTAGTTTA+CGG | - | chr2_3:14640305-14640324 | Msa0280200:intron | 25.0% |
| ! | ATATTTCCGTAAACTAAACA+AGG | + | chr2_3:14640314-14640333 | None:intergenic | 25.0% |
| !!! | ATAATTTTTAGTCTAGTCAC+AGG | - | chr2_3:14640771-14640790 | Msa0280200:intron | 25.0% |
| !! | ATCGTGTATAGACTTAATTT+TGG | - | chr2_3:14640840-14640859 | Msa0280200:intron | 25.0% |
| !! | ATCGTGTATAGACTTAATTT+TGG | - | chr2_3:14640840-14640859 | Msa0280200:intron | 25.0% |
| ! | ACCAAAAATTGTGATAATCT+TGG | - | chr2_3:14640970-14640989 | Msa0280200:intron | 25.0% |
| CTCAAATTCCGTAAAATTTG+TGG | - | chr2_3:14636400-14636419 | Msa0280200:three_prime_UTR | 30.0% | |
| ! | TAGATGTTTTCGTGTTTCAA+AGG | - | chr2_3:14636606-14636625 | Msa0280200:CDS | 30.0% |
| GATTAAGAACCTTTCTTTGT+AGG | - | chr2_3:14636728-14636747 | Msa0280200:CDS | 30.0% | |
| CATTATCTCAGATAGAGATA+AGG | + | chr2_3:14636959-14636978 | None:intergenic | 30.0% | |
| ! | CTTATCTCTATCTGAGATAA+TGG | - | chr2_3:14636957-14636976 | Msa0280200:intron | 30.0% |
| !! | CTATCTGAGATAATGGAATT+AGG | - | chr2_3:14636964-14636983 | Msa0280200:intron | 30.0% |
| TAACACAACCATTAATGAGA+TGG | - | chr2_3:14637204-14637223 | Msa0280200:intron | 30.0% | |
| TTAAGATAGCTAAGGAATGA+AGG | + | chr2_3:14637277-14637296 | None:intergenic | 30.0% | |
| CAGAAATCTTAAGATAGCTA+AGG | + | chr2_3:14637285-14637304 | None:intergenic | 30.0% | |
| ! | TCTAAACTCTTCATGGTTTT+TGG | + | chr2_3:14637318-14637337 | None:intergenic | 30.0% |
| AAAACAAAAGGAAAGGACAA+CGG | + | chr2_3:14637486-14637505 | None:intergenic | 30.0% | |
| TTCCCTCAAATCCTTATATA+CGG | - | chr2_3:14637701-14637720 | Msa0280200:intron | 30.0% | |
| TAAAATAAGCTGCTACACAA+TGG | + | chr2_3:14637956-14637975 | None:intergenic | 30.0% | |
| ! | TGTTTTCTGAACTATAACAG+TGG | + | chr2_3:14638035-14638054 | None:intergenic | 30.0% |
| ! | GTTATTAGGAAGTACAGTTA+CGG | + | chr2_3:14638086-14638105 | None:intergenic | 30.0% |
| ! | CATATAGCCGAATAGTTTTT+AGG | + | chr2_3:14638232-14638251 | None:intergenic | 30.0% |
| TTACAGTTTGTAGAGCAAAA+AGG | + | chr2_3:14638255-14638274 | None:intergenic | 30.0% | |
| GTTCAAAATTGCGGTAATAT+TGG | + | chr2_3:14638294-14638313 | None:intergenic | 30.0% | |
| !!! | AGGCTTTTAGTTCAAAATTG+CGG | + | chr2_3:14638303-14638322 | None:intergenic | 30.0% |
| GATGGAATAATGGTCTATAA+TGG | - | chr2_3:14638503-14638522 | Msa0280200:intron | 30.0% | |
| CATAGCATTAAATGTGGAAT+AGG | - | chr2_3:14638630-14638649 | Msa0280200:intron | 30.0% | |
| ATGTGAGCTATTAATACAGT+TGG | - | chr2_3:14638778-14638797 | Msa0280200:intron | 30.0% | |
| AGCTATTAATACAGTTGGTT+AGG | - | chr2_3:14638783-14638802 | Msa0280200:intron | 30.0% | |
| GCTATTAATACAGTTGGTTA+GGG | - | chr2_3:14638784-14638803 | Msa0280200:intron | 30.0% | |
| ATAAATGATGTAGCAGTCAT+AGG | + | chr2_3:14638857-14638876 | None:intergenic | 30.0% | |
| ! | TCTAGAGTTACTAATAGGAA+AGG | - | chr2_3:14638958-14638977 | Msa0280200:intron | 30.0% |
| TACAGATGTAACATCAAATG+TGG | - | chr2_3:14639017-14639036 | Msa0280200:intron | 30.0% | |
| AGCTTAGTTGAAAAACAAAG+TGG | + | chr2_3:14639380-14639399 | None:intergenic | 30.0% | |
| !! | CAAAACAAAGAGTATTCTTG+AGG | + | chr2_3:14639555-14639574 | None:intergenic | 30.0% |
| CTAACTGAAATTCATATACC+AGG | + | chr2_3:14639644-14639663 | None:intergenic | 30.0% | |
| TAAGATTGAACTGAATGTGA+TGG | + | chr2_3:14639784-14639803 | None:intergenic | 30.0% | |
| TTCTGATCAAGAAGAAAGAT+GGG | + | chr2_3:14639983-14640002 | None:intergenic | 30.0% | |
| !!! | CAGTTTTTTTACACATTGAC+TGG | + | chr2_3:14640101-14640120 | None:intergenic | 30.0% |
| TTGGAATGATGTAGAAAACT+AGG | - | chr2_3:14640125-14640144 | Msa0280200:intron | 30.0% | |
| TGGAATGATGTAGAAAACTA+GGG | - | chr2_3:14640126-14640145 | Msa0280200:intron | 30.0% | |
| TATGTTCTATCTCTGTAACT+AGG | - | chr2_3:14640160-14640179 | Msa0280200:intron | 30.0% | |
| ATGTTCTATCTCTGTAACTA+GGG | - | chr2_3:14640161-14640180 | Msa0280200:intron | 30.0% | |
| TAAACAAGGATACTAAGTTG+TGG | + | chr2_3:14640300-14640319 | None:intergenic | 30.0% | |
| AAATAAACCTGTGATAACCT+TGG | - | chr2_3:14640340-14640359 | Msa0280200:intron | 30.0% | |
| AAAATTACCAAGGTTATCAC+AGG | + | chr2_3:14640350-14640369 | None:intergenic | 30.0% | |
| !!! | TTTTTTTTTTTCACAGGGGA+AGG | - | chr2_3:14640366-14640385 | Msa0280200:intron | 30.0% |
| CTACTTCAGAAAAAAGAAGT+AGG | + | chr2_3:14640805-14640824 | None:intergenic | 30.0% | |
| ! | GTGTATAGACTTAATTTTGG+TGG | - | chr2_3:14640843-14640862 | Msa0280200:intron | 30.0% |
| !! | TATAGACTTAATTTTGGTGG+TGG | - | chr2_3:14640846-14640865 | Msa0280200:intron | 30.0% |
| ! | GTGTATAGACTTAATTTTGG+TGG | - | chr2_3:14640843-14640862 | Msa0280200:intron | 30.0% |
| !! | ATAGACTTAATTTTGGTGGT+CGG | - | chr2_3:14640847-14640866 | Msa0280200:intron | 30.0% |
| ! | GCCAAGATTATCACAATTTT+TGG | + | chr2_3:14640974-14640993 | None:intergenic | 30.0% |
| AATTGTGATAATCTTGGCAT+TGG | - | chr2_3:14640976-14640995 | Msa0280200:intron | 30.0% | |
| !! | GTGGTAATTTGTTTATCCGT+CGG | - | chr2_3:14636419-14636438 | Msa0280200:three_prime_UTR | 35.0% |
| CTTTGCTTTCCTACAAAGAA+AGG | + | chr2_3:14636740-14636759 | None:intergenic | 35.0% | |
| CTTTCTTTGTAGGAAAGCAA+AGG | - | chr2_3:14636738-14636757 | Msa0280200:CDS | 35.0% | |
| ! | GAGATAAGGTTTTTACGTTC+TGG | + | chr2_3:14636945-14636964 | None:intergenic | 35.0% |
| TGACATAAAAGCTTCAGCTA+CGG | - | chr2_3:14636993-14637012 | Msa0280200:intron | 35.0% | |
| !!! | TTTTGGGTTCACAGTCATTA+TGG | + | chr2_3:14637085-14637104 | None:intergenic | 35.0% |
| ! | ACTGTGAACCCAAAAGATTT+TGG | - | chr2_3:14637090-14637109 | Msa0280200:intron | 35.0% |
| !! | GGTTTAGGGTGTTTTATCAA+TGG | + | chr2_3:14637120-14637139 | None:intergenic | 35.0% |
| !!! | TTTTTTCGTCCAACTATGCA+AGG | + | chr2_3:14637141-14637160 | None:intergenic | 35.0% |
| CATAGTTGGACGAAAAAAAC+TGG | - | chr2_3:14637143-14637162 | Msa0280200:intron | 35.0% | |
| GAAAAAAACTGGAAGCAGTT+GGG | - | chr2_3:14637154-14637173 | Msa0280200:intron | 35.0% | |
| GAAGTTGTCTAAACTCTTCA+TGG | + | chr2_3:14637325-14637344 | None:intergenic | 35.0% | |
| ACAACTTCCTCATGTTTGTT+AGG | - | chr2_3:14637337-14637356 | Msa0280200:intron | 35.0% | |
| ! | CAACTTCCTCATGTTTGTTA+GGG | - | chr2_3:14637338-14637357 | Msa0280200:intron | 35.0% |
| CTAAATCCCTAACAAACATG+AGG | + | chr2_3:14637347-14637366 | None:intergenic | 35.0% | |
| GTTAGGGATTTAGAAACTGA+TGG | - | chr2_3:14637354-14637373 | Msa0280200:intron | 35.0% | |
| GCGACAACTAACAAAACAAA+AGG | + | chr2_3:14637498-14637517 | None:intergenic | 35.0% | |
| AGTTGTCGCGTTTAAATCTT+CGG | - | chr2_3:14637509-14637528 | Msa0280200:intron | 35.0% | |
| GACCGTATATAAGGATTTGA+GGG | + | chr2_3:14637706-14637725 | None:intergenic | 35.0% | |
| AGACCGTATATAAGGATTTG+AGG | + | chr2_3:14637707-14637726 | None:intergenic | 35.0% | |
| CATATAGCAGACCGTATATA+AGG | + | chr2_3:14637715-14637734 | None:intergenic | 35.0% | |
| TCTGCTATATGTAAACCAGA+TGG | - | chr2_3:14637724-14637743 | Msa0280200:intron | 35.0% | |
| ATAAGAATATGCAGACCATC+TGG | + | chr2_3:14637742-14637761 | None:intergenic | 35.0% | |
| ! | GCGGTCATATTAGTGTTATT+AGG | + | chr2_3:14638100-14638119 | None:intergenic | 35.0% |
| !!! | AGGCTTTTGGTTTAAAACTG+CGG | + | chr2_3:14638119-14638138 | None:intergenic | 35.0% |
| CGGTGAACCTAAAAACTATT+CGG | - | chr2_3:14638222-14638241 | Msa0280200:intron | 35.0% | |
| !! | CGGTAATATTGGTGTTTTTC+TGG | + | chr2_3:14638283-14638302 | None:intergenic | 35.0% |
| ! | TTTTGAACTAAAAGCCTCAG+AGG | - | chr2_3:14638306-14638325 | Msa0280200:intron | 35.0% |
| TGAATTGAGCGATGGAATAA+TGG | - | chr2_3:14638493-14638512 | Msa0280200:intron | 35.0% | |
| AAGTTCATTAGTTGTGAGGA+TGG | - | chr2_3:14638561-14638580 | Msa0280200:intron | 35.0% | |
| CCACATTTAATGCTATGTGT+TGG | + | chr2_3:14638627-14638646 | None:intergenic | 35.0% | |
| CCAACACATAGCATTAAATG+TGG | - | chr2_3:14638624-14638643 | Msa0280200:intron | 35.0% | |
| AGGGAATTCTGTTAAGATCT+TGG | - | chr2_3:14638803-14638822 | Msa0280200:intron | 35.0% | |
| ! | TCTCCATCAATTTTCTCCTA+TGG | - | chr2_3:14638916-14638935 | Msa0280200:intron | 35.0% |
| TGACCATAGGAGAAAATTGA+TGG | + | chr2_3:14638922-14638941 | None:intergenic | 35.0% | |
| ! | CAGTGTCTAGAGTTACTAAT+AGG | - | chr2_3:14638953-14638972 | Msa0280200:intron | 35.0% |
| TAGGAAAGGCTTGAAGATAT+TGG | - | chr2_3:14638972-14638991 | Msa0280200:intron | 35.0% | |
| !! | ATATTGGTTCAGGATGACAA+TGG | - | chr2_3:14638988-14639007 | Msa0280200:intron | 35.0% |
| AACAAAATGATACTGCTGAG+AGG | + | chr2_3:14639241-14639260 | None:intergenic | 35.0% | |
| ! | TCAGCAGTATCATTTTGTTG+TGG | - | chr2_3:14639242-14639261 | Msa0280200:intron | 35.0% |
| !! | ATCATTTTGTTGTGGTGTGT+AGG | - | chr2_3:14639250-14639269 | Msa0280200:intron | 35.0% |
| !! | TCATTTTGTTGTGGTGTGTA+GGG | - | chr2_3:14639251-14639270 | Msa0280200:intron | 35.0% |
| ATGCTTTCTGTACTCAAGAA+GGG | + | chr2_3:14639298-14639317 | None:intergenic | 35.0% | |
| AAACACTAAGAACTGATGGA+GGG | + | chr2_3:14639346-14639365 | None:intergenic | 35.0% | |
| AAAACACTAAGAACTGATGG+AGG | + | chr2_3:14639347-14639366 | None:intergenic | 35.0% | |
| ATGATTTCAGTAGGAAACTG+TGG | + | chr2_3:14639457-14639476 | None:intergenic | 35.0% | |
| ACAAATTCTTTGTTACCTCC+AGG | - | chr2_3:14639488-14639507 | Msa0280200:intron | 35.0% | |
| !! | AACAAAGAGTATTCTTGAGG+TGG | + | chr2_3:14639552-14639571 | None:intergenic | 35.0% |
| AGTAGCTTCAGTAAAAATGC+AGG | + | chr2_3:14639581-14639600 | None:intergenic | 35.0% | |
| ! | ATCTATGCAAAAGTGTGGTA+TGG | + | chr2_3:14639675-14639694 | None:intergenic | 35.0% |
| ! | AACTGAATGTGATGGAACAT+AGG | + | chr2_3:14639776-14639795 | None:intergenic | 35.0% |
| AAAGTCCTGTTCTTTGACAT+AGG | - | chr2_3:14639804-14639823 | Msa0280200:intron | 35.0% | |
| GTAACTGACCAATACTCAAA+AGG | - | chr2_3:14639907-14639926 | Msa0280200:intron | 35.0% | |
| !! | AAGAGCAACCTTTTGAGTAT+TGG | + | chr2_3:14639918-14639937 | None:intergenic | 35.0% |
| TCTGATCAAGAAGAAAGATG+GGG | + | chr2_3:14639982-14640001 | None:intergenic | 35.0% | |
| GTTCTGATCAAGAAGAAAGA+TGG | + | chr2_3:14639984-14640003 | None:intergenic | 35.0% | |
| TCAATCTCTCATAGGTTTCT+TGG | - | chr2_3:14640390-14640409 | Msa0280200:intron | 35.0% | |
| GGTCAGATTTGTAAGGAATT+GGG | + | chr2_3:14640500-14640519 | None:intergenic | 35.0% | |
| AGGTCAGATTTGTAAGGAAT+TGG | + | chr2_3:14640501-14640520 | None:intergenic | 35.0% | |
| AAAGAGAGGTCAGATTTGTA+AGG | + | chr2_3:14640507-14640526 | None:intergenic | 35.0% | |
| ! | GAGAAGAGTAACCTTTTCGA+CGG | + | chr2_3:14636257-14636276 | None:intergenic | 40.0% |
| GAGAGAAGAAGAAGTTACGA+CGG | + | chr2_3:14636233-14636252 | None:intergenic | 40.0% | |
| ! | GAGAAGAGTAACCTTTTCGA+CGG | + | chr2_3:14636257-14636276 | None:intergenic | 40.0% |
| ! | TTTTCGTGTTTCAAAGGAGC+TGG | - | chr2_3:14636612-14636631 | Msa0280200:CDS | 40.0% |
| CTTTGTAGGAAAGCAAAGGT+CGG | - | chr2_3:14636742-14636761 | Msa0280200:CDS | 40.0% | |
| !! | AAAATTCTGGAGTGGAGGAT+CGG | - | chr2_3:14636831-14636850 | Msa0280200:CDS | 40.0% |
| TGCATCACTCAAAGCATGAT+AGG | - | chr2_3:14636897-14636916 | Msa0280200:intron | 40.0% | |
| GCATCACTCAAAGCATGATA+GGG | - | chr2_3:14636898-14636917 | Msa0280200:intron | 40.0% | |
| GTCCAACTATGCAAGGTTTA+GGG | + | chr2_3:14637134-14637153 | None:intergenic | 40.0% | |
| CGAAAAAAACTGGAAGCAGT+TGG | - | chr2_3:14637153-14637172 | Msa0280200:intron | 40.0% | |
| GAGAACGTCCATCTCATTAA+TGG | + | chr2_3:14637215-14637234 | None:intergenic | 40.0% | |
| GGAATGAAGGACAATGATGA+TGG | + | chr2_3:14637264-14637283 | None:intergenic | 40.0% | |
| CTGCAAAAGAGTTCAGTCAT+CGG | + | chr2_3:14637424-14637443 | None:intergenic | 40.0% | |
| TGTCTGCATTGTAACACAGA+AGG | + | chr2_3:14637838-14637857 | None:intergenic | 40.0% | |
| TGAACTGATGTAGTTCCTCT+AGG | + | chr2_3:14638368-14638387 | None:intergenic | 40.0% | |
| TACTCTACTGAATTGAGCGA+TGG | - | chr2_3:14638485-14638504 | Msa0280200:intron | 40.0% | |
| !! | AATGCTATGTGTTGGTTAGC+TGG | + | chr2_3:14638619-14638638 | None:intergenic | 40.0% |
| TGCAACATATGGTTGACCAT+AGG | + | chr2_3:14638935-14638954 | None:intergenic | 40.0% | |
| ACTCTAGACACTGCAACATA+TGG | + | chr2_3:14638946-14638965 | None:intergenic | 40.0% | |
| !! | AGGCTTGAAGATATTGGTTC+AGG | - | chr2_3:14638978-14638997 | Msa0280200:intron | 40.0% |
| GATTTACTTCACTATTCGCG+CGG | - | chr2_3:14639180-14639199 | Msa0280200:intron | 40.0% | |
| ATTTACTTCACTATTCGCGC+GGG | - | chr2_3:14639181-14639200 | Msa0280200:intron | 40.0% | |
| AGAAGGGATAATGCATGATG+TGG | + | chr2_3:14639282-14639301 | None:intergenic | 40.0% | |
| GATGCTTTCTGTACTCAAGA+AGG | + | chr2_3:14639299-14639318 | None:intergenic | 40.0% | |
| AACACTAAGAACTGATGGAG+GGG | + | chr2_3:14639345-14639364 | None:intergenic | 40.0% | |
| ! | GAAGCTACTTCTGTGTTGTT+TGG | - | chr2_3:14639592-14639611 | Msa0280200:intron | 40.0% |
| ! | CAAAAGTGTGGTATGGTTTC+AGG | + | chr2_3:14639668-14639687 | None:intergenic | 40.0% |
| CTCAGATCTATGCAAAAGTG+TGG | + | chr2_3:14639680-14639699 | None:intergenic | 40.0% | |
| ! | CACACTTTTGCATAGATCTG+AGG | - | chr2_3:14639678-14639697 | Msa0280200:intron | 40.0% |
| ! | TAGTAGAGATGAGTGGCTTT+TGG | + | chr2_3:14639736-14639755 | None:intergenic | 40.0% |
| AAGCTCCTATGTCAAAGAAC+AGG | + | chr2_3:14639812-14639831 | None:intergenic | 40.0% | |
| ATGCGAGTGCATGATTCAAA+GGG | + | chr2_3:14639849-14639868 | None:intergenic | 40.0% | |
| AAAAGGTTGCTCTTCATACC+TGG | - | chr2_3:14639924-14639943 | Msa0280200:intron | 40.0% | |
| ! | TCTGAAGTGCTATACATTCC+AGG | + | chr2_3:14639945-14639964 | None:intergenic | 40.0% |
| CTGATCAAGAAGAAAGATGG+GGG | + | chr2_3:14639981-14640000 | None:intergenic | 40.0% | |
| !!! | ACCTCTCTTTTGAAGTAGCT+TGG | - | chr2_3:14640517-14640536 | Msa0280200:intron | 40.0% |
| ACCAAGCTACTTCAAAAGAG+AGG | + | chr2_3:14640521-14640540 | None:intergenic | 40.0% | |
| ATTGATCCCCATTTGCAAGA+TGG | - | chr2_3:14640599-14640618 | Msa0280200:intron | 40.0% | |
| TTGATCCCCATTTGCAAGAT+GGG | - | chr2_3:14640600-14640619 | Msa0280200:intron | 40.0% | |
| TTAGACCCCATCTTGCAAAT+GGG | + | chr2_3:14640609-14640628 | None:intergenic | 40.0% | |
| AGCATTTAGCGTGTCCTTAT+GGG | - | chr2_3:14640704-14640723 | Msa0280200:intron | 40.0% | |
| TTCTTCTCTCACCGTCGAAA+AGG | - | chr2_3:14636243-14636262 | Msa0280200:three_prime_UTR | 45.0% | |
| TTCTTCTCTCACCGTCGAAA+AGG | - | chr2_3:14636243-14636262 | Msa0280200:three_prime_UTR | 45.0% | |
| AGAGAGAGAGAGAGAGGAAA+CGG | + | chr2_3:14636374-14636393 | None:intergenic | 45.0% | |
| AGAGATAGAGAGAGAGAGAG+AGG | + | chr2_3:14636380-14636399 | None:intergenic | 45.0% | |
| ATTTGTTTATCCGTCGGCGA+CGG | - | chr2_3:14636425-14636444 | Msa0280200:exon | 45.0% | |
| TGGGTTCACAGTCATTATGG+TGG | + | chr2_3:14637082-14637101 | None:intergenic | 45.0% | |
| CACCCTAAACCTTGCATAGT+TGG | - | chr2_3:14637129-14637148 | Msa0280200:intron | 45.0% | |
| CGTCCAACTATGCAAGGTTT+AGG | + | chr2_3:14637135-14637154 | None:intergenic | 45.0% | |
| !!! | CACTTTTGGCTCTTTTGGCA+TGG | + | chr2_3:14637382-14637401 | None:intergenic | 45.0% |
| CATGCCAAAAGAGCCAAAAG+TGG | - | chr2_3:14637380-14637399 | Msa0280200:intron | 45.0% | |
| ! | AACTTCACACGGACCACTTT+TGG | + | chr2_3:14637396-14637415 | None:intergenic | 45.0% |
| !! | CATCGGCTTCTAACTTCACA+CGG | + | chr2_3:14637407-14637426 | None:intergenic | 45.0% |
| ! | AAAGGAAAGGACAACGGACT+TGG | + | chr2_3:14637480-14637499 | None:intergenic | 45.0% |
| TCGTGAAGAAAAGGACCTAG+AGG | - | chr2_3:14638350-14638369 | Msa0280200:intron | 45.0% | |
| GCTCACATTCACGAAGATGA+AGG | + | chr2_3:14638766-14638785 | None:intergenic | 45.0% | |
| GTAGCAGTCATAGGCTACAT+GGG | + | chr2_3:14638848-14638867 | None:intergenic | 45.0% | |
| TGTAGCAGTCATAGGCTACA+TGG | + | chr2_3:14638849-14638868 | None:intergenic | 45.0% | |
| ATACTGCTGAGAGGAAGAAC+AGG | + | chr2_3:14639232-14639251 | None:intergenic | 45.0% | |
| !! | TTTTGTTGTGGTGTGTAGGG+TGG | - | chr2_3:14639254-14639273 | Msa0280200:intron | 45.0% |
| ACACTAAGAACTGATGGAGG+GGG | + | chr2_3:14639344-14639363 | None:intergenic | 45.0% | |
| ATACAAGTGGAATCACCTGG+AGG | + | chr2_3:14639506-14639525 | None:intergenic | 45.0% | |
| CCAATACAAGTGGAATCACC+TGG | + | chr2_3:14639509-14639528 | None:intergenic | 45.0% | |
| CCAGGTGATTCCACTTGTAT+TGG | - | chr2_3:14639506-14639525 | Msa0280200:intron | 45.0% | |
| TGTGTGTGGACCAATACAAG+TGG | + | chr2_3:14639519-14639538 | None:intergenic | 45.0% | |
| GTGGTGTACTCTAATGTGTG+TGG | + | chr2_3:14639533-14639552 | None:intergenic | 45.0% | |
| CATTCTTCACACACTTCTCC+TGG | - | chr2_3:14639623-14639642 | Msa0280200:intron | 45.0% | |
| CAGCTGTTAGTAGAGATGAG+TGG | + | chr2_3:14639743-14639762 | None:intergenic | 45.0% | |
| GATGCGAGTGCATGATTCAA+AGG | + | chr2_3:14639850-14639869 | None:intergenic | 45.0% | |
| ACACTGTCAGCTGAAGGAAT+TGG | + | chr2_3:14640011-14640030 | None:intergenic | 45.0% | |
| GATAGTACACTGTCAGCTGA+AGG | + | chr2_3:14640017-14640036 | None:intergenic | 45.0% | |
| ! | CATTGACTGGAAGAAGAGAC+TGG | + | chr2_3:14640088-14640107 | None:intergenic | 45.0% |
| ! | CAACACAGTGCTCTTTTGCT+TGG | - | chr2_3:14640429-14640448 | Msa0280200:CDS | 45.0% |
| TGATCCCCATTTGCAAGATG+GGG | - | chr2_3:14640601-14640620 | Msa0280200:intron | 45.0% | |
| TAGACCCCATCTTGCAAATG+GGG | + | chr2_3:14640608-14640627 | None:intergenic | 45.0% | |
| GTTAGACCCCATCTTGCAAA+TGG | + | chr2_3:14640610-14640629 | None:intergenic | 45.0% | |
| AGATGGGGTCTAACTCTAAG+CGG | - | chr2_3:14640616-14640635 | Msa0280200:CDS | 45.0% | |
| GTCTAACTCTAAGCGGGATT+TGG | - | chr2_3:14640623-14640642 | Msa0280200:CDS | 45.0% | |
| ! | TAAGCGAAGGCAAGAAGCAT+GGG | + | chr2_3:14640654-14640673 | None:intergenic | 45.0% |
| ATAAGCGAAGGCAAGAAGCA+TGG | + | chr2_3:14640655-14640674 | None:intergenic | 45.0% | |
| ATGCTTCTTGCCTTCGCTTA+TGG | - | chr2_3:14640654-14640673 | Msa0280200:intron | 45.0% | |
| GTAAACCACTCCATAAGCGA+AGG | + | chr2_3:14640667-14640686 | None:intergenic | 45.0% | |
| CAGCATTTAGCGTGTCCTTA+TGG | - | chr2_3:14640703-14640722 | Msa0280200:intron | 45.0% | |
| GCATTTAGCGTGTCCTTATG+GGG | - | chr2_3:14640705-14640724 | Msa0280200:intron | 45.0% | |
| GCACTGCAAACGCTGAAAAG+CGG | - | chr2_3:14636205-14636224 | Msa0280200:three_prime_UTR | 50.0% | |
| ACTCTTCTCTCTCTCTCCGT+CGG | - | chr2_3:14636268-14636287 | Msa0280200:three_prime_UTR | 50.0% | |
| AACGGCGATAGAACCTTTGC+CGG | + | chr2_3:14636356-14636375 | None:intergenic | 50.0% | |
| TGTTTCAAAGGAGCTGGAGC+TGG | - | chr2_3:14636618-14636637 | Msa0280200:CDS | 50.0% | |
| AGCTGCTCGTTTACCCAGTA+CGG | - | chr2_3:14636641-14636660 | Msa0280200:CDS | 50.0% | |
| TCGTTTACCCAGTACGGTTC+AGG | - | chr2_3:14636647-14636666 | Msa0280200:CDS | 50.0% | |
| CGAGTATCCTGAACCGTACT+GGG | + | chr2_3:14636657-14636676 | None:intergenic | 50.0% | |
| TCGAGTATCCTGAACCGTAC+TGG | + | chr2_3:14636658-14636677 | None:intergenic | 50.0% | |
| GGAAGGGTGGAGCAAAATTC+TGG | - | chr2_3:14636818-14636837 | Msa0280200:CDS | 50.0% | |
| ! | GGTGGAGCAAAATTCTGGAG+TGG | - | chr2_3:14636823-14636842 | Msa0280200:CDS | 50.0% |
| !! | GGAGCAAAATTCTGGAGTGG+AGG | - | chr2_3:14636826-14636845 | Msa0280200:CDS | 50.0% |
| GTGGAGGATCGGTTGTCTAT+AGG | - | chr2_3:14636842-14636861 | Msa0280200:CDS | 50.0% | |
| GAGGATCGGTTGTCTATAGG+AGG | - | chr2_3:14636845-14636864 | Msa0280200:CDS | 50.0% | |
| !!! | CGGACCACTTTTGGCTCTTT+TGG | + | chr2_3:14637387-14637406 | None:intergenic | 50.0% |
| ! | GCTTTTGGCACTACAGACTG+GGG | + | chr2_3:14639721-14639740 | None:intergenic | 50.0% |
| ! | GGCTTTTGGCACTACAGACT+GGG | + | chr2_3:14639722-14639741 | None:intergenic | 50.0% |
| ! | TGGCTTTTGGCACTACAGAC+TGG | + | chr2_3:14639723-14639742 | None:intergenic | 50.0% |
| GGGAAGGCTCAATCTCTCAT+AGG | - | chr2_3:14640382-14640401 | Msa0280200:intron | 50.0% | |
| !! | GCAAAAGAGCACTGTGTTGC+TGG | + | chr2_3:14640428-14640447 | None:intergenic | 50.0% |
| TTTGCAATGCTAGCTGCCCT+CGG | - | chr2_3:14640471-14640490 | Msa0280200:CDS | 50.0% | |
| GTAAGGAATTGGGTCACCGA+GGG | + | chr2_3:14640490-14640509 | None:intergenic | 50.0% | |
| TGTAAGGAATTGGGTCACCG+AGG | + | chr2_3:14640491-14640510 | None:intergenic | 50.0% | |
| GTTTACTTCCTGCTGTGCTC+TGG | - | chr2_3:14640544-14640563 | Msa0280200:intron | 50.0% | |
| GATGGGGTCTAACTCTAAGC+GGG | - | chr2_3:14640617-14640636 | Msa0280200:CDS | 50.0% | |
| TCTTGCCTTCGCTTATGGAG+TGG | - | chr2_3:14640659-14640678 | Msa0280200:intron | 50.0% | |
| CATCTTCTGTGTGCCCCATA+AGG | + | chr2_3:14640721-14640740 | None:intergenic | 50.0% | |
| CTTATGGGGCACACAGAAGA+TGG | - | chr2_3:14640719-14640738 | Msa0280200:intron | 50.0% | |
| AATGGCGATAGAACCGTCGC+CGG | + | chr2_3:14636486-14636505 | None:intergenic | 55.0% | |
| CACGATCACCGACAGTGGAA+GGG | - | chr2_3:14636802-14636821 | Msa0280200:CDS | 55.0% | |
| TTGCTCCACCCTTCCACTGT+CGG | + | chr2_3:14636813-14636832 | None:intergenic | 55.0% | |
| TGGGGCACACAGAAGATGGT+TGG | - | chr2_3:14640723-14640742 | Msa0280200:intron | 55.0% | |
| TTATCCGTCGGCGACGGTTC+CGG | - | chr2_3:14636431-14636450 | Msa0280200:exon | 60.0% | |
| CTCGTGGTCGTAGGCACAGT+TGG | + | chr2_3:14636773-14636792 | None:intergenic | 60.0% | |
| ACTGTCGGTGATCGTGCTCG+TGG | + | chr2_3:14636798-14636817 | None:intergenic | 60.0% | |
| ACGAGCACGATCACCGACAG+TGG | - | chr2_3:14636797-14636816 | Msa0280200:CDS | 60.0% | |
| GCACGATCACCGACAGTGGA+AGG | - | chr2_3:14636801-14636820 | Msa0280200:CDS | 60.0% | |
| GATCACCGACAGTGGAAGGG+TGG | - | chr2_3:14636805-14636824 | Msa0280200:CDS | 60.0% | |
| AGAGACAGCCAGAGCACAGC+AGG | + | chr2_3:14640555-14640574 | None:intergenic | 60.0% | |
| CTCTCTCTCTCCGTCGGCGA+CGG | - | chr2_3:14636328-14636347 | Msa0280200:three_prime_UTR | 65.0% | |
| TTTGCCGGAACCGTCGCCGA+CGG | + | chr2_3:14636341-14636360 | None:intergenic | 65.0% | |
| TCGGCGATCGGAACCGTCTC+CGG | + | chr2_3:14636453-14636472 | None:intergenic | 65.0% | |
| ! | GGAACCATCGCGTCGGCGAT+CGG | + | chr2_3:14636465-14636484 | None:intergenic | 65.0% |
| GATCGCCGACGCGATGGTTC+CGG | - | chr2_3:14636464-14636483 | Msa0280200:CDS | 65.0% | |
| CTCGTGGTGCTCGTGGTCGT+AGG | + | chr2_3:14636782-14636801 | None:intergenic | 65.0% | |
| GATCGTGCTCGTGGTGCTCG+TGG | + | chr2_3:14636789-14636808 | None:intergenic | 65.0% | |
| CTCTCCGTCGGCGACGGTTC+CGG | - | chr2_3:14636334-14636353 | Msa0280200:three_prime_UTR | 70.0% | |
| GTCGGCGACGGTTCCGGCAA+AGG | - | chr2_3:14636340-14636359 | Msa0280200:three_prime_UTR | 70.0% | |
| GTCTCCGGAACCGTCGCCGA+CGG | + | chr2_3:14636438-14636457 | None:intergenic | 70.0% | |
| GTCGGCGACGGTTCCGGAGA+CGG | - | chr2_3:14636437-14636456 | Msa0280200:exon | 70.0% | |
| GGTTCCGATCGCCGACGCGA+TGG | - | chr2_3:14636458-14636477 | Msa0280200:CDS | 70.0% | |
| CGTCGCCGGAACCATCGCGT+CGG | + | chr2_3:14636472-14636491 | None:intergenic | 70.0% | |
| CGACGCGATGGTTCCGGCGA+CGG | - | chr2_3:14636470-14636489 | Msa0280200:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 14636196 | 14641067 | 14636196 | ID=Msa0280200;Name=Msa0280200 |
| chr2_3 | mRNA | 14636196 | 14641067 | 14636196 | ID=Msa0280200-mRNA-1;Parent=Msa0280200;Name=Msa0280200-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|1|0.75|1|0.33|0.5|4|243|230 |
| chr2_3 | exon | 14636196 | 14636881 | 14636196 | ID=Msa0280200-mRNA-1:exon:6189;Parent=Msa0280200-mRNA-1 |
| chr2_3 | exon | 14640397 | 14640528 | 14640397 | ID=Msa0280200-mRNA-1:exon:6188;Parent=Msa0280200-mRNA-1 |
| chr2_3 | exon | 14640606 | 14640654 | 14640606 | ID=Msa0280200-mRNA-1:exon:6187;Parent=Msa0280200-mRNA-1 |
| chr2_3 | exon | 14640999 | 14641067 | 14640999 | ID=Msa0280200-mRNA-1:exon:6186;Parent=Msa0280200-mRNA-1 |
| chr2_3 | CDS | 14640999 | 14641067 | 14640999 | ID=Msa0280200-mRNA-1:cds;Parent=Msa0280200-mRNA-1 |
| chr2_3 | CDS | 14640606 | 14640654 | 14640606 | ID=Msa0280200-mRNA-1:cds;Parent=Msa0280200-mRNA-1 |
| chr2_3 | CDS | 14640397 | 14640528 | 14640397 | ID=Msa0280200-mRNA-1:cds;Parent=Msa0280200-mRNA-1 |
| chr2_3 | CDS | 14636439 | 14636881 | 14636439 | ID=Msa0280200-mRNA-1:cds;Parent=Msa0280200-mRNA-1 |
| chr2_3 | three_prime_UTR | 14636196 | 14636438 | 14636196 | ID=Msa0280200-mRNA-1:three_prime_utr;Parent=Msa0280200-mRNA-1 |
| Gene Sequence |
| Protein sequence |
