AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1379020


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1379020 MtrunA17_Chr5g0404651 99.006 503 5 0 1 503 1 503 0.0 1035
Msa1379020 MtrunA17_Chr8g0372701 48.069 466 230 5 7 469 17 473 6.73e-160 463
Msa1379020 MtrunA17_Chr2g0315911 44.924 463 242 5 7 465 1 454 2.61e-144 422
Msa1379020 MtrunA17_Chr2g0315991 45.905 464 235 6 7 468 1 450 1.82e-143 420
Msa1379020 MtrunA17_Chr2g0315921 46.429 448 224 9 11 450 3 442 2.78e-139 409
Msa1379020 MtrunA17_Chr2g0315971 45.497 433 226 4 18 450 8 430 6.75e-137 412
Msa1379020 MtrunA17_Chr2g0315971 50.735 272 126 4 177 446 438 703 4.14e-88 285
Msa1379020 MtrunA17_Chr2g0315981 42.921 445 247 3 18 460 8 447 4.83e-135 398
Msa1379020 MtrunA17_Chr2g0316041 46.384 401 203 6 68 465 1 392 2.28e-125 373
Msa1379020 MtrunA17_Chr2g0316021 40.899 467 229 6 19 485 9 428 7.75e-125 371
Msa1379020 MtrunA17_Chr5g0404661 40.217 460 251 6 9 450 21 474 8.26e-124 370
Msa1379020 MtrunA17_Chr2g0292561 40.756 476 241 8 11 462 7 465 1.54e-121 364
Msa1379020 MtrunA17_Chr1g0155131 41.667 468 233 7 13 454 6 459 6.17e-120 360
Msa1379020 MtrunA17_Chr6g0452391 39.785 465 238 9 13 446 6 459 4.89e-114 347
Msa1379020 MtrunA17_Chr4g0072491 39.752 483 245 8 14 460 5 477 1.69e-113 345
Msa1379020 MtrunA17_Chr7g0215951 39.278 471 241 9 11 447 2 461 4.62e-113 343
Msa1379020 MtrunA17_Chr4g0059811 38.413 479 248 8 11 451 7 476 3.12e-112 342
Msa1379020 MtrunA17_Chr6g0452371 39.871 464 239 8 13 446 8 461 1.10e-111 340
Msa1379020 MtrunA17_Chr6g0452451 37.924 472 243 7 13 445 8 468 1.28e-108 333
Msa1379020 MtrunA17_Chr1g0155121 38.771 472 237 9 13 446 4 461 1.29e-106 327
Msa1379020 MtrunA17_Chr6g0452401 37.473 459 234 7 30 446 1 448 4.09e-104 320
Msa1379020 MtrunA17_Chr6g0466811 39.640 444 237 7 19 446 23 451 1.80e-103 319
Msa1379020 MtrunA17_Chr3g0134831 46.844 301 138 4 168 453 1 294 3.44e-100 303
Msa1379020 MtrunA17_Chr6g0452411 41.645 377 172 5 107 446 1 366 2.74e-98 303
Msa1379020 MtrunA17_Chr2g0308991 36.807 451 243 8 23 446 9 444 5.19e-97 303
Msa1379020 MtrunA17_Chr6g0452361 52.814 231 104 2 221 446 1 231 1.98e-81 254
Msa1379020 MtrunA17_Chr6g0452481 46.640 253 129 2 200 446 2 254 1.46e-73 235
Msa1379020 MtrunA17_Chr7g0276031 32.658 395 221 10 63 453 56 409 1.77e-65 219
Msa1379020 MtrunA17_Chr3g0127381 33.424 368 209 9 71 434 66 401 1.65e-63 214
Msa1379020 MtrunA17_Chr8g0346371 33.989 356 204 5 100 453 92 418 6.19e-61 207
Msa1379020 MtrunA17_Chr5g0404671 59.048 105 42 1 343 446 1 105 8.35e-41 144
Msa1379020 MtrunA17_Chr5g0404681 46.281 121 58 1 155 275 39 152 8.96e-37 133
Msa1379020 MtrunA17_Chr5g0404691 41.250 160 78 4 300 453 7 156 1.98e-34 127
Msa1379020 MtrunA17_Chr1g0148871 48.246 114 58 1 333 446 19 131 3.11e-29 113
Msa1379020 MtrunA17_Chr3g0145011 39.216 153 74 7 241 382 166 310 1.16e-15 79.0
Msa1379020 MtrunA17_Chr3g0141901 38.562 153 75 7 241 382 163 307 1.89e-15 78.2
Msa1379020 MtrunA17_Chr7g0217421 36.612 183 102 6 215 389 40 216 3.07e-15 77.8
Msa1379020 MtrunA17_Chr3g0108321 34.731 167 88 6 226 380 171 328 1.10e-14 75.5
Msa1379020 MtrunA17_Chr8g0362771 30.851 188 106 6 230 400 252 432 5.99e-14 74.7
Msa1379020 MtrunA17_Chr7g0262801 34.783 161 92 5 229 381 202 357 6.11e-14 73.9
Msa1379020 MtrunA17_Chr1g0182711 34.161 161 93 5 229 381 203 358 1.28e-13 72.8
Msa1379020 MtrunA17_Chr4g0050561 31.429 175 108 5 214 380 156 326 2.97e-13 71.6
Msa1379020 MtrunA17_Chr1g0192151 31.792 173 97 7 229 389 182 345 3.55e-13 71.2
Msa1379020 MtrunA17_Chr4g0014731 31.792 173 97 7 229 389 183 346 4.22e-13 71.2
Msa1379020 MtrunA17_Chr1g0211521 41.121 107 49 6 376 471 5 108 7.81e-13 65.1
Msa1379020 MtrunA17_Chr2g0315961 46.875 64 33 1 376 439 1 63 1.88e-12 62.8
Msa1379020 MtrunA17_Chr7g0260601 34.659 176 96 8 216 380 242 409 4.11e-12 68.9
Msa1379020 MtrunA17_Chr6g0476861 33.333 183 103 8 209 380 192 366 4.37e-12 68.6
Msa1379020 MtrunA17_Chr3g0143721 31.746 189 112 7 215 393 250 431 1.23e-11 67.4
Msa1379020 MtrunA17_Chr7g0248361 28.800 250 154 10 216 447 194 437 1.37e-11 67.0
Msa1379020 MtrunA17_Chr3g0135761 28.814 177 110 5 230 398 237 405 1.46e-11 67.0
Msa1379020 MtrunA17_Chr3g0094871 27.273 275 165 10 203 452 3 267 2.68e-11 65.5
Msa1379020 MtrunA17_Chr7g0255721 31.818 154 89 6 241 386 411 556 2.84e-11 66.2
Msa1379020 MtrunA17_Chr4g0031821 32.292 192 111 8 209 389 315 498 3.14e-11 65.9
Msa1379020 MtrunA17_Chr7g0255651 29.375 160 99 5 243 393 311 465 3.84e-11 65.5
Msa1379020 MtrunA17_Chr3g0135781 32.895 152 86 6 230 373 70 213 3.84e-11 62.8
Msa1379020 MtrunA17_Chr8g0388371 27.919 197 112 7 230 401 419 610 5.96e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1379020 AT5G17760.1 55.150 466 189 6 1 452 1 460 4.46e-180 515
Msa1379020 AT5G17740.1 52.442 471 200 8 1 457 1 461 3.92e-174 501
Msa1379020 AT5G17730.1 51.965 458 203 7 1 451 1 448 1.60e-167 482
Msa1379020 AT3G50930.1 49.790 476 228 4 7 474 55 527 2.51e-164 478
Msa1379020 AT2G18190.1 47.764 492 221 6 9 491 11 475 1.41e-162 470
Msa1379020 AT2G18193.1 50.452 442 199 3 16 451 17 444 3.37e-162 469
Msa1379020 AT3G50940.1 50.000 422 204 4 28 449 30 444 3.56e-156 452
Msa1379020 AT5G17750.1 47.420 407 180 4 1 404 1 376 9.31e-141 410
Msa1379020 AT5G17760.2 52.134 328 143 3 1 320 1 322 1.19e-117 350
Msa1379020 AT1G43910.1 40.717 474 233 9 1 451 4 452 1.68e-115 349
Msa1379020 AT5G40000.1 38.889 486 240 11 14 470 8 465 2.22e-115 348
Msa1379020 AT4G05380.1 42.208 462 232 12 6 450 8 451 3.47e-115 348
Msa1379020 AT3G28610.1 40.215 465 225 9 17 449 6 449 9.16e-114 345
Msa1379020 AT3G28600.1 40.000 470 229 10 15 452 5 453 1.17e-113 344
Msa1379020 AT4G25835.1 40.498 442 229 5 14 431 5 436 1.77e-113 345
Msa1379020 AT3G28540.2 39.744 468 237 8 7 443 1 454 6.44e-113 343
Msa1379020 AT3G28540.1 39.744 468 237 8 7 443 1 454 7.37e-113 343
Msa1379020 AT5G57480.1 39.278 471 238 8 14 448 5 463 8.41e-111 338
Msa1379020 AT3G28510.1 38.723 470 252 7 7 449 1 461 3.28e-109 335
Msa1379020 AT4G30250.2 40.127 471 238 8 11 448 4 463 2.39e-107 330
Msa1379020 AT4G30250.1 40.127 471 238 8 11 448 2 461 3.57e-107 329
Msa1379020 AT5G40010.1 38.022 455 241 8 13 436 7 451 2.74e-106 327
Msa1379020 AT3G28570.1 38.723 470 233 11 18 465 10 446 4.96e-103 316
Msa1379020 AT3G28570.2 38.723 470 233 11 18 465 17 453 8.03e-103 316
Msa1379020 AT3G28580.1 37.310 461 243 11 7 436 1 446 8.56e-101 312
Msa1379020 AT3G28520.1 37.449 486 246 11 22 463 2 473 6.82e-99 306
Msa1379020 AT3G28600.2 50.853 293 125 5 178 452 123 414 5.01e-97 300
Msa1379020 AT3G29800.1 36.638 464 227 14 26 479 5 411 1.38e-89 281
Msa1379020 AT3G28580.2 35.666 443 253 11 7 436 1 424 1.03e-88 280
Msa1379020 AT2G46620.1 35.864 382 202 10 63 434 55 403 1.04e-72 239
Msa1379020 AT4G05340.1 63.636 77 28 0 324 400 17 93 3.10e-28 108
Msa1379020 AT3G28560.1 27.679 224 143 5 7 224 1 211 7.48e-23 98.2
Msa1379020 AT5G43010.1 38.562 153 75 7 241 382 163 307 4.13e-15 77.8
Msa1379020 AT1G45000.1 38.562 153 75 7 241 382 163 307 5.82e-15 77.0
Msa1379020 AT5G58290.1 34.731 167 88 6 226 380 164 321 7.74e-15 77.0
Msa1379020 AT2G20140.1 34.783 161 92 5 229 381 200 355 3.82e-14 75.1
Msa1379020 AT4G29040.1 34.783 161 92 5 229 381 200 355 5.86e-14 74.3
Msa1379020 AT1G09100.1 32.370 173 96 7 229 389 182 345 9.23e-14 73.6
Msa1379020 AT5G20000.1 31.217 189 117 6 214 393 158 342 4.00e-13 71.6
Msa1379020 AT5G19990.1 31.217 189 117 6 214 393 158 342 4.25e-13 71.6
Msa1379020 AT5G19990.3 31.217 189 117 6 214 393 158 342 4.25e-13 71.6
Msa1379020 AT5G19990.2 31.429 175 108 5 214 380 100 270 6.54e-13 70.5
Msa1379020 AT3G02450.1 32.995 197 108 8 243 428 359 542 1.68e-12 70.5
Msa1379020 AT5G42270.1 30.978 184 111 6 215 389 248 424 1.04e-11 67.8
Msa1379020 AT3G56690.1 25.651 269 152 11 126 382 659 891 9.72e-11 65.1

Find 87 sgRNAs with CRISPR-Local

Find 213 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGATAAGATTCTTCATTTC+TGG 0.112367 tig0020246:+105843 None:intergenic
TACTGCTAATAGGTCTATTT+TGG 0.170805 tig0020246:-105613 Msa1379020:CDS
TCCCATGATAATCCTTTCTT+TGG 0.247677 tig0020246:-103169 Msa1379020:CDS
TTAACTTTATAGATGGATTA+TGG 0.296200 tig0020246:-103351 Msa1379020:CDS
AAAGTATAAGGAAGTTGTTT+TGG 0.306485 tig0020246:-106027 Msa1379020:CDS
CTCACAATCCGGTTAGAAAA+AGG 0.313094 tig0020246:-106203 Msa1379020:CDS
TGGATGCAGTTGACGCTATC+TGG 0.331920 tig0020246:-103379 Msa1379020:intron
TTGTATGGTCCTCCAGGAAC+TGG 0.332354 tig0020246:-105744 Msa1379020:CDS
CTCTGAGAAAACATTATGTT+TGG 0.339467 tig0020246:+106518 None:intergenic
AAACTAGATTTCCCAGTTCC+TGG 0.339978 tig0020246:+105732 None:intergenic
GGATTACTTAACTTTATAGA+TGG 0.342287 tig0020246:-103358 Msa1379020:CDS
GTTGTTGAAGAGGAAGAAAA+TGG 0.344152 tig0020246:-103041 Msa1379020:CDS
AACACTGCTTATTGTTATAG+TGG 0.352047 tig0020246:-105927 Msa1379020:CDS
ATAAGAAAGTTGGTAGGGCT+TGG 0.373964 tig0020246:-105782 Msa1379020:CDS
ATGTGCATGTCCATTCTTCC+TGG 0.376522 tig0020246:+103253 None:intergenic
ATGTTGCTTATCAAGGCTTA+AGG 0.385316 tig0020246:-102791 Msa1379020:three_prime_UTR
CATCATGCTGCTTCGTTCCA+TGG 0.388268 tig0020246:-106441 Msa1379020:CDS
AAAATAGTTCTAGTACAGTT+TGG 0.388573 tig0020246:+102714 None:intergenic
TGCTTCTTGCTACTGCTAAT+AGG 0.398837 tig0020246:-105623 Msa1379020:CDS
CCTTTCTTTGGAGAGATTGA+AGG 0.403654 tig0020246:-103157 Msa1379020:CDS
ATGTCTTATTGTTCTTATGA+AGG 0.415116 tig0020246:-103226 Msa1379020:CDS
CTGGATCTAATCTTTCTTTG+TGG 0.418635 tig0020246:+103287 None:intergenic
ATCTAGTTTGATTGCTGCTA+TGG 0.422293 tig0020246:-105718 Msa1379020:CDS
AACATTTGAAACACTTGCAA+TGG 0.424026 tig0020246:-105868 Msa1379020:CDS
ATTGTTATAGTGGTGTGAAA+TGG 0.427762 tig0020246:-105917 Msa1379020:CDS
TTTGTAATTGTGTTCAGCTA+TGG 0.430355 tig0020246:-102864 Msa1379020:exon
AAACGTGGTTATTTGTTGTA+TGG 0.444569 tig0020246:-105759 Msa1379020:CDS
CTTCCTGGCCTTAAAAGTGC+TGG 0.444730 tig0020246:+103268 None:intergenic
TTGTTATAGTGGTGTGAAAT+GGG 0.444869 tig0020246:-105916 Msa1379020:CDS
CTCCAAAGAAAGGATTATCA+TGG 0.452994 tig0020246:+103167 None:intergenic
TTCGTTCTTCATCAATTCCT+CGG 0.463547 tig0020246:+103096 None:intergenic
CCTTCTCCATGCCTCCTCTC+AGG 0.464945 tig0020246:+105558 None:intergenic
AATTCCTCGGCAACTTGTGC+AGG 0.473590 tig0020246:+103109 None:intergenic
TATTTGTTGTATGGTCCTCC+AGG 0.478870 tig0020246:-105750 Msa1379020:CDS
TAAACAGCAAAATGATATAC+AGG 0.483102 tig0020246:-105532 Msa1379020:intron
GATTATGAGAAGTAAAGAAT+GGG 0.489931 tig0020246:-102681 Msa1379020:three_prime_UTR
CTATGATGAGTGTGAGTGTA+GGG 0.494050 tig0020246:+106345 None:intergenic
CCTTCAATCTCTCCAAAGAA+AGG 0.498070 tig0020246:+103157 None:intergenic
GATATATTTGATCTTCAACT+TGG 0.500692 tig0020246:-105678 Msa1379020:CDS
TGATTATGAGAAGTAAAGAA+TGG 0.507488 tig0020246:-102682 Msa1379020:three_prime_UTR
ATGTTTGGTTTGTCAAGTGA+AGG 0.508758 tig0020246:+106533 None:intergenic
AGGAAAACCGTTGTACATAT+CGG 0.511083 tig0020246:+106169 None:intergenic
CTCATCATAGAAGAATCAAC+AGG 0.511570 tig0020246:-106332 Msa1379020:CDS
CAGCATGATGGAAGCTGTCA+TGG 0.517798 tig0020246:+106454 None:intergenic
AGGTAGCCACGGATTGGTTG+AGG 0.525058 tig0020246:+106404 None:intergenic
ATGTTGTTGTTACTCAAAGA+AGG 0.525296 tig0020246:-102913 Msa1379020:CDS
TAAGCTGAGAAAATTGTAGA+TGG 0.528567 tig0020246:+106482 None:intergenic
GACGCGGAGGCGACGCTCGA+AGG 0.532422 tig0020246:-103073 Msa1379020:CDS
TTAGCTTTATCAAGAATGAA+AGG 0.540681 tig0020246:+105993 None:intergenic
TTTGGTTTGTCAAGTGAAGG+GGG 0.549517 tig0020246:+106536 None:intergenic
GCAAGTGTTTCAAATGTTGA+AGG 0.550183 tig0020246:+105873 None:intergenic
TCATATATATTGAGAAACAT+AGG 0.557343 tig0020246:-106590 None:intergenic
TTGTAAAGGTAGCCACGGAT+TGG 0.558453 tig0020246:+106398 None:intergenic
GGTAGCGGAAGGTGTTGTAA+AGG 0.559219 tig0020246:+106384 None:intergenic
GAGAAAATTGTAGATGGTGA+AGG 0.561688 tig0020246:+106488 None:intergenic
TGTTTGGTTTGTCAAGTGAA+GGG 0.562038 tig0020246:+106534 None:intergenic
GATTTGTCAAGTTGTTGAAG+AGG 0.562772 tig0020246:-103051 Msa1379020:CDS
AGGAATGAGTTCTTGTGCCA+TGG 0.564959 tig0020246:+106424 None:intergenic
CCTGAGAGGAGGCATGGAGA+AGG 0.567782 tig0020246:-105558 Msa1379020:CDS
TCCAAAGAAAGGATTATCAT+GGG 0.577137 tig0020246:+103168 None:intergenic
GATATTCCTGAGAGGAGGCA+TGG 0.578540 tig0020246:-105564 Msa1379020:CDS
TGTACTATTACATCACTAAG+TGG 0.579899 tig0020246:-102636 Msa1379020:three_prime_UTR
GATGGATTATGGTCAAGTTG+TGG 0.580818 tig0020246:-103340 Msa1379020:CDS
GTTTGGTTTGTCAAGTGAAG+GGG 0.585310 tig0020246:+106535 None:intergenic
CAAGTGTTTCAAATGTTGAA+GGG 0.590645 tig0020246:+105874 None:intergenic
CATGGAACGAAGCAGCATGA+TGG 0.591190 tig0020246:+106442 None:intergenic
TGTATGGTCCTCCAGGAACT+GGG 0.595574 tig0020246:-105743 Msa1379020:CDS
GTTGGTAGGGCTTGGAAACG+TGG 0.595739 tig0020246:-105774 Msa1379020:CDS
ATTATGAGAAGTAAAGAATG+GGG 0.599247 tig0020246:-102680 Msa1379020:three_prime_UTR
ACTCAGCTGCATCATAGACT+TGG 0.603542 tig0020246:+106297 None:intergenic
CAAATGAATCTCCATTTGAG+AGG 0.606336 tig0020246:+106149 None:intergenic
TTGAAGAGGAAGAAAATGGA+AGG 0.607954 tig0020246:-103037 Msa1379020:CDS
AGTGTGAGTGTAGGGGAACG+TGG 0.609142 tig0020246:+106353 None:intergenic
AGGACAAGAGGTTATAAGAG+AGG 0.609200 tig0020246:-102893 Msa1379020:CDS
TCTATGATGAGTGTGAGTGT+AGG 0.612777 tig0020246:+106344 None:intergenic
GTTACTCAAAGAAGGACAAG+AGG 0.617295 tig0020246:-102905 Msa1379020:CDS
AGGTGTTGTAAAGGTAGCCA+CGG 0.626883 tig0020246:+106393 None:intergenic
CTCATTCCTCAACCAATCCG+TGG 0.640131 tig0020246:-106410 Msa1379020:CDS
GATGAAGAACGAAGACGCGG+AGG 0.643880 tig0020246:-103086 Msa1379020:CDS
AACACCTGCACAAGTTGCCG+AGG 0.645385 tig0020246:-103113 Msa1379020:CDS
GTATTGATATTCCTGAGAGG+AGG 0.657296 tig0020246:-105569 Msa1379020:CDS
AAATTAACCGATATGTACAA+CGG 0.665907 tig0020246:-106176 Msa1379020:CDS
TTATGAGAAGTAAAGAATGG+GGG 0.673182 tig0020246:-102679 Msa1379020:three_prime_UTR
CTAGATTTCCCAGTTCCTGG+AGG 0.685154 tig0020246:+105735 None:intergenic
TATGATGAGTGTGAGTGTAG+GGG 0.700365 tig0020246:+106346 None:intergenic
GCAGTATTGATATTCCTGAG+AGG 0.713312 tig0020246:-105572 Msa1379020:CDS
ATTGATGAAGAACGAAGACG+CGG 0.719308 tig0020246:-103089 Msa1379020:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTAATTAACAAACATAAAC+AGG + tig0020246:103759-103778 None:intergenic 15.0%
!! ATAAATTATGACATGAAATT+AGG - tig0020246:104231-104250 Msa1379020:intron 15.0%
!! TTAAATTGTATAAATATCCA+CGG + tig0020246:105321-105340 None:intergenic 15.0%
!!! TTAATTGATTTCATTTTAGA+TGG - tig0020246:105570-105589 Msa1379020:CDS 15.0%
!!! TAATTGATTTCATTTTAGAT+GGG - tig0020246:105571-105590 Msa1379020:CDS 15.0%
!!! AAAATTGATTTCATTTTAGA+TGG - tig0020246:105597-105616 Msa1379020:CDS 15.0%
!!! AAATTGATTTCATTTTAGAT+GGG - tig0020246:105598-105617 Msa1379020:CDS 15.0%
!!! AAGTTTTGACAAAAAGTATA+AGG - tig0020246:103108-103127 Msa1379020:CDS 20.0%
!! TGTGGTATGAAAAAATAAAT+AGG + tig0020246:103868-103887 None:intergenic 20.0%
!!! ATTTTATAAATGCATTGATG+TGG + tig0020246:103886-103905 None:intergenic 20.0%
!! TTTATAAAATTGAAGTGAAG+TGG - tig0020246:103896-103915 Msa1379020:intron 20.0%
!!! AAATTTTTTATCAGTAGCAA+TGG - tig0020246:104117-104136 Msa1379020:intron 20.0%
!! ATTGAAAGTTCTCTTTAATT+TGG - tig0020246:104304-104323 Msa1379020:intron 20.0%
!! TAAACAAACATGATAAACAA+GGG + tig0020246:104525-104544 None:intergenic 20.0%
!! CAATAATTGGTTAAGAAATT+TGG - tig0020246:104962-104981 Msa1379020:intron 20.0%
!!! TTAACTTTATAGATGGATTA+TGG - tig0020246:105796-105815 Msa1379020:CDS 20.0%
!!! TTTTGAGTCTTTCATTTTCA+GGG + tig0020246:102898-102917 None:intergenic 25.0%
!!! ATTTTGAGTCTTTCATTTTC+AGG + tig0020246:102899-102918 None:intergenic 25.0%
!!! TTGTGAGTTTTTTCTCTTTT+GGG + tig0020246:102931-102950 None:intergenic 25.0%
!!! ATTGTGAGTTTTTTCTCTTT+TGG + tig0020246:102932-102951 None:intergenic 25.0%
! AAATTAACCGATATGTACAA+CGG - tig0020246:102971-102990 Msa1379020:CDS 25.0%
!! AAAGTATAAGGAAGTTGTTT+TGG - tig0020246:103120-103139 Msa1379020:CDS 25.0%
!!! TTAGCTTTATCAAGAATGAA+AGG + tig0020246:103157-103176 None:intergenic 25.0%
! ATGATAAGATTCTTCATTTC+TGG + tig0020246:103307-103326 None:intergenic 25.0%
!!! AGAGAGTTTTATAAGAAAGT+TGG - tig0020246:103355-103374 Msa1379020:CDS 25.0%
!!! AGTTTTATAAGAAAGTTGGT+AGG - tig0020246:103359-103378 Msa1379020:CDS 25.0%
!!! GTTTTATAAGAAAGTTGGTA+GGG - tig0020246:103360-103379 Msa1379020:CDS 25.0%
! GATATATTTGATCTTCAACT+TGG - tig0020246:103469-103488 Msa1379020:intron 25.0%
! TAAACAGCAAAATGATATAC+AGG - tig0020246:103615-103634 Msa1379020:intron 25.0%
! AGCATATTACTAGAATTTCT+AGG + tig0020246:103715-103734 None:intergenic 25.0%
! AAAATAAATAGGTCTCCAAT+TGG + tig0020246:103857-103876 None:intergenic 25.0%
!!! ATTTTTTTCTAGATCCACTA+AGG + tig0020246:104202-104221 None:intergenic 25.0%
!!! GTTTTAGTTCTTGTTGATTT+TGG - tig0020246:104259-104278 Msa1379020:intron 25.0%
! AAGAAAAAGAATTCCAATTG+TGG - tig0020246:104349-104368 Msa1379020:intron 25.0%
!!! CCAAAAAAATATGCCATTTT+AGG + tig0020246:104415-104434 None:intergenic 25.0%
!!! CCTAAAATGGCATATTTTTT+TGG - tig0020246:104412-104431 Msa1379020:intron 25.0%
! CTAAACAAACATGATAAACA+AGG + tig0020246:104526-104545 None:intergenic 25.0%
!!! ACTTTCTCTCCTTTAATTTT+CGG - tig0020246:104570-104589 Msa1379020:intron 25.0%
! ACTAATTTCCCGAAAATTAA+AGG + tig0020246:104582-104601 None:intergenic 25.0%
!!! TAGTCATTTTAGTCTTTGAA+TGG - tig0020246:104598-104617 Msa1379020:intron 25.0%
!!! AGTCATTTTAGTCTTTGAAT+GGG - tig0020246:104599-104618 Msa1379020:intron 25.0%
! CTATGTATGTAAAACAGAAA+GGG + tig0020246:105176-105195 None:intergenic 25.0%
!! ATAATAGAAGTTTTACACGA+AGG + tig0020246:105271-105290 None:intergenic 25.0%
! TTCGTGTAAAACTTCTATTA+TGG - tig0020246:105270-105289 Msa1379020:intron 25.0%
! TACAGTTACTCAAAAAGAAT+TGG + tig0020246:105548-105567 None:intergenic 25.0%
! TGTCCTTGAAATTATAATGT+TGG - tig0020246:105675-105694 Msa1379020:CDS 25.0%
!! ATTTCTCATCTTGATTTTGA+TGG - tig0020246:105744-105763 Msa1379020:CDS 25.0%
! GGATTACTTAACTTTATAGA+TGG - tig0020246:105789-105808 Msa1379020:CDS 25.0%
!! ATGTCTTATTGTTCTTATGA+AGG - tig0020246:105921-105940 Msa1379020:CDS 25.0%
!!! AATTTTAGCTTCAAACTACT+TGG - tig0020246:105950-105969 Msa1379020:CDS 25.0%
!! AACAAAAATGTTGCTTATCA+AGG - tig0020246:106349-106368 Msa1379020:CDS 25.0%
!! TGTTGTAATCTTTTGCTAAT+AGG - tig0020246:106391-106410 Msa1379020:CDS 25.0%
!!! AAAATAGTTCTAGTACAGTT+TGG + tig0020246:106436-106455 None:intergenic 25.0%
! TGATTATGAGAAGTAAAGAA+TGG - tig0020246:106465-106484 Msa1379020:CDS 25.0%
! GATTATGAGAAGTAAAGAAT+GGG - tig0020246:106466-106485 Msa1379020:CDS 25.0%
! ATTATGAGAAGTAAAGAATG+GGG - tig0020246:106467-106486 Msa1379020:CDS 25.0%
! CTCTGAGAAAACATTATGTT+TGG + tig0020246:102632-102651 None:intergenic 30.0%
TAAGCTGAGAAAATTGTAGA+TGG + tig0020246:102668-102687 None:intergenic 30.0%
! TTTGAGTCTTTCATTTTCAG+GGG + tig0020246:102897-102916 None:intergenic 30.0%
AAGAGAAAAAACTCACAATC+CGG - tig0020246:102933-102952 Msa1379020:CDS 30.0%
! ATTTTTCGCCTTTTTCTAAC+CGG + tig0020246:102955-102974 None:intergenic 30.0%
AACACTGCTTATTGTTATAG+TGG - tig0020246:103220-103239 Msa1379020:CDS 30.0%
ATTGTTATAGTGGTGTGAAA+TGG - tig0020246:103230-103249 Msa1379020:CDS 30.0%
TTGTTATAGTGGTGTGAAAT+GGG - tig0020246:103231-103250 Msa1379020:CDS 30.0%
CAAGTGTTTCAAATGTTGAA+GGG + tig0020246:103276-103295 None:intergenic 30.0%
! AACATTTGAAACACTTGCAA+TGG - tig0020246:103279-103298 Msa1379020:CDS 30.0%
!! AAACGTGGTTATTTGTTGTA+TGG - tig0020246:103388-103407 Msa1379020:intron 30.0%
! TACTGCTAATAGGTCTATTT+TGG - tig0020246:103534-103553 Msa1379020:intron 30.0%
!!! CTACTTTTTTCACAACCAAT+TGG - tig0020246:103839-103858 Msa1379020:intron 30.0%
TCTTAGTGTAATAGTATGCT+TGG + tig0020246:104006-104025 None:intergenic 30.0%
AGCAATGGAATTCAATATTC+CGG - tig0020246:104132-104151 Msa1379020:intron 30.0%
AATAGCAAAGTGTGAGTTAT+TGG - tig0020246:104389-104408 Msa1379020:intron 30.0%
!! CTTTCTCTCCTTTAATTTTC+GGG - tig0020246:104571-104590 Msa1379020:intron 30.0%
TTGCAATTTCTCTTCATTCA+AGG + tig0020246:104645-104664 None:intergenic 30.0%
TTTGCAATTTATCTGCATTC+AGG - tig0020246:104794-104813 Msa1379020:intron 30.0%
TTGCAATTTATCTGCATTCA+GGG - tig0020246:104795-104814 Msa1379020:intron 30.0%
TGTGTGCAAGAGAAAATTAA+GGG + tig0020246:104869-104888 None:intergenic 30.0%
TTGTGTGCAAGAGAAAATTA+AGG + tig0020246:104870-104889 None:intergenic 30.0%
CTAACGTGTAGTTCAATAAT+TGG - tig0020246:104949-104968 Msa1379020:intron 30.0%
! TGATGATGATATATGCCATA+GGG + tig0020246:105060-105079 None:intergenic 30.0%
!! TTGATGATGATATATGCCAT+AGG + tig0020246:105061-105080 None:intergenic 30.0%
!!! TTGATAGTGAAATGGCATTT+TGG + tig0020246:105102-105121 None:intergenic 30.0%
GCTATGTATGTAAAACAGAA+AGG + tig0020246:105177-105196 None:intergenic 30.0%
! TGTTTTACATACATAGCAAG+AGG - tig0020246:105180-105199 Msa1379020:intron 30.0%
!! CAAAGGTCTTTGTTATTGAA+TGG - tig0020246:105225-105244 Msa1379020:intron 30.0%
! TTTTCATCAAAGATATTCCG+TGG - tig0020246:105301-105320 Msa1379020:intron 30.0%
CGACCAACATTATAATTTCA+AGG + tig0020246:105681-105700 None:intergenic 30.0%
TCCAAAGAAAGGATTATCAT+GGG + tig0020246:105982-106001 None:intergenic 30.0%
! ACAACAATCTAAAAAGCGTA+AGG - tig0020246:106166-106185 Msa1379020:CDS 30.0%
! ATGTTGTTGTTACTCAAAGA+AGG - tig0020246:106234-106253 Msa1379020:CDS 30.0%
TTTGTAATTGTGTTCAGCTA+TGG - tig0020246:106283-106302 Msa1379020:CDS 30.0%
TTATGAGAAGTAAAGAATGG+GGG - tig0020246:106468-106487 Msa1379020:CDS 30.0%
TGTACTATTACATCACTAAG+TGG - tig0020246:106511-106530 Msa1379020:CDS 30.0%
!! TGTTTGGTTTGTCAAGTGAA+GGG + tig0020246:102616-102635 None:intergenic 35.0%
!! ATGTTTGGTTTGTCAAGTGA+AGG + tig0020246:102617-102636 None:intergenic 35.0%
GAGAAAATTGTAGATGGTGA+AGG + tig0020246:102662-102681 None:intergenic 35.0%
CTCATCATAGAAGAATCAAC+AGG - tig0020246:102815-102834 Msa1379020:three_prime_UTR 35.0%
AGGAAAACCGTTGTACATAT+CGG + tig0020246:102981-103000 None:intergenic 35.0%
CAAATGAATCTCCATTTGAG+AGG + tig0020246:103001-103020 None:intergenic 35.0%
GCAAGTGTTTCAAATGTTGA+AGG + tig0020246:103277-103296 None:intergenic 35.0%
! ATCTAGTTTGATTGCTGCTA+TGG - tig0020246:103429-103448 Msa1379020:intron 35.0%
CAGCAAAATGATATACAGGT+TGG - tig0020246:103619-103638 Msa1379020:intron 35.0%
GCAATGGAATTCAATATTCC+GGG - tig0020246:104133-104152 Msa1379020:intron 35.0%
GTAAGTGAACTTGTAAATCC+CGG + tig0020246:104154-104173 None:intergenic 35.0%
ACACAGTCATATTCCACAAT+TGG + tig0020246:104365-104384 None:intergenic 35.0%
! TGTGAGTTATTGGCCTAAAA+TGG - tig0020246:104399-104418 Msa1379020:intron 35.0%
!!! GGCATATTTTTTTGGTAGCT+AGG - tig0020246:104420-104439 Msa1379020:intron 35.0%
!! TTTTAGTCTTTGAATGGGAG+AGG - tig0020246:104604-104623 Msa1379020:intron 35.0%
ACTAACGAAGTTTGCATTCA+GGG - tig0020246:104734-104753 Msa1379020:intron 35.0%
! AGTCACTTTAGTCCTTGAAT+CGG + tig0020246:104841-104860 None:intergenic 35.0%
GTGTGCAAGAGAAAATTAAG+GGG + tig0020246:104868-104887 None:intergenic 35.0%
! AATTTTCTCTTGCACACAAG+TGG - tig0020246:104871-104890 Msa1379020:intron 35.0%
TGAACTACACGTTAGTTCAA+TGG + tig0020246:104944-104963 None:intergenic 35.0%
!! TTCTCAAAAGCATTACCCTA+TGG - tig0020246:105042-105061 Msa1379020:intron 35.0%
! TATTGTCTAAAGCAATTGCG+TGG + tig0020246:105126-105145 None:intergenic 35.0%
!! TTGACAATACTTGCTGTCAA+AGG - tig0020246:105208-105227 Msa1379020:intron 35.0%
!! AGGTCTTTGTTATTGAATGG+TGG - tig0020246:105228-105247 Msa1379020:intron 35.0%
!! CTCATCTTGATTTTGATGGA+TGG - tig0020246:105748-105767 Msa1379020:CDS 35.0%
CTGGATCTAATCTTTCTTTG+TGG + tig0020246:105863-105882 None:intergenic 35.0%
! GATTAGATCCAGCACTTTTA+AGG - tig0020246:105871-105890 Msa1379020:CDS 35.0%
TCCCATGATAATCCTTTCTT+TGG - tig0020246:105978-105997 Msa1379020:CDS 35.0%
CTCCAAAGAAAGGATTATCA+TGG + tig0020246:105983-106002 None:intergenic 35.0%
TTCGTTCTTCATCAATTCCT+CGG + tig0020246:106054-106073 None:intergenic 35.0%
! GATTTGTCAAGTTGTTGAAG+AGG - tig0020246:106096-106115 Msa1379020:CDS 35.0%
GTTGTTGAAGAGGAAGAAAA+TGG - tig0020246:106106-106125 Msa1379020:CDS 35.0%
TTGAAGAGGAAGAAAATGGA+AGG - tig0020246:106110-106129 Msa1379020:CDS 35.0%
! ACAATCTAAAAAGCGTAAGG+TGG - tig0020246:106169-106188 Msa1379020:CDS 35.0%
! ATGTTGCTTATCAAGGCTTA+AGG - tig0020246:106356-106375 Msa1379020:CDS 35.0%
!! TTTGGTTTGTCAAGTGAAGG+GGG + tig0020246:102614-102633 None:intergenic 40.0%
!! GTTTGGTTTGTCAAGTGAAG+GGG + tig0020246:102615-102634 None:intergenic 40.0%
!!! AACGTGGTTTTATGAGGTAG+CGG + tig0020246:102781-102800 None:intergenic 40.0%
TATGATGAGTGTGAGTGTAG+GGG + tig0020246:102804-102823 None:intergenic 40.0%
CTATGATGAGTGTGAGTGTA+GGG + tig0020246:102805-102824 None:intergenic 40.0%
TCTATGATGAGTGTGAGTGT+AGG + tig0020246:102806-102825 None:intergenic 40.0%
CTCACAATCCGGTTAGAAAA+AGG - tig0020246:102944-102963 Msa1379020:CDS 40.0%
! ACAACGGTTTTCCTCTCAAA+TGG - tig0020246:102987-103006 Msa1379020:CDS 40.0%
!! ATAAGAAAGTTGGTAGGGCT+TGG - tig0020246:103365-103384 Msa1379020:CDS 40.0%
!! TATTTGTTGTATGGTCCTCC+AGG - tig0020246:103397-103416 Msa1379020:intron 40.0%
AAACTAGATTTCCCAGTTCC+TGG + tig0020246:103418-103437 None:intergenic 40.0%
TGCTTCTTGCTACTGCTAAT+AGG - tig0020246:103524-103543 Msa1379020:intron 40.0%
!! GCAGTATTGATATTCCTGAG+AGG - tig0020246:103575-103594 Msa1379020:intron 40.0%
! GTATTGATATTCCTGAGAGG+AGG - tig0020246:103578-103597 Msa1379020:intron 40.0%
GTGTCAAGGTCTCAAACAAA+AGG + tig0020246:104492-104511 None:intergenic 40.0%
ATTGCAAAACAATCCCTGCA+TGG - tig0020246:104658-104677 Msa1379020:intron 40.0%
TCAGGGACTAAAGTGACTAA+CGG - tig0020246:104687-104706 Msa1379020:intron 40.0%
ACTAACGGAGTCTACATTCA+TGG - tig0020246:104702-104721 Msa1379020:intron 40.0%
GACTAACGAAGTTTGCATTC+AGG - tig0020246:104733-104752 Msa1379020:intron 40.0%
ACACCCTGAATAGGTACATT+GGG - tig0020246:104917-104936 Msa1379020:intron 40.0%
!! TGCGTGGATTGATAGTGAAA+TGG + tig0020246:105110-105129 None:intergenic 40.0%
! ATTGAATGGTGGAAACCTCA+TGG - tig0020246:105239-105258 Msa1379020:intron 40.0%
! TTGAATGGTGGAAACCTCAT+GGG - tig0020246:105240-105259 Msa1379020:intron 40.0%
!! GATGGATTATGGTCAAGTTG+TGG - tig0020246:105807-105826 Msa1379020:CDS 40.0%
!!! ACTTTTAAGGCCAGGAAGAA+TGG - tig0020246:105884-105903 Msa1379020:CDS 40.0%
CCTTCAATCTCTCCAAAGAA+AGG + tig0020246:105993-106012 None:intergenic 40.0%
! CCTTTCTTTGGAGAGATTGA+AGG - tig0020246:105990-106009 Msa1379020:CDS 40.0%
ATTGATGAAGAACGAAGACG+CGG - tig0020246:106058-106077 Msa1379020:CDS 40.0%
! TCTAAAAAGCGTAAGGTGGT+TGG - tig0020246:106173-106192 Msa1379020:CDS 40.0%
GTTACTCAAAGAAGGACAAG+AGG - tig0020246:106242-106261 Msa1379020:CDS 40.0%
AGGACAAGAGGTTATAAGAG+AGG - tig0020246:106254-106273 Msa1379020:CDS 40.0%
AGGAATGAGTTCTTGTGCCA+TGG + tig0020246:102726-102745 None:intergenic 45.0%
TTGTAAAGGTAGCCACGGAT+TGG + tig0020246:102752-102771 None:intergenic 45.0%
! AGGTGTTGTAAAGGTAGCCA+CGG + tig0020246:102757-102776 None:intergenic 45.0%
!!! TGGTTTTATGAGGTAGCGGA+AGG + tig0020246:102777-102796 None:intergenic 45.0%
!!! TAGGGGAACGTGGTTTTATG+AGG + tig0020246:102787-102806 None:intergenic 45.0%
ACTCAGCTGCATCATAGACT+TGG + tig0020246:102853-102872 None:intergenic 45.0%
ACCACTTGACTAGACCTTAG+TGG - tig0020246:104185-104204 Msa1379020:intron 45.0%
TCCACTAAGGTCTAGTCAAG+TGG + tig0020246:104189-104208 None:intergenic 45.0%
TGAATCAGAACCCACATGCT+AGG + tig0020246:104451-104470 None:intergenic 45.0%
TTGAGACCTTGACACTTGAC+AGG - tig0020246:104497-104516 Msa1379020:intron 45.0%
ATCCCTGCATGGTCAATTTC+AGG - tig0020246:104669-104688 Msa1379020:intron 45.0%
TCCCTGCATGGTCAATTTCA+GGG - tig0020246:104670-104689 Msa1379020:intron 45.0%
TCCCTGAAATTGACCATGCA+GGG + tig0020246:104674-104693 None:intergenic 45.0%
GACGAATCTCTTCCGATTCA+AGG - tig0020246:104826-104845 Msa1379020:intron 45.0%
CACACCCTGAATAGGTACAT+TGG - tig0020246:104916-104935 Msa1379020:intron 45.0%
GGTCCCAATGTACCTATTCA+GGG + tig0020246:104923-104942 None:intergenic 45.0%
TGGTCCCAATGTACCTATTC+AGG + tig0020246:104924-104943 None:intergenic 45.0%
!! ACACTAGCTTGCTCTTGAAG+GGG + tig0020246:105493-105512 None:intergenic 45.0%
!! CACACTAGCTTGCTCTTGAA+GGG + tig0020246:105494-105513 None:intergenic 45.0%
!! TCACACTAGCTTGCTCTTGA+AGG + tig0020246:105495-105514 None:intergenic 45.0%
ATGTGCATGTCCATTCTTCC+TGG + tig0020246:105897-105916 None:intergenic 45.0%
GTTGGTTGCAAGCAAAAACG+AGG - tig0020246:106191-106210 Msa1379020:CDS 45.0%
! CAGCATGATGGAAGCTGTCA+TGG + tig0020246:102696-102715 None:intergenic 50.0%
CATGGAACGAAGCAGCATGA+TGG + tig0020246:102708-102727 None:intergenic 50.0%
! CATCATGCTGCTTCGTTCCA+TGG - tig0020246:102706-102725 Msa1379020:three_prime_UTR 50.0%
CTCATTCCTCAACCAATCCG+TGG - tig0020246:102737-102756 Msa1379020:three_prime_UTR 50.0%
!! GGTAGCGGAAGGTGTTGTAA+AGG + tig0020246:102766-102785 None:intergenic 50.0%
TTGTATGGTCCTCCAGGAAC+TGG - tig0020246:103403-103422 Msa1379020:intron 50.0%
TGTATGGTCCTCCAGGAACT+GGG - tig0020246:103404-103423 Msa1379020:intron 50.0%
CTAGATTTCCCAGTTCCTGG+AGG + tig0020246:103415-103434 None:intergenic 50.0%
GATATTCCTGAGAGGAGGCA+TGG - tig0020246:103583-103602 Msa1379020:intron 50.0%
AGGGAACCTGTCAAGTGTCA+AGG + tig0020246:104506-104525 None:intergenic 50.0%
GTCCCTGAAATTGACCATGC+AGG + tig0020246:104675-104694 None:intergenic 50.0%
CCTATTCAGGGTGTGTGCTA+TGG + tig0020246:104911-104930 None:intergenic 50.0%
CCATAGCACACACCCTGAAT+AGG - tig0020246:104908-104927 Msa1379020:intron 50.0%
ACACGAAGGATCATCCCATG+AGG + tig0020246:105257-105276 None:intergenic 50.0%
TGGATGCAGTTGACGCTATC+TGG - tig0020246:105768-105787 Msa1379020:CDS 50.0%
!!! GATCCAGCACTTTTAAGGCC+AGG - tig0020246:105876-105895 Msa1379020:CDS 50.0%
!! CTTCCTGGCCTTAAAAGTGC+TGG + tig0020246:105882-105901 None:intergenic 50.0%
AATTCCTCGGCAACTTGTGC+AGG + tig0020246:106041-106060 None:intergenic 50.0%
GGTTGCAAGCAAAAACGAGG+TGG - tig0020246:106194-106213 Msa1379020:CDS 50.0%
TGCAAGCAAAAACGAGGTGG+TGG - tig0020246:106197-106216 Msa1379020:CDS 50.0%
GCAAGCAAAAACGAGGTGGT+GGG - tig0020246:106198-106217 Msa1379020:CDS 50.0%
!! AGGTAGCCACGGATTGGTTG+AGG + tig0020246:102746-102765 None:intergenic 55.0%
AGTGTGAGTGTAGGGGAACG+TGG + tig0020246:102797-102816 None:intergenic 55.0%
! GTTGGTAGGGCTTGGAAACG+TGG - tig0020246:103373-103392 Msa1379020:CDS 55.0%
CTAGGCCTAGCCTAGCATGT+GGG - tig0020246:104438-104457 Msa1379020:intron 55.0%
CAGAACCCACATGCTAGGCT+AGG + tig0020246:104446-104465 None:intergenic 55.0%
AACACCTGCACAAGTTGCCG+AGG - tig0020246:106034-106053 Msa1379020:CDS 55.0%
GATGAAGAACGAAGACGCGG+AGG - tig0020246:106061-106080 Msa1379020:CDS 55.0%
CCTTCTCCATGCCTCCTCTC+AGG + tig0020246:103592-103611 None:intergenic 60.0%
! CCTGAGAGGAGGCATGGAGA+AGG - tig0020246:103589-103608 Msa1379020:intron 60.0%
GCTAGGCCTAGCCTAGCATG+TGG - tig0020246:104437-104456 Msa1379020:intron 60.0%
GACGCGGAGGCGACGCTCGA+AGG - tig0020246:106074-106093 Msa1379020:CDS 75.0%
Chromosome Type Strat End Strand Name
tig0020246 gene 102568 106601 102568 ID=Msa1379020;Name=Msa1379020
tig0020246 mRNA 102568 106601 102568 ID=Msa1379020-mRNA-1;Parent=Msa1379020;Name=Msa1379020-mRNA-1;_AED=0.09;_eAED=0.09;_QI=70|1|1|1|1|1|2|312|503
tig0020246 exon 102568 103392 102568 ID=Msa1379020-mRNA-1:exon:6302;Parent=Msa1379020-mRNA-1
tig0020246 exon 105533 106601 105533 ID=Msa1379020-mRNA-1:exon:6301;Parent=Msa1379020-mRNA-1
tig0020246 five_prime_UTR 106532 106601 106532 ID=Msa1379020-mRNA-1:five_prime_utr;Parent=Msa1379020-mRNA-1
tig0020246 CDS 105533 106531 105533 ID=Msa1379020-mRNA-1:cds;Parent=Msa1379020-mRNA-1
tig0020246 CDS 102880 103392 102880 ID=Msa1379020-mRNA-1:cds;Parent=Msa1379020-mRNA-1
tig0020246 three_prime_UTR 102568 102879 102568 ID=Msa1379020-mRNA-1:three_prime_utr;Parent=Msa1379020-mRNA-1
Gene Sequence

>Msa1379020

ATGTTTTCTCAGAGAGAAATGCCTTCACCATCTACAATTTTCTCAGCTTATGCATCCATGACAGCTTCCATCATGCTGCTTCGTTCCATGGCACAAGAACTCATTCCTCAACCAATCCGTGGCTACCTTTACAACACCTTCCGCTACCTCATAAAACCACGTTCCCCTACACTCACACTCATCATAGAAGAATCAACAGGCATAACACGTAACCAAGTCTATGATGCAGCTGAGTCTTATCTCTCAACAAAAGTCACCCCTGAAAATGAAAGACTCAAAATCAGCAAAGTCCCAAAAGAGAAAAAACTCACAATCCGGTTAGAAAAAGGCGAAAAATTAACCGATATGTACAACGGTTTTCCTCTCAAATGGAGATTCATTTGTGCTGAAACTGAGAAAAACAGTGCAAATGATATGCAGAACAATAATAACAGTGTATCTGTTAGATCAGAGAAAAAATATTTTGAACTAAGTTTTGACAAAAAGTATAAGGAAGTTGTTTTGGATTCTTATCTTCCTTTCATTCTTGATAAAGCTAAAGAAATGAAAGATGAAGAAAGAGTGTTGAAAATGCATACATTAAACACTGCTTATTGTTATAGTGGTGTGAAATGGGATTCTATAAATCTTGAACACCCTTCAACATTTGAAACACTTGCAATGGAACCAGAAATGAAGAATCTTATCATAGAAGATTTGAACATGTTTGTGAAGAGAAGAGAGTTTTATAAGAAAGTTGGTAGGGCTTGGAAACGTGGTTATTTGTTGTATGGTCCTCCAGGAACTGGGAAATCTAGTTTGATTGCTGCTATGGCTAATTATTTGAAGTTTGATATATTTGATCTTCAACTTGGAAACATTGTTAGAGATTCTGATCTTAGAAAGTTGCTTCTTGCTACTGCTAATAGGTCTATTTTGGTTATTGAAGATATTGATTGCAGTATTGATATTCCTGAGAGGAGGCATGGAGAAGGACGTAAACAGCAAAATGATATACAGTTGACGCTATCTGGATTACTTAACTTTATAGATGGATTATGGTCAAGTTGTGGAGACGAGAGAATCATCATATTTACAACTAACCACAAAGAAAGATTAGATCCAGCACTTTTAAGGCCAGGAAGAATGGACATGCACATTCATATGTCTTATTGTTCTTATGAAGGTTTCAAAATTTTAGCTTCAAACTACTTGGATATTTCCCATGATAATCCTTTCTTTGGAGAGATTGAAGGACTAATTGAAGACATACAAATAACACCTGCACAAGTTGCCGAGGAATTGATGAAGAACGAAGACGCGGAGGCGACGCTCGAAGGATTTGTCAAGTTGTTGAAGAGGAAGAAAATGGAAGGTGATGTGTGTGAGAATAACAACAATAAAATAGAACAACAATCTAAAAAGCGTAAGGTGGTTGGTTGCAAGCAAAAACGAGGTGGTGGGAATAGCAAGAGCAATGTTGTTGTTACTCAAAGAAGGACAAGAGGTTATAAGAGAGGTTCTAGTTTGTAA

Protein sequence

>Msa1379020

MFSQREMPSPSTIFSAYASMTASIMLLRSMAQELIPQPIRGYLYNTFRYLIKPRSPTLTLIIEESTGITRNQVYDAAESYLSTKVTPENERLKISKVPKEKKLTIRLEKGEKLTDMYNGFPLKWRFICAETEKNSANDMQNNNNSVSVRSEKKYFELSFDKKYKEVVLDSYLPFILDKAKEMKDEERVLKMHTLNTAYCYSGVKWDSINLEHPSTFETLAMEPEMKNLIIEDLNMFVKRREFYKKVGRAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIFDLQLGNIVRDSDLRKLLLATANRSILVIEDIDCSIDIPERRHGEGRKQQNDIQLTLSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHIHMSYCSYEGFKILASNYLDISHDNPFFGEIEGLIEDIQITPAQVAEELMKNEDAEATLEGFVKLLKRKKMEGDVCENNNNKIEQQSKKRKVVGCKQKRGGGNSKSNVVVTQRRTRGYKRGSSL*