Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1443620 | A0A396JZ33 | 76.901 | 342 | 27 | 4 | 1 | 290 | 346 | 687 | 1.34e-158 | 508 |
Msa1443620 | A0A396JZ33 | 81.818 | 341 | 11 | 4 | 1 | 290 | 940 | 1280 | 1.38e-166 | 530 |
Msa1443620 | A0A396JZ33 | 83.264 | 239 | 16 | 3 | 1 | 215 | 1535 | 1773 | 1.32e-116 | 393 |
Msa1443620 | A0A396JZ33 | 85.294 | 374 | 53 | 1 | 263 | 636 | 811 | 1182 | 0.0 | 628 |
Msa1443620 | A0A396JZ33 | 93.646 | 362 | 23 | 0 | 279 | 640 | 231 | 592 | 0.0 | 668 |
Msa1443620 | A0A396JZ33 | 94.231 | 364 | 21 | 0 | 279 | 642 | 1420 | 1783 | 0.0 | 675 |
Msa1443620 | A0A396JZ33 | 94.872 | 78 | 4 | 0 | 213 | 290 | 14 | 91 | 2.35e-35 | 155 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0001830 | Msa1443620 | 0.835560 | 1.562761e-56 | -8.615850e-47 |
Msa0004480 | Msa1443620 | 0.856369 | 3.371545e-62 | -8.615850e-47 |
Msa0005260 | Msa1443620 | 0.810114 | 1.353705e-50 | -8.615850e-47 |
Msa0006060 | Msa1443620 | 0.829867 | 4.047267e-55 | -8.615850e-47 |
Msa0009640 | Msa1443620 | 0.815607 | 8.477541e-52 | -8.615850e-47 |
Msa0011050 | Msa1443620 | 0.810581 | 1.073654e-50 | -8.615850e-47 |
Msa0026630 | Msa1443620 | 0.827542 | 1.477452e-54 | -8.615850e-47 |
Msa0052780 | Msa1443620 | 0.814021 | 1.904076e-51 | -8.615850e-47 |
Msa0059440 | Msa1443620 | 0.824396 | 8.257948e-54 | -8.615850e-47 |
Msa0059900 | Msa1443620 | 0.829100 | 6.217838e-55 | -8.615850e-47 |
Msa0061220 | Msa1443620 | 0.848129 | 7.462539e-60 | -8.615850e-47 |
Msa0071470 | Msa1443620 | 0.811221 | 7.804425e-51 | -8.615850e-47 |
Msa0077370 | Msa1443620 | 0.817897 | 2.598041e-52 | -8.615850e-47 |
Msa0090380 | Msa1443620 | 0.970686 | 5.373755e-132 | -8.615850e-47 |
Msa0094710 | Msa1443620 | 0.847983 | 8.184587e-60 | -8.615850e-47 |
Msa0097570 | Msa1443620 | 0.825637 | 4.206292e-54 | -8.615850e-47 |
Msa0104810 | Msa1443620 | 0.855854 | 4.770519e-62 | -8.615850e-47 |
Msa0113370 | Msa1443620 | -0.812514 | 4.080823e-51 | -8.615850e-47 |
Msa0119430 | Msa1443620 | 0.849855 | 2.473077e-60 | -8.615850e-47 |
Msa1355510 | Msa1443620 | 0.867093 | 1.764679e-65 | -8.615850e-47 |
Msa1362850 | Msa1443620 | 0.823522 | 1.323529e-53 | -8.615850e-47 |
Msa1364080 | Msa1443620 | 0.884819 | 1.384007e-71 | -8.615850e-47 |
Msa1369320 | Msa1443620 | 0.817703 | 2.874271e-52 | -8.615850e-47 |
Msa1370420 | Msa1443620 | 0.840454 | 8.611946e-58 | -8.615850e-47 |
Msa1386000 | Msa1443620 | 0.838166 | 3.380150e-57 | -8.615850e-47 |
Msa1395110 | Msa1443620 | 0.802811 | 4.698201e-49 | -8.615850e-47 |
Msa1397390 | Msa1443620 | 0.843915 | 1.044771e-58 | -8.615850e-47 |
Msa1398140 | Msa1443620 | 0.814392 | 1.577212e-51 | -8.615850e-47 |
Msa1398900 | Msa1443620 | 0.806353 | 8.572181e-50 | -8.615850e-47 |
Msa1402350 | Msa1443620 | 0.840895 | 6.600585e-58 | -8.615850e-47 |
Msa1403690 | Msa1443620 | 0.812305 | 4.533415e-51 | -8.615850e-47 |
Msa1413800 | Msa1443620 | 0.844248 | 8.501985e-59 | -8.615850e-47 |
Msa1420940 | Msa1443620 | 0.812499 | 4.111011e-51 | -8.615850e-47 |
Msa1423540 | Msa1443620 | 0.801617 | 8.273378e-49 | -8.615850e-47 |
Msa1433410 | Msa1443620 | 0.974450 | 3.540030e-138 | -8.615850e-47 |
Msa1435320 | Msa1443620 | 0.845977 | 2.900360e-59 | -8.615850e-47 |
Msa1436090 | Msa1443620 | 0.843954 | 1.019424e-58 | -8.615850e-47 |
Msa1443400 | Msa1443620 | 0.847568 | 1.065188e-59 | -8.615850e-47 |
Msa1443620 | Msa1443640 | 0.880582 | 4.875554e-70 | -8.615850e-47 |
Msa1443620 | Msa1448040 | 0.847652 | 1.010069e-59 | -8.615850e-47 |
Msa0611060 | Msa1443620 | 0.866200 | 3.391770e-65 | -8.615850e-47 |
Msa0613300 | Msa1443620 | 0.827902 | 1.210047e-54 | -8.615850e-47 |
Msa0615210 | Msa1443620 | 0.841469 | 4.662159e-58 | -8.615850e-47 |
Msa0628810 | Msa1443620 | 0.841559 | 4.415494e-58 | -8.615850e-47 |
Msa0631320 | Msa1443620 | 0.844743 | 6.256604e-59 | -8.615850e-47 |
Msa0635270 | Msa1443620 | 0.827633 | 1.404453e-54 | -8.615850e-47 |
Msa0641130 | Msa1443620 | 0.859258 | 4.684417e-63 | -8.615850e-47 |
Msa0649100 | Msa1443620 | 0.820866 | 5.468774e-53 | -8.615850e-47 |
Msa0650560 | Msa1443620 | 0.802761 | 4.813008e-49 | -8.615850e-47 |
Msa0654900 | Msa1443620 | 0.819220 | 1.302322e-52 | -8.615850e-47 |
Msa0669700 | Msa1443620 | 0.814355 | 1.607305e-51 | -8.615850e-47 |
Msa0671210 | Msa1443620 | 0.804301 | 2.307352e-49 | -8.615850e-47 |
Msa0679670 | Msa1443620 | 0.857555 | 1.507578e-62 | -8.615850e-47 |
Msa0693750 | Msa1443620 | 0.851355 | 9.365395e-61 | -8.615850e-47 |
Msa0696100 | Msa1443620 | 0.819728 | 9.970122e-53 | -8.615850e-47 |
Msa0697680 | Msa1443620 | 0.801639 | 8.189820e-49 | -8.615850e-47 |
Msa0698450 | Msa1443620 | 0.826117 | 3.234572e-54 | -8.615850e-47 |
Msa0698460 | Msa1443620 | 0.838511 | 2.753209e-57 | -8.615850e-47 |
Msa0713060 | Msa1443620 | 0.838841 | 2.262514e-57 | -8.615850e-47 |
Msa0720640 | Msa1443620 | 0.813205 | 2.880144e-51 | -8.615850e-47 |
Msa0729350 | Msa1443620 | 0.808182 | 3.512419e-50 | -8.615850e-47 |
Msa0734940 | Msa1443620 | 0.811667 | 6.242229e-51 | -8.615850e-47 |
Msa0737030 | Msa1443620 | 0.802242 | 6.156816e-49 | -8.615850e-47 |
Msa0744640 | Msa1443620 | 0.867041 | 1.832257e-65 | -8.615850e-47 |
Msa0769720 | Msa1443620 | 0.832141 | 1.119678e-55 | -8.615850e-47 |
Msa0772740 | Msa1443620 | 0.824935 | 6.165164e-54 | -8.615850e-47 |
Msa0775160 | Msa1443620 | 0.822216 | 2.667939e-53 | -8.615850e-47 |
Msa0787790 | Msa1443620 | 0.835585 | 1.540607e-56 | -8.615850e-47 |
Msa0790920 | Msa1443620 | 0.802539 | 5.347475e-49 | -8.615850e-47 |
Msa0798450 | Msa1443620 | 0.802792 | 4.742148e-49 | -8.615850e-47 |
Msa0804870 | Msa1443620 | 0.838065 | 3.588477e-57 | -8.615850e-47 |
Msa0807670 | Msa1443620 | 0.809051 | 2.290414e-50 | -8.615850e-47 |
Msa0807680 | Msa1443620 | 0.809460 | 1.871246e-50 | -8.615850e-47 |
Msa0812530 | Msa1443620 | 0.868083 | 8.497609e-66 | -8.615850e-47 |
Msa0816630 | Msa1443620 | 0.821861 | 3.223470e-53 | -8.615850e-47 |
Msa0841730 | Msa1443620 | 0.866568 | 2.592256e-65 | -8.615850e-47 |
Msa0136630 | Msa1443620 | 0.805896 | 1.069872e-49 | -8.615850e-47 |
Msa0137860 | Msa1443620 | 0.971214 | 8.195385e-133 | -8.615850e-47 |
Msa0138900 | Msa1443620 | 0.856825 | 2.476061e-62 | -8.615850e-47 |
Msa0150620 | Msa1443620 | 0.814280 | 1.669493e-51 | -8.615850e-47 |
Msa0151170 | Msa1443620 | 0.826521 | 2.591378e-54 | -8.615850e-47 |
Msa0151220 | Msa1443620 | 0.810105 | 1.360064e-50 | -8.615850e-47 |
Msa0152560 | Msa1443620 | 0.807931 | 3.971162e-50 | -8.615850e-47 |
Msa0170770 | Msa1443620 | 0.882472 | 1.012645e-70 | -8.615850e-47 |
Msa0171330 | Msa1443620 | 0.801028 | 1.092187e-48 | -8.615850e-47 |
Msa0176260 | Msa1443620 | 0.850896 | 1.262001e-60 | -8.615850e-47 |
Msa0187310 | Msa1443620 | 0.854934 | 8.838875e-62 | -8.615850e-47 |
Msa0193190 | Msa1443620 | 0.806209 | 9.192975e-50 | -8.615850e-47 |
Msa0196880 | Msa1443620 | 0.847549 | 1.077941e-59 | -8.615850e-47 |
Msa0213430 | Msa1443620 | 0.801904 | 7.226063e-49 | -8.615850e-47 |
Msa0223140 | Msa1443620 | 0.832973 | 6.964060e-56 | -8.615850e-47 |
Msa0224130 | Msa1443620 | 0.895168 | 1.238022e-75 | -8.615850e-47 |
Msa0225850 | Msa1443620 | 0.829564 | 4.795758e-55 | -8.615850e-47 |
Msa0230070 | Msa1443620 | 0.804257 | 2.356496e-49 | -8.615850e-47 |
Msa0233970 | Msa1443620 | 0.837641 | 4.610132e-57 | -8.615850e-47 |
Msa1225580 | Msa1443620 | 0.873625 | 1.271970e-67 | -8.615850e-47 |
Msa1229480 | Msa1443620 | 0.807210 | 5.649055e-50 | -8.615850e-47 |
Msa1231190 | Msa1443620 | 0.810506 | 1.114405e-50 | -8.615850e-47 |
Msa1231710 | Msa1443620 | 0.831442 | 1.665377e-55 | -8.615850e-47 |
Msa1236470 | Msa1443620 | 0.819173 | 1.334388e-52 | -8.615850e-47 |
Msa1237890 | Msa1443620 | 0.801048 | 1.082162e-48 | -8.615850e-47 |
Msa1246780 | Msa1443620 | 0.841402 | 4.855810e-58 | -8.615850e-47 |
Msa1246790 | Msa1443620 | 0.851876 | 6.670978e-61 | -8.615850e-47 |
Msa1252000 | Msa1443620 | 0.822757 | 1.996818e-53 | -8.615850e-47 |
Msa1252810 | Msa1443620 | 0.848359 | 6.446151e-60 | -8.615850e-47 |
Msa1256060 | Msa1443620 | 0.840718 | 7.343727e-58 | -8.615850e-47 |
Msa1256810 | Msa1443620 | 0.803870 | 2.836168e-49 | -8.615850e-47 |
Msa1259860 | Msa1443620 | 0.817792 | 2.743708e-52 | -8.615850e-47 |
Msa1260060 | Msa1443620 | 0.812633 | 3.843881e-51 | -8.615850e-47 |
Msa1262540 | Msa1443620 | 0.801457 | 8.923762e-49 | -8.615850e-47 |
Msa1265020 | Msa1443620 | 0.805096 | 1.573966e-49 | -8.615850e-47 |
Msa1270050 | Msa1443620 | 0.804499 | 2.097761e-49 | -8.615850e-47 |
Msa1274380 | Msa1443620 | 0.836598 | 8.518544e-57 | -8.615850e-47 |
Msa1277780 | Msa1443620 | 0.805856 | 1.090587e-49 | -8.615850e-47 |
Msa1284090 | Msa1443620 | 0.811168 | 8.011912e-51 | -8.615850e-47 |
Msa1286210 | Msa1443620 | 0.841116 | 5.775347e-58 | -8.615850e-47 |
Msa1286220 | Msa1443620 | 0.872151 | 3.963163e-67 | -8.615850e-47 |
Msa1296240 | Msa1443620 | 0.835995 | 1.212524e-56 | -8.615850e-47 |
Msa1309760 | Msa1443620 | 0.830119 | 3.513637e-55 | -8.615850e-47 |
Msa1312440 | Msa1443620 | 0.863219 | 2.909864e-64 | -8.615850e-47 |
Msa1316460 | Msa1443620 | 0.807264 | 5.502335e-50 | -8.615850e-47 |
Msa1334840 | Msa1443620 | 0.847651 | 1.010642e-59 | -8.615850e-47 |
Msa0364790 | Msa1443620 | 0.824488 | 7.855410e-54 | -8.615850e-47 |
Msa0365950 | Msa1443620 | 0.823709 | 1.196750e-53 | -8.615850e-47 |
Msa0366780 | Msa1443620 | 0.803210 | 3.886028e-49 | -8.615850e-47 |
Msa0376970 | Msa1443620 | 0.819822 | 9.492959e-53 | -8.615850e-47 |
Msa0380600 | Msa1443620 | 0.818139 | 2.290664e-52 | -8.615850e-47 |
Msa0388730 | Msa1443620 | 0.811330 | 7.388386e-51 | -8.615850e-47 |
Msa0393100 | Msa1443620 | 0.830714 | 2.513615e-55 | -8.615850e-47 |
Msa0402800 | Msa1443620 | 0.836480 | 9.131725e-57 | -8.615850e-47 |
Msa0413870 | Msa1443620 | 0.814622 | 1.402758e-51 | -8.615850e-47 |
Msa0414730 | Msa1443620 | 0.802754 | 4.828928e-49 | -8.615850e-47 |
Msa0425610 | Msa1443620 | 0.824933 | 6.170676e-54 | -8.615850e-47 |
Msa0428200 | Msa1443620 | 0.804685 | 1.918584e-49 | -8.615850e-47 |
Msa0430240 | Msa1443620 | 0.817872 | 2.631825e-52 | -8.615850e-47 |
Msa0440730 | Msa1443620 | 0.819839 | 9.408979e-53 | -8.615850e-47 |
Msa0443450 | Msa1443620 | 0.827051 | 1.936350e-54 | -8.615850e-47 |
Msa0456770 | Msa1443620 | 0.804160 | 2.468554e-49 | -8.615850e-47 |
Msa0460670 | Msa1443620 | -0.808095 | 3.665420e-50 | -8.615850e-47 |
Msa1011250 | Msa1443620 | 0.849255 | 3.635546e-60 | -8.615850e-47 |
Msa1015880 | Msa1443620 | 0.833171 | 6.215587e-56 | -8.615850e-47 |
Msa1016960 | Msa1443620 | 0.876209 | 1.675181e-68 | -8.615850e-47 |
Msa1030810 | Msa1443620 | 0.814027 | 1.898872e-51 | -8.615850e-47 |
Msa1034450 | Msa1443620 | 0.814390 | 1.578657e-51 | -8.615850e-47 |
Msa1044510 | Msa1443620 | 0.813034 | 3.138831e-51 | -8.615850e-47 |
Msa1058200 | Msa1443620 | 0.862377 | 5.293149e-64 | -8.615850e-47 |
Msa1059670 | Msa1443620 | 0.835137 | 1.998899e-56 | -8.615850e-47 |
Msa1062040 | Msa1443620 | 0.817567 | 3.084795e-52 | -8.615850e-47 |
Msa1069890 | Msa1443620 | 0.850734 | 1.401773e-60 | -8.615850e-47 |
Msa1070540 | Msa1443620 | 0.806442 | 8.211849e-50 | -8.615850e-47 |
Msa1074200 | Msa1443620 | 0.816418 | 5.588278e-52 | -8.615850e-47 |
Msa1077970 | Msa1443620 | 0.801417 | 9.093320e-49 | -8.615850e-47 |
Msa1086490 | Msa1443620 | -0.818806 | 1.617429e-52 | -8.615850e-47 |
Msa1089190 | Msa1443620 | 0.884218 | 2.313595e-71 | -8.615850e-47 |
Msa1101240 | Msa1443620 | 0.806374 | 8.485221e-50 | -8.615850e-47 |
Msa1104650 | Msa1443620 | 0.820337 | 7.236075e-53 | -8.615850e-47 |
Msa1106310 | Msa1443620 | 0.830510 | 2.820613e-55 | -8.615850e-47 |
Msa0241480 | Msa1443620 | 0.809322 | 2.004009e-50 | -8.615850e-47 |
Msa0254470 | Msa1443620 | 0.821847 | 3.247198e-53 | -8.615850e-47 |
Msa0260520 | Msa1443620 | 0.828072 | 1.101605e-54 | -8.615850e-47 |
Msa0264500 | Msa1443620 | 0.801325 | 9.495827e-49 | -8.615850e-47 |
Msa0264520 | Msa1443620 | 0.839868 | 1.224564e-57 | -8.615850e-47 |
Msa0264680 | Msa1443620 | 0.866765 | 2.244780e-65 | -8.615850e-47 |
Msa0265270 | Msa1443620 | 0.892930 | 1.007315e-74 | -8.615850e-47 |
Msa0265480 | Msa1443620 | 0.800860 | 1.182218e-48 | -8.615850e-47 |
Msa0272400 | Msa1443620 | 0.835477 | 1.640805e-56 | -8.615850e-47 |
Msa0276430 | Msa1443620 | 0.868633 | 5.649825e-66 | -8.615850e-47 |
Msa0279430 | Msa1443620 | 0.806063 | 9.866440e-50 | -8.615850e-47 |
Msa0279660 | Msa1443620 | 0.824536 | 7.656098e-54 | -8.615850e-47 |
Msa0280360 | Msa1443620 | 0.802613 | 5.163297e-49 | -8.615850e-47 |
Msa0302510 | Msa1443620 | 0.827604 | 1.427281e-54 | -8.615850e-47 |
Msa0302730 | Msa1443620 | 0.876368 | 1.476731e-68 | -8.615850e-47 |
Msa0306310 | Msa1443620 | 0.837039 | 6.574226e-57 | -8.615850e-47 |
Msa0312590 | Msa1443620 | 0.824488 | 7.855528e-54 | -8.615850e-47 |
Msa0316470 | Msa1443620 | 0.857449 | 1.619889e-62 | -8.615850e-47 |
Msa0319020 | Msa1443620 | 0.844559 | 7.014598e-59 | -8.615850e-47 |
Msa0332190 | Msa1443620 | 0.843019 | 1.812637e-58 | -8.615850e-47 |
Msa0332200 | Msa1443620 | 0.836998 | 6.735342e-57 | -8.615850e-47 |
Msa0332780 | Msa1443620 | 0.804696 | 1.908287e-49 | -8.615850e-47 |
Msa0339720 | Msa1443620 | 0.826923 | 2.077849e-54 | -8.615850e-47 |
Msa0345050 | Msa1443620 | 0.800177 | 1.629117e-48 | -8.615850e-47 |
Msa0345890 | Msa1443620 | 0.809270 | 2.055867e-50 | -8.615850e-47 |
Msa0345980 | Msa1443620 | 0.822467 | 2.332862e-53 | -8.615850e-47 |
Msa1107200 | Msa1443620 | 0.819793 | 9.639214e-53 | -8.615850e-47 |
Msa1109670 | Msa1443620 | 0.807116 | 5.914282e-50 | -8.615850e-47 |
Msa1109810 | Msa1443620 | 0.809018 | 2.327617e-50 | -8.615850e-47 |
Msa1113100 | Msa1443620 | 0.817709 | 2.864954e-52 | -8.615850e-47 |
Msa1114670 | Msa1443620 | 0.827432 | 1.569404e-54 | -8.615850e-47 |
Msa1117540 | Msa1443620 | 0.831360 | 1.745131e-55 | -8.615850e-47 |
Msa1119920 | Msa1443620 | 0.836860 | 7.306629e-57 | -8.615850e-47 |
Msa1131790 | Msa1443620 | 0.875315 | 3.393835e-68 | -8.615850e-47 |
Msa1133700 | Msa1443620 | 0.803649 | 3.151321e-49 | -8.615850e-47 |
Msa1136760 | Msa1443620 | 0.822590 | 2.184212e-53 | -8.615850e-47 |
Msa1147640 | Msa1443620 | 0.824302 | 8.687667e-54 | -8.615850e-47 |
Msa1150780 | Msa1443620 | 0.822434 | 2.374495e-53 | -8.615850e-47 |
Msa1157670 | Msa1443620 | 0.822852 | 1.897645e-53 | -8.615850e-47 |
Msa1159170 | Msa1443620 | 0.849736 | 2.670674e-60 | -8.615850e-47 |
Msa1173150 | Msa1443620 | 0.822750 | 2.003882e-53 | -8.615850e-47 |
Msa1180720 | Msa1443620 | 0.839332 | 1.688368e-57 | -8.615850e-47 |
Msa1181060 | Msa1443620 | 0.838609 | 2.597530e-57 | -8.615850e-47 |
Msa1183140 | Msa1443620 | 0.832107 | 1.141519e-55 | -8.615850e-47 |
Msa1187490 | Msa1443620 | 0.817474 | 3.236710e-52 | -8.615850e-47 |
Msa1188350 | Msa1443620 | 0.847405 | 1.180876e-59 | -8.615850e-47 |
Msa1199870 | Msa1443620 | 0.808257 | 3.385630e-50 | -8.615850e-47 |
Msa1206290 | Msa1443620 | 0.805431 | 1.339612e-49 | -8.615850e-47 |
Msa1208990 | Msa1443620 | 0.852120 | 5.684325e-61 | -8.615850e-47 |
Msa1218160 | Msa1443620 | 0.885530 | 7.507715e-72 | -8.615850e-47 |
Msa1221220 | Msa1443620 | 0.817205 | 3.720372e-52 | -8.615850e-47 |
Msa1221240 | Msa1443620 | 0.824818 | 6.568832e-54 | -8.615850e-47 |
Msa1221960 | Msa1443620 | 0.807280 | 5.459642e-50 | -8.615850e-47 |
Msa0484800 | Msa1443620 | 0.861224 | 1.192540e-63 | -8.615850e-47 |
Msa0488580 | Msa1443620 | 0.844418 | 7.652599e-59 | -8.615850e-47 |
Msa0497860 | Msa1443620 | 0.838978 | 2.085811e-57 | -8.615850e-47 |
Msa0500400 | Msa1443620 | 0.821928 | 3.110440e-53 | -8.615850e-47 |
Msa0519160 | Msa1443620 | 0.800243 | 1.578978e-48 | -8.615850e-47 |
Msa0521130 | Msa1443620 | 0.820194 | 7.803222e-53 | -8.615850e-47 |
Msa0529000 | Msa1443620 | 0.815294 | 9.953377e-52 | -8.615850e-47 |
Msa0534270 | Msa1443620 | 0.812945 | 3.284465e-51 | -8.615850e-47 |
Msa0534870 | Msa1443620 | 0.847585 | 1.053808e-59 | -8.615850e-47 |
Msa0536350 | Msa1443620 | 0.817703 | 2.874517e-52 | -8.615850e-47 |
Msa0536540 | Msa1443620 | 0.808799 | 2.592864e-50 | -8.615850e-47 |
Msa0545050 | Msa1443620 | 0.867159 | 1.679995e-65 | -8.615850e-47 |
Msa0561360 | Msa1443620 | 0.817038 | 4.057434e-52 | -8.615850e-47 |
Msa0567370 | Msa1443620 | 0.824460 | 7.974114e-54 | -8.615850e-47 |
Msa0573950 | Msa1443620 | 0.830093 | 3.565577e-55 | -8.615850e-47 |
Msa0574930 | Msa1443620 | 0.816668 | 4.910221e-52 | -8.615850e-47 |
Msa0576560 | Msa1443620 | 0.822766 | 1.987314e-53 | -8.615850e-47 |
Msa0579670 | Msa1443620 | 0.805117 | 1.558160e-49 | -8.615850e-47 |
Msa0584580 | Msa1443620 | 0.858296 | 9.081461e-63 | -8.615850e-47 |
Msa0584600 | Msa1443620 | 0.864735 | 9.816383e-65 | -8.615850e-47 |
Msa0588670 | Msa1443620 | 0.810757 | 9.835800e-51 | -8.615850e-47 |
Msa0588710 | Msa1443620 | 0.842363 | 2.707747e-58 | -8.615850e-47 |
Msa0590390 | Msa1443620 | 0.857189 | 1.933281e-62 | -8.615850e-47 |
Msa0592330 | Msa1443620 | 0.804104 | 2.535787e-49 | -8.615850e-47 |
Msa0592650 | Msa1443620 | 0.804971 | 1.672045e-49 | -8.615850e-47 |
Msa0592660 | Msa1443620 | 0.802111 | 6.550079e-49 | -8.615850e-47 |
Msa0600590 | Msa1443620 | 0.860762 | 1.646970e-63 | -8.615850e-47 |
Msa0852790 | Msa1443620 | 0.844230 | 8.599997e-59 | -8.615850e-47 |
Msa0856020 | Msa1443620 | 0.816256 | 6.072673e-52 | -8.615850e-47 |
Msa0862620 | Msa1443620 | 0.806946 | 6.425221e-50 | -8.615850e-47 |
Msa0863940 | Msa1443620 | 0.807343 | 5.293518e-50 | -8.615850e-47 |
Msa0863990 | Msa1443620 | 0.863051 | 3.281012e-64 | -8.615850e-47 |
Msa0864820 | Msa1443620 | -0.813580 | 2.381740e-51 | -8.615850e-47 |
Msa0870510 | Msa1443620 | 0.862445 | 5.043405e-64 | -8.615850e-47 |
Msa0873910 | Msa1443620 | 0.800621 | 1.322443e-48 | -8.615850e-47 |
Msa0874640 | Msa1443620 | 0.827939 | 1.185589e-54 | -8.615850e-47 |
Msa0905570 | Msa1443620 | 0.819735 | 9.936496e-53 | -8.615850e-47 |
Msa0930740 | Msa1443620 | 0.828475 | 8.808989e-55 | -8.615850e-47 |
Msa0945130 | Msa1443620 | 0.982557 | 2.121784e-155 | -8.615850e-47 |
Msa0974710 | Msa1443620 | 0.802676 | 5.010175e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1443620 | MtrunA17_Chr1g0210284 | 94.231 | 364 | 21 | 0 | 279 | 642 | 231 | 594 | 0.0 | 675 |
Msa1443620 | MtrunA17_Chr1g0210284 | 83.264 | 239 | 16 | 3 | 1 | 215 | 346 | 584 | 4.30e-129 | 392 |
Msa1443620 | MtrunA17_Chr1g0210284 | 98.718 | 78 | 1 | 0 | 213 | 290 | 14 | 91 | 1.21e-41 | 159 |
Msa1443620 | MtrunA17_Chr1g0210274 | 93.681 | 364 | 23 | 0 | 279 | 642 | 231 | 594 | 0.0 | 672 |
Msa1443620 | MtrunA17_Chr1g0210274 | 79.600 | 250 | 27 | 3 | 1 | 226 | 346 | 595 | 3.26e-128 | 390 |
Msa1443620 | MtrunA17_Chr1g0210274 | 94.872 | 78 | 4 | 0 | 213 | 290 | 14 | 91 | 4.36e-40 | 155 |
Msa1443620 | MtrunA17_Chr1g0210291 | 66.848 | 368 | 113 | 4 | 279 | 641 | 230 | 593 | 9.01e-164 | 482 |
Msa1443620 | MtrunA17_Chr1g0210291 | 64.542 | 251 | 57 | 4 | 1 | 219 | 344 | 594 | 2.72e-97 | 310 |
Msa1443620 | MtrunA17_Chr1g0210291 | 69.620 | 79 | 24 | 0 | 212 | 290 | 12 | 90 | 2.03e-29 | 123 |
Msa1443620 | MtrunA17_Chr7g0264861 | 60.256 | 312 | 117 | 2 | 329 | 635 | 295 | 604 | 1.02e-125 | 385 |
Msa1443620 | MtrunA17_Chr7g0264861 | 54.508 | 244 | 81 | 4 | 1 | 214 | 358 | 601 | 8.55e-79 | 262 |
Msa1443620 | MtrunA17_Chr7g0264861 | 71.053 | 76 | 22 | 0 | 215 | 290 | 19 | 94 | 4.43e-29 | 122 |
Msa1443620 | MtrunA17_Chr1g0171591 | 55.618 | 356 | 137 | 5 | 294 | 631 | 244 | 596 | 1.16e-123 | 379 |
Msa1443620 | MtrunA17_Chr1g0171591 | 56.148 | 244 | 77 | 5 | 1 | 214 | 353 | 596 | 1.50e-78 | 261 |
Msa1443620 | MtrunA17_Chr1g0171591 | 65.823 | 79 | 27 | 0 | 212 | 290 | 11 | 89 | 1.76e-29 | 123 |
Msa1443620 | MtrunA17_Chr1g0174101 | 52.909 | 361 | 159 | 3 | 278 | 634 | 228 | 581 | 7.96e-120 | 369 |
Msa1443620 | MtrunA17_Chr1g0174101 | 56.828 | 227 | 74 | 3 | 1 | 203 | 344 | 570 | 7.33e-75 | 251 |
Msa1443620 | MtrunA17_Chr1g0174101 | 62.025 | 79 | 30 | 0 | 212 | 290 | 11 | 89 | 3.07e-27 | 116 |
Msa1443620 | MtrunA17_Chr2g0330551 | 41.880 | 234 | 124 | 1 | 381 | 614 | 317 | 538 | 4.61e-56 | 199 |
Msa1443620 | MtrunA17_Chr2g0330551 | 38.647 | 207 | 115 | 3 | 3 | 197 | 332 | 538 | 3.04e-36 | 143 |
Msa1443620 | MtrunA17_Chr5g0442481 | 37.712 | 236 | 136 | 2 | 379 | 614 | 309 | 533 | 5.20e-53 | 190 |
Msa1443620 | MtrunA17_Chr5g0442481 | 35.096 | 208 | 122 | 3 | 3 | 197 | 326 | 533 | 1.57e-34 | 138 |
Msa1443620 | MtrunA17_Chr4g0037301 | 40.175 | 229 | 126 | 2 | 377 | 605 | 317 | 534 | 4.41e-47 | 174 |
Msa1443620 | MtrunA17_Chr4g0037301 | 36.139 | 202 | 110 | 5 | 3 | 188 | 336 | 534 | 1.19e-26 | 114 |
Msa1443620 | MtrunA17_Chr7g0225191 | 40.756 | 238 | 128 | 4 | 377 | 604 | 342 | 576 | 5.58e-47 | 174 |
Msa1443620 | MtrunA17_Chr7g0225191 | 36.559 | 186 | 96 | 6 | 3 | 177 | 361 | 535 | 2.47e-25 | 110 |
Msa1443620 | MtrunA17_Chr4g0064981 | 36.245 | 229 | 140 | 3 | 377 | 605 | 337 | 559 | 6.89e-40 | 154 |
Msa1443620 | MtrunA17_Chr4g0064981 | 29.902 | 204 | 125 | 4 | 3 | 188 | 356 | 559 | 4.88e-20 | 94.4 |
Msa1443620 | MtrunA17_Chr5g0405621 | 34.016 | 244 | 145 | 3 | 377 | 620 | 305 | 532 | 6.00e-38 | 148 |
Msa1443620 | MtrunA17_Chr5g0405621 | 30.093 | 216 | 129 | 5 | 3 | 203 | 324 | 532 | 4.95e-21 | 97.1 |
Msa1443620 | MtrunA17_Chr3g0132161 | 32.302 | 291 | 165 | 6 | 333 | 605 | 278 | 554 | 1.39e-36 | 144 |
Msa1443620 | MtrunA17_Chr3g0132161 | 28.070 | 228 | 115 | 8 | 3 | 188 | 334 | 554 | 9.04e-16 | 80.9 |
Msa1443620 | MtrunA17_Chr3g0132161 | 42.254 | 71 | 41 | 0 | 220 | 290 | 10 | 80 | 6.58e-11 | 65.5 |
Msa1443620 | MtrunA17_Chr2g0304561 | 36.364 | 231 | 137 | 3 | 377 | 605 | 331 | 553 | 1.58e-36 | 144 |
Msa1443620 | MtrunA17_Chr2g0304561 | 32.857 | 210 | 111 | 6 | 3 | 188 | 350 | 553 | 8.30e-20 | 93.6 |
Msa1443620 | MtrunA17_Chr2g0333371 | 31.441 | 229 | 114 | 5 | 377 | 605 | 104 | 289 | 4.74e-30 | 120 |
Msa1443620 | MtrunA17_Chr2g0333371 | 30.769 | 195 | 82 | 8 | 11 | 188 | 131 | 289 | 5.80e-16 | 79.3 |
Msa1443620 | MtrunA17_Chr5g0408921 | 28.099 | 242 | 160 | 8 | 380 | 617 | 338 | 569 | 1.38e-13 | 73.9 |
Msa1443620 | MtrunA17_Chr7g0251871 | 27.160 | 243 | 161 | 8 | 380 | 618 | 332 | 562 | 2.67e-11 | 66.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1443620 | AT2G39210.1 | 65.363 | 358 | 111 | 2 | 291 | 635 | 238 | 595 | 2.02e-159 | 471 |
Msa1443620 | AT2G39210.1 | 63.964 | 222 | 56 | 3 | 1 | 198 | 345 | 566 | 5.79e-88 | 286 |
Msa1443620 | AT2G39210.1 | 77.632 | 76 | 17 | 0 | 215 | 290 | 11 | 86 | 5.64e-32 | 131 |
Msa1443620 | AT2G28120.1 | 57.012 | 328 | 138 | 2 | 291 | 617 | 234 | 559 | 3.12e-125 | 382 |
Msa1443620 | AT2G28120.1 | 59.375 | 224 | 67 | 3 | 1 | 200 | 336 | 559 | 8.07e-77 | 256 |
Msa1443620 | AT2G28120.1 | 70.833 | 72 | 21 | 0 | 219 | 290 | 11 | 82 | 7.26e-27 | 115 |
Msa1443620 | AT2G34355.2 | 37.037 | 270 | 145 | 3 | 352 | 611 | 116 | 370 | 2.78e-57 | 198 |
Msa1443620 | AT2G34355.2 | 38.725 | 204 | 113 | 3 | 3 | 194 | 167 | 370 | 2.14e-39 | 149 |
Msa1443620 | AT1G74780.1 | 42.128 | 235 | 124 | 1 | 381 | 615 | 311 | 533 | 2.85e-56 | 199 |
Msa1443620 | AT1G74780.1 | 37.500 | 208 | 118 | 3 | 3 | 198 | 326 | 533 | 5.20e-37 | 145 |
Msa1443620 | AT1G74780.1 | 46.154 | 65 | 35 | 0 | 219 | 283 | 1 | 65 | 3.72e-11 | 66.6 |
Msa1443620 | AT2G34355.1 | 37.037 | 270 | 145 | 3 | 352 | 611 | 266 | 520 | 1.23e-55 | 197 |
Msa1443620 | AT2G34355.1 | 38.725 | 204 | 113 | 3 | 3 | 194 | 317 | 520 | 3.40e-38 | 149 |
Msa1443620 | AT2G34350.1 | 36.667 | 270 | 144 | 3 | 342 | 611 | 280 | 522 | 7.19e-53 | 190 |
Msa1443620 | AT2G34350.1 | 36.765 | 204 | 117 | 3 | 3 | 194 | 319 | 522 | 2.66e-35 | 140 |
Msa1443620 | AT2G34350.2 | 36.667 | 270 | 144 | 3 | 342 | 611 | 280 | 522 | 7.19e-53 | 190 |
Msa1443620 | AT2G34350.2 | 36.765 | 204 | 117 | 3 | 3 | 194 | 319 | 522 | 2.66e-35 | 140 |
Msa1443620 | AT1G18940.1 | 40.271 | 221 | 120 | 1 | 385 | 605 | 308 | 516 | 9.99e-52 | 187 |
Msa1443620 | AT1G18940.1 | 35.859 | 198 | 115 | 3 | 3 | 188 | 319 | 516 | 2.09e-33 | 135 |
Msa1443620 | AT1G18940.1 | 47.761 | 67 | 35 | 0 | 217 | 283 | 1 | 67 | 3.87e-12 | 69.7 |
Msa1443620 | AT2G16660.1 | 39.035 | 228 | 128 | 2 | 377 | 604 | 313 | 529 | 2.23e-47 | 175 |
Msa1443620 | AT2G16660.1 | 34.000 | 200 | 115 | 4 | 3 | 187 | 332 | 529 | 1.15e-25 | 112 |
Msa1443620 | AT4G34950.1 | 35.907 | 259 | 145 | 3 | 346 | 604 | 313 | 550 | 2.99e-47 | 175 |
Msa1443620 | AT4G34950.1 | 34.000 | 200 | 115 | 4 | 3 | 187 | 353 | 550 | 5.25e-26 | 113 |
Msa1443620 | AT3G01930.1 | 38.235 | 238 | 142 | 3 | 377 | 614 | 239 | 471 | 2.21e-44 | 165 |
Msa1443620 | AT3G01930.1 | 30.244 | 205 | 114 | 6 | 17 | 197 | 272 | 471 | 5.59e-21 | 97.1 |
Msa1443620 | AT3G01930.2 | 38.235 | 238 | 142 | 3 | 377 | 614 | 352 | 584 | 9.41e-44 | 166 |
Msa1443620 | AT3G01930.2 | 30.244 | 205 | 114 | 6 | 17 | 197 | 385 | 584 | 7.57e-21 | 97.4 |
Msa1443620 | AT5G14120.1 | 37.975 | 237 | 142 | 3 | 377 | 613 | 347 | 578 | 3.39e-43 | 164 |
Msa1443620 | AT5G14120.1 | 29.703 | 202 | 117 | 5 | 17 | 196 | 380 | 578 | 1.50e-20 | 96.3 |
Msa1443620 | AT5G50630.1 | 33.882 | 304 | 174 | 5 | 304 | 604 | 251 | 530 | 4.03e-43 | 163 |
Msa1443620 | AT5G50630.1 | 32.057 | 209 | 112 | 6 | 3 | 187 | 328 | 530 | 1.70e-20 | 95.9 |
Msa1443620 | AT5G50520.1 | 33.882 | 304 | 174 | 5 | 304 | 604 | 251 | 530 | 4.03e-43 | 163 |
Msa1443620 | AT5G50520.1 | 32.057 | 209 | 112 | 6 | 3 | 187 | 328 | 530 | 1.70e-20 | 95.9 |
Msa1443620 | AT1G80530.1 | 34.498 | 229 | 136 | 4 | 377 | 605 | 330 | 544 | 1.12e-34 | 139 |
Msa1443620 | AT1G80530.1 | 31.795 | 195 | 109 | 6 | 11 | 188 | 357 | 544 | 9.49e-19 | 90.5 |
Msa1443620 | AT2G16660.2 | 46.835 | 79 | 40 | 1 | 377 | 455 | 313 | 389 | 9.56e-17 | 83.2 |
Msa1443620 | AT3G01630.2 | 26.407 | 231 | 158 | 5 | 380 | 605 | 339 | 562 | 1.49e-11 | 67.8 |
Msa1443620 | AT3G01630.1 | 26.407 | 231 | 158 | 5 | 380 | 605 | 321 | 544 | 1.69e-11 | 67.8 |
Msa1443620 | AT3G01930.3 | 47.368 | 76 | 38 | 1 | 377 | 452 | 352 | 425 | 2.95e-11 | 66.6 |
Find 109 sgRNAs with CRISPR-Local
Find 291 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TATGCAACTTTGTATAATTT+TGG | 0.150653 | tig0030488:-22395 | Msa1443620:CDS |
TGCTGTTGTTTCACTTATTT+TGG | 0.181515 | tig0030488:-22183 | Msa1443620:CDS |
TGCTGTTGTTAACCTTATTT+TGG | 0.216909 | tig0030488:-25730 | Msa1443620:CDS |
ATTGCAGCTGCAACTTTCTT+TGG | 0.248818 | tig0030488:-25753 | Msa1443620:intron |
TACGTAGCTTCAGTAATAAT+TGG | 0.273011 | tig0030488:-22485 | Msa1443620:CDS |
TTGTCCTAGCCACCAAAATA+AGG | 0.303085 | tig0030488:+25718 | None:intergenic |
GTGGCATGTATTTGTGGTAT+TGG | 0.316784 | tig0030488:-26302 | Msa1443620:CDS |
GTGACATATACAAGAGATAT+AGG | 0.328395 | tig0030488:-25680 | Msa1443620:CDS |
TATGCAGCTTCAGTGATTAT+CGG | 0.345986 | tig0030488:-26032 | Msa1443620:CDS |
ACCACCGTCCGGTGATGAAT+TGG | 0.352452 | tig0030488:+23746 | None:intergenic |
GTAAGCATTTGGAATTATCT+AGG | 0.357538 | tig0030488:-22644 | Msa1443620:CDS |
CTTGGAAAGCATAGAATAGA+AGG | 0.363836 | tig0030488:-25828 | Msa1443620:CDS |
AGTTTCACACAGGGTGAGTT+TGG | 0.364101 | tig0030488:-23070 | Msa1443620:CDS |
TTGACAGCAATTGATAATCT+TGG | 0.365572 | tig0030488:-22725 | Msa1443620:CDS |
CTTGGAAAGCATAGAATAGA+AGG | 0.368622 | tig0030488:-22281 | Msa1443620:CDS |
CTATTTGTGGCATGTATTTG+TGG | 0.387438 | tig0030488:-22761 | Msa1443620:CDS |
TTGACAGCAGTTGATAATCT+TGG | 0.396343 | tig0030488:-26272 | Msa1443620:CDS |
TTGTGTCTTTAGTAAGCATT+TGG | 0.401481 | tig0030488:-22655 | Msa1443620:CDS |
GTGGCATGTATTTGTGGTGT+TGG | 0.412454 | tig0030488:-22755 | Msa1443620:CDS |
AGATATGTTGATACTATTTG+TGG | 0.416529 | tig0030488:-22774 | Msa1443620:CDS |
ATATAGGGAAGAAGCTGAAA+TGG | 0.422458 | tig0030488:-25664 | Msa1443620:CDS |
CTCCGGCGGCTGCCATGATT+AGG | 0.422545 | tig0030488:+23704 | None:intergenic |
CTATTTGTGGCATGTATTTG+TGG | 0.422626 | tig0030488:-26308 | Msa1443620:CDS |
AGAGTTAAAGTAAGCATAAG+AGG | 0.426460 | tig0030488:+22563 | None:intergenic |
ATTGATAATCTTGGTCAGAT+AGG | 0.426987 | tig0030488:-22716 | Msa1443620:CDS |
AGACATGTTGATACTATTTG+TGG | 0.431839 | tig0030488:-26321 | None:intergenic |
CAAAGAAGCTAAGAAACAAT+TGG | 0.433049 | tig0030488:-22309 | Msa1443620:CDS |
CAAAGAAGCTAAGAAACAAT+TGG | 0.433049 | tig0030488:-25856 | Msa1443620:CDS |
TCATTGAAGAGAACAAGATT+TGG | 0.435135 | tig0030488:-22994 | Msa1443620:CDS |
GGAAGTATAACAAGTCCAAT+TGG | 0.435702 | tig0030488:-25921 | Msa1443620:intron |
GTACAGAGAAGAAGCTGAAA+TGG | 0.437234 | tig0030488:-22117 | Msa1443620:CDS |
AACACATCTTCCCACCACTT+TGG | 0.442991 | tig0030488:+22851 | None:intergenic |
AACTCTCTTTGTCTCATGTG+TGG | 0.452502 | tig0030488:-22546 | Msa1443620:CDS |
AGCAACGTTGGTGTCCTTGC+AGG | 0.461948 | tig0030488:-23583 | Msa1443620:CDS |
ACTCTCTTTGTCTCATGTGT+GGG | 0.462025 | tig0030488:-22545 | Msa1443620:CDS |
TTAAGCACATATAAGCCAAT+TGG | 0.462132 | tig0030488:+25906 | None:intergenic |
GTTGATAATCTTGGTCAGAT+AGG | 0.465696 | tig0030488:-26263 | Msa1443620:CDS |
AGAGTCAAAGAAAGCATAAG+AGG | 0.471726 | tig0030488:+26110 | None:intergenic |
GAAGCTGCATAGAGACCCTT+TGG | 0.475496 | tig0030488:+26044 | None:intergenic |
TTTCGCCTCCTTCCTAATCA+TGG | 0.475895 | tig0030488:-23716 | Msa1443620:CDS |
ACCGAACATGTAGGTGGCTC+CGG | 0.476564 | tig0030488:+23687 | None:intergenic |
TGACATATACAAGAGATATA+GGG | 0.477639 | tig0030488:-25679 | Msa1443620:CDS |
TAAGGAGGTTTAGTGTACTT+TGG | 0.479046 | tig0030488:+23626 | None:intergenic |
GACTCTCTTTGTCTCGTGTG+TGG | 0.483546 | tig0030488:-26093 | Msa1443620:CDS |
ACTCTCTTTGTCTCGTGTGT+GGG | 0.489234 | tig0030488:-26092 | Msa1443620:CDS |
GCCGGAGCCACCTACATGTT+CGG | 0.490142 | tig0030488:-23688 | Msa1443620:CDS |
CCTTCTGTTACTATTTGCAC+TGG | 0.490393 | tig0030488:+22938 | None:intergenic |
AAAATGTTCTGAAACAAATC+CGG | 0.495163 | tig0030488:+26157 | None:intergenic |
GGAAGTGTAGCAAGTCCACT+TGG | 0.498928 | tig0030488:-22374 | Msa1443620:CDS |
GCATGTATTTGTGGTGTTGG+TGG | 0.506795 | tig0030488:-22752 | Msa1443620:CDS |
TTCCTAATCATGGCAGCCGC+CGG | 0.509362 | tig0030488:-23706 | Msa1443620:CDS |
GATAGCATTTGGTGTGCCAA+AGG | 0.517982 | tig0030488:-26060 | Msa1443620:CDS |
CAACGAACTCTATCCACCTT+GGG | 0.520279 | tig0030488:-23554 | Msa1443620:intron |
TATTGTATAATCATCACCTC+TGG | 0.521894 | tig0030488:+22817 | None:intergenic |
GCATGTATTTGTGGTATTGG+TGG | 0.523323 | tig0030488:-26299 | Msa1443620:CDS |
GCACACCAAATGCTATCAAA+AGG | 0.525284 | tig0030488:+26066 | None:intergenic |
ATAGCATTTGGTGTGCCAAA+GGG | 0.533343 | tig0030488:-26059 | Msa1443620:CDS |
GTTACTATTTGCACTGGTGA+AGG | 0.536206 | tig0030488:+22944 | None:intergenic |
AAGAAACAATTGGAAGCACT+TGG | 0.542138 | tig0030488:-22299 | Msa1443620:CDS |
AAGAAACAATTGGAAGCACT+TGG | 0.542138 | tig0030488:-25846 | Msa1443620:CDS |
TAGGGAAGAAGCTGAAATGG+TGG | 0.542633 | tig0030488:-25661 | Msa1443620:CDS |
ACAGAGGAAGATGACAAAGT+TGG | 0.548475 | tig0030488:-22071 | Msa1443620:CDS |
GTATAATCATCACCTCTGGC+TGG | 0.551037 | tig0030488:+22821 | None:intergenic |
AAAGCATAGAATAGAAGGGC+AGG | 0.553260 | tig0030488:-25823 | Msa1443620:CDS |
GAAGCTACGTAGAGACCCTC+TGG | 0.564193 | tig0030488:+22497 | None:intergenic |
TGCAGCGGTAATAATAATGA+AGG | 0.565571 | tig0030488:+22217 | None:intergenic |
TAATCATCACCTCTGGCTGG+TGG | 0.569807 | tig0030488:+22824 | None:intergenic |
GGCGGCTGCCATGATTAGGA+AGG | 0.570452 | tig0030488:+23708 | None:intergenic |
GTTTGGTTTAAGTGCTGCTG+TGG | 0.571063 | tig0030488:-23053 | Msa1443620:CDS |
GTGCTTAATGTGAAGATCAC+TGG | 0.572972 | tig0030488:-22344 | Msa1443620:CDS |
GTGCTTAATGTGAAGATCAC+TGG | 0.572972 | tig0030488:-25891 | Msa1443620:CDS |
GGGCAGGAATTGAATTGTGT+TGG | 0.581328 | tig0030488:-25807 | Msa1443620:intron |
TCAATGAAAACAACGGCAAG+TGG | 0.581784 | tig0030488:+23010 | None:intergenic |
GAAAATGACGAACCACCGTC+CGG | 0.588466 | tig0030488:+23735 | None:intergenic |
TCAACGAACTCTATCCACCT+TGG | 0.589582 | tig0030488:-23555 | Msa1443620:CDS |
AAAGTAAGCATAAGAGGACG+AGG | 0.591288 | tig0030488:+22569 | None:intergenic |
AAAGAAAGCATAAGAGGACG+AGG | 0.591288 | tig0030488:+26116 | None:intergenic |
GGGCGTGAATTGAATTGTGT+TGG | 0.593657 | tig0030488:-22260 | Msa1443620:CDS |
GGAAGAAGCTGAAATGGTGG+AGG | 0.594474 | tig0030488:-25658 | Msa1443620:CDS |
CTCACTGTCCAATTCATCAC+CGG | 0.597382 | tig0030488:-23754 | Msa1443620:CDS |
GGCTGCCATGATTAGGAAGG+AGG | 0.603051 | tig0030488:+23711 | None:intergenic |
GAAGAATAGTAGTTTCACAC+AGG | 0.608304 | tig0030488:-23080 | Msa1443620:CDS |
CAGAGAAGAAGCTGAAATGG+TGG | 0.612740 | tig0030488:-22114 | Msa1443620:CDS |
GTTCTCTTCAATGAAAACAA+CGG | 0.618801 | tig0030488:+23003 | None:intergenic |
GCACATCAAATGCTATCAGA+AGG | 0.619230 | tig0030488:+22519 | None:intergenic |
GAAGTGTAGCAAGTCCACTT+GGG | 0.630096 | tig0030488:-22373 | Msa1443620:CDS |
AGAAGAAGCTGAAATGGTGG+AGG | 0.632991 | tig0030488:-22111 | Msa1443620:CDS |
GATAGCATTTGATGTGCCAG+AGG | 0.635342 | tig0030488:-22513 | Msa1443620:CDS |
ATGGTGGAGGTAAAGAACGA+GGG | 0.640025 | tig0030488:-25645 | Msa1443620:CDS |
TACATGTTCGGTCTATACTC+CGG | 0.641076 | tig0030488:-23676 | Msa1443620:CDS |
CCAGTGCAAATAGTAACAGA+AGG | 0.641583 | tig0030488:-22938 | Msa1443620:CDS |
ATAGCATTTGATGTGCCAGA+GGG | 0.644810 | tig0030488:-22512 | Msa1443620:CDS |
GGAGTATAGACCGAACATGT+AGG | 0.649476 | tig0030488:+23678 | None:intergenic |
GAACATGTAGGTGGCTCCGG+CGG | 0.649974 | tig0030488:+23690 | None:intergenic |
TTGGAAAGCATAGAATAGAA+GGG | 0.652646 | tig0030488:-25827 | Msa1443620:CDS |
TTGGAAAGCATAGAATAGAA+GGG | 0.653057 | tig0030488:-22280 | Msa1443620:CDS |
TTAAGCACATATAACCCAAG+TGG | 0.655955 | tig0030488:+22359 | None:intergenic |
CTGTCCAATTCATCACCGGA+CGG | 0.661899 | tig0030488:-23750 | Msa1443620:CDS |
ACAAAGGTGACATATACAAG+AGG | 0.662424 | tig0030488:-22139 | Msa1443620:CDS |
GTTCGTTGACTAGTCCTGCA+AGG | 0.663578 | tig0030488:+23569 | None:intergenic |
ATTGTTAAAACTACCCAAGG+TGG | 0.665582 | tig0030488:+23541 | None:intergenic |
AGTTGGTCAACAGCAGCATG+TGG | 0.667095 | tig0030488:-22054 | Msa1443620:CDS |
GTGTTCAATCCACCAGCCAG+AGG | 0.678931 | tig0030488:-22833 | Msa1443620:CDS |
AAAGAACGTGGAAAAGACAG+AGG | 0.686229 | tig0030488:-22087 | Msa1443620:CDS |
TCCAATTCATCACCGGACGG+TGG | 0.689064 | tig0030488:-23747 | Msa1443620:CDS |
GTATAGACCGAACATGTAGG+TGG | 0.689369 | tig0030488:+23681 | None:intergenic |
AAGAATAGTAGTTTCACACA+GGG | 0.699884 | tig0030488:-23079 | Msa1443620:CDS |
AATGGTGGAGGTAAAGAACG+AGG | 0.714318 | tig0030488:-25646 | Msa1443620:CDS |
AATGGTGGAGGTAAAGAACG+TGG | 0.730173 | tig0030488:-22099 | Msa1443620:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTTATTTATCAAATTTTGT+TGG | - | tig0030488:24200-24219 | Msa1443620:intron | 10.0% |
!!! | AGTAAAATTTGTTTTATTTT+GGG | + | tig0030488:24383-24402 | None:intergenic | 10.0% |
!!! | TAGTAAAATTTGTTTTATTT+TGG | + | tig0030488:24384-24403 | None:intergenic | 10.0% |
!!! | ATTTTACTAATTAATATTGA+TGG | - | tig0030488:24395-24414 | Msa1443620:intron | 10.0% |
!!! | ATAATATTTTTGTATATTGT+TGG | + | tig0030488:24537-24556 | None:intergenic | 10.0% |
!! | AACAATATACAAAAATATTA+TGG | - | tig0030488:24536-24555 | Msa1443620:intron | 10.0% |
!! | TTCATATTTATACTTAATTG+TGG | + | tig0030488:22844-22863 | None:intergenic | 15.0% |
!!! | TCATATTTACACTTTTTTAA+GGG | + | tig0030488:22872-22891 | None:intergenic | 15.0% |
!!! | TTCATATTTACACTTTTTTA+AGG | + | tig0030488:22873-22892 | None:intergenic | 15.0% |
!!! | TTTTCTATATCTATCTAAAA+AGG | - | tig0030488:22915-22934 | Msa1443620:CDS | 15.0% |
!! | TTTCTATATCTATCTAAAAA+GGG | - | tig0030488:22916-22935 | Msa1443620:CDS | 15.0% |
!! | AAACAAAATAGTTTAAATGA+AGG | + | tig0030488:22983-23002 | None:intergenic | 15.0% |
!!! | GATTTAAATTTTTATTGTAG+TGG | + | tig0030488:23063-23082 | None:intergenic | 15.0% |
!! | TATGATTCTAATATCTTAAA+AGG | + | tig0030488:23437-23456 | None:intergenic | 15.0% |
!! | ATGAAAATGAATAGAATAAA+TGG | + | tig0030488:23575-23594 | None:intergenic | 15.0% |
!! | TTAATATATCATAAAGATCA+TGG | - | tig0030488:23617-23636 | Msa1443620:CDS | 15.0% |
!! | AATATACAAAAATATTATGG+CGG | - | tig0030488:24539-24558 | Msa1443620:intron | 15.0% |
!!! | GTAAGTATTTGGAATTATTT+AGG | - | tig0030488:22169-22188 | Msa1443620:CDS | 20.0% |
!!! | TATGCAACTTTGTATAATTT+TGG | - | tig0030488:22418-22437 | Msa1443620:CDS | 20.0% |
!! | GGATAAAATTGAAAATGAAA+AGG | + | tig0030488:22962-22981 | None:intergenic | 20.0% |
!! | TCCACGATAAATAATATTAT+GGG | - | tig0030488:23665-23684 | Msa1443620:CDS | 20.0% |
!! | GTGTGTATGTATATATATAA+AGG | - | tig0030488:24277-24296 | Msa1443620:intron | 20.0% |
!!! | CAAAATCTTTGAAAAAACTA+AGG | + | tig0030488:24755-24774 | None:intergenic | 20.0% |
!!! | CTTAGTTTTTTCAAAGATTT+TGG | - | tig0030488:24753-24772 | Msa1443620:intron | 20.0% |
!!! | TTTTTGGTTACTTTATGATT+TGG | - | tig0030488:24859-24878 | Msa1443620:intron | 20.0% |
!!! | TTACTTTATGATTTGGTTAT+CGG | - | tig0030488:24866-24885 | Msa1443620:intron | 20.0% |
!! | TATTTATTATGATGACACAA+AGG | - | tig0030488:25088-25107 | Msa1443620:intron | 20.0% |
!!! | GTAATAATTGGATTTTGTTT+TGG | - | tig0030488:25887-25906 | Msa1443620:CDS | 20.0% |
!!! | TATGCAACTTTGTATAATTT+TGG | - | tig0030488:22418-22437 | Msa1443620:CDS | 20.0% |
! | TTGTGTCTTTAGTAAGTATT+TGG | - | tig0030488:22158-22177 | Msa1443620:CDS | 25.0% |
!!! | AAAATGTTCTGAAACAAATC+CGG | + | tig0030488:22206-22225 | None:intergenic | 25.0% |
! | GATATAATGGCAAAAAGTAA+TGG | + | tig0030488:22376-22395 | None:intergenic | 25.0% |
!! | TCCAAAAAGTTCTGATATAA+TGG | + | tig0030488:22389-22408 | None:intergenic | 25.0% |
! | TGACATATACAAGAGATATA+GGG | - | tig0030488:22681-22700 | Msa1443620:CDS | 25.0% |
! | CTACGAAATCTCATTAAAAT+AGG | - | tig0030488:23030-23049 | Msa1443620:CDS | 25.0% |
! | CAAAAATAAGTCAATATTCC+CGG | - | tig0030488:23274-23293 | Msa1443620:intron | 25.0% |
!! | TAATGCCTTAAAATTTTGGA+TGG | + | tig0030488:23327-23346 | None:intergenic | 25.0% |
!!! | ATCCAAAATTTTAAGGCATT+AGG | - | tig0030488:23326-23345 | Msa1443620:intron | 25.0% |
!! | TACCTAATGCCTTAAAATTT+TGG | + | tig0030488:23331-23350 | None:intergenic | 25.0% |
! | GAGGATGATAATATCTTAAA+AGG | + | tig0030488:23527-23546 | None:intergenic | 25.0% |
! | CTCCACGATAAATAATATTA+TGG | - | tig0030488:23664-23683 | Msa1443620:CDS | 25.0% |
! | CCACGATAAATAATATTATG+GGG | - | tig0030488:23666-23685 | Msa1443620:CDS | 25.0% |
! | GAGAATAAAAACATGAACTT+TGG | + | tig0030488:23784-23803 | None:intergenic | 25.0% |
!!! | ACTTACCACCATATTTTTTT+GGG | + | tig0030488:23827-23846 | None:intergenic | 25.0% |
!! | AATCTTTGAAAAAACTAAGG+AGG | + | tig0030488:24752-24771 | None:intergenic | 25.0% |
!!! | TTTTGGTCTTGCTATTTTTT+TGG | + | tig0030488:24895-24914 | None:intergenic | 25.0% |
! | ATGTGTCTTTACATTTGTAT+AGG | - | tig0030488:24924-24943 | Msa1443620:intron | 25.0% |
!!! | AAGGCTTTGATTTTGTTTAT+TGG | - | tig0030488:25107-25126 | Msa1443620:intron | 25.0% |
!!! | CTTTGATTTTGTTTATTGGT+TGG | - | tig0030488:25111-25130 | Msa1443620:intron | 25.0% |
! | AATTTCTTGTATGTTTCACT+TGG | - | tig0030488:25221-25240 | Msa1443620:intron | 25.0% |
! | AGATATGTTGATACTATTTG+TGG | - | tig0030488:25586-25605 | Msa1443620:intron | 25.0% |
! | GATATAATGGCAAAAAGTAA+TGG | + | tig0030488:22376-22395 | None:intergenic | 25.0% |
!! | CCATTATATCAGAACTTTTT+GGG | - | tig0030488:22386-22405 | Msa1443620:CDS | 25.0% |
!! | AAAGTGCTTATGCTTTTCTT+TGG | + | tig0030488:22139-22158 | None:intergenic | 30.0% |
!! | GTGATTATCGGATTTTGTTT+TGG | - | tig0030488:22340-22359 | Msa1443620:CDS | 30.0% |
! | GCCATTATATCAGAACTTTT+TGG | - | tig0030488:22385-22404 | Msa1443620:CDS | 30.0% |
TTAAGCACATATAAGCCAAT+TGG | + | tig0030488:22457-22476 | None:intergenic | 30.0% | |
CAAAGAAGCTAAGAAACAAT+TGG | - | tig0030488:22504-22523 | Msa1443620:CDS | 30.0% | |
! | TTGGAAAGCATAGAATAGAA+GGG | - | tig0030488:22533-22552 | Msa1443620:CDS | 30.0% |
!! | TGCTGTTGTTAACCTTATTT+TGG | - | tig0030488:22630-22649 | Msa1443620:CDS | 30.0% |
!!! | TGTTGTTAACCTTATTTTGG+TGG | - | tig0030488:22633-22652 | Msa1443620:CDS | 30.0% |
! | AGGACAAGAAAGTTTTACAA+AGG | - | tig0030488:22658-22677 | Msa1443620:CDS | 30.0% |
GTGACATATACAAGAGATAT+AGG | - | tig0030488:22680-22699 | Msa1443620:CDS | 30.0% | |
! | TAAAATTTTGGATGGAGATG+TGG | + | tig0030488:23319-23338 | None:intergenic | 30.0% |
! | CATCTCCATCCAAAATTTTA+AGG | - | tig0030488:23319-23338 | Msa1443620:intron | 30.0% |
GCTATAAATGTGCAAAATGT+TGG | + | tig0030488:23377-23396 | None:intergenic | 30.0% | |
TAGAATCATAATATCCACCA+TGG | - | tig0030488:23447-23466 | Msa1443620:intron | 30.0% | |
AATATCATGTTGAGAATCCA+TGG | + | tig0030488:23467-23486 | None:intergenic | 30.0% | |
TAGAATCATAATATCCACCA+TGG | - | tig0030488:23447-23466 | Msa1443620:intron | 30.0% | |
ACAACAAAGATAGAATGAAG+AGG | + | tig0030488:23546-23565 | None:intergenic | 30.0% | |
CCCCATAATATTATTTATCG+TGG | + | tig0030488:23669-23688 | None:intergenic | 30.0% | |
TAGTAAACCTTTCACTAGAA+AGG | + | tig0030488:23710-23729 | None:intergenic | 30.0% | |
! | TGACTATTTCTTTGTTTCAC+AGG | - | tig0030488:23751-23770 | Msa1443620:CDS | 30.0% |
TTCATGCTCCCAAAAAAATA+TGG | - | tig0030488:23816-23835 | Msa1443620:intron | 30.0% | |
!!! | GACTTACCACCATATTTTTT+TGG | + | tig0030488:23828-23847 | None:intergenic | 30.0% |
! | GTGGTAAGTCTCTTTAATTT+AGG | - | tig0030488:23838-23857 | Msa1443620:intron | 30.0% |
! | TCTCTTTAATTTAGGTGTCA+AGG | - | tig0030488:23846-23865 | Msa1443620:intron | 30.0% |
CTAATTTCTACTGTAAAGTG+AGG | + | tig0030488:23961-23980 | None:intergenic | 30.0% | |
! | CTTTTTGCAACCTTTTGTAA+AGG | - | tig0030488:24093-24112 | Msa1443620:intron | 30.0% |
TTTAGTCAACAAGATTGTCA+TGG | + | tig0030488:24245-24264 | None:intergenic | 30.0% | |
CAATTAAATAGAGAGAGAGA+GGG | + | tig0030488:24439-24458 | None:intergenic | 30.0% | |
TCAATTAAATAGAGAGAGAG+AGG | + | tig0030488:24440-24459 | None:intergenic | 30.0% | |
TACAAAAATATTATGGCGGT+TGG | - | tig0030488:24543-24562 | Msa1443620:intron | 30.0% | |
!!! | AAGTGTTGTTTTTATGTCAC+CGG | + | tig0030488:24706-24725 | None:intergenic | 30.0% |
!!! | GGTGCTATACTAAACTTTTT+TGG | - | tig0030488:24843-24862 | Msa1443620:intron | 30.0% |
AAATAGCAAGACCAAAAGTT+TGG | - | tig0030488:24898-24917 | Msa1443620:intron | 30.0% | |
AACAGGTTTCATATATCGAA+TGG | + | tig0030488:25171-25190 | None:intergenic | 30.0% | |
AAGAATAGTAGTTTCACACA+GGG | - | tig0030488:25281-25300 | Msa1443620:intron | 30.0% | |
GTTCTCTTCAATGAAAACAA+CGG | + | tig0030488:25360-25379 | None:intergenic | 30.0% | |
TCATTGAAGAGAACAAGATT+TGG | - | tig0030488:25366-25385 | Msa1443620:intron | 30.0% | |
AAAAAAAGATCCAAAGTGGT+GGG | - | tig0030488:25499-25518 | Msa1443620:intron | 30.0% | |
TATTGTATAATCATCACCTC+TGG | + | tig0030488:25546-25565 | None:intergenic | 30.0% | |
! | TTGACAGCAATTGATAATCT+TGG | - | tig0030488:25635-25654 | Msa1443620:CDS | 30.0% |
! | ATTGATAATCTTGGTCAGAT+AGG | - | tig0030488:25644-25663 | Msa1443620:CDS | 30.0% |
!! | AAAGTGCTTATGCTTTTCTT+TGG | + | tig0030488:22139-22158 | None:intergenic | 30.0% |
TTGTGTCTTTAGTAAGCATT+TGG | - | tig0030488:25705-25724 | Msa1443620:CDS | 30.0% | |
! | GTAAGCATTTGGAATTATCT+AGG | - | tig0030488:25716-25735 | Msa1443620:CDS | 30.0% |
AGAGTTAAAGTAAGCATAAG+AGG | + | tig0030488:25800-25819 | None:intergenic | 30.0% | |
TACGTAGCTTCAGTAATAAT+TGG | - | tig0030488:25875-25894 | Msa1443620:CDS | 30.0% | |
! | GCCATTATATCAGAACTTTT+TGG | - | tig0030488:22385-22404 | Msa1443620:CDS | 30.0% |
! | CCCAAAAAGTTCTGATATAA+TGG | + | tig0030488:25936-25955 | None:intergenic | 30.0% |
CAAAGAAGCTAAGAAACAAT+TGG | - | tig0030488:22504-22523 | Msa1443620:CDS | 30.0% | |
! | TTGGAAAGCATAGAATAGAA+GGG | - | tig0030488:22533-22552 | Msa1443620:CDS | 30.0% |
!!! | TGCTGTTGTTTCACTTATTT+TGG | - | tig0030488:26177-26196 | Msa1443620:intron | 30.0% |
!!! | TGTTGTTTCACTTATTTTGG+TGG | - | tig0030488:26180-26199 | Msa1443620:intron | 30.0% |
! | AGGACAAGAAAGTTTTACAA+AGG | - | tig0030488:22658-22677 | Msa1443620:CDS | 30.0% |
CTATTTGTGGCATGTATTTG+TGG | - | tig0030488:22052-22071 | Msa1443620:CDS | 35.0% | |
!! | TTGACAGCAGTTGATAATCT+TGG | - | tig0030488:22088-22107 | Msa1443620:CDS | 35.0% |
!! | GTTGATAATCTTGGTCAGAT+AGG | - | tig0030488:22097-22116 | Msa1443620:CDS | 35.0% |
!! | TATTTAGGACGTGTTTTCTC+CGG | - | tig0030488:22184-22203 | Msa1443620:CDS | 35.0% |
! | AGAGTCAAAGAAAGCATAAG+AGG | + | tig0030488:22253-22272 | None:intergenic | 35.0% |
TATGCAGCTTCAGTGATTAT+CGG | - | tig0030488:22328-22347 | Msa1443620:CDS | 35.0% | |
!!! | GATTTTGTTTTGGTGCTCAA+TGG | - | tig0030488:22350-22369 | Msa1443620:CDS | 35.0% |
! | GGAAGTATAACAAGTCCAAT+TGG | - | tig0030488:22439-22458 | Msa1443620:CDS | 35.0% |
!! | AAGAAACAATTGGAAGCACT+TGG | - | tig0030488:22514-22533 | Msa1443620:CDS | 35.0% |
! | CTTGGAAAGCATAGAATAGA+AGG | - | tig0030488:22532-22551 | Msa1443620:CDS | 35.0% |
!!! | TTAACCTTATTTTGGTGGCT+AGG | - | tig0030488:22638-22657 | Msa1443620:CDS | 35.0% |
ATATAGGGAAGAAGCTGAAA+TGG | - | tig0030488:22696-22715 | Msa1443620:CDS | 35.0% | |
ACAGAAGAAGATGACAAAGT+TGG | - | tig0030488:22742-22761 | Msa1443620:CDS | 35.0% | |
CAACTTAGAAATAGGGCAAA+TGG | - | tig0030488:22775-22794 | Msa1443620:CDS | 35.0% | |
AGAAATAGGGCAAATGGTTA+AGG | - | tig0030488:22781-22800 | Msa1443620:CDS | 35.0% | |
TGATCTATGACATGGGATAT+CGG | + | tig0030488:22816-22835 | None:intergenic | 35.0% | |
GGATCTATGATCTATGACAT+GGG | + | tig0030488:22823-22842 | None:intergenic | 35.0% | |
TGGATCTATGATCTATGACA+TGG | + | tig0030488:22824-22843 | None:intergenic | 35.0% | |
!!! | TATTGGTTTTCAAGTGTGAG+TGG | + | tig0030488:23125-23144 | None:intergenic | 35.0% |
TTATACTTGATCCAAGCACT+AGG | - | tig0030488:23175-23194 | Msa1443620:intron | 35.0% | |
TCATTCATTCAGTGTATGAG+TGG | + | tig0030488:23413-23432 | None:intergenic | 35.0% | |
! | CAATAAGCCTTTCTAGTGAA+AGG | - | tig0030488:23700-23719 | Msa1443620:CDS | 35.0% |
ATGCTCCCAAAAAAATATGG+TGG | - | tig0030488:23819-23838 | Msa1443620:intron | 35.0% | |
CTCTACTATAAGGTCAAGAA+AGG | - | tig0030488:23896-23915 | Msa1443620:intron | 35.0% | |
! | ACCTTTTGTAAAGGTGATGT+TGG | - | tig0030488:24102-24121 | Msa1443620:intron | 35.0% |
TCCAACATCACCTTTACAAA+AGG | + | tig0030488:24106-24125 | None:intergenic | 35.0% | |
! | TTTTGTAAAGGTGATGTTGG+AGG | - | tig0030488:24105-24124 | Msa1443620:intron | 35.0% |
TATTAACTCATCTGCTGATG+AGG | + | tig0030488:24135-24154 | None:intergenic | 35.0% | |
GGTGACATAAAAACAACACT+TGG | - | tig0030488:24705-24724 | Msa1443620:intron | 35.0% | |
TAAGGAGGTTTAGTGTACTT+TGG | + | tig0030488:24737-24756 | None:intergenic | 35.0% | |
!! | AAAGATTTTGGTAGCAACGT+TGG | - | tig0030488:24765-24784 | Msa1443620:intron | 35.0% |
ATTGTTAAAACTACCCAAGG+TGG | + | tig0030488:24822-24841 | None:intergenic | 35.0% | |
CCTATTGTTAAAACTACCCA+AGG | + | tig0030488:24825-24844 | None:intergenic | 35.0% | |
!!! | CCTTGGGTAGTTTTAACAAT+AGG | - | tig0030488:24822-24841 | Msa1443620:intron | 35.0% |
! | AGACACATTTGCCAAACTTT+TGG | + | tig0030488:24912-24931 | None:intergenic | 35.0% |
! | TTCTCAGTCTTTTGCAAACA+CGG | - | tig0030488:24953-24972 | Msa1443620:intron | 35.0% |
GGAATTCTTAAAGGCTATGT+TGG | - | tig0030488:25029-25048 | Msa1443620:intron | 35.0% | |
AAAGCAAAAGAAATAGCAGC+AGG | + | tig0030488:25140-25159 | None:intergenic | 35.0% | |
TCGACAAGTTAATGAGCTTA+AGG | - | tig0030488:25190-25209 | Msa1443620:intron | 35.0% | |
GTGTGAAACTACTATTCTTC+TGG | + | tig0030488:25280-25299 | None:intergenic | 35.0% | |
GAAGAATAGTAGTTTCACAC+AGG | - | tig0030488:25280-25299 | Msa1443620:intron | 35.0% | |
! | GCAGAGTAAAAAACTAGCTT+TGG | - | tig0030488:25388-25407 | Msa1443620:intron | 35.0% |
CTCCAAAAAAAGATCCAAAG+TGG | - | tig0030488:25495-25514 | Msa1443620:intron | 35.0% | |
!!! | CACCACTTTGGATCTTTTTT+TGG | + | tig0030488:25500-25519 | None:intergenic | 35.0% |
CAAAAAAAGATCCAAAGTGG+TGG | - | tig0030488:25498-25517 | Msa1443620:intron | 35.0% | |
CTATTTGTGGCATGTATTTG+TGG | - | tig0030488:22052-22071 | Msa1443620:CDS | 35.0% | |
!!! | GATTTTGTTTTGGTGCTCAA+TGG | - | tig0030488:22350-22369 | Msa1443620:CDS | 35.0% |
TTAAGCACATATAACCCAAG+TGG | + | tig0030488:26004-26023 | None:intergenic | 35.0% | |
!! | AAGAAACAATTGGAAGCACT+TGG | - | tig0030488:22514-22533 | Msa1443620:CDS | 35.0% |
! | CTTGGAAAGCATAGAATAGA+AGG | - | tig0030488:22532-22551 | Msa1443620:CDS | 35.0% |
TGCAGCGGTAATAATAATGA+AGG | + | tig0030488:26146-26165 | None:intergenic | 35.0% | |
!!! | ATTACCGCTGCAACATTTTT+TGG | - | tig0030488:26154-26173 | Msa1443620:CDS | 35.0% |
!!! | TTTCACTTATTTTGGTGGCT+AGG | - | tig0030488:26185-26204 | Msa1443620:intron | 35.0% |
ACAAAGGTGACATATACAAG+AGG | - | tig0030488:22674-22693 | Msa1443620:CDS | 35.0% | |
GTGGCATGTATTTGTGGTAT+TGG | - | tig0030488:22058-22077 | Msa1443620:CDS | 40.0% | |
! | GCATGTATTTGTGGTATTGG+TGG | - | tig0030488:22061-22080 | Msa1443620:CDS | 40.0% |
! | AAAGAAAGCATAAGAGGACG+AGG | + | tig0030488:22247-22266 | None:intergenic | 40.0% |
!! | GGACACCTTTTGATAGCATT+TGG | - | tig0030488:22289-22308 | Msa1443620:CDS | 40.0% |
GCACACCAAATGCTATCAAA+AGG | + | tig0030488:22297-22316 | None:intergenic | 40.0% | |
!! | ATAGCATTTGGTGTGCCAAA+GGG | - | tig0030488:22301-22320 | Msa1443620:CDS | 40.0% |
GTGCTTAATGTGAAGATCAC+TGG | - | tig0030488:22469-22488 | Msa1443620:CDS | 40.0% | |
AAAGCATAGAATAGAAGGGC+AGG | - | tig0030488:22537-22556 | Msa1443620:CDS | 40.0% | |
ATTGCAGCTGCAACTTTCTT+TGG | - | tig0030488:22607-22626 | Msa1443620:CDS | 40.0% | |
TTGTCCTAGCCACCAAAATA+AGG | + | tig0030488:22645-22664 | None:intergenic | 40.0% | |
AAGATGACAAAGTTGGCATG+CGG | - | tig0030488:22749-22768 | Msa1443620:CDS | 40.0% | |
TGCGGTGACAACTTAGAAAT+AGG | - | tig0030488:22767-22786 | Msa1443620:CDS | 40.0% | |
GCGGTGACAACTTAGAAATA+GGG | - | tig0030488:22768-22787 | Msa1443620:CDS | 40.0% | |
! | AAAAAGGGCAGACACGATTT+TGG | - | tig0030488:22931-22950 | Msa1443620:CDS | 40.0% |
! | AAAAGGGCAGACACGATTTT+GGG | - | tig0030488:22932-22951 | Msa1443620:CDS | 40.0% |
! | GTGAGTGGTTAGTCATTCAT+AGG | + | tig0030488:23110-23129 | None:intergenic | 40.0% |
ACACTTGAGGGGAAGATTAT+TGG | + | tig0030488:23142-23161 | None:intergenic | 40.0% | |
TGGTGGAAACTTACACTTGA+GGG | + | tig0030488:23154-23173 | None:intergenic | 40.0% | |
CTTGGATCAAGTATAAGTGG+TGG | + | tig0030488:23171-23190 | None:intergenic | 40.0% | |
GTGCTTGGATCAAGTATAAG+TGG | + | tig0030488:23174-23193 | None:intergenic | 40.0% | |
AAGATTGAGATCCTAGTGCT+TGG | + | tig0030488:23189-23208 | None:intergenic | 40.0% | |
ATTAGAACCCAAGTTCAGCT+TGG | + | tig0030488:23219-23238 | None:intergenic | 40.0% | |
! | TGGGTTCTAATACCACTTGT+TGG | - | tig0030488:23228-23247 | Msa1443620:intron | 40.0% |
! | GGGTTCTAATACCACTTGTT+GGG | - | tig0030488:23229-23248 | Msa1443620:intron | 40.0% |
! | GGTTCTAATACCACTTGTTG+GGG | - | tig0030488:23230-23249 | Msa1443620:intron | 40.0% |
! | TACCACTTGTTGGGGAAATA+AGG | - | tig0030488:23238-23257 | Msa1443620:intron | 40.0% |
! | ACCACTTGTTGGGGAAATAA+GGG | - | tig0030488:23239-23258 | Msa1443620:intron | 40.0% |
ATATTCCCGGAGCATAATAG+AGG | - | tig0030488:23287-23306 | Msa1443620:intron | 40.0% | |
TATTCCCGGAGCATAATAGA+GGG | - | tig0030488:23288-23307 | Msa1443620:intron | 40.0% | |
ATCATGTTGAGAATCCATGG+TGG | + | tig0030488:23464-23483 | None:intergenic | 40.0% | |
ATGCATTAGAGAATCCATGG+TGG | + | tig0030488:23503-23522 | None:intergenic | 40.0% | |
GGTATGCATTAGAGAATCCA+TGG | + | tig0030488:23506-23525 | None:intergenic | 40.0% | |
ATAGTAGAGAGCAAGAGAGT+CGG | + | tig0030488:23885-23904 | None:intergenic | 40.0% | |
CTCTCTTGCTCTCTACTATA+AGG | - | tig0030488:23886-23905 | Msa1443620:intron | 40.0% | |
CTTGTTGAGAAGAAGCAACA+TGG | + | tig0030488:23936-23955 | None:intergenic | 40.0% | |
!! | TTTACTTTTCTCCGAGAGAG+AGG | - | tig0030488:23991-24010 | Msa1443620:intron | 40.0% |
GCTCATATGATTGCTCATTG+TGG | - | tig0030488:24025-24044 | Msa1443620:intron | 40.0% | |
CAAAAGGTTGCAAAAAGAGC+AGG | + | tig0030488:24090-24109 | None:intergenic | 40.0% | |
TTAAATAGAGAGAGAGAGGG+AGG | + | tig0030488:24436-24455 | None:intergenic | 40.0% | |
! | GGTAATTCCATTGGTGTTCA+TGG | - | tig0030488:24564-24583 | Msa1443620:intron | 40.0% |
! | TCCATTGGTGTTCATGGTTT+AGG | - | tig0030488:24570-24589 | Msa1443620:intron | 40.0% |
TCCTAAACCATGAACACCAA+TGG | + | tig0030488:24574-24593 | None:intergenic | 40.0% | |
TACATGTTCGGTCTATACTC+CGG | - | tig0030488:24684-24703 | Msa1443620:intron | 40.0% | |
! | TCTCAGTCTTTTGCAAACAC+GGG | - | tig0030488:24954-24973 | Msa1443620:intron | 40.0% |
AAGAATTTCCCTGAATCTCG+TGG | - | tig0030488:24996-25015 | Msa1443620:intron | 40.0% | |
!!! | GCGGTTTTGGGAATTCTTAA+AGG | - | tig0030488:25020-25039 | Msa1443620:intron | 40.0% |
!! | AAAGGCTATGTTGGTCTTAG+TGG | - | tig0030488:25038-25057 | Msa1443620:intron | 40.0% |
!! | AGCTCATTAACTTGTCGAAC+AGG | + | tig0030488:25188-25207 | None:intergenic | 40.0% |
TATGTTTCACTTGGTCTAGC+TGG | - | tig0030488:25230-25249 | Msa1443620:intron | 40.0% | |
TCAATGAAAACAACGGCAAG+TGG | + | tig0030488:25353-25372 | None:intergenic | 40.0% | |
! | GTTACTATTTGCACTGGTGA+AGG | + | tig0030488:25419-25438 | None:intergenic | 40.0% |
CCTTCTGTTACTATTTGCAC+TGG | + | tig0030488:25425-25444 | None:intergenic | 40.0% | |
CCAGTGCAAATAGTAACAGA+AGG | - | tig0030488:25422-25441 | Msa1443620:intron | 40.0% | |
!! | TATCTAGGACGTGTTTTCTC+AGG | - | tig0030488:25731-25750 | Msa1443620:CDS | 40.0% |
AAAGTAAGCATAAGAGGACG+AGG | + | tig0030488:25794-25813 | None:intergenic | 40.0% | |
AACTCTCTTTGTCTCATGTG+TGG | - | tig0030488:25814-25833 | Msa1443620:CDS | 40.0% | |
ACTCTCTTTGTCTCATGTGT+GGG | - | tig0030488:25815-25834 | Msa1443620:CDS | 40.0% | |
GCACATCAAATGCTATCAGA+AGG | + | tig0030488:25844-25863 | None:intergenic | 40.0% | |
ATAGCATTTGATGTGCCAGA+GGG | - | tig0030488:25848-25867 | Msa1443620:CDS | 40.0% | |
GTGCTTAATGTGAAGATCAC+TGG | - | tig0030488:22469-22488 | Msa1443620:CDS | 40.0% | |
AGCACCAAAAAATGTTGCAG+CGG | + | tig0030488:26161-26180 | None:intergenic | 40.0% | |
GTACAGAGAAGAAGCTGAAA+TGG | - | tig0030488:26243-26262 | Msa1443620:CDS | 40.0% | |
AAAGAACGTGGAAAAGACAG+AGG | - | tig0030488:26273-26292 | Msa1443620:CDS | 40.0% | |
ACAGAGGAAGATGACAAAGT+TGG | - | tig0030488:26289-26308 | Msa1443620:CDS | 40.0% | |
ACTCTCTTTGTCTCGTGTGT+GGG | - | tig0030488:22268-22287 | Msa1443620:CDS | 45.0% | |
!! | GATAGCATTTGGTGTGCCAA+AGG | - | tig0030488:22300-22319 | Msa1443620:CDS | 45.0% |
GGGCAGGAATTGAATTGTGT+TGG | - | tig0030488:22553-22572 | Msa1443620:CDS | 45.0% | |
TAGGGAAGAAGCTGAAATGG+TGG | - | tig0030488:22699-22718 | Msa1443620:CDS | 45.0% | |
! | AATGGTGGAGGTAAAGAACG+AGG | - | tig0030488:22714-22733 | Msa1443620:CDS | 45.0% |
! | ATGGTGGAGGTAAAGAACGA+GGG | - | tig0030488:22715-22734 | Msa1443620:CDS | 45.0% |
GGTGGAAACTTACACTTGAG+GGG | + | tig0030488:23153-23172 | None:intergenic | 45.0% | |
! | GTGGTGGAAACTTACACTTG+AGG | + | tig0030488:23155-23174 | None:intergenic | 45.0% |
! | CCACTTGTTGGGGAAATAAG+GGG | - | tig0030488:23240-23259 | Msa1443620:intron | 45.0% |
TGTCTCCCTCTATTATGCTC+CGG | + | tig0030488:23296-23315 | None:intergenic | 45.0% | |
AAGAGAGTCGGTCTCAAAAG+TGG | + | tig0030488:23873-23892 | None:intergenic | 45.0% | |
! | GTTGGTGCTTACTGCTTACT+TGG | + | tig0030488:24519-24538 | None:intergenic | 45.0% |
!! | ATGGCGGTTGGTAATTCCAT+TGG | - | tig0030488:24555-24574 | Msa1443620:intron | 45.0% |
CTCACTGTCCAATTCATCAC+CGG | - | tig0030488:24606-24625 | Msa1443620:intron | 45.0% | |
TTTCGCCTCCTTCCTAATCA+TGG | - | tig0030488:24644-24663 | Msa1443620:intron | 45.0% | |
GTATAGACCGAACATGTAGG+TGG | + | tig0030488:24682-24701 | None:intergenic | 45.0% | |
GGAGTATAGACCGAACATGT+AGG | + | tig0030488:24685-24704 | None:intergenic | 45.0% | |
TCAACGAACTCTATCCACCT+TGG | - | tig0030488:24805-24824 | Msa1443620:intron | 45.0% | |
CAACGAACTCTATCCACCTT+GGG | - | tig0030488:24806-24825 | Msa1443620:intron | 45.0% | |
TGGTCTAGCTGGATTCTTGT+TGG | - | tig0030488:25241-25260 | Msa1443620:intron | 45.0% | |
AGTTTCACACAGGGTGAGTT+TGG | - | tig0030488:25290-25309 | Msa1443620:intron | 45.0% | |
! | GTTTGGTTTAAGTGCTGCTG+TGG | - | tig0030488:25307-25326 | Msa1443620:intron | 45.0% |
AACACATCTTCCCACCACTT+TGG | + | tig0030488:25512-25531 | None:intergenic | 45.0% | |
GTATAATCATCACCTCTGGC+TGG | + | tig0030488:25542-25561 | None:intergenic | 45.0% | |
GTGGCATGTATTTGTGGTGT+TGG | - | tig0030488:25605-25624 | Msa1443620:intron | 45.0% | |
! | GCATGTATTTGTGGTGTTGG+TGG | - | tig0030488:25608-25627 | Msa1443620:intron | 45.0% |
GATAGCATTTGATGTGCCAG+AGG | - | tig0030488:25847-25866 | Msa1443620:CDS | 45.0% | |
GAAGTGTAGCAAGTCCACTT+GGG | - | tig0030488:25987-26006 | Msa1443620:CDS | 45.0% | |
GGGCGTGAATTGAATTGTGT+TGG | - | tig0030488:26100-26119 | Msa1443620:CDS | 45.0% | |
CAGAGAAGAAGCTGAAATGG+TGG | - | tig0030488:26246-26265 | Msa1443620:CDS | 45.0% | |
AGAAGAAGCTGAAATGGTGG+AGG | - | tig0030488:26249-26268 | Msa1443620:CDS | 45.0% | |
! | AATGGTGGAGGTAAAGAACG+TGG | - | tig0030488:22714-22733 | Msa1443620:CDS | 45.0% |
GACTCTCTTTGTCTCGTGTG+TGG | - | tig0030488:22267-22286 | Msa1443620:CDS | 50.0% | |
GAAGCTGCATAGAGACCCTT+TGG | + | tig0030488:22319-22338 | None:intergenic | 50.0% | |
GGAAGAAGCTGAAATGGTGG+AGG | - | tig0030488:22702-22721 | Msa1443620:CDS | 50.0% | |
GAACCCAAGTTCAGCTTGGT+GGG | + | tig0030488:23215-23234 | None:intergenic | 50.0% | |
AGAACCCAAGTTCAGCTTGG+TGG | + | tig0030488:23216-23235 | None:intergenic | 50.0% | |
! | CCCCTTATTTCCCCAACAAG+TGG | + | tig0030488:23243-23262 | None:intergenic | 50.0% |
GTCTCCCTCTATTATGCTCC+GGG | + | tig0030488:23295-23314 | None:intergenic | 50.0% | |
!! | CCAACGATTAGCCTCTCTCT+CGG | + | tig0030488:24005-24024 | None:intergenic | 50.0% |
CGAGAGAGAGGCTAATCGTT+GGG | - | tig0030488:24003-24022 | Msa1443620:intron | 50.0% | |
CTGTCCAATTCATCACCGGA+CGG | - | tig0030488:24610-24629 | Msa1443620:intron | 50.0% | |
GAAAATGACGAACCACCGTC+CGG | + | tig0030488:24628-24647 | None:intergenic | 50.0% | |
! | GTTCGTTGACTAGTCCTGCA+AGG | + | tig0030488:24794-24813 | None:intergenic | 50.0% |
TAATCATCACCTCTGGCTGG+TGG | + | tig0030488:25539-25558 | None:intergenic | 50.0% | |
! | GGAAGTGTAGCAAGTCCACT+TGG | - | tig0030488:25986-26005 | Msa1443620:CDS | 50.0% |
AGTTGGTCAACAGCAGCATG+TGG | - | tig0030488:26306-26325 | Msa1443620:CDS | 50.0% | |
TGCTCCCACCAAGCTGAACT+TGG | - | tig0030488:23208-23227 | Msa1443620:intron | 55.0% | |
GCTCCCACCAAGCTGAACTT+GGG | - | tig0030488:23209-23228 | Msa1443620:intron | 55.0% | |
CCGAGAGAGAGGCTAATCGT+TGG | - | tig0030488:24002-24021 | Msa1443620:intron | 55.0% | |
TCCAATTCATCACCGGACGG+TGG | - | tig0030488:24613-24632 | Msa1443620:intron | 55.0% | |
ACCACCGTCCGGTGATGAAT+TGG | + | tig0030488:24617-24636 | None:intergenic | 55.0% | |
GGCTGCCATGATTAGGAAGG+AGG | + | tig0030488:24652-24671 | None:intergenic | 55.0% | |
TTCCTAATCATGGCAGCCGC+CGG | - | tig0030488:24654-24673 | Msa1443620:intron | 55.0% | |
ACCGAACATGTAGGTGGCTC+CGG | + | tig0030488:24676-24695 | None:intergenic | 55.0% | |
! | AGCAACGTTGGTGTCCTTGC+AGG | - | tig0030488:24777-24796 | Msa1443620:intron | 55.0% |
TTTCCCTGAATCTCGTGGCG+CGG | - | tig0030488:25001-25020 | Msa1443620:intron | 55.0% | |
AAACCGCGCCACGAGATTCA+GGG | + | tig0030488:25007-25026 | None:intergenic | 55.0% | |
AAAACCGCGCCACGAGATTC+AGG | + | tig0030488:25008-25027 | None:intergenic | 55.0% | |
! | TGAATCTCGTGGCGCGGTTT+TGG | - | tig0030488:25007-25026 | Msa1443620:intron | 55.0% |
! | GAATCTCGTGGCGCGGTTTT+GGG | - | tig0030488:25008-25027 | Msa1443620:intron | 55.0% |
GTGTTCAATCCACCAGCCAG+AGG | - | tig0030488:25527-25546 | Msa1443620:intron | 55.0% | |
GAAGCTACGTAGAGACCCTC+TGG | + | tig0030488:25866-25885 | None:intergenic | 55.0% | |
GGCGGCTGCCATGATTAGGA+AGG | + | tig0030488:24655-24674 | None:intergenic | 60.0% | |
GAACATGTAGGTGGCTCCGG+CGG | + | tig0030488:24673-24692 | None:intergenic | 60.0% | |
GCCGGAGCCACCTACATGTT+CGG | - | tig0030488:24672-24691 | Msa1443620:intron | 60.0% | |
CTCCGGCGGCTGCCATGATT+AGG | + | tig0030488:24659-24678 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0030488 | gene | 22043 | 26339 | 22043 | ID=Msa1443620;Name=Msa1443620 |
tig0030488 | mRNA | 22043 | 26339 | 22043 | ID=Msa1443620-mRNA-1;Parent=Msa1443620;Name=Msa1443620-mRNA-1;_AED=0.32;_eAED=0.32;_QI=0|0|0|1|0.2|0.16|6|0|642 |
tig0030488 | exon | 26210 | 26339 | 26210 | ID=Msa1443620-mRNA-1:exon:14026;Parent=Msa1443620-mRNA-1 |
tig0030488 | exon | 25954 | 26191 | 25954 | ID=Msa1443620-mRNA-1:exon:14025;Parent=Msa1443620-mRNA-1 |
tig0030488 | exon | 25808 | 25938 | 25808 | ID=Msa1443620-mRNA-1:exon:14024;Parent=Msa1443620-mRNA-1 |
tig0030488 | exon | 25623 | 25768 | 25623 | ID=Msa1443620-mRNA-1:exon:14023;Parent=Msa1443620-mRNA-1 |
tig0030488 | exon | 23555 | 23779 | 23555 | ID=Msa1443620-mRNA-1:exon:14022;Parent=Msa1443620-mRNA-1 |
tig0030488 | exon | 22043 | 23101 | 22043 | ID=Msa1443620-mRNA-1:exon:14021;Parent=Msa1443620-mRNA-1 |
tig0030488 | CDS | 26210 | 26339 | 26210 | ID=Msa1443620-mRNA-1:cds;Parent=Msa1443620-mRNA-1 |
tig0030488 | CDS | 25954 | 26191 | 25954 | ID=Msa1443620-mRNA-1:cds;Parent=Msa1443620-mRNA-1 |
tig0030488 | CDS | 25808 | 25938 | 25808 | ID=Msa1443620-mRNA-1:cds;Parent=Msa1443620-mRNA-1 |
tig0030488 | CDS | 25623 | 25768 | 25623 | ID=Msa1443620-mRNA-1:cds;Parent=Msa1443620-mRNA-1 |
tig0030488 | CDS | 23555 | 23779 | 23555 | ID=Msa1443620-mRNA-1:cds;Parent=Msa1443620-mRNA-1 |
tig0030488 | CDS | 22043 | 23101 | 22043 | ID=Msa1443620-mRNA-1:cds;Parent=Msa1443620-mRNA-1 |
Gene Sequence |
Protein sequence |