Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0280360 | AFK35708.1 | 91.384 | 383 | 28 | 5 | 1 | 382 | 1 | 379 | 0.0 | 536 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0280360 | sp|O22900|WRK23_ARATH | 44.207 | 328 | 138 | 11 | 70 | 374 | 32 | 337 | 1.34e-54 | 186 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0280360 | I3S616 | 91.384 | 383 | 28 | 5 | 1 | 382 | 1 | 379 | 0.0 | 536 |
Gene ID | Type | Classification |
---|---|---|
Msa0280360 | TF | WRKY |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0199350 | Msa0280360 | 0.840356 | 9.136148e-58 | -8.615850e-47 |
Msa0280360 | Msa0462450 | 0.803586 | 3.248405e-49 | -8.615850e-47 |
Msa0280360 | Msa0709140 | 0.801247 | 9.854293e-49 | -8.615850e-47 |
Msa0280360 | Msa1031460 | 0.800728 | 1.257500e-48 | -8.615850e-47 |
Msa0280360 | Msa1089190 | 0.801105 | 1.053291e-48 | -8.615850e-47 |
Msa0280360 | Msa1101240 | 0.801407 | 9.134487e-49 | -8.615850e-47 |
Msa0280360 | Msa1188350 | 0.801406 | 9.138863e-49 | -8.615850e-47 |
Msa0280360 | Msa1379020 | 0.806411 | 8.335360e-50 | -8.615850e-47 |
Msa0280360 | Msa1407880 | 0.808242 | 3.410175e-50 | -8.615850e-47 |
Msa0280360 | Msa1443620 | 0.802613 | 5.163297e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0280360 | MtrunA17_Chr2g0294231 | 90.885 | 384 | 29 | 6 | 1 | 382 | 1 | 380 | 0.0 | 531 |
Msa0280360 | MtrunA17_Chr1g0194481 | 47.097 | 310 | 131 | 8 | 64 | 368 | 36 | 317 | 7.91e-68 | 217 |
Msa0280360 | MtrunA17_Chr7g0270191 | 41.830 | 306 | 129 | 9 | 73 | 374 | 35 | 295 | 8.65e-54 | 179 |
Msa0280360 | MtrunA17_Chr4g0068541 | 36.792 | 424 | 167 | 17 | 23 | 368 | 8 | 408 | 2.68e-51 | 177 |
Msa0280360 | MtrunA17_Chr5g0418781 | 43.564 | 202 | 91 | 3 | 177 | 378 | 98 | 276 | 1.56e-44 | 155 |
Msa0280360 | MtrunA17_Chr4g0051881 | 58.779 | 131 | 53 | 1 | 149 | 278 | 123 | 253 | 8.71e-41 | 147 |
Msa0280360 | MtrunA17_Chr5g0443131 | 78.750 | 80 | 17 | 0 | 189 | 268 | 143 | 222 | 4.45e-40 | 144 |
Msa0280360 | MtrunA17_Chr8g0335811 | 66.667 | 87 | 28 | 1 | 177 | 263 | 128 | 213 | 1.44e-33 | 124 |
Msa0280360 | MtrunA17_Chr1g0150801 | 67.500 | 80 | 26 | 0 | 181 | 260 | 80 | 159 | 2.31e-33 | 122 |
Msa0280360 | MtrunA17_Chr7g0224801 | 68.000 | 75 | 24 | 0 | 191 | 265 | 81 | 155 | 7.76e-32 | 118 |
Msa0280360 | MtrunA17_Chr7g0248721 | 38.261 | 230 | 95 | 9 | 32 | 261 | 16 | 198 | 2.78e-31 | 118 |
Msa0280360 | MtrunA17_Chr3g0129361 | 57.843 | 102 | 37 | 1 | 164 | 259 | 99 | 200 | 3.18e-31 | 118 |
Msa0280360 | MtrunA17_Chr8g0383251 | 47.934 | 121 | 62 | 1 | 154 | 273 | 59 | 179 | 3.64e-31 | 117 |
Msa0280360 | MtrunA17_Chr7g0218081 | 51.818 | 110 | 49 | 1 | 159 | 264 | 362 | 471 | 2.21e-30 | 122 |
Msa0280360 | MtrunA17_Chr7g0218081 | 47.872 | 94 | 33 | 2 | 188 | 266 | 198 | 290 | 7.13e-19 | 88.2 |
Msa0280360 | MtrunA17_Chr3g0129321 | 61.039 | 77 | 30 | 0 | 189 | 265 | 104 | 180 | 3.44e-30 | 115 |
Msa0280360 | MtrunA17_Chr8g0383351 | 67.568 | 74 | 23 | 1 | 187 | 259 | 143 | 216 | 1.13e-29 | 114 |
Msa0280360 | MtrunA17_Chr5g0445311 | 50.427 | 117 | 52 | 1 | 168 | 278 | 323 | 439 | 3.91e-29 | 118 |
Msa0280360 | MtrunA17_Chr5g0445311 | 58.730 | 63 | 25 | 1 | 203 | 265 | 200 | 261 | 3.48e-16 | 80.1 |
Msa0280360 | MtrunA17_Chr5g0418191 | 64.474 | 76 | 27 | 0 | 188 | 263 | 305 | 380 | 5.59e-29 | 117 |
Msa0280360 | MtrunA17_Chr5g0418191 | 60.000 | 60 | 23 | 1 | 203 | 262 | 151 | 209 | 2.74e-16 | 80.1 |
Msa0280360 | MtrunA17_Chr3g0079691 | 65.385 | 78 | 27 | 0 | 187 | 264 | 479 | 556 | 2.34e-28 | 117 |
Msa0280360 | MtrunA17_Chr3g0079691 | 57.812 | 64 | 26 | 1 | 203 | 266 | 280 | 342 | 8.96e-18 | 85.1 |
Msa0280360 | MtrunA17_Chr3g0101131 | 56.701 | 97 | 41 | 1 | 184 | 280 | 396 | 491 | 4.17e-28 | 115 |
Msa0280360 | MtrunA17_Chr3g0101131 | 59.375 | 64 | 25 | 1 | 203 | 266 | 243 | 305 | 3.74e-17 | 83.2 |
Msa0280360 | MtrunA17_Chr8g0386241 | 50.000 | 90 | 45 | 0 | 171 | 260 | 71 | 160 | 9.80e-28 | 107 |
Msa0280360 | MtrunA17_Chr5g0432161 | 44.604 | 139 | 49 | 2 | 149 | 287 | 379 | 489 | 6.86e-27 | 112 |
Msa0280360 | MtrunA17_Chr5g0432161 | 56.667 | 60 | 25 | 1 | 203 | 262 | 244 | 302 | 2.53e-15 | 77.4 |
Msa0280360 | MtrunA17_Chr4g0042831 | 46.957 | 115 | 52 | 1 | 159 | 264 | 225 | 339 | 1.34e-26 | 109 |
Msa0280360 | MtrunA17_Chr4g0042831 | 54.688 | 64 | 29 | 0 | 203 | 266 | 145 | 208 | 1.09e-17 | 84.0 |
Msa0280360 | MtrunA17_Chr7g0249311 | 60.256 | 78 | 31 | 0 | 187 | 264 | 376 | 453 | 1.41e-26 | 111 |
Msa0280360 | MtrunA17_Chr7g0249311 | 57.812 | 64 | 26 | 1 | 203 | 266 | 179 | 241 | 3.40e-17 | 83.6 |
Msa0280360 | MtrunA17_Chr7g0249301 | 58.974 | 78 | 32 | 0 | 187 | 264 | 276 | 353 | 2.77e-26 | 108 |
Msa0280360 | MtrunA17_Chr7g0249301 | 55.385 | 65 | 28 | 1 | 202 | 266 | 61 | 124 | 1.20e-16 | 80.9 |
Msa0280360 | MtrunA17_Chr3g0106491 | 36.649 | 191 | 83 | 3 | 187 | 377 | 349 | 501 | 2.81e-26 | 110 |
Msa0280360 | MtrunA17_Chr3g0106491 | 54.545 | 66 | 29 | 1 | 203 | 268 | 198 | 262 | 1.75e-16 | 80.9 |
Msa0280360 | MtrunA17_Chr4g0004911 | 59.211 | 76 | 31 | 0 | 187 | 262 | 320 | 395 | 5.27e-26 | 108 |
Msa0280360 | MtrunA17_Chr7g0243891 | 39.597 | 149 | 74 | 2 | 132 | 264 | 287 | 435 | 6.59e-26 | 109 |
Msa0280360 | MtrunA17_Chr7g0243891 | 53.333 | 75 | 31 | 2 | 203 | 277 | 216 | 286 | 1.36e-16 | 81.3 |
Msa0280360 | MtrunA17_Chr1g0188941 | 51.899 | 79 | 38 | 0 | 184 | 262 | 32 | 110 | 1.67e-24 | 97.1 |
Msa0280360 | MtrunA17_Chr4g0075201 | 40.769 | 130 | 75 | 2 | 187 | 314 | 251 | 380 | 7.55e-24 | 102 |
Msa0280360 | MtrunA17_Chr7g0263531 | 40.299 | 134 | 71 | 2 | 145 | 270 | 296 | 428 | 8.38e-24 | 102 |
Msa0280360 | MtrunA17_Chr7g0263531 | 43.689 | 103 | 47 | 3 | 204 | 306 | 190 | 281 | 2.55e-17 | 83.2 |
Msa0280360 | MtrunA17_Chr4g0074001 | 42.105 | 114 | 66 | 0 | 153 | 266 | 309 | 422 | 1.53e-23 | 102 |
Msa0280360 | MtrunA17_Chr3g0099641 | 39.231 | 130 | 77 | 2 | 187 | 314 | 235 | 364 | 1.62e-23 | 101 |
Msa0280360 | MtrunA17_Chr7g0238921 | 68.421 | 57 | 18 | 0 | 203 | 259 | 124 | 180 | 6.34e-23 | 98.2 |
Msa0280360 | MtrunA17_Chr2g0288871 | 51.948 | 77 | 36 | 1 | 187 | 262 | 289 | 365 | 2.77e-22 | 98.6 |
Msa0280360 | MtrunA17_Chr2g0333851 | 51.163 | 86 | 39 | 2 | 185 | 267 | 149 | 234 | 3.30e-22 | 95.9 |
Msa0280360 | MtrunA17_Chr7g0270831 | 44.792 | 96 | 48 | 2 | 187 | 281 | 200 | 291 | 7.46e-22 | 96.7 |
Msa0280360 | MtrunA17_Chr2g0322391 | 47.500 | 80 | 41 | 1 | 187 | 265 | 333 | 412 | 9.02e-22 | 97.1 |
Msa0280360 | MtrunA17_Chr4g0051181 | 51.282 | 78 | 37 | 1 | 187 | 263 | 227 | 304 | 1.09e-21 | 96.3 |
Msa0280360 | MtrunA17_Chr7g0216891 | 50.649 | 77 | 37 | 1 | 190 | 265 | 206 | 282 | 4.11e-21 | 95.1 |
Msa0280360 | MtrunA17_Chr5g0447701 | 55.696 | 79 | 34 | 1 | 188 | 266 | 237 | 314 | 5.23e-21 | 93.6 |
Msa0280360 | MtrunA17_Chr5g0447701 | 52.542 | 59 | 27 | 1 | 204 | 262 | 93 | 150 | 1.32e-12 | 68.6 |
Msa0280360 | MtrunA17_Chr4g0001361 | 58.065 | 62 | 25 | 1 | 202 | 262 | 161 | 222 | 1.48e-20 | 91.3 |
Msa0280360 | MtrunA17_Chr4g0060271 | 42.553 | 94 | 53 | 1 | 170 | 262 | 222 | 315 | 2.95e-20 | 92.4 |
Msa0280360 | MtrunA17_Chr6g0485431 | 44.444 | 81 | 44 | 1 | 189 | 268 | 140 | 220 | 6.18e-20 | 90.1 |
Msa0280360 | MtrunA17_Chr2g0302391 | 45.122 | 82 | 44 | 1 | 187 | 267 | 195 | 276 | 7.37e-20 | 90.5 |
Msa0280360 | MtrunA17_Chr4g0025051 | 47.436 | 78 | 40 | 1 | 190 | 266 | 322 | 399 | 9.01e-20 | 91.3 |
Msa0280360 | MtrunA17_Chr7g0270051 | 49.315 | 73 | 36 | 1 | 204 | 275 | 54 | 126 | 3.61e-19 | 86.3 |
Msa0280360 | MtrunA17_Chr1g0147881 | 42.683 | 82 | 46 | 1 | 179 | 259 | 238 | 319 | 4.19e-19 | 87.4 |
Msa0280360 | MtrunA17_Chr4g0025061 | 47.436 | 78 | 40 | 1 | 190 | 266 | 347 | 424 | 8.63e-19 | 88.2 |
Msa0280360 | MtrunA17_Chr3g0136961 | 48.611 | 72 | 33 | 2 | 201 | 271 | 136 | 204 | 1.01e-18 | 85.9 |
Msa0280360 | MtrunA17_Chr5g0401821 | 46.341 | 82 | 43 | 1 | 179 | 259 | 175 | 256 | 1.53e-18 | 84.7 |
Msa0280360 | MtrunA17_Chr1g0150281 | 47.297 | 74 | 34 | 2 | 191 | 259 | 124 | 197 | 1.55e-18 | 85.1 |
Msa0280360 | MtrunA17_Chr3g0139021 | 40.206 | 97 | 57 | 1 | 164 | 259 | 275 | 371 | 1.97e-18 | 86.3 |
Msa0280360 | MtrunA17_Chr4g0053281 | 42.391 | 92 | 52 | 1 | 179 | 269 | 242 | 333 | 5.24e-18 | 84.3 |
Msa0280360 | MtrunA17_Chr1g0189391 | 49.296 | 71 | 35 | 1 | 190 | 259 | 84 | 154 | 7.94e-18 | 83.6 |
Msa0280360 | MtrunA17_Chr4g0071521 | 37.755 | 98 | 58 | 2 | 179 | 275 | 221 | 316 | 1.65e-17 | 82.4 |
Msa0280360 | MtrunA17_Chr1g0150271 | 51.613 | 62 | 29 | 1 | 202 | 262 | 100 | 161 | 3.73e-17 | 80.5 |
Msa0280360 | MtrunA17_Chr7g0228941 | 52.381 | 63 | 29 | 1 | 204 | 265 | 53 | 115 | 2.84e-16 | 74.7 |
Msa0280360 | MtrunA17_Chr8g0387501 | 50.000 | 62 | 30 | 1 | 202 | 262 | 128 | 189 | 3.25e-16 | 78.2 |
Msa0280360 | MtrunA17_Chr2g0293481 | 51.667 | 60 | 28 | 1 | 204 | 262 | 268 | 327 | 7.81e-16 | 79.0 |
Msa0280360 | MtrunA17_Chr5g0447711 | 45.333 | 75 | 41 | 0 | 188 | 262 | 215 | 289 | 4.13e-15 | 75.5 |
Msa0280360 | MtrunA17_Chr8g0379461 | 46.774 | 62 | 32 | 1 | 204 | 264 | 77 | 138 | 4.65e-15 | 74.3 |
Msa0280360 | MtrunA17_Chr7g0248691 | 40.698 | 86 | 42 | 3 | 179 | 262 | 136 | 214 | 4.66e-15 | 75.5 |
Msa0280360 | MtrunA17_Chr2g0289181 | 40.260 | 77 | 43 | 2 | 191 | 266 | 4 | 78 | 6.40e-15 | 73.6 |
Msa0280360 | MtrunA17_Chr1g0184691 | 50.877 | 57 | 27 | 1 | 204 | 259 | 294 | 350 | 1.14e-14 | 74.7 |
Msa0280360 | MtrunA17_Chr1g0202461 | 39.080 | 87 | 48 | 3 | 178 | 262 | 238 | 321 | 2.86e-14 | 73.6 |
Msa0280360 | MtrunA17_Chr4g0024391 | 38.462 | 78 | 47 | 1 | 190 | 266 | 216 | 293 | 3.49e-14 | 73.9 |
Msa0280360 | MtrunA17_Chr2g0284321 | 46.667 | 60 | 31 | 1 | 204 | 262 | 36 | 95 | 3.76e-14 | 71.2 |
Msa0280360 | MtrunA17_Chr3g0126391 | 39.423 | 104 | 48 | 3 | 165 | 258 | 93 | 191 | 4.31e-14 | 72.8 |
Msa0280360 | MtrunA17_Chr8g0387981 | 40.909 | 88 | 44 | 2 | 179 | 258 | 103 | 190 | 4.32e-14 | 72.8 |
Msa0280360 | MtrunA17_Chr5g0432071 | 49.206 | 63 | 31 | 1 | 203 | 265 | 104 | 165 | 5.53e-14 | 70.5 |
Msa0280360 | MtrunA17_Chr2g0319961 | 35.644 | 101 | 58 | 2 | 169 | 262 | 40 | 140 | 1.42e-13 | 70.1 |
Msa0280360 | MtrunA17_Chr2g0315361 | 33.962 | 159 | 81 | 5 | 166 | 315 | 108 | 251 | 1.57e-13 | 70.9 |
Msa0280360 | MtrunA17_Chr8g0347251 | 36.842 | 95 | 57 | 1 | 167 | 258 | 100 | 194 | 3.16e-13 | 70.1 |
Msa0280360 | MtrunA17_Chr7g0275531 | 50.000 | 60 | 27 | 1 | 202 | 258 | 117 | 176 | 4.58e-13 | 69.7 |
Msa0280360 | MtrunA17_Chr2g0315381 | 38.053 | 113 | 58 | 3 | 166 | 269 | 104 | 213 | 5.77e-13 | 68.9 |
Msa0280360 | MtrunA17_Chr3g0128671 | 29.947 | 187 | 117 | 5 | 109 | 288 | 35 | 214 | 7.68e-12 | 65.9 |
Msa0280360 | MtrunA17_Chr7g0244981 | 47.458 | 59 | 28 | 1 | 203 | 258 | 122 | 180 | 7.72e-12 | 65.5 |
Msa0280360 | MtrunA17_Chr8g0334541 | 32.331 | 133 | 73 | 5 | 162 | 291 | 63 | 181 | 6.95e-11 | 62.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0280360 | AT2G47260.1 | 44.207 | 328 | 138 | 11 | 70 | 374 | 32 | 337 | 1.36e-55 | 186 |
Msa0280360 | AT5G49520.1 | 50.472 | 212 | 69 | 5 | 172 | 368 | 190 | 380 | 5.52e-50 | 173 |
Msa0280360 | AT1G69310.4 | 70.874 | 103 | 30 | 0 | 176 | 278 | 120 | 222 | 1.20e-45 | 158 |
Msa0280360 | AT1G69310.2 | 70.874 | 103 | 30 | 0 | 176 | 278 | 120 | 222 | 1.20e-45 | 158 |
Msa0280360 | AT1G69310.1 | 70.874 | 103 | 30 | 0 | 176 | 278 | 120 | 222 | 1.20e-45 | 158 |
Msa0280360 | AT4G18170.1 | 51.220 | 164 | 65 | 3 | 118 | 266 | 72 | 235 | 1.06e-44 | 157 |
Msa0280360 | AT1G29860.1 | 46.154 | 208 | 82 | 4 | 163 | 368 | 94 | 273 | 6.70e-43 | 151 |
Msa0280360 | AT1G69310.3 | 66.990 | 103 | 30 | 1 | 176 | 278 | 120 | 218 | 5.55e-40 | 143 |
Msa0280360 | AT3G62340.1 | 41.624 | 197 | 82 | 5 | 181 | 368 | 96 | 268 | 1.91e-38 | 139 |
Msa0280360 | AT5G46350.1 | 59.649 | 114 | 44 | 1 | 153 | 266 | 135 | 246 | 6.67e-38 | 139 |
Msa0280360 | AT2G44745.1 | 63.830 | 94 | 33 | 1 | 176 | 268 | 118 | 211 | 3.75e-35 | 129 |
Msa0280360 | AT4G39410.1 | 69.412 | 85 | 25 | 1 | 176 | 259 | 195 | 279 | 8.52e-34 | 127 |
Msa0280360 | AT2G46130.1 | 60.440 | 91 | 36 | 0 | 184 | 274 | 11 | 101 | 3.08e-33 | 120 |
Msa0280360 | AT5G13080.1 | 70.423 | 71 | 21 | 0 | 190 | 260 | 54 | 124 | 4.19e-32 | 118 |
Msa0280360 | AT3G01970.1 | 63.095 | 84 | 28 | 1 | 190 | 273 | 52 | 132 | 1.46e-31 | 117 |
Msa0280360 | AT1G13960.2 | 66.667 | 75 | 25 | 0 | 188 | 262 | 241 | 315 | 8.28e-30 | 118 |
Msa0280360 | AT1G13960.2 | 57.812 | 64 | 26 | 1 | 203 | 266 | 76 | 138 | 1.10e-17 | 84.0 |
Msa0280360 | AT2G03340.1 | 62.069 | 87 | 27 | 1 | 188 | 268 | 400 | 486 | 1.08e-29 | 120 |
Msa0280360 | AT2G03340.1 | 61.667 | 60 | 22 | 1 | 203 | 262 | 250 | 308 | 2.79e-17 | 84.0 |
Msa0280360 | AT1G13960.1 | 44.118 | 136 | 63 | 1 | 140 | 262 | 333 | 468 | 3.88e-29 | 118 |
Msa0280360 | AT1G13960.1 | 57.812 | 64 | 26 | 1 | 203 | 266 | 229 | 291 | 1.42e-17 | 84.7 |
Msa0280360 | AT5G41570.1 | 59.259 | 81 | 33 | 0 | 181 | 261 | 76 | 156 | 1.02e-28 | 110 |
Msa0280360 | AT5G26170.1 | 65.278 | 72 | 25 | 0 | 190 | 261 | 100 | 171 | 2.01e-28 | 109 |
Msa0280360 | AT1G64000.1 | 59.036 | 83 | 34 | 0 | 179 | 261 | 90 | 172 | 3.41e-28 | 109 |
Msa0280360 | AT2G38470.1 | 45.802 | 131 | 59 | 2 | 184 | 302 | 343 | 473 | 4.18e-28 | 115 |
Msa0280360 | AT2G38470.1 | 56.667 | 60 | 25 | 1 | 203 | 262 | 184 | 242 | 9.55e-15 | 76.3 |
Msa0280360 | AT2G46130.2 | 56.044 | 91 | 36 | 1 | 184 | 274 | 11 | 97 | 6.55e-28 | 106 |
Msa0280360 | AT3G01080.1 | 65.333 | 75 | 26 | 0 | 188 | 262 | 291 | 365 | 1.00e-27 | 113 |
Msa0280360 | AT3G01080.1 | 57.812 | 64 | 26 | 1 | 203 | 266 | 167 | 229 | 2.20e-17 | 83.6 |
Msa0280360 | AT3G01080.2 | 65.333 | 75 | 26 | 0 | 188 | 262 | 329 | 403 | 1.20e-27 | 114 |
Msa0280360 | AT3G01080.2 | 57.812 | 64 | 26 | 1 | 203 | 266 | 205 | 267 | 2.48e-17 | 83.6 |
Msa0280360 | AT5G64810.1 | 50.000 | 98 | 46 | 1 | 179 | 273 | 86 | 183 | 1.22e-27 | 108 |
Msa0280360 | AT5G07100.2 | 47.009 | 117 | 58 | 2 | 157 | 272 | 98 | 211 | 2.04e-27 | 108 |
Msa0280360 | AT5G07100.2 | 50.000 | 64 | 32 | 0 | 203 | 266 | 24 | 87 | 2.23e-15 | 75.1 |
Msa0280360 | AT5G07100.4 | 47.009 | 117 | 58 | 2 | 157 | 272 | 98 | 211 | 2.04e-27 | 108 |
Msa0280360 | AT5G07100.4 | 50.000 | 64 | 32 | 0 | 203 | 266 | 24 | 87 | 2.23e-15 | 75.1 |
Msa0280360 | AT5G07100.5 | 47.009 | 117 | 58 | 2 | 157 | 272 | 98 | 211 | 2.04e-27 | 108 |
Msa0280360 | AT5G07100.5 | 50.000 | 64 | 32 | 0 | 203 | 266 | 24 | 87 | 2.23e-15 | 75.1 |
Msa0280360 | AT5G07100.3 | 47.009 | 117 | 58 | 2 | 157 | 272 | 98 | 211 | 2.04e-27 | 108 |
Msa0280360 | AT5G07100.3 | 50.000 | 64 | 32 | 0 | 203 | 266 | 24 | 87 | 2.23e-15 | 75.1 |
Msa0280360 | AT5G07100.1 | 47.273 | 110 | 55 | 1 | 157 | 266 | 191 | 297 | 3.63e-27 | 110 |
Msa0280360 | AT5G07100.1 | 50.000 | 64 | 32 | 0 | 203 | 266 | 117 | 180 | 3.30e-15 | 76.3 |
Msa0280360 | AT4G26640.5 | 60.494 | 81 | 32 | 0 | 184 | 264 | 186 | 266 | 5.86e-27 | 110 |
Msa0280360 | AT4G26640.5 | 59.091 | 66 | 26 | 1 | 203 | 268 | 35 | 99 | 4.14e-17 | 82.4 |
Msa0280360 | AT4G26640.6 | 60.494 | 81 | 32 | 0 | 184 | 264 | 186 | 266 | 5.86e-27 | 110 |
Msa0280360 | AT4G26640.6 | 59.091 | 66 | 26 | 1 | 203 | 268 | 35 | 99 | 4.14e-17 | 82.4 |
Msa0280360 | AT4G26640.4 | 60.494 | 81 | 32 | 0 | 184 | 264 | 186 | 266 | 5.86e-27 | 110 |
Msa0280360 | AT4G26640.4 | 59.091 | 66 | 26 | 1 | 203 | 268 | 35 | 99 | 4.14e-17 | 82.4 |
Msa0280360 | AT4G26640.3 | 60.494 | 81 | 32 | 0 | 184 | 264 | 186 | 266 | 5.86e-27 | 110 |
Msa0280360 | AT4G26640.3 | 59.091 | 66 | 26 | 1 | 203 | 268 | 35 | 99 | 4.14e-17 | 82.4 |
Msa0280360 | AT5G56270.1 | 62.821 | 78 | 29 | 0 | 187 | 264 | 471 | 548 | 9.12e-27 | 112 |
Msa0280360 | AT5G56270.1 | 54.688 | 64 | 28 | 1 | 203 | 266 | 273 | 335 | 1.20e-15 | 79.0 |
Msa0280360 | AT4G26440.1 | 45.113 | 133 | 64 | 3 | 163 | 288 | 328 | 458 | 1.01e-26 | 112 |
Msa0280360 | AT4G26440.1 | 42.268 | 97 | 55 | 1 | 170 | 266 | 145 | 240 | 3.32e-16 | 80.5 |
Msa0280360 | AT4G26640.7 | 50.000 | 110 | 52 | 1 | 158 | 264 | 293 | 402 | 1.12e-26 | 111 |
Msa0280360 | AT4G26640.7 | 59.091 | 66 | 26 | 1 | 203 | 268 | 171 | 235 | 7.60e-17 | 82.4 |
Msa0280360 | AT4G26640.1 | 50.000 | 110 | 52 | 1 | 158 | 264 | 261 | 370 | 1.26e-26 | 111 |
Msa0280360 | AT4G26640.1 | 59.091 | 66 | 26 | 1 | 203 | 268 | 139 | 203 | 6.65e-17 | 82.4 |
Msa0280360 | AT4G26640.2 | 50.926 | 108 | 50 | 1 | 158 | 262 | 333 | 440 | 1.60e-26 | 111 |
Msa0280360 | AT4G26640.2 | 59.091 | 66 | 26 | 1 | 203 | 268 | 211 | 275 | 7.55e-17 | 82.4 |
Msa0280360 | AT2G21900.1 | 48.315 | 89 | 43 | 1 | 179 | 264 | 82 | 170 | 4.41e-25 | 101 |
Msa0280360 | AT2G30250.1 | 56.627 | 83 | 36 | 0 | 184 | 266 | 309 | 391 | 1.27e-24 | 104 |
Msa0280360 | AT2G30250.1 | 53.623 | 69 | 30 | 2 | 203 | 270 | 166 | 233 | 1.59e-13 | 72.0 |
Msa0280360 | AT2G04880.2 | 58.904 | 73 | 30 | 0 | 190 | 262 | 270 | 342 | 1.77e-24 | 104 |
Msa0280360 | AT2G04880.2 | 55.738 | 61 | 26 | 1 | 202 | 262 | 110 | 169 | 7.48e-16 | 79.3 |
Msa0280360 | AT2G04880.1 | 58.904 | 73 | 30 | 0 | 190 | 262 | 294 | 366 | 2.25e-24 | 104 |
Msa0280360 | AT2G04880.1 | 41.053 | 95 | 54 | 2 | 202 | 296 | 110 | 202 | 3.93e-16 | 80.1 |
Msa0280360 | AT1G55600.1 | 57.534 | 73 | 31 | 0 | 190 | 262 | 294 | 366 | 2.62e-23 | 101 |
Msa0280360 | AT4G04450.2 | 51.948 | 77 | 36 | 1 | 187 | 262 | 182 | 258 | 1.28e-22 | 99.4 |
Msa0280360 | AT4G04450.1 | 51.948 | 77 | 36 | 1 | 187 | 262 | 276 | 352 | 4.02e-22 | 98.2 |
Msa0280360 | AT1G62300.1 | 51.948 | 77 | 36 | 1 | 187 | 262 | 296 | 372 | 4.60e-22 | 98.2 |
Msa0280360 | AT4G22070.4 | 51.948 | 77 | 36 | 1 | 187 | 262 | 281 | 357 | 5.11e-22 | 98.2 |
Msa0280360 | AT4G22070.3 | 51.948 | 77 | 36 | 1 | 187 | 262 | 281 | 357 | 5.11e-22 | 98.2 |
Msa0280360 | AT4G22070.2 | 51.948 | 77 | 36 | 1 | 187 | 262 | 281 | 357 | 5.11e-22 | 98.2 |
Msa0280360 | AT4G22070.1 | 51.948 | 77 | 36 | 1 | 187 | 262 | 281 | 357 | 5.11e-22 | 98.2 |
Msa0280360 | AT1G80840.1 | 44.554 | 101 | 50 | 3 | 166 | 263 | 110 | 207 | 8.24e-22 | 95.1 |
Msa0280360 | AT2G37260.3 | 48.039 | 102 | 43 | 3 | 158 | 259 | 234 | 325 | 9.43e-22 | 95.5 |
Msa0280360 | AT2G37260.3 | 40.171 | 117 | 61 | 3 | 204 | 312 | 86 | 201 | 7.13e-16 | 78.6 |
Msa0280360 | AT2G37260.2 | 48.039 | 102 | 43 | 3 | 158 | 259 | 232 | 323 | 9.75e-22 | 95.5 |
Msa0280360 | AT2G37260.2 | 40.171 | 117 | 61 | 3 | 204 | 312 | 84 | 199 | 7.63e-16 | 78.6 |
Msa0280360 | AT2G37260.1 | 48.039 | 102 | 43 | 3 | 158 | 259 | 314 | 405 | 1.29e-21 | 96.3 |
Msa0280360 | AT2G37260.1 | 40.171 | 117 | 61 | 3 | 204 | 312 | 166 | 281 | 1.22e-15 | 78.6 |
Msa0280360 | AT1G68150.1 | 50.000 | 78 | 38 | 1 | 187 | 263 | 219 | 296 | 6.57e-21 | 93.6 |
Msa0280360 | AT1G18860.1 | 50.649 | 77 | 37 | 1 | 187 | 262 | 223 | 299 | 8.82e-21 | 94.4 |
Msa0280360 | AT5G43290.1 | 64.912 | 57 | 20 | 0 | 203 | 259 | 114 | 170 | 2.94e-20 | 90.1 |
Msa0280360 | AT4G01720.1 | 47.561 | 82 | 42 | 1 | 182 | 262 | 218 | 299 | 3.60e-20 | 92.4 |
Msa0280360 | AT5G15130.2 | 45.238 | 84 | 45 | 1 | 183 | 265 | 165 | 248 | 3.94e-20 | 92.4 |
Msa0280360 | AT5G15130.1 | 45.238 | 84 | 45 | 1 | 183 | 265 | 207 | 290 | 4.68e-20 | 92.4 |
Msa0280360 | AT4G30935.1 | 45.977 | 87 | 40 | 1 | 177 | 263 | 312 | 391 | 1.97e-19 | 90.1 |
Msa0280360 | AT4G30935.1 | 52.542 | 59 | 27 | 1 | 204 | 262 | 169 | 226 | 3.74e-11 | 64.7 |
Msa0280360 | AT4G31800.2 | 53.846 | 65 | 29 | 1 | 202 | 265 | 110 | 174 | 6.97e-19 | 85.5 |
Msa0280360 | AT2G25000.2 | 53.846 | 65 | 29 | 1 | 202 | 265 | 102 | 166 | 9.46e-19 | 84.7 |
Msa0280360 | AT2G25000.4 | 53.846 | 65 | 29 | 1 | 202 | 265 | 102 | 166 | 9.46e-19 | 84.7 |
Msa0280360 | AT4G31800.1 | 53.846 | 65 | 29 | 1 | 202 | 265 | 175 | 239 | 1.02e-18 | 86.3 |
Msa0280360 | AT2G25000.3 | 53.846 | 65 | 29 | 1 | 202 | 265 | 124 | 188 | 1.50e-18 | 84.7 |
Msa0280360 | AT2G23320.1 | 46.341 | 82 | 43 | 1 | 179 | 259 | 216 | 297 | 1.94e-18 | 85.5 |
Msa0280360 | AT2G25000.1 | 53.846 | 65 | 29 | 1 | 202 | 265 | 145 | 209 | 2.39e-18 | 84.7 |
Msa0280360 | AT2G30590.1 | 36.697 | 109 | 65 | 2 | 156 | 260 | 263 | 371 | 4.29e-18 | 85.5 |
Msa0280360 | AT1G29280.1 | 53.968 | 63 | 28 | 1 | 204 | 265 | 75 | 137 | 4.53e-18 | 83.6 |
Msa0280360 | AT4G31550.2 | 43.902 | 82 | 45 | 1 | 179 | 259 | 221 | 302 | 7.05e-18 | 84.0 |
Msa0280360 | AT3G01080.3 | 57.812 | 64 | 26 | 1 | 203 | 266 | 205 | 267 | 1.30e-17 | 83.2 |
Msa0280360 | AT3G58710.1 | 30.952 | 210 | 108 | 7 | 195 | 382 | 63 | 257 | 1.42e-17 | 82.4 |
Msa0280360 | AT3G58710.2 | 30.952 | 210 | 108 | 7 | 195 | 382 | 62 | 256 | 1.62e-17 | 82.4 |
Msa0280360 | AT4G24240.1 | 37.097 | 124 | 76 | 2 | 137 | 259 | 216 | 338 | 3.00e-17 | 82.8 |
Msa0280360 | AT5G52830.1 | 45.882 | 85 | 40 | 3 | 179 | 262 | 146 | 225 | 3.21e-17 | 82.4 |
Msa0280360 | AT2G24570.1 | 43.902 | 82 | 45 | 1 | 179 | 259 | 219 | 300 | 3.72e-17 | 82.0 |
Msa0280360 | AT4G31550.1 | 42.683 | 82 | 46 | 1 | 179 | 259 | 222 | 303 | 4.35e-17 | 82.0 |
Msa0280360 | AT5G45050.4 | 33.939 | 165 | 94 | 4 | 109 | 262 | 941 | 1101 | 1.33e-16 | 82.4 |
Msa0280360 | AT5G45050.1 | 33.939 | 165 | 94 | 4 | 109 | 262 | 1080 | 1240 | 1.43e-16 | 82.4 |
Msa0280360 | AT5G45050.2 | 33.939 | 165 | 94 | 4 | 109 | 262 | 1052 | 1212 | 1.78e-16 | 82.0 |
Msa0280360 | AT3G04670.1 | 41.463 | 82 | 47 | 1 | 179 | 259 | 238 | 319 | 2.87e-16 | 79.3 |
Msa0280360 | AT5G28650.1 | 40.244 | 82 | 48 | 1 | 179 | 259 | 238 | 319 | 4.82e-16 | 79.0 |
Msa0280360 | AT1G69810.2 | 44.872 | 78 | 41 | 2 | 187 | 262 | 129 | 206 | 5.77e-16 | 78.6 |
Msa0280360 | AT1G69810.1 | 44.872 | 78 | 41 | 2 | 187 | 262 | 187 | 264 | 5.78e-16 | 79.3 |
Msa0280360 | AT1G30650.1 | 53.333 | 60 | 27 | 1 | 204 | 262 | 218 | 277 | 6.01e-16 | 79.3 |
Msa0280360 | AT4G01250.1 | 50.000 | 60 | 29 | 1 | 204 | 262 | 129 | 188 | 9.50e-16 | 77.4 |
Msa0280360 | AT2G34830.1 | 51.667 | 60 | 28 | 1 | 204 | 262 | 216 | 275 | 1.18e-15 | 78.6 |
Msa0280360 | AT2G34830.2 | 51.667 | 60 | 28 | 1 | 204 | 262 | 225 | 284 | 1.27e-15 | 78.6 |
Msa0280360 | AT5G45260.1 | 37.143 | 140 | 81 | 4 | 135 | 270 | 1141 | 1277 | 4.21e-15 | 77.8 |
Msa0280360 | AT1G66560.1 | 47.692 | 65 | 31 | 1 | 203 | 264 | 103 | 167 | 5.39e-14 | 71.6 |
Msa0280360 | AT1G66600.1 | 33.582 | 134 | 83 | 3 | 131 | 258 | 28 | 161 | 6.97e-14 | 71.2 |
Msa0280360 | AT2G46400.1 | 40.000 | 100 | 54 | 2 | 162 | 258 | 66 | 162 | 9.35e-14 | 71.6 |
Msa0280360 | AT4G12020.10 | 37.931 | 116 | 58 | 3 | 120 | 223 | 548 | 661 | 1.40e-13 | 73.2 |
Msa0280360 | AT4G12020.10 | 48.387 | 62 | 31 | 1 | 201 | 262 | 466 | 526 | 1.89e-12 | 69.7 |
Msa0280360 | AT4G12020.3 | 37.931 | 116 | 58 | 3 | 120 | 223 | 548 | 661 | 1.41e-13 | 73.2 |
Msa0280360 | AT4G12020.3 | 48.387 | 62 | 31 | 1 | 201 | 262 | 466 | 526 | 1.84e-12 | 69.7 |
Msa0280360 | AT4G12020.2 | 37.931 | 116 | 58 | 3 | 120 | 223 | 548 | 661 | 1.43e-13 | 73.2 |
Msa0280360 | AT4G12020.2 | 48.387 | 62 | 31 | 1 | 201 | 262 | 466 | 526 | 1.99e-12 | 69.7 |
Msa0280360 | AT4G12020.4 | 37.931 | 116 | 58 | 3 | 120 | 223 | 548 | 661 | 1.44e-13 | 73.2 |
Msa0280360 | AT4G12020.4 | 48.387 | 62 | 31 | 1 | 201 | 262 | 466 | 526 | 1.91e-12 | 69.7 |
Msa0280360 | AT4G12020.6 | 37.931 | 116 | 58 | 3 | 120 | 223 | 548 | 661 | 1.46e-13 | 73.2 |
Msa0280360 | AT4G12020.6 | 48.387 | 62 | 31 | 1 | 201 | 262 | 466 | 526 | 1.82e-12 | 69.7 |
Msa0280360 | AT4G12020.8 | 37.931 | 116 | 58 | 3 | 120 | 223 | 548 | 661 | 1.46e-13 | 73.2 |
Msa0280360 | AT4G12020.8 | 48.387 | 62 | 31 | 1 | 201 | 262 | 466 | 526 | 1.82e-12 | 69.7 |
Msa0280360 | AT4G12020.1 | 37.931 | 116 | 58 | 3 | 120 | 223 | 548 | 661 | 1.47e-13 | 73.2 |
Msa0280360 | AT4G12020.1 | 48.387 | 62 | 31 | 1 | 201 | 262 | 466 | 526 | 1.89e-12 | 69.7 |
Msa0280360 | AT4G12020.9 | 37.931 | 116 | 58 | 3 | 120 | 223 | 548 | 661 | 1.47e-13 | 73.2 |
Msa0280360 | AT4G12020.9 | 48.387 | 62 | 31 | 1 | 201 | 262 | 466 | 526 | 1.89e-12 | 69.7 |
Msa0280360 | AT4G12020.7 | 37.931 | 116 | 58 | 3 | 120 | 223 | 548 | 661 | 1.52e-13 | 73.2 |
Msa0280360 | AT4G12020.7 | 48.387 | 62 | 31 | 1 | 201 | 262 | 466 | 526 | 1.98e-12 | 69.7 |
Msa0280360 | AT4G12020.11 | 37.931 | 116 | 58 | 3 | 120 | 223 | 548 | 661 | 1.57e-13 | 72.8 |
Msa0280360 | AT4G12020.11 | 48.387 | 62 | 31 | 1 | 201 | 262 | 466 | 526 | 2.69e-12 | 68.9 |
Msa0280360 | AT4G12020.5 | 37.931 | 116 | 58 | 3 | 120 | 223 | 481 | 594 | 1.92e-13 | 72.8 |
Msa0280360 | AT4G12020.5 | 48.387 | 62 | 31 | 1 | 201 | 262 | 399 | 459 | 2.15e-12 | 69.3 |
Msa0280360 | AT4G23550.1 | 45.455 | 66 | 35 | 1 | 198 | 262 | 135 | 200 | 3.33e-13 | 70.1 |
Msa0280360 | AT4G23810.1 | 46.479 | 71 | 35 | 1 | 203 | 270 | 158 | 228 | 3.59e-13 | 70.1 |
Msa0280360 | AT4G11070.2 | 37.097 | 124 | 55 | 5 | 151 | 258 | 51 | 167 | 5.52e-13 | 69.3 |
Msa0280360 | AT4G11070.1 | 37.097 | 124 | 55 | 5 | 151 | 258 | 83 | 199 | 7.87e-13 | 68.9 |
Msa0280360 | AT3G56400.1 | 35.354 | 99 | 61 | 1 | 163 | 258 | 80 | 178 | 8.56e-13 | 68.9 |
Msa0280360 | AT1G80590.1 | 46.154 | 65 | 32 | 1 | 204 | 265 | 86 | 150 | 1.61e-12 | 67.0 |
Msa0280360 | AT2G40740.1 | 29.861 | 144 | 72 | 5 | 178 | 292 | 144 | 287 | 2.09e-12 | 67.8 |
Msa0280360 | AT2G40740.3 | 29.861 | 144 | 72 | 5 | 178 | 292 | 153 | 296 | 2.29e-12 | 67.8 |
Msa0280360 | AT5G24110.1 | 36.275 | 102 | 50 | 4 | 165 | 258 | 77 | 171 | 2.37e-12 | 67.4 |
Msa0280360 | AT2G40750.1 | 49.153 | 59 | 27 | 1 | 203 | 258 | 152 | 210 | 1.19e-11 | 65.9 |
Msa0280360 | AT1G66550.2 | 47.458 | 59 | 28 | 1 | 203 | 258 | 103 | 161 | 2.20e-11 | 63.9 |
Msa0280360 | AT1G66550.1 | 47.458 | 59 | 28 | 1 | 203 | 258 | 108 | 166 | 2.47e-11 | 63.9 |
Find 95 sgRNAs with CRISPR-Local
Find 280 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTTGTCATGAAAGCAAATC+TGG | 0.203637 | 2_3:+14915533 | None:intergenic |
GTGATTAATCATAGAGGTTT+TGG | 0.208709 | 2_3:-14914895 | Msa0280360:CDS |
TCCTAGTCTTGTCTTGATCT+TGG | 0.274700 | 2_3:+14916053 | None:intergenic |
GGCTATAGGTGGCGTAAATA+TGG | 0.275141 | 2_3:-14915486 | Msa0280360:CDS |
TAGCTTCGGTGCTGCTGCTT+CGG | 0.290732 | 2_3:-14915088 | Msa0280360:CDS |
ATCTTCTTCTTATGGTTTCA+TGG | 0.294886 | 2_3:-14916350 | Msa0280360:CDS |
ATGACATTGTAGCTTATAAA+AGG | 0.306510 | 2_3:-14914640 | Msa0280360:three_prime_UTR |
AGCTTCGGTGCTGCTGCTTC+GGG | 0.319153 | 2_3:-14915087 | Msa0280360:CDS |
TTTACCTCTATGCTGTTCTA+AGG | 0.320002 | 2_3:+14916111 | None:intergenic |
CAAAGAAGAACTCATATAAA+AGG | 0.320516 | 2_3:+14914563 | None:intergenic |
TTATGGTTTCATGGACTTGT+TGG | 0.324974 | 2_3:-14916341 | Msa0280360:CDS |
TATGGTTTCATGGACTTGTT+GGG | 0.360903 | 2_3:-14916340 | Msa0280360:CDS |
TATGTTAACACGTCGTCGTT+TGG | 0.377143 | 2_3:-14914937 | Msa0280360:CDS |
TTGTTGATGGTGGTGGTTGT+TGG | 0.398212 | 2_3:+14916454 | None:intergenic |
GTAGAGATTGAAGGCTGAAA+AGG | 0.403029 | 2_3:+14916412 | None:intergenic |
ATAGGTTTGAGTTAACCTTT+TGG | 0.412340 | 2_3:-14914686 | Msa0280360:three_prime_UTR |
TTCAATACCTCGGATGAATC+CGG | 0.413732 | 2_3:+14916199 | None:intergenic |
TGTTGTTGTTGATGTAATCA+TGG | 0.426264 | 2_3:+14916314 | None:intergenic |
GAATGCCATGGTGGTGGTGG+TGG | 0.431547 | 2_3:+14916489 | None:intergenic |
TTGTAGCTTATAAAAGGCCT+TGG | 0.432224 | 2_3:-14914634 | Msa0280360:three_prime_UTR |
ATCTTCAGGGTTTGTTAATG+AGG | 0.433650 | 2_3:-14914872 | Msa0280360:CDS |
GGTGGTGGTGGATGATGAGT+TGG | 0.447272 | 2_3:+14916513 | None:intergenic |
GAAGAAATCGAACAAGAATT+CGG | 0.447286 | 2_3:+14916163 | None:intergenic |
CCTTCTTCTAGTTATGTTGG+TGG | 0.451903 | 2_3:-14914973 | Msa0280360:CDS |
AGATGTGTAATTGTTGTTGA+TGG | 0.453874 | 2_3:+14916441 | None:intergenic |
ACAACATTAATGATTATAGA+TGG | 0.454138 | 2_3:-14914776 | Msa0280360:exon |
GGTGGTGGATGATGAGTTGG+TGG | 0.474733 | 2_3:+14916516 | None:intergenic |
TAGAGATTGAAGGCTGAAAA+GGG | 0.476382 | 2_3:+14916413 | None:intergenic |
GCAGCAGCACCGAAGCTAGT+AGG | 0.480139 | 2_3:+14915093 | None:intergenic |
ATGTGTATGTACCTGGGAAA+AGG | 0.480385 | 2_3:+14915441 | None:intergenic |
AGTAATATTATTATTACTAG+TGG | 0.482036 | 2_3:+14915014 | None:intergenic |
TGTAGCTTATAAAAGGCCTT+GGG | 0.487876 | 2_3:-14914633 | Msa0280360:three_prime_UTR |
TTAATGATTATAGATGGTAT+TGG | 0.488461 | 2_3:-14914770 | Msa0280360:exon |
GTAATTGTTGTTGATGGTGG+TGG | 0.496448 | 2_3:+14916447 | None:intergenic |
TGGTGAACGAAGCTGAGGTT+AGG | 0.496568 | 2_3:+14915117 | None:intergenic |
GTGGTGGATGATGAGTTGGT+GGG | 0.499412 | 2_3:+14916517 | None:intergenic |
GTTAACACGTCGTCGTTTGG+TGG | 0.511248 | 2_3:-14914934 | Msa0280360:CDS |
TTATTATTGTACAACAATGT+TGG | 0.511800 | 2_3:+14915042 | None:intergenic |
CAAATCAATTAACCACCAAA+AGG | 0.516209 | 2_3:+14914671 | None:intergenic |
AGGCTTTGTTAAGAGACAAT+GGG | 0.516226 | 2_3:-14914852 | Msa0280360:CDS |
AGGTTAGGACGTGACGTGGC+AGG | 0.517051 | 2_3:+14915132 | None:intergenic |
GTTCACCAACCTACTAGCTT+CGG | 0.517743 | 2_3:-14915102 | Msa0280360:CDS |
CCATCACACTCTTTCGTCAC+CGG | 0.521634 | 2_3:-14916236 | Msa0280360:CDS |
AGTTATGTTGGTGGTTCTAG+TGG | 0.524071 | 2_3:-14914964 | Msa0280360:CDS |
TTTGTCATGAAAGCAAATCT+GGG | 0.531240 | 2_3:+14915534 | None:intergenic |
AAGGATGAAATAATTCATCA+TGG | 0.535185 | 2_3:+14914515 | None:intergenic |
GGAGAATGCCATGGTGGTGG+TGG | 0.535464 | 2_3:+14916486 | None:intergenic |
GAGGCTTTGTTAAGAGACAA+TGG | 0.538083 | 2_3:-14914853 | Msa0280360:CDS |
CCACCAACATAACTAGAAGA+AGG | 0.538338 | 2_3:+14914973 | None:intergenic |
GGACGTGACGTGGCAGGAGA+AGG | 0.541957 | 2_3:+14915138 | None:intergenic |
TGTGTAATTGTTGTTGATGG+TGG | 0.542441 | 2_3:+14916444 | None:intergenic |
AGATGGCATGGTGTCAAAGA+AGG | 0.543839 | 2_3:+14916390 | None:intergenic |
ATCACCTAGATGATGGCTAT+AGG | 0.546234 | 2_3:-14915500 | Msa0280360:CDS |
TCAATACCTCGGATGAATCC+GGG | 0.548808 | 2_3:+14916200 | None:intergenic |
TCAAAGAAGGTAGAGATTGA+AGG | 0.553349 | 2_3:+14916403 | None:intergenic |
ACCGGTGAGTTCTAACATCC+CGG | 0.555255 | 2_3:-14916218 | Msa0280360:CDS |
GAAGTTGATCACCTAGATGA+TGG | 0.555999 | 2_3:-14915507 | Msa0280360:CDS |
CACCAACATAACTAGAAGAA+GGG | 0.557197 | 2_3:+14914974 | None:intergenic |
GACGACAATTGAAGAATCAT+CGG | 0.560070 | 2_3:+14915188 | None:intergenic |
TTCCTCGTCTAATGAAGCAA+CGG | 0.560515 | 2_3:-14916143 | Msa0280360:CDS |
ACCAACATAACTAGAAGAAG+GGG | 0.561388 | 2_3:+14914975 | None:intergenic |
GTTGTTGTTGATGTAATCAT+GGG | 0.562636 | 2_3:+14916315 | None:intergenic |
ATCGGAGAATGCCATGGTGG+TGG | 0.569160 | 2_3:+14916483 | None:intergenic |
GCCACCTATAGCCATCATCT+AGG | 0.569342 | 2_3:+14915496 | None:intergenic |
GTTGTTGTCGTCGTGACGGT+GGG | 0.572884 | 2_3:+14916265 | None:intergenic |
GAACAAGAATTCGGTGACAC+CGG | 0.578343 | 2_3:+14916172 | None:intergenic |
TTATGTATCAATACAAAGCA+TGG | 0.580749 | 2_3:+14916587 | None:intergenic |
GATCAAGTGATTAATCATAG+AGG | 0.582480 | 2_3:-14914901 | Msa0280360:CDS |
TGGTGGATGATGAGTTGGTG+GGG | 0.586606 | 2_3:+14916518 | None:intergenic |
TGTTGTTGTTGTCGTCGTGA+CGG | 0.589333 | 2_3:+14916261 | None:intergenic |
AATTGTCGTCACTACTTACG+AGG | 0.589893 | 2_3:-14915175 | Msa0280360:CDS |
GTCACAAGAGGAAGATGGCA+TGG | 0.590984 | 2_3:+14916378 | None:intergenic |
ACCAAGATCAAGACAAGACT+AGG | 0.598850 | 2_3:-14916054 | Msa0280360:CDS |
TGTTGTTGTCGTCGTGACGG+TGG | 0.605267 | 2_3:+14916264 | None:intergenic |
CGGTGACGAAAGAGTGTGAT+GGG | 0.606679 | 2_3:+14916237 | None:intergenic |
TCCGGGATGTTAGAACTCAC+CGG | 0.608361 | 2_3:+14916217 | None:intergenic |
CACCGGAGTGTTCAATACCT+CGG | 0.611727 | 2_3:+14916189 | None:intergenic |
TAAACAAAATCAAAATCCCA+AGG | 0.618989 | 2_3:+14914617 | None:intergenic |
CAGCACCGAAGCTAGTAGGT+TGG | 0.627050 | 2_3:+14915097 | None:intergenic |
CGTTGTACAACGGCAAGTTG+CGG | 0.640509 | 2_3:-14915237 | Msa0280360:CDS |
AACACCTTAGAACAGCATAG+AGG | 0.642711 | 2_3:-14916115 | Msa0280360:CDS |
AACCGTTGCTTCATTAGACG+AGG | 0.647141 | 2_3:+14916141 | None:intergenic |
GGTGGTTGTTGGAATCTCAT+CGG | 0.650893 | 2_3:+14916465 | None:intergenic |
CTCATCGGAGAATGCCATGG+TGG | 0.653913 | 2_3:+14916480 | None:intergenic |
AATCTCATCGGAGAATGCCA+TGG | 0.653929 | 2_3:+14916477 | None:intergenic |
CCGGTGACGAAAGAGTGTGA+TGG | 0.655487 | 2_3:+14916236 | None:intergenic |
TAGGTTGGTGAACGAAGCTG+AGG | 0.658773 | 2_3:+14915112 | None:intergenic |
ACCTAGATGATGGCTATAGG+TGG | 0.660821 | 2_3:-14915497 | Msa0280360:CDS |
GCTGAGGTTAGGACGTGACG+TGG | 0.672540 | 2_3:+14915128 | None:intergenic |
AATGGAGGAGGAGAAGAGAG+AGG | 0.674118 | 2_3:-14916551 | Msa0280360:CDS |
TAACATCCCGGATTCATCCG+AGG | 0.676510 | 2_3:-14916206 | Msa0280360:CDS |
ATCCGAGGTATTGAACACTC+CGG | 0.680816 | 2_3:-14916191 | Msa0280360:CDS |
GAGCTACTATCGTTGTACAA+CGG | 0.728393 | 2_3:-14915247 | Msa0280360:CDS |
ATTGTCGTCACTACTTACGA+GGG | 0.730012 | 2_3:-14915174 | Msa0280360:CDS |
CCAACATAACTAGAAGAAGG+GGG | 0.750249 | 2_3:+14914976 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATAAAATAAAAATAAAAAA+AGG | - | chr2_3:14914550-14914569 | Msa0280360:three_prime_UTR | 0.0% |
!! | AATAAAATAAAAATAAAAAA+AGG | - | chr2_3:14914550-14914569 | Msa0280360:three_prime_UTR | 0.0% |
!!! | AGTTTTTAATTATTGATTAA+TGG | + | chr2_3:14915155-14915174 | None:intergenic | 10.0% |
!! | TACTAAATAAAATAGAAATA+AGG | - | chr2_3:14915401-14915420 | Msa0280360:intron | 10.0% |
!! | ACTAAATAAAATAGAAATAA+GGG | - | chr2_3:14915402-14915421 | Msa0280360:intron | 10.0% |
!!! | TTCACTAATTAATTTAATTT+GGG | - | chr2_3:14915822-14915841 | Msa0280360:intron | 10.0% |
!!! | AGTTTTTAATTATTGATTAA+TGG | + | chr2_3:14915155-14915174 | None:intergenic | 10.0% |
!! | TACTAAATAAAATAGAAATA+AGG | - | chr2_3:14915401-14915420 | Msa0280360:intron | 10.0% |
!! | ACTAAATAAAATAGAAATAA+GGG | - | chr2_3:14915402-14915421 | Msa0280360:intron | 10.0% |
!!! | TTCACTAATTAATTTAATTT+GGG | - | chr2_3:14915822-14915841 | Msa0280360:intron | 10.0% |
!! | AGCATAATTATACTAATTAA+TGG | - | chr2_3:14915546-14915565 | Msa0280360:CDS | 15.0% |
!! | GTTCACTAATTAATTTAATT+TGG | - | chr2_3:14915821-14915840 | Msa0280360:intron | 15.0% |
!!! | ATAATATAATTTTTGACTTG+TGG | - | chr2_3:14915863-14915882 | Msa0280360:intron | 15.0% |
!!! | TAATATAATTTTTGACTTGT+GGG | - | chr2_3:14915864-14915883 | Msa0280360:intron | 15.0% |
!! | AGTAATATTATTATTACTAG+TGG | + | chr2_3:14916157-14916176 | None:intergenic | 15.0% |
!! | AGCATAATTATACTAATTAA+TGG | - | chr2_3:14915546-14915565 | Msa0280360:CDS | 15.0% |
!! | GTTCACTAATTAATTTAATT+TGG | - | chr2_3:14915821-14915840 | Msa0280360:intron | 15.0% |
!!! | ATAATATAATTTTTGACTTG+TGG | - | chr2_3:14915863-14915882 | Msa0280360:intron | 15.0% |
!!! | TAATATAATTTTTGACTTGT+GGG | - | chr2_3:14915864-14915883 | Msa0280360:intron | 15.0% |
!! | AGTAATATTATTATTACTAG+TGG | + | chr2_3:14916157-14916176 | None:intergenic | 15.0% |
!!! | CAACAACACTTTTTTATTAT+CGG | - | chr2_3:14914872-14914891 | Msa0280360:CDS | 20.0% |
!!! | TTTTTTTGGTTCTTTTTCTT+TGG | + | chr2_3:14915604-14915623 | None:intergenic | 20.0% |
!! | AAAGAAAAAGAACCAAAAAA+AGG | - | chr2_3:14915603-14915622 | Msa0280360:intron | 20.0% |
!! | AAGAAAATTGAGAAATGAAA+TGG | + | chr2_3:14915769-14915788 | None:intergenic | 20.0% |
!! | TTATTATTGTACAACAATGT+TGG | + | chr2_3:14916129-14916148 | None:intergenic | 20.0% |
!! | ACAACATTAATGATTATAGA+TGG | - | chr2_3:14916392-14916411 | Msa0280360:CDS | 20.0% |
!! | TTAATGATTATAGATGGTAT+TGG | - | chr2_3:14916398-14916417 | Msa0280360:CDS | 20.0% |
!!! | CAACAACACTTTTTTATTAT+CGG | - | chr2_3:14914872-14914891 | Msa0280360:CDS | 20.0% |
!!! | TTTTTTTGGTTCTTTTTCTT+TGG | + | chr2_3:14915604-14915623 | None:intergenic | 20.0% |
!! | AAAGAAAAAGAACCAAAAAA+AGG | - | chr2_3:14915603-14915622 | Msa0280360:intron | 20.0% |
!! | AAGAAAATTGAGAAATGAAA+TGG | + | chr2_3:14915769-14915788 | None:intergenic | 20.0% |
!! | TTATTATTGTACAACAATGT+TGG | + | chr2_3:14916129-14916148 | None:intergenic | 20.0% |
!! | ACAACATTAATGATTATAGA+TGG | - | chr2_3:14916392-14916411 | Msa0280360:CDS | 20.0% |
!! | TTAATGATTATAGATGGTAT+TGG | - | chr2_3:14916398-14916417 | Msa0280360:CDS | 20.0% |
! | TTATGTATCAATACAAAGCA+TGG | + | chr2_3:14914584-14914603 | None:intergenic | 25.0% |
! | CATAACAGCATAAAAATCAA+TGG | - | chr2_3:14914599-14914618 | Msa0280360:three_prime_UTR | 25.0% |
!! | AACCATAAGAAGAAGATTTT+TGG | + | chr2_3:14914815-14914834 | None:intergenic | 25.0% |
!!! | ACACTTTTTTATTATCGGAT+TGG | - | chr2_3:14914877-14914896 | Msa0280360:CDS | 25.0% |
!!! | CACTTTTTTATTATCGGATT+GGG | - | chr2_3:14914878-14914897 | Msa0280360:CDS | 25.0% |
!! | TATATATCTTTTGCAGCTAT+AGG | - | chr2_3:14916464-14916483 | Msa0280360:CDS | 25.0% |
! | ATGACATTGTAGCTTATAAA+AGG | - | chr2_3:14916528-14916547 | Msa0280360:CDS | 25.0% |
! | TAAACAAAATCAAAATCCCA+AGG | + | chr2_3:14916554-14916573 | None:intergenic | 25.0% |
! | CAAAGAAGAACTCATATAAA+AGG | + | chr2_3:14916608-14916627 | None:intergenic | 25.0% |
! | AAGGATGAAATAATTCATCA+TGG | + | chr2_3:14916656-14916675 | None:intergenic | 25.0% |
! | TTATGTATCAATACAAAGCA+TGG | + | chr2_3:14914584-14914603 | None:intergenic | 25.0% |
! | CATAACAGCATAAAAATCAA+TGG | - | chr2_3:14914599-14914618 | Msa0280360:three_prime_UTR | 25.0% |
!! | AACCATAAGAAGAAGATTTT+TGG | + | chr2_3:14914815-14914834 | None:intergenic | 25.0% |
!!! | ACACTTTTTTATTATCGGAT+TGG | - | chr2_3:14914877-14914896 | Msa0280360:CDS | 25.0% |
!!! | CACTTTTTTATTATCGGATT+GGG | - | chr2_3:14914878-14914897 | Msa0280360:CDS | 25.0% |
!! | TATATATCTTTTGCAGCTAT+AGG | - | chr2_3:14916464-14916483 | Msa0280360:CDS | 25.0% |
! | ATGACATTGTAGCTTATAAA+AGG | - | chr2_3:14916528-14916547 | Msa0280360:CDS | 25.0% |
! | TAAACAAAATCAAAATCCCA+AGG | + | chr2_3:14916554-14916573 | None:intergenic | 25.0% |
! | CAAAGAAGAACTCATATAAA+AGG | + | chr2_3:14916608-14916627 | None:intergenic | 25.0% |
! | AAGGATGAAATAATTCATCA+TGG | + | chr2_3:14916656-14916675 | None:intergenic | 25.0% |
AACAGCATAAAAATCAATGG+AGG | - | chr2_3:14914602-14914621 | Msa0280360:three_prime_UTR | 30.0% | |
! | AGATGTGTAATTGTTGTTGA+TGG | + | chr2_3:14914730-14914749 | None:intergenic | 30.0% |
GACCAAAAATCTTCTTCTTA+TGG | - | chr2_3:14914810-14914829 | Msa0280360:CDS | 30.0% | |
ATCTTCTTCTTATGGTTTCA+TGG | - | chr2_3:14914818-14914837 | Msa0280360:CDS | 30.0% | |
! | GTTGTTGTTGATGTAATCAT+GGG | + | chr2_3:14914856-14914875 | None:intergenic | 30.0% |
! | TGTTGTTGTTGATGTAATCA+TGG | + | chr2_3:14914857-14914876 | None:intergenic | 30.0% |
GAAGAAATCGAACAAGAATT+CGG | + | chr2_3:14915008-14915027 | None:intergenic | 30.0% | |
AAAAATGAAGCAGAGTTAGA+AGG | - | chr2_3:14915086-14915105 | Msa0280360:CDS | 30.0% | |
TTTGTCATGAAAGCAAATCT+GGG | + | chr2_3:14915637-14915656 | None:intergenic | 30.0% | |
AAGATTATGTGTATGTACCT+GGG | + | chr2_3:14915736-14915755 | None:intergenic | 30.0% | |
TAAGATTATGTGTATGTACC+TGG | + | chr2_3:14915737-14915756 | None:intergenic | 30.0% | |
ACTACACTGTTTATTGTAGT+AGG | + | chr2_3:14915800-14915819 | None:intergenic | 30.0% | |
GATCAAGTGATTAATCATAG+AGG | - | chr2_3:14916267-14916286 | Msa0280360:CDS | 30.0% | |
! | GTGATTAATCATAGAGGTTT+TGG | - | chr2_3:14916273-14916292 | Msa0280360:CDS | 30.0% |
!! | ATAGGTTTGAGTTAACCTTT+TGG | - | chr2_3:14916482-14916501 | Msa0280360:CDS | 30.0% |
CAAATCAATTAACCACCAAA+AGG | + | chr2_3:14916500-14916519 | None:intergenic | 30.0% | |
!! | CTTTTGGTGGTTAATTGATT+TGG | - | chr2_3:14916498-14916517 | Msa0280360:CDS | 30.0% |
AACAGCATAAAAATCAATGG+AGG | - | chr2_3:14914602-14914621 | Msa0280360:three_prime_UTR | 30.0% | |
! | AGATGTGTAATTGTTGTTGA+TGG | + | chr2_3:14914730-14914749 | None:intergenic | 30.0% |
GACCAAAAATCTTCTTCTTA+TGG | - | chr2_3:14914810-14914829 | Msa0280360:CDS | 30.0% | |
ATCTTCTTCTTATGGTTTCA+TGG | - | chr2_3:14914818-14914837 | Msa0280360:CDS | 30.0% | |
! | GTTGTTGTTGATGTAATCAT+GGG | + | chr2_3:14914856-14914875 | None:intergenic | 30.0% |
! | TGTTGTTGTTGATGTAATCA+TGG | + | chr2_3:14914857-14914876 | None:intergenic | 30.0% |
GAAGAAATCGAACAAGAATT+CGG | + | chr2_3:14915008-14915027 | None:intergenic | 30.0% | |
AAAAATGAAGCAGAGTTAGA+AGG | - | chr2_3:14915086-14915105 | Msa0280360:CDS | 30.0% | |
TTTGTCATGAAAGCAAATCT+GGG | + | chr2_3:14915637-14915656 | None:intergenic | 30.0% | |
AAGATTATGTGTATGTACCT+GGG | + | chr2_3:14915736-14915755 | None:intergenic | 30.0% | |
TAAGATTATGTGTATGTACC+TGG | + | chr2_3:14915737-14915756 | None:intergenic | 30.0% | |
ACTACACTGTTTATTGTAGT+AGG | + | chr2_3:14915800-14915819 | None:intergenic | 30.0% | |
GATCAAGTGATTAATCATAG+AGG | - | chr2_3:14916267-14916286 | Msa0280360:CDS | 30.0% | |
! | GTGATTAATCATAGAGGTTT+TGG | - | chr2_3:14916273-14916292 | Msa0280360:CDS | 30.0% |
!! | ATAGGTTTGAGTTAACCTTT+TGG | - | chr2_3:14916482-14916501 | Msa0280360:CDS | 30.0% |
CAAATCAATTAACCACCAAA+AGG | + | chr2_3:14916500-14916519 | None:intergenic | 30.0% | |
!! | CTTTTGGTGGTTAATTGATT+TGG | - | chr2_3:14916498-14916517 | Msa0280360:CDS | 30.0% |
AGCATAAAAATCAATGGAGG+AGG | - | chr2_3:14914605-14914624 | Msa0280360:three_prime_UTR | 35.0% | |
! | TGTGTAATTGTTGTTGATGG+TGG | + | chr2_3:14914727-14914746 | None:intergenic | 35.0% |
TAGAGATTGAAGGCTGAAAA+GGG | + | chr2_3:14914758-14914777 | None:intergenic | 35.0% | |
TCAAAGAAGGTAGAGATTGA+AGG | + | chr2_3:14914768-14914787 | None:intergenic | 35.0% | |
!!! | AGAAGATTTTTGGTCACAAG+AGG | + | chr2_3:14914805-14914824 | None:intergenic | 35.0% |
TTATGGTTTCATGGACTTGT+TGG | - | chr2_3:14914827-14914846 | Msa0280360:CDS | 35.0% | |
! | TATGGTTTCATGGACTTGTT+GGG | - | chr2_3:14914828-14914847 | Msa0280360:CDS | 35.0% |
TTTACCTCTATGCTGTTCTA+AGG | + | chr2_3:14915060-14915079 | None:intergenic | 35.0% | |
!!! | TGGGTTCTCTTTCCTTTTTT+TGG | + | chr2_3:14915618-14915637 | None:intergenic | 35.0% |
CTTTGTCATGAAAGCAAATC+TGG | + | chr2_3:14915638-14915657 | None:intergenic | 35.0% | |
!! | GACTGTTTTTCACAGCTTTT+TGG | + | chr2_3:14915708-14915727 | None:intergenic | 35.0% |
GACGACAATTGAAGAATCAT+CGG | + | chr2_3:14915983-14916002 | None:intergenic | 35.0% | |
ACCAACATAACTAGAAGAAG+GGG | + | chr2_3:14916196-14916215 | None:intergenic | 35.0% | |
CACCAACATAACTAGAAGAA+GGG | + | chr2_3:14916197-14916216 | None:intergenic | 35.0% | |
!!! | ATAGAGGTTTTGGATCTTCA+GGG | - | chr2_3:14916283-14916302 | Msa0280360:CDS | 35.0% |
!! | ATCTTCAGGGTTTGTTAATG+AGG | - | chr2_3:14916296-14916315 | Msa0280360:CDS | 35.0% |
!! | AGGCTTTGTTAAGAGACAAT+GGG | - | chr2_3:14916316-14916335 | Msa0280360:CDS | 35.0% |
TTGTAGCTTATAAAAGGCCT+TGG | - | chr2_3:14916534-14916553 | Msa0280360:CDS | 35.0% | |
TGTAGCTTATAAAAGGCCTT+GGG | - | chr2_3:14916535-14916554 | Msa0280360:CDS | 35.0% | |
AGCATAAAAATCAATGGAGG+AGG | - | chr2_3:14914605-14914624 | Msa0280360:three_prime_UTR | 35.0% | |
! | TGTGTAATTGTTGTTGATGG+TGG | + | chr2_3:14914727-14914746 | None:intergenic | 35.0% |
TAGAGATTGAAGGCTGAAAA+GGG | + | chr2_3:14914758-14914777 | None:intergenic | 35.0% | |
TCAAAGAAGGTAGAGATTGA+AGG | + | chr2_3:14914768-14914787 | None:intergenic | 35.0% | |
!!! | AGAAGATTTTTGGTCACAAG+AGG | + | chr2_3:14914805-14914824 | None:intergenic | 35.0% |
TTATGGTTTCATGGACTTGT+TGG | - | chr2_3:14914827-14914846 | Msa0280360:CDS | 35.0% | |
! | TATGGTTTCATGGACTTGTT+GGG | - | chr2_3:14914828-14914847 | Msa0280360:CDS | 35.0% |
TTTACCTCTATGCTGTTCTA+AGG | + | chr2_3:14915060-14915079 | None:intergenic | 35.0% | |
!!! | TGGGTTCTCTTTCCTTTTTT+TGG | + | chr2_3:14915618-14915637 | None:intergenic | 35.0% |
CTTTGTCATGAAAGCAAATC+TGG | + | chr2_3:14915638-14915657 | None:intergenic | 35.0% | |
!! | GACTGTTTTTCACAGCTTTT+TGG | + | chr2_3:14915708-14915727 | None:intergenic | 35.0% |
GACGACAATTGAAGAATCAT+CGG | + | chr2_3:14915983-14916002 | None:intergenic | 35.0% | |
ACCAACATAACTAGAAGAAG+GGG | + | chr2_3:14916196-14916215 | None:intergenic | 35.0% | |
CACCAACATAACTAGAAGAA+GGG | + | chr2_3:14916197-14916216 | None:intergenic | 35.0% | |
!!! | ATAGAGGTTTTGGATCTTCA+GGG | - | chr2_3:14916283-14916302 | Msa0280360:CDS | 35.0% |
!! | ATCTTCAGGGTTTGTTAATG+AGG | - | chr2_3:14916296-14916315 | Msa0280360:CDS | 35.0% |
!! | AGGCTTTGTTAAGAGACAAT+GGG | - | chr2_3:14916316-14916335 | Msa0280360:CDS | 35.0% |
TTGTAGCTTATAAAAGGCCT+TGG | - | chr2_3:14916534-14916553 | Msa0280360:CDS | 35.0% | |
TGTAGCTTATAAAAGGCCTT+GGG | - | chr2_3:14916535-14916554 | Msa0280360:CDS | 35.0% | |
!! | GTAATTGTTGTTGATGGTGG+TGG | + | chr2_3:14914724-14914743 | None:intergenic | 40.0% |
GTAGAGATTGAAGGCTGAAA+AGG | + | chr2_3:14914759-14914778 | None:intergenic | 40.0% | |
! | TTTTGGTCACAAGAGGAAGA+TGG | + | chr2_3:14914798-14914817 | None:intergenic | 40.0% |
TTCAATACCTCGGATGAATC+CGG | + | chr2_3:14914972-14914991 | None:intergenic | 40.0% | |
TTCCTCGTCTAATGAAGCAA+CGG | - | chr2_3:14915025-14915044 | Msa0280360:CDS | 40.0% | |
AACACCTTAGAACAGCATAG+AGG | - | chr2_3:14915053-14915072 | Msa0280360:CDS | 40.0% | |
ACCAAGATCAAGACAAGACT+AGG | - | chr2_3:14915114-14915133 | Msa0280360:CDS | 40.0% | |
!! | TCCTAGTCTTGTCTTGATCT+TGG | + | chr2_3:14915118-14915137 | None:intergenic | 40.0% |
TTAAGAAAACGCGTGATGAG+TGG | - | chr2_3:14915215-14915234 | Msa0280360:CDS | 40.0% | |
ATAGCAACGACAAGAACAGA+AGG | + | chr2_3:14915298-14915317 | None:intergenic | 40.0% | |
! | GAAGTTGATCACCTAGATGA+TGG | - | chr2_3:14915661-14915680 | Msa0280360:intron | 40.0% |
! | ATCACCTAGATGATGGCTAT+AGG | - | chr2_3:14915668-14915687 | Msa0280360:intron | 40.0% |
! | TGAAAAACAGTCCTTTTCCC+AGG | - | chr2_3:14915716-14915735 | Msa0280360:intron | 40.0% |
ATGTGTATGTACCTGGGAAA+AGG | + | chr2_3:14915730-14915749 | None:intergenic | 40.0% | |
TGTGGGACACGTAAATGTAA+CGG | - | chr2_3:14915881-14915900 | Msa0280360:intron | 40.0% | |
! | AACGGCGTTGAAACAAAAAC+AGG | - | chr2_3:14915899-14915918 | Msa0280360:intron | 40.0% |
GAGCTACTATCGTTGTACAA+CGG | - | chr2_3:14915921-14915940 | Msa0280360:intron | 40.0% | |
AATTGTCGTCACTACTTACG+AGG | - | chr2_3:14915993-14916012 | Msa0280360:intron | 40.0% | |
ATTGTCGTCACTACTTACGA+GGG | - | chr2_3:14915994-14916013 | Msa0280360:intron | 40.0% | |
CCAACATAACTAGAAGAAGG+GGG | + | chr2_3:14916195-14916214 | None:intergenic | 40.0% | |
CCACCAACATAACTAGAAGA+AGG | + | chr2_3:14916198-14916217 | None:intergenic | 40.0% | |
! | CCTTCTTCTAGTTATGTTGG+TGG | - | chr2_3:14916195-14916214 | Msa0280360:CDS | 40.0% |
!! | AGTTATGTTGGTGGTTCTAG+TGG | - | chr2_3:14916204-14916223 | Msa0280360:CDS | 40.0% |
TATGTTAACACGTCGTCGTT+TGG | - | chr2_3:14916231-14916250 | Msa0280360:CDS | 40.0% | |
!!! | CATAGAGGTTTTGGATCTTC+AGG | - | chr2_3:14916282-14916301 | Msa0280360:CDS | 40.0% |
!! | GAGGCTTTGTTAAGAGACAA+TGG | - | chr2_3:14916315-14916334 | Msa0280360:CDS | 40.0% |
!! | GGTTTGAGTTAACCTTTTGG+TGG | - | chr2_3:14916485-14916504 | Msa0280360:CDS | 40.0% |
!! | GTAATTGTTGTTGATGGTGG+TGG | + | chr2_3:14914724-14914743 | None:intergenic | 40.0% |
GTAGAGATTGAAGGCTGAAA+AGG | + | chr2_3:14914759-14914778 | None:intergenic | 40.0% | |
! | TTTTGGTCACAAGAGGAAGA+TGG | + | chr2_3:14914798-14914817 | None:intergenic | 40.0% |
TTCAATACCTCGGATGAATC+CGG | + | chr2_3:14914972-14914991 | None:intergenic | 40.0% | |
TTCCTCGTCTAATGAAGCAA+CGG | - | chr2_3:14915025-14915044 | Msa0280360:CDS | 40.0% | |
AACACCTTAGAACAGCATAG+AGG | - | chr2_3:14915053-14915072 | Msa0280360:CDS | 40.0% | |
ACCAAGATCAAGACAAGACT+AGG | - | chr2_3:14915114-14915133 | Msa0280360:CDS | 40.0% | |
!! | TCCTAGTCTTGTCTTGATCT+TGG | + | chr2_3:14915118-14915137 | None:intergenic | 40.0% |
TTAAGAAAACGCGTGATGAG+TGG | - | chr2_3:14915215-14915234 | Msa0280360:CDS | 40.0% | |
ATAGCAACGACAAGAACAGA+AGG | + | chr2_3:14915298-14915317 | None:intergenic | 40.0% | |
! | GAAGTTGATCACCTAGATGA+TGG | - | chr2_3:14915661-14915680 | Msa0280360:intron | 40.0% |
! | ATCACCTAGATGATGGCTAT+AGG | - | chr2_3:14915668-14915687 | Msa0280360:intron | 40.0% |
! | TGAAAAACAGTCCTTTTCCC+AGG | - | chr2_3:14915716-14915735 | Msa0280360:intron | 40.0% |
ATGTGTATGTACCTGGGAAA+AGG | + | chr2_3:14915730-14915749 | None:intergenic | 40.0% | |
TGTGGGACACGTAAATGTAA+CGG | - | chr2_3:14915881-14915900 | Msa0280360:intron | 40.0% | |
! | AACGGCGTTGAAACAAAAAC+AGG | - | chr2_3:14915899-14915918 | Msa0280360:intron | 40.0% |
GAGCTACTATCGTTGTACAA+CGG | - | chr2_3:14915921-14915940 | Msa0280360:intron | 40.0% | |
AATTGTCGTCACTACTTACG+AGG | - | chr2_3:14915993-14916012 | Msa0280360:intron | 40.0% | |
ATTGTCGTCACTACTTACGA+GGG | - | chr2_3:14915994-14916013 | Msa0280360:intron | 40.0% | |
CCAACATAACTAGAAGAAGG+GGG | + | chr2_3:14916195-14916214 | None:intergenic | 40.0% | |
CCACCAACATAACTAGAAGA+AGG | + | chr2_3:14916198-14916217 | None:intergenic | 40.0% | |
! | CCTTCTTCTAGTTATGTTGG+TGG | - | chr2_3:14916195-14916214 | Msa0280360:CDS | 40.0% |
!! | AGTTATGTTGGTGGTTCTAG+TGG | - | chr2_3:14916204-14916223 | Msa0280360:CDS | 40.0% |
TATGTTAACACGTCGTCGTT+TGG | - | chr2_3:14916231-14916250 | Msa0280360:CDS | 40.0% | |
!!! | CATAGAGGTTTTGGATCTTC+AGG | - | chr2_3:14916282-14916301 | Msa0280360:CDS | 40.0% |
!! | GAGGCTTTGTTAAGAGACAA+TGG | - | chr2_3:14916315-14916334 | Msa0280360:CDS | 40.0% |
!! | GGTTTGAGTTAACCTTTTGG+TGG | - | chr2_3:14916485-14916504 | Msa0280360:CDS | 40.0% |
AATCTCATCGGAGAATGCCA+TGG | + | chr2_3:14914694-14914713 | None:intergenic | 45.0% | |
GGTGGTTGTTGGAATCTCAT+CGG | + | chr2_3:14914706-14914725 | None:intergenic | 45.0% | |
!! | TTGTTGATGGTGGTGGTTGT+TGG | + | chr2_3:14914717-14914736 | None:intergenic | 45.0% |
! | AGATGGCATGGTGTCAAAGA+AGG | + | chr2_3:14914781-14914800 | None:intergenic | 45.0% |
! | TGTTGTTGTTGTCGTCGTGA+CGG | + | chr2_3:14914910-14914929 | None:intergenic | 45.0% |
TCAATACCTCGGATGAATCC+GGG | + | chr2_3:14914971-14914990 | None:intergenic | 45.0% | |
!! | ATCCGAGGTATTGAACACTC+CGG | - | chr2_3:14914977-14914996 | Msa0280360:CDS | 45.0% |
! | GAACAAGAATTCGGTGACAC+CGG | + | chr2_3:14914999-14915018 | None:intergenic | 45.0% |
AACCGTTGCTTCATTAGACG+AGG | + | chr2_3:14915030-14915049 | None:intergenic | 45.0% | |
! | ACCTAGATGATGGCTATAGG+TGG | - | chr2_3:14915671-14915690 | Msa0280360:intron | 45.0% |
GGCTATAGGTGGCGTAAATA+TGG | - | chr2_3:14915682-14915701 | Msa0280360:intron | 45.0% | |
! | GTTCACCAACCTACTAGCTT+CGG | - | chr2_3:14916066-14916085 | Msa0280360:CDS | 45.0% |
! | CCCCCTTCTTCTAGTTATGT+TGG | - | chr2_3:14916192-14916211 | Msa0280360:CDS | 45.0% |
AATCTCATCGGAGAATGCCA+TGG | + | chr2_3:14914694-14914713 | None:intergenic | 45.0% | |
GGTGGTTGTTGGAATCTCAT+CGG | + | chr2_3:14914706-14914725 | None:intergenic | 45.0% | |
!! | TTGTTGATGGTGGTGGTTGT+TGG | + | chr2_3:14914717-14914736 | None:intergenic | 45.0% |
! | AGATGGCATGGTGTCAAAGA+AGG | + | chr2_3:14914781-14914800 | None:intergenic | 45.0% |
! | TGTTGTTGTTGTCGTCGTGA+CGG | + | chr2_3:14914910-14914929 | None:intergenic | 45.0% |
TCAATACCTCGGATGAATCC+GGG | + | chr2_3:14914971-14914990 | None:intergenic | 45.0% | |
!! | ATCCGAGGTATTGAACACTC+CGG | - | chr2_3:14914977-14914996 | Msa0280360:CDS | 45.0% |
! | GAACAAGAATTCGGTGACAC+CGG | + | chr2_3:14914999-14915018 | None:intergenic | 45.0% |
AACCGTTGCTTCATTAGACG+AGG | + | chr2_3:14915030-14915049 | None:intergenic | 45.0% | |
! | ACCTAGATGATGGCTATAGG+TGG | - | chr2_3:14915671-14915690 | Msa0280360:intron | 45.0% |
GGCTATAGGTGGCGTAAATA+TGG | - | chr2_3:14915682-14915701 | Msa0280360:intron | 45.0% | |
! | GTTCACCAACCTACTAGCTT+CGG | - | chr2_3:14916066-14916085 | Msa0280360:CDS | 45.0% |
! | CCCCCTTCTTCTAGTTATGT+TGG | - | chr2_3:14916192-14916211 | Msa0280360:CDS | 45.0% |
AATGGAGGAGGAGAAGAGAG+AGG | - | chr2_3:14914617-14914636 | Msa0280360:three_prime_UTR | 50.0% | |
!! | TGGTGGATGATGAGTTGGTG+GGG | + | chr2_3:14914653-14914672 | None:intergenic | 50.0% |
!! | GTGGTGGATGATGAGTTGGT+GGG | + | chr2_3:14914654-14914673 | None:intergenic | 50.0% |
GTCACAAGAGGAAGATGGCA+TGG | + | chr2_3:14914793-14914812 | None:intergenic | 50.0% | |
! | CGGTGACGAAAGAGTGTGAT+GGG | + | chr2_3:14914934-14914953 | None:intergenic | 50.0% |
CCATCACACTCTTTCGTCAC+CGG | - | chr2_3:14914932-14914951 | Msa0280360:CDS | 50.0% | |
! | ACCGGTGAGTTCTAACATCC+CGG | - | chr2_3:14914950-14914969 | Msa0280360:CDS | 50.0% |
TCCGGGATGTTAGAACTCAC+CGG | + | chr2_3:14914954-14914973 | None:intergenic | 50.0% | |
TAACATCCCGGATTCATCCG+AGG | - | chr2_3:14914962-14914981 | Msa0280360:CDS | 50.0% | |
! | CACCGGAGTGTTCAATACCT+CGG | + | chr2_3:14914982-14915001 | None:intergenic | 50.0% |
GCCACCTATAGCCATCATCT+AGG | + | chr2_3:14915675-14915694 | None:intergenic | 50.0% | |
CGTTGTACAACGGCAAGTTG+CGG | - | chr2_3:14915931-14915950 | Msa0280360:intron | 50.0% | |
TGGTGAACGAAGCTGAGGTT+AGG | + | chr2_3:14916054-14916073 | None:intergenic | 50.0% | |
!! | TAGGTTGGTGAACGAAGCTG+AGG | + | chr2_3:14916059-14916078 | None:intergenic | 50.0% |
GTTAACACGTCGTCGTTTGG+TGG | - | chr2_3:14916234-14916253 | Msa0280360:CDS | 50.0% | |
AATGGAGGAGGAGAAGAGAG+AGG | - | chr2_3:14914617-14914636 | Msa0280360:three_prime_UTR | 50.0% | |
!! | TGGTGGATGATGAGTTGGTG+GGG | + | chr2_3:14914653-14914672 | None:intergenic | 50.0% |
!! | GTGGTGGATGATGAGTTGGT+GGG | + | chr2_3:14914654-14914673 | None:intergenic | 50.0% |
GTCACAAGAGGAAGATGGCA+TGG | + | chr2_3:14914793-14914812 | None:intergenic | 50.0% | |
! | CGGTGACGAAAGAGTGTGAT+GGG | + | chr2_3:14914934-14914953 | None:intergenic | 50.0% |
CCATCACACTCTTTCGTCAC+CGG | - | chr2_3:14914932-14914951 | Msa0280360:CDS | 50.0% | |
! | ACCGGTGAGTTCTAACATCC+CGG | - | chr2_3:14914950-14914969 | Msa0280360:CDS | 50.0% |
TCCGGGATGTTAGAACTCAC+CGG | + | chr2_3:14914954-14914973 | None:intergenic | 50.0% | |
TAACATCCCGGATTCATCCG+AGG | - | chr2_3:14914962-14914981 | Msa0280360:CDS | 50.0% | |
! | CACCGGAGTGTTCAATACCT+CGG | + | chr2_3:14914982-14915001 | None:intergenic | 50.0% |
GCCACCTATAGCCATCATCT+AGG | + | chr2_3:14915675-14915694 | None:intergenic | 50.0% | |
CGTTGTACAACGGCAAGTTG+CGG | - | chr2_3:14915931-14915950 | Msa0280360:intron | 50.0% | |
TGGTGAACGAAGCTGAGGTT+AGG | + | chr2_3:14916054-14916073 | None:intergenic | 50.0% | |
!! | TAGGTTGGTGAACGAAGCTG+AGG | + | chr2_3:14916059-14916078 | None:intergenic | 50.0% |
GTTAACACGTCGTCGTTTGG+TGG | - | chr2_3:14916234-14916253 | Msa0280360:CDS | 50.0% | |
!! | GGTGGTGGATGATGAGTTGG+TGG | + | chr2_3:14914655-14914674 | None:intergenic | 55.0% |
!! | GGTGGTGGTGGATGATGAGT+TGG | + | chr2_3:14914658-14914677 | None:intergenic | 55.0% |
ATCGGAGAATGCCATGGTGG+TGG | + | chr2_3:14914688-14914707 | None:intergenic | 55.0% | |
CTCATCGGAGAATGCCATGG+TGG | + | chr2_3:14914691-14914710 | None:intergenic | 55.0% | |
GTTGTTGTCGTCGTGACGGT+GGG | + | chr2_3:14914906-14914925 | None:intergenic | 55.0% | |
TGTTGTTGTCGTCGTGACGG+TGG | + | chr2_3:14914907-14914926 | None:intergenic | 55.0% | |
! | CCGGTGACGAAAGAGTGTGA+TGG | + | chr2_3:14914935-14914954 | None:intergenic | 55.0% |
! | CAGCACCGAAGCTAGTAGGT+TGG | + | chr2_3:14916074-14916093 | None:intergenic | 55.0% |
!! | TAGCTTCGGTGCTGCTGCTT+CGG | - | chr2_3:14916080-14916099 | Msa0280360:CDS | 55.0% |
!! | GGTGGTGGATGATGAGTTGG+TGG | + | chr2_3:14914655-14914674 | None:intergenic | 55.0% |
!! | GGTGGTGGTGGATGATGAGT+TGG | + | chr2_3:14914658-14914677 | None:intergenic | 55.0% |
ATCGGAGAATGCCATGGTGG+TGG | + | chr2_3:14914688-14914707 | None:intergenic | 55.0% | |
CTCATCGGAGAATGCCATGG+TGG | + | chr2_3:14914691-14914710 | None:intergenic | 55.0% | |
GTTGTTGTCGTCGTGACGGT+GGG | + | chr2_3:14914906-14914925 | None:intergenic | 55.0% | |
TGTTGTTGTCGTCGTGACGG+TGG | + | chr2_3:14914907-14914926 | None:intergenic | 55.0% | |
! | CCGGTGACGAAAGAGTGTGA+TGG | + | chr2_3:14914935-14914954 | None:intergenic | 55.0% |
! | CAGCACCGAAGCTAGTAGGT+TGG | + | chr2_3:14916074-14916093 | None:intergenic | 55.0% |
!! | TAGCTTCGGTGCTGCTGCTT+CGG | - | chr2_3:14916080-14916099 | Msa0280360:CDS | 55.0% |
!! | GAATGCCATGGTGGTGGTGG+TGG | + | chr2_3:14914682-14914701 | None:intergenic | 60.0% |
!! | GGAGAATGCCATGGTGGTGG+TGG | + | chr2_3:14914685-14914704 | None:intergenic | 60.0% |
! | TTGCGGCGTGAAAAAGCGCG+TGG | - | chr2_3:14915948-14915967 | Msa0280360:intron | 60.0% |
AGGTTAGGACGTGACGTGGC+AGG | + | chr2_3:14916039-14916058 | None:intergenic | 60.0% | |
GCTGAGGTTAGGACGTGACG+TGG | + | chr2_3:14916043-14916062 | None:intergenic | 60.0% | |
! | GCAGCAGCACCGAAGCTAGT+AGG | + | chr2_3:14916078-14916097 | None:intergenic | 60.0% |
!! | AGCTTCGGTGCTGCTGCTTC+GGG | - | chr2_3:14916081-14916100 | Msa0280360:CDS | 60.0% |
!! | GAATGCCATGGTGGTGGTGG+TGG | + | chr2_3:14914682-14914701 | None:intergenic | 60.0% |
!! | GGAGAATGCCATGGTGGTGG+TGG | + | chr2_3:14914685-14914704 | None:intergenic | 60.0% |
! | TTGCGGCGTGAAAAAGCGCG+TGG | - | chr2_3:14915948-14915967 | Msa0280360:intron | 60.0% |
AGGTTAGGACGTGACGTGGC+AGG | + | chr2_3:14916039-14916058 | None:intergenic | 60.0% | |
GCTGAGGTTAGGACGTGACG+TGG | + | chr2_3:14916043-14916062 | None:intergenic | 60.0% | |
! | GCAGCAGCACCGAAGCTAGT+AGG | + | chr2_3:14916078-14916097 | None:intergenic | 60.0% |
!! | AGCTTCGGTGCTGCTGCTTC+GGG | - | chr2_3:14916081-14916100 | Msa0280360:CDS | 60.0% |
!! | CATGGTGGTGGTGGTGGTGG+TGG | + | chr2_3:14914676-14914695 | None:intergenic | 65.0% |
CACCACCACCACCACCACCA+TGG | - | chr2_3:14914668-14914687 | Msa0280360:three_prime_UTR | 65.0% | |
!! | TGCCATGGTGGTGGTGGTGG+TGG | + | chr2_3:14914679-14914698 | None:intergenic | 65.0% |
GGACGTGACGTGGCAGGAGA+AGG | + | chr2_3:14916033-14916052 | None:intergenic | 65.0% | |
!! | CATGGTGGTGGTGGTGGTGG+TGG | + | chr2_3:14914676-14914695 | None:intergenic | 65.0% |
CACCACCACCACCACCACCA+TGG | - | chr2_3:14914668-14914687 | Msa0280360:three_prime_UTR | 65.0% | |
!! | TGCCATGGTGGTGGTGGTGG+TGG | + | chr2_3:14914679-14914698 | None:intergenic | 65.0% |
GGACGTGACGTGGCAGGAGA+AGG | + | chr2_3:14916033-14916052 | None:intergenic | 65.0% | |
!! | GGTGGTGGTGGTGGTGGTGG+TGG | + | chr2_3:14914667-14914686 | None:intergenic | 70.0% |
!! | GGTGGTGGTGGTGGTGGTGG+TGG | + | chr2_3:14914667-14914686 | None:intergenic | 70.0% |
!! | GGTGGTGGTGGTGGTGGTGG+TGG | + | chr2_3:14914667-14914686 | None:intergenic | 70.0% |
!! | GGTGGTGGTGGTGGTGGTGG+TGG | + | chr2_3:14914667-14914686 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_3 | gene | 14914511 | 14916679 | 14914511 | ID=Msa0280360;Name=Msa0280360 |
chr2_3 | mRNA | 14914511 | 14916679 | 14914511 | ID=Msa0280360-mRNA-1;Parent=Msa0280360;Name=Msa0280360-mRNA-1;_AED=0.05;_eAED=0.05;_QI=107|1|1|1|1|1|3|278|382 |
chr2_3 | exon | 14914511 | 14915269 | 14914511 | ID=Msa0280360-mRNA-1:exon:6274;Parent=Msa0280360-mRNA-1 |
chr2_3 | exon | 14915453 | 14915596 | 14915453 | ID=Msa0280360-mRNA-1:exon:6273;Parent=Msa0280360-mRNA-1 |
chr2_3 | exon | 14916049 | 14916679 | 14916049 | ID=Msa0280360-mRNA-1:exon:6272;Parent=Msa0280360-mRNA-1 |
chr2_3 | five_prime_UTR | 14916573 | 14916679 | 14916573 | ID=Msa0280360-mRNA-1:five_prime_utr;Parent=Msa0280360-mRNA-1 |
chr2_3 | CDS | 14916049 | 14916572 | 14916049 | ID=Msa0280360-mRNA-1:cds;Parent=Msa0280360-mRNA-1 |
chr2_3 | CDS | 14915453 | 14915596 | 14915453 | ID=Msa0280360-mRNA-1:cds;Parent=Msa0280360-mRNA-1 |
chr2_3 | CDS | 14914789 | 14915269 | 14914789 | ID=Msa0280360-mRNA-1:cds;Parent=Msa0280360-mRNA-1 |
chr2_3 | three_prime_UTR | 14914511 | 14914788 | 14914511 | ID=Msa0280360-mRNA-1:three_prime_utr;Parent=Msa0280360-mRNA-1 |
Gene Sequence |
Protein sequence |