Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0462450 | XP_003602726.1 | 96.372 | 689 | 16 | 4 | 1 | 689 | 1 | 680 | 0.0 | 1370 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0462450 | sp|Q2HXL0|RBOHC_SOLTU | 65.345 | 681 | 218 | 8 | 19 | 690 | 16 | 687 | 0.0 | 932 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0462450 | G7J2R2 | 96.372 | 689 | 16 | 4 | 1 | 689 | 1 | 680 | 0.0 | 1370 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0058760 | Msa0462450 | 0.848460 | 6.043026e-60 | -8.615850e-47 |
| Msa0087550 | Msa0462450 | 0.818309 | 2.096394e-52 | -8.615850e-47 |
| Msa0094710 | Msa0462450 | 0.865582 | 5.319584e-65 | -8.615850e-47 |
| Msa0103590 | Msa0462450 | 0.830976 | 2.168271e-55 | -8.615850e-47 |
| Msa0134270 | Msa0462450 | 0.802626 | 5.130192e-49 | -8.615850e-47 |
| Msa0151220 | Msa0462450 | 0.802890 | 4.526027e-49 | -8.615850e-47 |
| Msa0213880 | Msa0462450 | 0.803583 | 3.253381e-49 | -8.615850e-47 |
| Msa0223140 | Msa0462450 | 0.800829 | 1.199191e-48 | -8.615850e-47 |
| Msa0224130 | Msa0462450 | 0.805899 | 1.068333e-49 | -8.615850e-47 |
| Msa0403470 | Msa0462450 | -0.803677 | 3.109837e-49 | -8.615850e-47 |
| Msa0417790 | Msa0462450 | -0.816986 | 4.167176e-52 | -8.615850e-47 |
| Msa0427560 | Msa0462450 | 0.814420 | 1.554768e-51 | -8.615850e-47 |
| Msa0428200 | Msa0462450 | 0.867835 | 1.021079e-65 | -8.615850e-47 |
| Msa0462450 | Msa0474560 | 0.937895 | 1.644001e-98 | -8.615850e-47 |
| Msa0462450 | Msa0476600 | -0.807210 | 5.648325e-50 | -8.615850e-47 |
| Msa0462450 | Msa0518190 | 0.821044 | 4.978203e-53 | -8.615850e-47 |
| Msa0462450 | Msa0559450 | -0.800241 | 1.580417e-48 | -8.615850e-47 |
| Msa0462450 | Msa0588590 | 0.834627 | 2.686781e-56 | -8.615850e-47 |
| Msa0462450 | Msa0588620 | 0.826967 | 2.028375e-54 | -8.615850e-47 |
| Msa0462450 | Msa0611220 | 0.802678 | 5.005054e-49 | -8.615850e-47 |
| Msa0462450 | Msa0628880 | 0.818011 | 2.448624e-52 | -8.615850e-47 |
| Msa0462450 | Msa0660650 | 0.822757 | 1.996976e-53 | -8.615850e-47 |
| Msa0462450 | Msa0693750 | 0.804231 | 2.385565e-49 | -8.615850e-47 |
| Msa0462450 | Msa0772490 | 0.800533 | 1.378213e-48 | -8.615850e-47 |
| Msa0462450 | Msa0798450 | 0.810779 | 9.726599e-51 | -8.615850e-47 |
| Msa0462450 | Msa0810440 | 0.839759 | 1.307295e-57 | -8.615850e-47 |
| Msa0462450 | Msa0817710 | 0.857432 | 1.638906e-62 | -8.615850e-47 |
| Msa0462450 | Msa0862620 | 0.814080 | 1.848026e-51 | -8.615850e-47 |
| Msa0462450 | Msa0866130 | 0.806803 | 6.888278e-50 | -8.615850e-47 |
| Msa0462450 | Msa0873910 | 0.829532 | 4.884312e-55 | -8.615850e-47 |
| Msa0462450 | Msa0906660 | 0.813844 | 2.083283e-51 | -8.615850e-47 |
| Msa0462450 | Msa0968470 | -0.802016 | 6.852390e-49 | -8.615850e-47 |
| Msa0462450 | Msa0975960 | 0.827738 | 1.325429e-54 | -8.615850e-47 |
| Msa0462450 | Msa1011250 | 0.863976 | 1.694115e-64 | -8.615850e-47 |
| Msa0462450 | Msa1016960 | 0.810604 | 1.061442e-50 | -8.615850e-47 |
| Msa0462450 | Msa1031460 | 0.810007 | 1.427648e-50 | -8.615850e-47 |
| Msa0462450 | Msa1041720 | 0.815385 | 9.498837e-52 | -8.615850e-47 |
| Msa0462450 | Msa1068380 | 0.838905 | 2.178569e-57 | -8.615850e-47 |
| Msa0462450 | Msa1070540 | 0.812395 | 4.333226e-51 | -8.615850e-47 |
| Msa0462450 | Msa1089190 | 0.809415 | 1.913608e-50 | -8.615850e-47 |
| Msa0462450 | Msa1101240 | 0.812999 | 3.194737e-51 | -8.615850e-47 |
| Msa0462450 | Msa1114680 | 0.823291 | 1.499396e-53 | -8.615850e-47 |
| Msa0462450 | Msa1121300 | 0.838623 | 2.576468e-57 | -8.615850e-47 |
| Msa0462450 | Msa1121920 | -0.804625 | 1.974179e-49 | -8.615850e-47 |
| Msa0462450 | Msa1136910 | 0.806298 | 8.804035e-50 | -8.615850e-47 |
| Msa0462450 | Msa1156490 | 0.811009 | 8.674261e-51 | -8.615850e-47 |
| Msa0462450 | Msa1185270 | 0.801634 | 8.207279e-49 | -8.615850e-47 |
| Msa0462450 | Msa1208450 | -0.827097 | 1.888508e-54 | -8.615850e-47 |
| Msa0462450 | Msa1208990 | 0.856762 | 2.583727e-62 | -8.615850e-47 |
| Msa0462450 | Msa1217260 | 0.805484 | 1.305827e-49 | -8.615850e-47 |
| Msa0462450 | Msa1221220 | 0.800686 | 1.282702e-48 | -8.615850e-47 |
| Msa0462450 | Msa1239210 | 0.802664 | 5.039008e-49 | -8.615850e-47 |
| Msa0462450 | Msa1268230 | 0.861702 | 8.523594e-64 | -8.615850e-47 |
| Msa0462450 | Msa1279060 | 0.825982 | 3.482140e-54 | -8.615850e-47 |
| Msa0462450 | Msa1298390 | -0.802055 | 6.726911e-49 | -8.615850e-47 |
| Msa0462450 | Msa1299910 | 0.808498 | 3.006634e-50 | -8.615850e-47 |
| Msa0462450 | Msa1318550 | 0.810421 | 1.162465e-50 | -8.615850e-47 |
| Msa0462450 | Msa1328240 | 0.874436 | 6.764546e-68 | -8.615850e-47 |
| Msa0462450 | Msa1350700 | 0.818364 | 2.037541e-52 | -8.615850e-47 |
| Msa0462450 | Msa1360260 | 0.817277 | 3.585049e-52 | -8.615850e-47 |
| Msa0462450 | Msa1364080 | 0.806421 | 8.292127e-50 | -8.615850e-47 |
| Msa0462450 | Msa1379020 | 0.850418 | 1.720326e-60 | -8.615850e-47 |
| Msa0462450 | Msa1388690 | 0.808107 | 3.642824e-50 | -8.615850e-47 |
| Msa0462450 | Msa1407880 | 0.834571 | 2.775581e-56 | -8.615850e-47 |
| Msa0254260 | Msa0462450 | 0.814658 | 1.377027e-51 | -8.615850e-47 |
| Msa0265270 | Msa0462450 | 0.806964 | 6.368347e-50 | -8.615850e-47 |
| Msa0266220 | Msa0462450 | 0.819788 | 9.660446e-53 | -8.615850e-47 |
| Msa0280360 | Msa0462450 | 0.803586 | 3.248405e-49 | -8.615850e-47 |
| Msa0287680 | Msa0462450 | 0.807318 | 5.360747e-50 | -8.615850e-47 |
| Msa0332390 | Msa0462450 | 0.803468 | 3.436361e-49 | -8.615850e-47 |
| Msa0345050 | Msa0462450 | 0.821769 | 3.385116e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0462450 | MtrunA17_Chr3g0131401 | 96.372 | 689 | 16 | 4 | 1 | 689 | 1 | 680 | 0.0 | 1370 |
| Msa0462450 | MtrunA17_Chr8g0385411 | 70.640 | 688 | 171 | 9 | 6 | 690 | 1 | 660 | 0.0 | 995 |
| Msa0462450 | MtrunA17_Chr3g0131381 | 68.214 | 711 | 167 | 13 | 1 | 689 | 1 | 674 | 0.0 | 921 |
| Msa0462450 | MtrunA17_Chr3g0131361 | 62.890 | 706 | 206 | 14 | 1 | 689 | 1 | 667 | 0.0 | 848 |
| Msa0462450 | MtrunA17_Chr7g0272591 | 60.420 | 667 | 225 | 11 | 28 | 689 | 31 | 663 | 0.0 | 795 |
| Msa0462450 | MtrunA17_Chr1g0192121 | 57.271 | 667 | 253 | 11 | 30 | 690 | 11 | 651 | 0.0 | 787 |
| Msa0462450 | MtrunA17_Chr8g0387591 | 52.782 | 665 | 266 | 11 | 71 | 690 | 38 | 699 | 0.0 | 679 |
| Msa0462450 | MtrunA17_Chr2g0301511 | 45.827 | 659 | 312 | 14 | 62 | 689 | 43 | 687 | 0.0 | 571 |
| Msa0462450 | MtrunA17_Chr7g0238371 | 48.727 | 550 | 255 | 9 | 157 | 690 | 71 | 609 | 1.43e-179 | 533 |
| Msa0462450 | MtrunA17_Chr4g0061441 | 44.056 | 572 | 282 | 12 | 141 | 689 | 62 | 618 | 3.09e-159 | 480 |
| Msa0462450 | MtrunA17_Chr2g0291481 | 28.873 | 142 | 88 | 3 | 550 | 689 | 293 | 423 | 3.95e-14 | 76.3 |
| Msa0462450 | MtrunA17_Chr1g0202731 | 27.465 | 142 | 90 | 3 | 550 | 689 | 272 | 402 | 3.99e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0462450 | AT5G47910.1 | 60.402 | 697 | 255 | 10 | 3 | 690 | 10 | 694 | 0.0 | 849 |
| Msa0462450 | AT5G51060.1 | 58.655 | 699 | 241 | 15 | 9 | 690 | 4 | 671 | 0.0 | 799 |
| Msa0462450 | AT5G07390.1 | 58.824 | 629 | 249 | 8 | 67 | 690 | 40 | 663 | 0.0 | 740 |
| Msa0462450 | AT4G25090.1 | 60.854 | 562 | 206 | 7 | 139 | 690 | 67 | 624 | 0.0 | 706 |
| Msa0462450 | AT4G25090.2 | 61.041 | 557 | 201 | 8 | 139 | 690 | 67 | 612 | 0.0 | 697 |
| Msa0462450 | AT5G07390.2 | 55.486 | 638 | 224 | 11 | 67 | 690 | 40 | 631 | 0.0 | 677 |
| Msa0462450 | AT1G64060.1 | 49.505 | 707 | 303 | 13 | 34 | 690 | 3 | 705 | 0.0 | 659 |
| Msa0462450 | AT1G09090.2 | 52.139 | 631 | 251 | 10 | 69 | 690 | 29 | 617 | 0.0 | 658 |
| Msa0462450 | AT1G09090.1 | 52.139 | 631 | 251 | 10 | 69 | 690 | 29 | 617 | 0.0 | 658 |
| Msa0462450 | AT1G19230.2 | 52.277 | 549 | 232 | 7 | 157 | 684 | 164 | 703 | 0.0 | 565 |
| Msa0462450 | AT1G19230.1 | 52.126 | 541 | 219 | 6 | 157 | 684 | 164 | 677 | 0.0 | 558 |
| Msa0462450 | AT4G11230.1 | 54.059 | 542 | 234 | 9 | 156 | 690 | 159 | 692 | 0.0 | 555 |
| Msa0462450 | AT5G60010.1 | 46.561 | 567 | 283 | 11 | 135 | 690 | 78 | 635 | 1.48e-170 | 511 |
| Msa0462450 | AT3G45810.1 | 42.386 | 637 | 333 | 12 | 75 | 689 | 20 | 644 | 1.39e-168 | 507 |
| Msa0462450 | AT5G23980.1 | 30.049 | 203 | 107 | 9 | 490 | 689 | 219 | 389 | 1.58e-13 | 74.7 |
| Msa0462450 | AT5G23990.1 | 28.889 | 180 | 101 | 7 | 513 | 689 | 192 | 347 | 1.02e-12 | 72.0 |
| Msa0462450 | AT5G23990.3 | 30.899 | 178 | 93 | 8 | 516 | 689 | 106 | 257 | 1.35e-12 | 71.2 |
| Msa0462450 | AT5G49740.1 | 30.769 | 143 | 86 | 4 | 550 | 690 | 291 | 422 | 1.50e-12 | 71.6 |
| Msa0462450 | AT5G49740.3 | 30.769 | 143 | 86 | 4 | 550 | 690 | 291 | 422 | 2.11e-12 | 70.9 |
| Msa0462450 | AT5G23990.2 | 32.639 | 144 | 80 | 6 | 550 | 689 | 259 | 389 | 2.44e-12 | 70.9 |
| Msa0462450 | AT5G49730.1 | 30.070 | 143 | 87 | 4 | 550 | 690 | 282 | 413 | 2.75e-12 | 70.5 |
| Msa0462450 | AT5G49740.2 | 30.769 | 143 | 86 | 4 | 550 | 690 | 291 | 422 | 3.07e-12 | 70.1 |
| Msa0462450 | AT5G49730.2 | 29.371 | 143 | 88 | 3 | 550 | 690 | 282 | 413 | 4.71e-12 | 69.7 |
| Msa0462450 | AT1G01580.2 | 30.769 | 143 | 82 | 5 | 550 | 688 | 364 | 493 | 5.19e-12 | 69.7 |
| Msa0462450 | AT1G01580.1 | 30.556 | 144 | 83 | 5 | 550 | 689 | 286 | 416 | 6.33e-12 | 69.3 |
| Msa0462450 | AT5G50160.2 | 28.814 | 177 | 94 | 6 | 532 | 689 | 51 | 214 | 6.53e-12 | 68.9 |
| Msa0462450 | AT5G50160.1 | 28.814 | 177 | 94 | 6 | 532 | 689 | 230 | 393 | 2.14e-11 | 67.8 |
Find 152 sgRNAs with CRISPR-Local
Find 280 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGGCACAATTGAAGGATTTC+TGG | 0.189321 | 3_3:-61471555 | Msa0462450:CDS |
| GAAAGCAACCAACAAGTTAT+TGG | 0.237054 | 3_3:-61469530 | Msa0462450:CDS |
| TCTGTACTGCATGAATTTGT+AGG | 0.273730 | 3_3:+61470393 | None:intergenic |
| CACAGTGTTAAAACTGTTCC+TGG | 0.279333 | 3_3:-61472217 | Msa0462450:CDS |
| CAAGCCTGTGAGAATATTAA+AGG | 0.284085 | 3_3:-61469110 | Msa0462450:intron |
| TCATGGAGATTCAATTAATA+AGG | 0.286862 | 3_3:-61471575 | Msa0462450:CDS |
| TTTCTTCATCATGCTCTTGA+TGG | 0.290201 | 3_3:+61472302 | None:intergenic |
| TGTATTTGTCTATGCCCTTT+TGG | 0.302001 | 3_3:-61469340 | Msa0462450:CDS |
| GGGGAAGAGGTTATGGAAAA+TGG | 0.309185 | 3_3:+61468457 | None:intergenic |
| GTTAGACTATTGAGGGGTTT+AGG | 0.325991 | 3_3:+61469399 | None:intergenic |
| TAACCGCATTATATTATATA+AGG | 0.327795 | 3_3:+61472571 | None:intergenic |
| ATGGAGAAGAAAAGATCTTT+TGG | 0.332853 | 3_3:-61472139 | Msa0462450:CDS |
| TAAGCTTTATGCTTAGCATT+TGG | 0.337702 | 3_3:+61470539 | None:intergenic |
| AAATCATGGGAAGGAGTAAC+AGG | 0.338678 | 3_3:-61469498 | Msa0462450:CDS |
| AATGCTAAGCATAAAGCTTA+AGG | 0.341627 | 3_3:-61470536 | Msa0462450:CDS |
| GAATTTGACTCTGAGACTTC+TGG | 0.342263 | 3_3:+61468387 | None:intergenic |
| ATCTCCTGGGGAAGAGGTTA+TGG | 0.344002 | 3_3:+61468450 | None:intergenic |
| AGTGTTCACATCAGAACATT+AGG | 0.352054 | 3_3:-61468418 | Msa0462450:CDS |
| AGGAACAGCAATGCCTAGTT+TGG | 0.355784 | 3_3:+61470237 | None:intergenic |
| TTGGCAAAGAACTTGGATAT+TGG | 0.356996 | 3_3:-61470449 | Msa0462450:CDS |
| TAACTGGTTTCAATGCCTTT+TGG | 0.359724 | 3_3:-61469380 | Msa0462450:CDS |
| GAACTTGGATATTGGCACTA+TGG | 0.362485 | 3_3:-61470441 | Msa0462450:CDS |
| CACTGGCTAGTCCTTGGTTC+AGG | 0.366413 | 3_3:-61469440 | Msa0462450:CDS |
| ACAAAATGCCAATAACTTGT+TGG | 0.373775 | 3_3:+61469522 | None:intergenic |
| TTTGTAGACATGGATGTATT+TGG | 0.376084 | 3_3:-61469191 | Msa0462450:intron |
| TCTCTATACCTCTTCCTAAC+AGG | 0.377690 | 3_3:+61470496 | None:intergenic |
| AAACCCCTCAATAGTCTAAC+TGG | 0.384303 | 3_3:-61469396 | Msa0462450:CDS |
| CAATACCATACCTATGCATT+TGG | 0.385390 | 3_3:+61471868 | None:intergenic |
| AAGGAGTCTGAGGCATTTGC+AGG | 0.387986 | 3_3:-61471634 | Msa0462450:CDS |
| TGAAGAGCCAACACATTTCC+AGG | 0.388080 | 3_3:+61468669 | None:intergenic |
| GCAGCTTCTCATGCTCTTAG+AGG | 0.388889 | 3_3:-61471995 | Msa0462450:CDS |
| CAAAACTATTGTCAGATATC+TGG | 0.389186 | 3_3:+61471530 | None:intergenic |
| AGAGCTGCTTATGAAGTAAT+GGG | 0.389467 | 3_3:-61470367 | Msa0462450:CDS |
| CTCTTGATGGGTAAGATCTA+TGG | 0.389674 | 3_3:+61472315 | None:intergenic |
| TTGAAGGTGGCTGTTTATCC+TGG | 0.389860 | 3_3:-61468687 | Msa0462450:intron |
| AGATTACGTTGAAGTTACTA+TGG | 0.389953 | 3_3:-61472266 | Msa0462450:CDS |
| TGTGTAACGTAGATAGATAA+TGG | 0.390942 | 3_3:-61472494 | Msa0462450:exon |
| ATTGTCCTGCAGAAAGTAAA+TGG | 0.396044 | 3_3:+61470471 | None:intergenic |
| ATGATAAATCCTGTATCATC+AGG | 0.396422 | 3_3:+61471101 | None:intergenic |
| TTTACTTTCTGCAGGACAAT+TGG | 0.402592 | 3_3:-61470468 | Msa0462450:CDS |
| GTCCTATCATAAACTTTCTC+AGG | 0.405455 | 3_3:+61472025 | None:intergenic |
| TCCCATCATCATTTATGCAT+TGG | 0.406522 | 3_3:-61469164 | Msa0462450:CDS |
| ATTAATAAGAAGACTGATGT+TGG | 0.418118 | 3_3:-61471962 | Msa0462450:CDS |
| ATGGGAACTGACGAAGTTGC+AGG | 0.418828 | 3_3:-61472475 | Msa0462450:CDS |
| TTTCACTATTTGCATGAAGA+AGG | 0.420737 | 3_3:+61469580 | None:intergenic |
| TCTTCATATGTCAAAGCCTC+AGG | 0.425557 | 3_3:-61468652 | Msa0462450:CDS |
| TCAGTGGACCTTTGAACAAA+AGG | 0.429644 | 3_3:-61472384 | Msa0462450:CDS |
| GTGATGGTGTTTCGACAAAC+AGG | 0.429985 | 3_3:+61470277 | None:intergenic |
| CCTTCACACTGGCTAGTCCT+TGG | 0.430174 | 3_3:-61469446 | Msa0462450:CDS |
| GGCACAATTGAAGGATTTCT+GGG | 0.430329 | 3_3:-61471554 | Msa0462450:CDS |
| AATTAATAAGGCACAATTGA+AGG | 0.435771 | 3_3:-61471563 | Msa0462450:CDS |
| CATATGAATACAATCCTGTT+AGG | 0.437054 | 3_3:-61470510 | Msa0462450:CDS |
| ATGCTAAGCATAAAGCTTAA+GGG | 0.446812 | 3_3:-61470535 | Msa0462450:CDS |
| TTCTTCATCATGCTCTTGAT+GGG | 0.448323 | 3_3:+61472303 | None:intergenic |
| TGATTCCATGCACAACCAAA+AGG | 0.450451 | 3_3:+61469325 | None:intergenic |
| TTCCAATGCATAAATGATGA+TGG | 0.451193 | 3_3:+61469162 | None:intergenic |
| CTTCACAATGGTTCCTTCAG+TGG | 0.452996 | 3_3:-61472400 | Msa0462450:CDS |
| CCACCATGATCATTGTTTCC+AGG | 0.453139 | 3_3:+61472199 | None:intergenic |
| TACCTCTTTAATTTCATCCT+CGG | 0.454929 | 3_3:+61471364 | None:intergenic |
| CTTAGGAACAAGACCAAACT+AGG | 0.455151 | 3_3:-61470250 | Msa0462450:CDS |
| TCGTATGAAACATGTTTCTC+AGG | 0.457006 | 3_3:-61472089 | Msa0462450:CDS |
| GAAACCAGTTAGACTATTGA+GGG | 0.471690 | 3_3:+61469392 | None:intergenic |
| AGATGCCATTTACTTTCTGC+AGG | 0.473817 | 3_3:-61470476 | Msa0462450:CDS |
| AATTCATAGTACCATTCAAA+TGG | 0.477947 | 3_3:+61468576 | None:intergenic |
| CTGCTGTCTCTCCATTTGAA+TGG | 0.482456 | 3_3:-61468587 | Msa0462450:intron |
| GATATTCTTTCAACTCATGA+TGG | 0.484475 | 3_3:-61471914 | Msa0462450:CDS |
| TGAAACCAGTTAGACTATTG+AGG | 0.485900 | 3_3:+61469391 | None:intergenic |
| GAACTAGACCCTGATGATAC+AGG | 0.487220 | 3_3:-61471110 | Msa0462450:CDS |
| TTATGCTTAGCATTTGGCTC+AGG | 0.488960 | 3_3:+61470545 | None:intergenic |
| ACACTAAGGTAGTCATCTCC+TGG | 0.492196 | 3_3:+61468436 | None:intergenic |
| CATTGTGTGTGCATGGCTAA+AGG | 0.493115 | 3_3:-61470343 | Msa0462450:CDS |
| TCTAGGAGGAGGAATATTCA+TGG | 0.493247 | 3_3:-61471592 | Msa0462450:CDS |
| AGGACAATTGGCAAAGAACT+TGG | 0.497264 | 3_3:-61470456 | Msa0462450:CDS |
| GTTTGTTTGTAGTGGCACTA+AGG | 0.499294 | 3_3:+61471183 | None:intergenic |
| AAGAGCTGCTTATGAAGTAA+TGG | 0.499997 | 3_3:-61470368 | Msa0462450:CDS |
| GACCTGAGAAAGTTTATGAT+AGG | 0.500081 | 3_3:-61472027 | Msa0462450:CDS |
| GTTTGAGAGTTTGTTTGTAG+TGG | 0.500451 | 3_3:+61471175 | None:intergenic |
| TGTTTATCCTGGAAATGTGT+TGG | 0.502255 | 3_3:-61468676 | Msa0462450:CDS |
| GAAGTTACTATGGATATTCA+AGG | 0.502431 | 3_3:-61472256 | Msa0462450:CDS |
| CTCACCTTTAATATTCTCAC+AGG | 0.502661 | 3_3:+61469106 | None:intergenic |
| CAGTGGACCTTTGAACAAAA+GGG | 0.507437 | 3_3:-61472383 | Msa0462450:CDS |
| GACTGATGTTGGATGGTTTG+AGG | 0.514384 | 3_3:-61471951 | Msa0462450:CDS |
| ATTGCTGTGGCAGTAGCAAT+TGG | 0.515038 | 3_3:-61469648 | Msa0462450:CDS |
| GTGTAACGTAGATAGATAAT+GGG | 0.517499 | 3_3:-61472493 | Msa0462450:exon |
| GTAGTCATCTCCTGGGGAAG+AGG | 0.517566 | 3_3:+61468444 | None:intergenic |
| GTCCTTGGTTCAGGAAAGGA+AGG | 0.525648 | 3_3:-61469431 | Msa0462450:CDS |
| GGAATATGCTGCTTTGATCA+TGG | 0.529070 | 3_3:-61471135 | Msa0462450:CDS |
| AATTTACCTTGTGGAAGTTG+AGG | 0.532050 | 3_3:+61470203 | None:intergenic |
| GAAACACCATCACATGGCTT+AGG | 0.537533 | 3_3:-61470267 | Msa0462450:CDS |
| AAGTTGAGGTTATCATCAAA+AGG | 0.540781 | 3_3:+61470217 | None:intergenic |
| ATAAGAAGACTGATGTTGGA+TGG | 0.542469 | 3_3:-61471958 | Msa0462450:CDS |
| AACTTTACTTGACCCGGGAA+TGG | 0.544642 | 3_3:-61469302 | Msa0462450:CDS |
| GATTCCATGCACAACCAAAA+GGG | 0.546755 | 3_3:+61469326 | None:intergenic |
| GAATCAAACTTTACTTGACC+CGG | 0.547287 | 3_3:-61469308 | Msa0462450:CDS |
| ACTCTCAAACATACAGAAGC+AGG | 0.548767 | 3_3:-61471162 | Msa0462450:CDS |
| ACATCAGAACATTAGGTGAC+TGG | 0.551511 | 3_3:-61468411 | Msa0462450:CDS |
| CACTAAGGTAGTCATCTCCT+GGG | 0.556234 | 3_3:+61468437 | None:intergenic |
| TGATGATACAGGATTTATCA+TGG | 0.557264 | 3_3:-61471099 | Msa0462450:intron |
| TCCAATGCATAAATGATGAT+GGG | 0.559424 | 3_3:+61469163 | None:intergenic |
| CTTCATATGTCAAAGCCTCA+GGG | 0.563908 | 3_3:-61468651 | Msa0462450:CDS |
| CACCGAGGATGAAATTAAAG+AGG | 0.566212 | 3_3:-61471366 | Msa0462450:intron |
| AATACAATCCTGTTAGGAAG+AGG | 0.569321 | 3_3:-61470504 | Msa0462450:CDS |
| CATCAGAGTCACGATGATTG+TGG | 0.570589 | 3_3:+61472437 | None:intergenic |
| CTAGAGATACTCTTGTTGCA+TGG | 0.571155 | 3_3:-61470601 | Msa0462450:CDS |
| TGGATATTGGCACTATGGAT+TGG | 0.572866 | 3_3:-61470436 | Msa0462450:CDS |
| ACCCTTCCTTTCCTGAACCA+AGG | 0.579096 | 3_3:+61469429 | None:intergenic |
| AAACATACAGAAGCAGGCTG+AGG | 0.584689 | 3_3:-61471156 | Msa0462450:CDS |
| TTTGTTCAAAGGTCCACTGA+AGG | 0.586863 | 3_3:+61472387 | None:intergenic |
| TCTCTCTTTGCCAAATGCAT+AGG | 0.587277 | 3_3:-61471878 | Msa0462450:intron |
| AGGAGTAACAGGGATTGTAA+TGG | 0.593262 | 3_3:-61469487 | Msa0462450:CDS |
| CTTGTTCCTAAGCCATGTGA+TGG | 0.595230 | 3_3:+61470261 | None:intergenic |
| ATGTTCTGATGTGAACACTA+AGG | 0.595832 | 3_3:+61468422 | None:intergenic |
| AGCTATTTGATGCTATGTCT+AGG | 0.598924 | 3_3:-61471609 | Msa0462450:CDS |
| GAGATGATGAGAGTACCAAA+AGG | 0.604630 | 3_3:+61469365 | None:intergenic |
| TCTCCTCGTGTAGAATGAGT+TGG | 0.606876 | 3_3:+61470577 | None:intergenic |
| CATGCAACAAGAGTATCTCT+AGG | 0.609048 | 3_3:+61470602 | None:intergenic |
| TTGATGCTATGTCTAGGAGG+AGG | 0.614888 | 3_3:-61471603 | Msa0462450:CDS |
| CTATTTGCATGAAGAAGGCG+AGG | 0.617436 | 3_3:+61469585 | None:intergenic |
| TTTCCTTATATAATATAATG+CGG | 0.618682 | 3_3:-61472574 | Msa0462450:five_prime_UTR |
| GCTAGTCCTTGGTTCAGGAA+AGG | 0.619126 | 3_3:-61469435 | Msa0462450:CDS |
| GAACTCATTGCTCTTCACAA+TGG | 0.624194 | 3_3:-61472412 | Msa0462450:CDS |
| GTTCCTGGAAACAATGATCA+TGG | 0.625065 | 3_3:-61472202 | Msa0462450:CDS |
| CTATGGATTGGTGTTATGTG+TGG | 0.625218 | 3_3:-61470424 | Msa0462450:CDS |
| AATCAAACTTTACTTGACCC+GGG | 0.633838 | 3_3:-61469307 | Msa0462450:CDS |
| CCAAGGACTAGCCAGTGTGA+AGG | 0.634073 | 3_3:+61469446 | None:intergenic |
| AGGGATGAACAAGGAGTCTG+AGG | 0.636286 | 3_3:-61471644 | Msa0462450:CDS |
| GTGGCAGTAGCAATTGGAGT+TGG | 0.641500 | 3_3:-61469642 | Msa0462450:CDS |
| TGATAAATCCTGTATCATCA+GGG | 0.643247 | 3_3:+61471102 | None:intergenic |
| GGACCTTTGAACAAAAGGGT+AGG | 0.648990 | 3_3:-61472379 | Msa0462450:CDS |
| TATTTGATGCTATGTCTAGG+AGG | 0.650797 | 3_3:-61471606 | Msa0462450:CDS |
| AATGGGGCATTGTGTGTGCA+TGG | 0.654334 | 3_3:-61470350 | Msa0462450:CDS |
| GGAAACAATGATCATGGTGG+AGG | 0.655909 | 3_3:-61472196 | Msa0462450:CDS |
| AGGGTTGATAAAGATGCGGA+TGG | 0.661165 | 3_3:-61471395 | Msa0462450:CDS |
| AATGACAATAGCCTTCACAC+TGG | 0.669825 | 3_3:-61469457 | Msa0462450:CDS |
| TTTGTCGAAACACCATCACA+TGG | 0.670086 | 3_3:-61470273 | Msa0462450:CDS |
| TCCTTGGTTCAGGAAAGGAA+GGG | 0.670918 | 3_3:-61469430 | Msa0462450:CDS |
| TCTGTTGCAGGTGATTGCTG+TGG | 0.671006 | 3_3:-61469661 | Msa0462450:intron |
| AAACCAGTTAGACTATTGAG+GGG | 0.674404 | 3_3:+61469393 | None:intergenic |
| ACGATGATTGTGGATTTCTG+TGG | 0.679034 | 3_3:+61472447 | None:intergenic |
| TGAGACACTCAAATTGAACA+TGG | 0.680186 | 3_3:-61470314 | Msa0462450:CDS |
| GAGCTGCTTATGAAGTAATG+GGG | 0.681178 | 3_3:-61470366 | Msa0462450:CDS |
| TTCATATGTCAAAGCCTCAG+GGG | 0.683932 | 3_3:-61468650 | Msa0462450:CDS |
| CAGGGGTTTAGATACAAGAG+TGG | 0.684013 | 3_3:-61468633 | Msa0462450:CDS |
| AATCATGGGAAGGAGTAACA+GGG | 0.691282 | 3_3:-61469497 | Msa0462450:CDS |
| CTCTTGTATCTAAACCCCTG+AGG | 0.699039 | 3_3:+61468636 | None:intergenic |
| TGATAACCTCAACTTCCACA+AGG | 0.713005 | 3_3:-61470209 | Msa0462450:intron |
| TCTCAGAGTCAAATTCTCAG+AGG | 0.714002 | 3_3:-61468380 | Msa0462450:CDS |
| GGACCAACTCATTCTACACG+AGG | 0.717154 | 3_3:-61470580 | Msa0462450:CDS |
| ATGTAGGGTTGATAAAGATG+CGG | 0.720955 | 3_3:-61471399 | Msa0462450:intron |
| ACTAAGGTAGTCATCTCCTG+GGG | 0.730096 | 3_3:+61468438 | None:intergenic |
| TGCGGATGGCAGAATCACCG+AGG | 0.739674 | 3_3:-61471381 | Msa0462450:CDS |
| CCTGGAAACAATGATCATGG+TGG | 0.755690 | 3_3:-61472199 | Msa0462450:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATGAAAATATTAACAAAAA+AGG | - | chr3_3:61469492-61469511 | Msa0462450:CDS | 10.0% |
| !!! | AAACTAAAAAGTAAAATTTT+AGG | + | chr3_3:61469639-61469658 | None:intergenic | 10.0% |
| !!! | CTTATTATTTTACTTTAAAA+TGG | - | chr3_3:61471122-61471141 | Msa0462450:CDS | 10.0% |
| !!! | TTCCATTAATTAATATTTTT+TGG | - | chr3_3:61472167-61472186 | Msa0462450:CDS | 10.0% |
| !! | TAAAAAATATCCATACTTAA+CGG | + | chr3_3:61469281-61469300 | None:intergenic | 15.0% |
| !!! | TTTTTATTCATATTTTTCAC+TGG | - | chr3_3:61469916-61469935 | Msa0462450:intron | 15.0% |
| !!! | TTTTATTCATATTTTTCACT+GGG | - | chr3_3:61469917-61469936 | Msa0462450:intron | 15.0% |
| !!! | TAATTTTAGCCATATTTTTT+TGG | - | chr3_3:61470295-61470314 | Msa0462450:CDS | 15.0% |
| !! | TTTATATCTATGAATGAATT+TGG | + | chr3_3:61471931-61471950 | None:intergenic | 15.0% |
| !! | AGCCAAAAAATATTAATTAA+TGG | + | chr3_3:61472172-61472191 | None:intergenic | 15.0% |
| !! | TAAAATGTTAAATGTTGTTA+TGG | - | chr3_3:61472456-61472475 | Msa0462450:CDS | 15.0% |
| !! | TAACCGCATTATATTATATA+AGG | + | chr3_3:61468380-61468399 | None:intergenic | 20.0% |
| !!! | AGTATGGATATTTTTTATGT+AGG | - | chr3_3:61469284-61469303 | Msa0462450:intron | 20.0% |
| !!! | GTATGGATATTTTTTATGTA+GGG | - | chr3_3:61469285-61469304 | Msa0462450:intron | 20.0% |
| !!! | AGGAAAGAAAGTTTTATATA+AGG | + | chr3_3:61470022-61470041 | None:intergenic | 20.0% |
| !! | AAAAAATTTATAGTAGCAAC+TGG | - | chr3_3:61470814-61470833 | Msa0462450:intron | 20.0% |
| !! | GTAATTCATTAGAAAGAATT+GGG | + | chr3_3:61470958-61470977 | None:intergenic | 20.0% |
| !! | AGTAATTCATTAGAAAGAAT+TGG | + | chr3_3:61470959-61470978 | None:intergenic | 20.0% |
| !!! | TTGAATCTTGAATTATTTTG+AGG | - | chr3_3:61471060-61471079 | Msa0462450:intron | 20.0% |
| !! | TTTGGCTAATATTCAAAAAA+TGG | - | chr3_3:61472185-61472204 | Msa0462450:CDS | 20.0% |
| !!! | CAACATTTAACATTTTAAGA+AGG | + | chr3_3:61472453-61472472 | None:intergenic | 20.0% |
| ! | ATTAATAAGAAGACTGATGT+TGG | - | chr3_3:61468986-61469005 | Msa0462450:intron | 25.0% |
| ! | TCATGGAGATTCAATTAATA+AGG | - | chr3_3:61469373-61469392 | Msa0462450:CDS | 25.0% |
| ! | AATTAATAAGGCACAATTGA+AGG | - | chr3_3:61469385-61469404 | Msa0462450:CDS | 25.0% |
| ! | AGTTTGTAAAATTTACCTTG+TGG | + | chr3_3:61470757-61470776 | None:intergenic | 25.0% |
| ! | TTAAGATTCGATTCTTGATT+TGG | - | chr3_3:61471168-61471187 | Msa0462450:CDS | 25.0% |
| ! | TAAAAAGGATAATTGAAGGA+AGG | + | chr3_3:61471691-61471710 | None:intergenic | 25.0% |
| ! | TGGATAAAAAGGATAATTGA+AGG | + | chr3_3:61471695-61471714 | None:intergenic | 25.0% |
| ! | GCTAATTCTTGTATATTCTA+AGG | - | chr3_3:61471723-61471742 | Msa0462450:intron | 25.0% |
| ! | CAAATAGGACATACAAAATT+TGG | + | chr3_3:61472244-61472263 | None:intergenic | 25.0% |
| !! | ATTTTGTATGTCCTATTTGA+AGG | - | chr3_3:61472245-61472264 | Msa0462450:CDS | 25.0% |
| ! | AATTCATAGTACCATTCAAA+TGG | + | chr3_3:61472375-61472394 | None:intergenic | 25.0% |
| ! | ATGTGCTTTTCTTTTTCTTC+AGG | + | chr3_3:61468432-61468451 | None:intergenic | 30.0% |
| TGTGTAACGTAGATAGATAA+TGG | - | chr3_3:61468454-61468473 | Msa0462450:CDS | 30.0% | |
| GTGTAACGTAGATAGATAAT+GGG | - | chr3_3:61468455-61468474 | Msa0462450:CDS | 30.0% | |
| AGATTACGTTGAAGTTACTA+TGG | - | chr3_3:61468682-61468701 | Msa0462450:CDS | 30.0% | |
| GAAGTTACTATGGATATTCA+AGG | - | chr3_3:61468692-61468711 | Msa0462450:intron | 30.0% | |
| ! | ATGGAGAAGAAAAGATCTTT+TGG | - | chr3_3:61468809-61468828 | Msa0462450:intron | 30.0% |
| !!! | TCTTTTTCGAAACAACAAGT+TGG | - | chr3_3:61468899-61468918 | Msa0462450:intron | 30.0% |
| GATATTCTTTCAACTCATGA+TGG | - | chr3_3:61469034-61469053 | Msa0462450:intron | 30.0% | |
| ! | GTCATGTTCTGAATTATTAC+TGG | - | chr3_3:61469193-61469212 | Msa0462450:intron | 30.0% |
| TGTTGAATTACCGTTAAGTA+TGG | - | chr3_3:61469268-61469287 | Msa0462450:intron | 30.0% | |
| ! | TTTTTATGTAGGGATGAACA+AGG | - | chr3_3:61469295-61469314 | Msa0462450:CDS | 30.0% |
| CAAAACTATTGTCAGATATC+TGG | + | chr3_3:61469421-61469440 | None:intergenic | 30.0% | |
| AATGCTGAACTGTATAAACT+TGG | - | chr3_3:61469525-61469544 | Msa0462450:CDS | 30.0% | |
| ACTGTATAAACTTGGAATGT+AGG | - | chr3_3:61469533-61469552 | Msa0462450:CDS | 30.0% | |
| CTGTATAAACTTGGAATGTA+GGG | - | chr3_3:61469534-61469553 | Msa0462450:CDS | 30.0% | |
| ! | TACCTCTTTAATTTCATCCT+CGG | + | chr3_3:61469587-61469606 | None:intergenic | 30.0% |
| AGGATGAAATTAAAGAGGTA+TGG | - | chr3_3:61469587-61469606 | Msa0462450:CDS | 30.0% | |
| ATGGTGACAAAATAACATAC+TGG | + | chr3_3:61469691-61469710 | None:intergenic | 30.0% | |
| ! | TATTTTGTCACCATCAGAAT+TGG | - | chr3_3:61469697-61469716 | Msa0462450:intron | 30.0% |
| TGATAAATCCTGTATCATCA+GGG | + | chr3_3:61469849-61469868 | None:intergenic | 30.0% | |
| ATGATAAATCCTGTATCATC+AGG | + | chr3_3:61469850-61469869 | None:intergenic | 30.0% | |
| TGATGATACAGGATTTATCA+TGG | - | chr3_3:61469849-61469868 | Msa0462450:intron | 30.0% | |
| GTTGAATCAATAGAGAAATG+AGG | + | chr3_3:61470105-61470124 | None:intergenic | 30.0% | |
| AGAGTTTACTACAAATATCG+AGG | + | chr3_3:61470127-61470146 | None:intergenic | 30.0% | |
| ACCAAATGGCCAAAAAAATA+TGG | + | chr3_3:61470307-61470326 | None:intergenic | 30.0% | |
| !!! | ATTTTTTTGGCCATTTGGTT+TGG | - | chr3_3:61470308-61470327 | Msa0462450:CDS | 30.0% |
| ! | TAAGCTTTATGCTTAGCATT+TGG | + | chr3_3:61470412-61470431 | None:intergenic | 30.0% |
| AATGCTAAGCATAAAGCTTA+AGG | - | chr3_3:61470412-61470431 | Msa0462450:CDS | 30.0% | |
| ATGCTAAGCATAAAGCTTAA+GGG | - | chr3_3:61470413-61470432 | Msa0462450:CDS | 30.0% | |
| CATATGAATACAATCCTGTT+AGG | - | chr3_3:61470438-61470457 | Msa0462450:CDS | 30.0% | |
| AAGTTGAGGTTATCATCAAA+AGG | + | chr3_3:61470734-61470753 | None:intergenic | 30.0% | |
| TTTAGTACCAAATCGAGATT+TGG | + | chr3_3:61470874-61470893 | None:intergenic | 30.0% | |
| AATCTTAGTGCGTATCTATT+TGG | - | chr3_3:61470912-61470931 | Msa0462450:intron | 30.0% | |
| TACAAAACTGACAGAAAAAG+TGG | + | chr3_3:61471003-61471022 | None:intergenic | 30.0% | |
| TTTGAATCTCGATCTTGATT+TGG | - | chr3_3:61471213-61471232 | Msa0462450:intron | 30.0% | |
| TTTCACTATTTGCATGAAGA+AGG | + | chr3_3:61471371-61471390 | None:intergenic | 30.0% | |
| TAGTGAAAAATACAAGCTCA+TGG | - | chr3_3:61471383-61471402 | Msa0462450:CDS | 30.0% | |
| ! | ACAAAATGCCAATAACTTGT+TGG | + | chr3_3:61471429-61471448 | None:intergenic | 30.0% |
| ! | ATTGGCATTTTGTGAAATCA+TGG | - | chr3_3:61471436-61471455 | Msa0462450:intron | 30.0% |
| ! | TTGGCATTTTGTGAAATCAT+GGG | - | chr3_3:61471437-61471456 | Msa0462450:intron | 30.0% |
| TTTGTAGACATGGATGTATT+TGG | - | chr3_3:61471757-61471776 | Msa0462450:intron | 30.0% | |
| TCCAATGCATAAATGATGAT+GGG | + | chr3_3:61471788-61471807 | None:intergenic | 30.0% | |
| TTCCAATGCATAAATGATGA+TGG | + | chr3_3:61471789-61471808 | None:intergenic | 30.0% | |
| CTACTTGAAGAAACATATGA+AGG | - | chr3_3:61471888-61471907 | Msa0462450:CDS | 30.0% | |
| TGAATGGTACTATGAATTTG+AGG | - | chr3_3:61472377-61472396 | Msa0462450:CDS | 30.0% | |
| AAATGTTGTTATGGTTTCAC+AGG | - | chr3_3:61472465-61472484 | Msa0462450:CDS | 30.0% | |
| TTCTTCATCATGCTCTTGAT+GGG | + | chr3_3:61468648-61468667 | None:intergenic | 35.0% | |
| TTTCTTCATCATGCTCTTGA+TGG | + | chr3_3:61468649-61468668 | None:intergenic | 35.0% | |
| ! | AAACGTGTTTTGCTTGGTAA+AGG | - | chr3_3:61468785-61468804 | Msa0462450:intron | 35.0% |
| ! | TGTTTTGCTTGGTAAAGGAA+TGG | - | chr3_3:61468790-61468809 | Msa0462450:intron | 35.0% |
| TCGTATGAAACATGTTTCTC+AGG | - | chr3_3:61468859-61468878 | Msa0462450:intron | 35.0% | |
| GACCTGAGAAAGTTTATGAT+AGG | - | chr3_3:61468921-61468940 | Msa0462450:intron | 35.0% | |
| GTCCTATCATAAACTTTCTC+AGG | + | chr3_3:61468926-61468945 | None:intergenic | 35.0% | |
| ATAAGAAGACTGATGTTGGA+TGG | - | chr3_3:61468990-61469009 | Msa0462450:intron | 35.0% | |
| CAATACCATACCTATGCATT+TGG | + | chr3_3:61469083-61469102 | None:intergenic | 35.0% | |
| CAAATGCATAGGTATGGTAT+TGG | - | chr3_3:61469081-61469100 | Msa0462450:intron | 35.0% | |
| TGGAGATTACTTCTGATCAA+AGG | - | chr3_3:61469101-61469120 | Msa0462450:intron | 35.0% | |
| !! | TGTTTGTGTCTGTGTTTTAG+AGG | - | chr3_3:61469241-61469260 | Msa0462450:intron | 35.0% |
| AGCTATTTGATGCTATGTCT+AGG | - | chr3_3:61469339-61469358 | Msa0462450:CDS | 35.0% | |
| TATTTGATGCTATGTCTAGG+AGG | - | chr3_3:61469342-61469361 | Msa0462450:CDS | 35.0% | |
| !! | ATGTAGGGTTGATAAAGATG+CGG | - | chr3_3:61469549-61469568 | Msa0462450:CDS | 35.0% |
| CAAGAGTAATCCAATTCTGA+TGG | + | chr3_3:61469710-61469729 | None:intergenic | 35.0% | |
| ! | GTTTGAGAGTTTGTTTGTAG+TGG | + | chr3_3:61469776-61469795 | None:intergenic | 35.0% |
| ! | ATTTTTCACTGGGTTGTTAG+TGG | - | chr3_3:61469927-61469946 | Msa0462450:intron | 35.0% |
| GTGGTACTTAAGCTGTTATT+TGG | - | chr3_3:61469946-61469965 | Msa0462450:intron | 35.0% | |
| ! | ACTCTCTGCAGATTTTTGAA+AGG | - | chr3_3:61469971-61469990 | Msa0462450:intron | 35.0% |
| !! | GCAGATTTTTGAAAGGATCT+TGG | - | chr3_3:61469978-61469997 | Msa0462450:intron | 35.0% |
| TGTAAAGATGCTCTAATTGC+AGG | + | chr3_3:61470042-61470061 | None:intergenic | 35.0% | |
| AAACGATCGATACAGAGATT+AGG | + | chr3_3:61470241-61470260 | None:intergenic | 35.0% | |
| !!! | GCCATATTTTTTTGGCCATT+TGG | - | chr3_3:61470303-61470322 | Msa0462450:CDS | 35.0% |
| TACCTGTATTCCAAACCAAA+TGG | + | chr3_3:61470321-61470340 | None:intergenic | 35.0% | |
| AATACAATCCTGTTAGGAAG+AGG | - | chr3_3:61470444-61470463 | Msa0462450:CDS | 35.0% | |
| ATTGTCCTGCAGAAAGTAAA+TGG | + | chr3_3:61470480-61470499 | None:intergenic | 35.0% | |
| TTTACTTTCTGCAGGACAAT+TGG | - | chr3_3:61470480-61470499 | Msa0462450:CDS | 35.0% | |
| TTGGCAAAGAACTTGGATAT+TGG | - | chr3_3:61470499-61470518 | Msa0462450:CDS | 35.0% | |
| TCTGTACTGCATGAATTTGT+AGG | + | chr3_3:61470558-61470577 | None:intergenic | 35.0% | |
| AAGAGCTGCTTATGAAGTAA+TGG | - | chr3_3:61470580-61470599 | Msa0462450:CDS | 35.0% | |
| AGAGCTGCTTATGAAGTAAT+GGG | - | chr3_3:61470581-61470600 | Msa0462450:CDS | 35.0% | |
| TGAGACACTCAAATTGAACA+TGG | - | chr3_3:61470634-61470653 | Msa0462450:intron | 35.0% | |
| AATTTACCTTGTGGAAGTTG+AGG | + | chr3_3:61470748-61470767 | None:intergenic | 35.0% | |
| ACAAACTGTTCATTTGTGAG+TGG | - | chr3_3:61470770-61470789 | Msa0462450:intron | 35.0% | |
| !! | CACTAAGATTCGTATCGATT+TGG | + | chr3_3:61470902-61470921 | None:intergenic | 35.0% |
| AGAAAGAATTGGGATGCAAT+AGG | + | chr3_3:61470948-61470967 | None:intergenic | 35.0% | |
| AAACTGACAGAAAAAGTGGT+TGG | + | chr3_3:61470999-61471018 | None:intergenic | 35.0% | |
| TTTGGCAATGTATCTTAACG+AGG | - | chr3_3:61471231-61471250 | Msa0462450:intron | 35.0% | |
| !!! | AAGCTCATGGAACCATTTTT+TGG | - | chr3_3:61471396-61471415 | Msa0462450:CDS | 35.0% |
| ! | GTTGGTTGCTTTCCAAAAAA+TGG | + | chr3_3:61471411-61471430 | None:intergenic | 35.0% |
| GAAAGCAACCAACAAGTTAT+TGG | - | chr3_3:61471418-61471437 | Msa0462450:intron | 35.0% | |
| ! | CATTTTGTGAAATCATGGGA+AGG | - | chr3_3:61471441-61471460 | Msa0462450:intron | 35.0% |
| AAACCAGTTAGACTATTGAG+GGG | + | chr3_3:61471558-61471577 | None:intergenic | 35.0% | |
| GAAACCAGTTAGACTATTGA+GGG | + | chr3_3:61471559-61471578 | None:intergenic | 35.0% | |
| TGAAACCAGTTAGACTATTG+AGG | + | chr3_3:61471560-61471579 | None:intergenic | 35.0% | |
| !! | TAACTGGTTTCAATGCCTTT+TGG | - | chr3_3:61471568-61471587 | Msa0462450:CDS | 35.0% |
| ! | TGTATTTGTCTATGCCCTTT+TGG | - | chr3_3:61471608-61471627 | Msa0462450:CDS | 35.0% |
| GAATCAAACTTTACTTGACC+CGG | - | chr3_3:61471640-61471659 | Msa0462450:CDS | 35.0% | |
| AATCAAACTTTACTTGACCC+GGG | - | chr3_3:61471641-61471660 | Msa0462450:CDS | 35.0% | |
| AGCTGAGAAACTGGATAAAA+AGG | + | chr3_3:61471706-61471725 | None:intergenic | 35.0% | |
| ACAAGAATTAGCTGAGAAAC+TGG | + | chr3_3:61471715-61471734 | None:intergenic | 35.0% | |
| ! | TTGTCTGTGTTTTGTAGACA+TGG | - | chr3_3:61471747-61471766 | Msa0462450:intron | 35.0% |
| TCCCATCATCATTTATGCAT+TGG | - | chr3_3:61471784-61471803 | Msa0462450:intron | 35.0% | |
| CAAGCCTGTGAGAATATTAA+AGG | - | chr3_3:61471838-61471857 | Msa0462450:intron | 35.0% | |
| CTCACCTTTAATATTCTCAC+AGG | + | chr3_3:61471845-61471864 | None:intergenic | 35.0% | |
| ! | GATCTGTCTATTGAAAGCAT+AGG | + | chr3_3:61471971-61471990 | None:intergenic | 35.0% |
| TGCTTTCAATAGACAGATCA+AGG | - | chr3_3:61471972-61471991 | Msa0462450:CDS | 35.0% | |
| CAGATCAAGGATTGTTTATC+TGG | - | chr3_3:61471985-61472004 | Msa0462450:CDS | 35.0% | |
| ! | CTTTTCAAAGTAACCCACTT+GGG | + | chr3_3:61472140-61472159 | None:intergenic | 35.0% |
| ! | TCTTTTCAAAGTAACCCACT+TGG | + | chr3_3:61472141-61472160 | None:intergenic | 35.0% |
| TTGTATGTCCTATTTGAAGG+TGG | - | chr3_3:61472248-61472267 | Msa0462450:CDS | 35.0% | |
| ATAAACAGCCACCTTCAAAT+AGG | + | chr3_3:61472259-61472278 | None:intergenic | 35.0% | |
| TGTTTATCCTGGAAATGTGT+TGG | - | chr3_3:61472272-61472291 | Msa0462450:CDS | 35.0% | |
| CATGCAGAGACTACTAATTA+TGG | + | chr3_3:61472405-61472424 | None:intergenic | 35.0% | |
| ATGTTCTGATGTGAACACTA+AGG | + | chr3_3:61472529-61472548 | None:intergenic | 35.0% | |
| AGTGTTCACATCAGAACATT+AGG | - | chr3_3:61472530-61472549 | Msa0462450:five_prime_UTR | 35.0% | |
| ACGATGATTGTGGATTTCTG+TGG | + | chr3_3:61468504-61468523 | None:intergenic | 40.0% | |
| GAACTCATTGCTCTTCACAA+TGG | - | chr3_3:61468536-61468555 | Msa0462450:intron | 40.0% | |
| TTTGTTCAAAGGTCCACTGA+AGG | + | chr3_3:61468564-61468583 | None:intergenic | 40.0% | |
| TCAGTGGACCTTTGAACAAA+AGG | - | chr3_3:61468564-61468583 | Msa0462450:intron | 40.0% | |
| CAGTGGACCTTTGAACAAAA+GGG | - | chr3_3:61468565-61468584 | Msa0462450:intron | 40.0% | |
| ! | CTTCCTACCCTTTTGTTCAA+AGG | + | chr3_3:61468575-61468594 | None:intergenic | 40.0% |
| ! | CTCTTGATGGGTAAGATCTA+TGG | + | chr3_3:61468636-61468655 | None:intergenic | 40.0% |
| CACAGTGTTAAAACTGTTCC+TGG | - | chr3_3:61468731-61468750 | Msa0462450:intron | 40.0% | |
| GTTCCTGGAAACAATGATCA+TGG | - | chr3_3:61468746-61468765 | Msa0462450:intron | 40.0% | |
| ! | GATGAGAAACGTGTTTTGCT+TGG | - | chr3_3:61468779-61468798 | Msa0462450:intron | 40.0% |
| TCTCTCTTTGCCAAATGCAT+AGG | - | chr3_3:61469070-61469089 | Msa0462450:intron | 40.0% | |
| CTTTGCCAAATGCATAGGTA+TGG | - | chr3_3:61469075-61469094 | Msa0462450:intron | 40.0% | |
| ! | CTTCTGATCAAAGGTGTGTT+CGG | - | chr3_3:61469110-61469129 | Msa0462450:intron | 40.0% |
| ! | TTGACACGAGTGTCTGAAAT+CGG | - | chr3_3:61469136-61469155 | Msa0462450:CDS | 40.0% |
| TCTAGGAGGAGGAATATTCA+TGG | - | chr3_3:61469356-61469375 | Msa0462450:CDS | 40.0% | |
| AGGCACAATTGAAGGATTTC+TGG | - | chr3_3:61469393-61469412 | Msa0462450:CDS | 40.0% | |
| GGCACAATTGAAGGATTTCT+GGG | - | chr3_3:61469394-61469413 | Msa0462450:CDS | 40.0% | |
| CACCGAGGATGAAATTAAAG+AGG | - | chr3_3:61469582-61469601 | Msa0462450:CDS | 40.0% | |
| GTTTGTTTGTAGTGGCACTA+AGG | + | chr3_3:61469768-61469787 | None:intergenic | 40.0% | |
| ACTCTCAAACATACAGAAGC+AGG | - | chr3_3:61469786-61469805 | Msa0462450:intron | 40.0% | |
| !! | GGAATATGCTGCTTTGATCA+TGG | - | chr3_3:61469813-61469832 | Msa0462450:intron | 40.0% |
| ! | CTTGATGATCTCCAGCATTA+AGG | - | chr3_3:61470145-61470164 | Msa0462450:intron | 40.0% |
| TAGCAACACAACCTTAATGC+TGG | + | chr3_3:61470159-61470178 | None:intergenic | 40.0% | |
| ! | CTGTATCGATCGTTTATCTC+TGG | - | chr3_3:61470246-61470265 | Msa0462450:CDS | 40.0% |
| !! | CATGCAACAAGAGTATCTCT+AGG | + | chr3_3:61470349-61470368 | None:intergenic | 40.0% |
| CTAGAGATACTCTTGTTGCA+TGG | - | chr3_3:61470347-61470366 | Msa0462450:CDS | 40.0% | |
| ! | TTATGCTTAGCATTTGGCTC+AGG | + | chr3_3:61470406-61470425 | None:intergenic | 40.0% |
| TCTCTATACCTCTTCCTAAC+AGG | + | chr3_3:61470455-61470474 | None:intergenic | 40.0% | |
| ! | AGATGCCATTTACTTTCTGC+AGG | - | chr3_3:61470472-61470491 | Msa0462450:CDS | 40.0% |
| AGGACAATTGGCAAAGAACT+TGG | - | chr3_3:61470492-61470511 | Msa0462450:CDS | 40.0% | |
| GAACTTGGATATTGGCACTA+TGG | - | chr3_3:61470507-61470526 | Msa0462450:CDS | 40.0% | |
| TGGATATTGGCACTATGGAT+TGG | - | chr3_3:61470512-61470531 | Msa0462450:CDS | 40.0% | |
| !! | CTATGGATTGGTGTTATGTG+TGG | - | chr3_3:61470524-61470543 | Msa0462450:CDS | 40.0% |
| GAGCTGCTTATGAAGTAATG+GGG | - | chr3_3:61470582-61470601 | Msa0462450:CDS | 40.0% | |
| TTTGTCGAAACACCATCACA+TGG | - | chr3_3:61470675-61470694 | Msa0462450:intron | 40.0% | |
| CTTAGGAACAAGACCAAACT+AGG | - | chr3_3:61470698-61470717 | Msa0462450:intron | 40.0% | |
| TGATAACCTCAACTTCCACA+AGG | - | chr3_3:61470739-61470758 | Msa0462450:intron | 40.0% | |
| TTATAGTAGCAACTGGTGCA+TGG | - | chr3_3:61470821-61470840 | Msa0462450:intron | 40.0% | |
| ! | TGGTTGGTTGCACAAAGTTT+AGG | + | chr3_3:61470983-61471002 | None:intergenic | 40.0% |
| CGAGATTCAAATCTTGAGTC+AGG | + | chr3_3:61471204-61471223 | None:intergenic | 40.0% | |
| AACAGACTCTCGTCATTTCA+TGG | + | chr3_3:61471273-61471292 | None:intergenic | 40.0% | |
| AAATCATGGGAAGGAGTAAC+AGG | - | chr3_3:61471450-61471469 | Msa0462450:intron | 40.0% | |
| AATCATGGGAAGGAGTAACA+GGG | - | chr3_3:61471451-61471470 | Msa0462450:intron | 40.0% | |
| AGGAGTAACAGGGATTGTAA+TGG | - | chr3_3:61471461-61471480 | Msa0462450:intron | 40.0% | |
| AATGACAATAGCCTTCACAC+TGG | - | chr3_3:61471491-61471510 | Msa0462450:intron | 40.0% | |
| GTTAGACTATTGAGGGGTTT+AGG | + | chr3_3:61471552-61471571 | None:intergenic | 40.0% | |
| AAACCCCTCAATAGTCTAAC+TGG | - | chr3_3:61471552-61471571 | Msa0462450:CDS | 40.0% | |
| !! | GAGATGATGAGAGTACCAAA+AGG | + | chr3_3:61471586-61471605 | None:intergenic | 40.0% |
| GATTCCATGCACAACCAAAA+GGG | + | chr3_3:61471625-61471644 | None:intergenic | 40.0% | |
| TGATTCCATGCACAACCAAA+AGG | + | chr3_3:61471626-61471645 | None:intergenic | 40.0% | |
| TCTTCATATGTCAAAGCCTC+AGG | - | chr3_3:61472296-61472315 | Msa0462450:CDS | 40.0% | |
| CTTCATATGTCAAAGCCTCA+GGG | - | chr3_3:61472297-61472316 | Msa0462450:CDS | 40.0% | |
| TTCATATGTCAAAGCCTCAG+GGG | - | chr3_3:61472298-61472317 | Msa0462450:CDS | 40.0% | |
| ACATCAGAACATTAGGTGAC+TGG | - | chr3_3:61472537-61472556 | Msa0462450:five_prime_UTR | 40.0% | |
| !! | GAATTTGACTCTGAGACTTC+TGG | + | chr3_3:61472564-61472583 | None:intergenic | 40.0% |
| TCTCAGAGTCAAATTCTCAG+AGG | - | chr3_3:61472568-61472587 | Msa0462450:five_prime_UTR | 40.0% | |
| CATCAGAGTCACGATGATTG+TGG | + | chr3_3:61468514-61468533 | None:intergenic | 45.0% | |
| CTTCACAATGGTTCCTTCAG+TGG | - | chr3_3:61468548-61468567 | Msa0462450:intron | 45.0% | |
| GGACCTTTGAACAAAAGGGT+AGG | - | chr3_3:61468569-61468588 | Msa0462450:intron | 45.0% | |
| CCACCATGATCATTGTTTCC+AGG | + | chr3_3:61468752-61468771 | None:intergenic | 45.0% | |
| CCTGGAAACAATGATCATGG+TGG | - | chr3_3:61468749-61468768 | Msa0462450:intron | 45.0% | |
| GGAAACAATGATCATGGTGG+AGG | - | chr3_3:61468752-61468771 | Msa0462450:intron | 45.0% | |
| GACTGATGTTGGATGGTTTG+AGG | - | chr3_3:61468997-61469016 | Msa0462450:intron | 45.0% | |
| TTGATGTGTCGTGTCGTGTT+TGG | - | chr3_3:61469218-61469237 | Msa0462450:intron | 45.0% | |
| TTGATGCTATGTCTAGGAGG+AGG | - | chr3_3:61469345-61469364 | Msa0462450:CDS | 45.0% | |
| !! | AGGGTTGATAAAGATGCGGA+TGG | - | chr3_3:61469553-61469572 | Msa0462450:CDS | 45.0% |
| AAACATACAGAAGCAGGCTG+AGG | - | chr3_3:61469792-61469811 | Msa0462450:intron | 45.0% | |
| GAACTAGACCCTGATGATAC+AGG | - | chr3_3:61469838-61469857 | Msa0462450:intron | 45.0% | |
| !! | GGCCATTTGGTTTGGAATAC+AGG | - | chr3_3:61470316-61470335 | Msa0462450:CDS | 45.0% |
| TCTCCTCGTGTAGAATGAGT+TGG | + | chr3_3:61470374-61470393 | None:intergenic | 45.0% | |
| CATTGTGTGTGCATGGCTAA+AGG | - | chr3_3:61470605-61470624 | Msa0462450:CDS | 45.0% | |
| ! | GTGATGGTGTTTCGACAAAC+AGG | + | chr3_3:61470674-61470693 | None:intergenic | 45.0% |
| GAAACACCATCACATGGCTT+AGG | - | chr3_3:61470681-61470700 | Msa0462450:intron | 45.0% | |
| CTTGTTCCTAAGCCATGTGA+TGG | + | chr3_3:61470690-61470709 | None:intergenic | 45.0% | |
| AGGAACAGCAATGCCTAGTT+TGG | + | chr3_3:61470714-61470733 | None:intergenic | 45.0% | |
| ATGCGAGCCAAATCTCGATT+TGG | - | chr3_3:61470864-61470883 | Msa0462450:intron | 45.0% | |
| AAATGACGAGAGTCTGTTGC+AGG | - | chr3_3:61471275-61471294 | Msa0462450:intron | 45.0% | |
| ATTGCTGTGGCAGTAGCAAT+TGG | - | chr3_3:61471300-61471319 | Msa0462450:intron | 45.0% | |
| CTATTTGCATGAAGAAGGCG+AGG | + | chr3_3:61471366-61471385 | None:intergenic | 45.0% | |
| TCCTTGGTTCAGGAAAGGAA+GGG | - | chr3_3:61471518-61471537 | Msa0462450:CDS | 45.0% | |
| !! | TATGCCCTTTTGGTTGTGCA+TGG | - | chr3_3:61471618-61471637 | Msa0462450:CDS | 45.0% |
| AACTTTACTTGACCCGGGAA+TGG | - | chr3_3:61471646-61471665 | Msa0462450:intron | 45.0% | |
| !!! | CGTTTTTTTGTGCCATTCCC+GGG | + | chr3_3:61471661-61471680 | None:intergenic | 45.0% |
| !!! | CCGTTTTTTTGTGCCATTCC+CGG | + | chr3_3:61471662-61471681 | None:intergenic | 45.0% |
| CCGGGAATGGCACAAAAAAA+CGG | - | chr3_3:61471659-61471678 | Msa0462450:intron | 45.0% | |
| TCAAAGTAACCCACTTGGGT+TGG | + | chr3_3:61472136-61472155 | None:intergenic | 45.0% | |
| TTGAAGGTGGCTGTTTATCC+TGG | - | chr3_3:61472261-61472280 | Msa0462450:CDS | 45.0% | |
| TGAAGAGCCAACACATTTCC+AGG | + | chr3_3:61472282-61472301 | None:intergenic | 45.0% | |
| CTCTTGTATCTAAACCCCTG+AGG | + | chr3_3:61472315-61472334 | None:intergenic | 45.0% | |
| CAGGGGTTTAGATACAAGAG+TGG | - | chr3_3:61472315-61472334 | Msa0462450:CDS | 45.0% | |
| CTGCTGTCTCTCCATTTGAA+TGG | - | chr3_3:61472361-61472380 | Msa0462450:CDS | 45.0% | |
| GGGGAAGAGGTTATGGAAAA+TGG | + | chr3_3:61472494-61472513 | None:intergenic | 45.0% | |
| ! | TTTTCCATAACCTCTTCCCC+AGG | - | chr3_3:61472494-61472513 | Msa0462450:exon | 45.0% |
| ACTAAGGTAGTCATCTCCTG+GGG | + | chr3_3:61472513-61472532 | None:intergenic | 45.0% | |
| CACTAAGGTAGTCATCTCCT+GGG | + | chr3_3:61472514-61472533 | None:intergenic | 45.0% | |
| ACACTAAGGTAGTCATCTCC+TGG | + | chr3_3:61472515-61472534 | None:intergenic | 45.0% | |
| ATGGGAACTGACGAAGTTGC+AGG | - | chr3_3:61468473-61468492 | Msa0462450:intron | 50.0% | |
| GCAGCTTCTCATGCTCTTAG+AGG | - | chr3_3:61468953-61468972 | Msa0462450:intron | 50.0% | |
| AGGGATGAACAAGGAGTCTG+AGG | - | chr3_3:61469304-61469323 | Msa0462450:CDS | 50.0% | |
| ! | AAGGAGTCTGAGGCATTTGC+AGG | - | chr3_3:61469314-61469333 | Msa0462450:CDS | 50.0% |
| GGACCAACTCATTCTACACG+AGG | - | chr3_3:61470368-61470387 | Msa0462450:CDS | 50.0% | |
| !! | AATGGGGCATTGTGTGTGCA+TGG | - | chr3_3:61470598-61470617 | Msa0462450:CDS | 50.0% |
| TCTGTTGCAGGTGATTGCTG+TGG | - | chr3_3:61471287-61471306 | Msa0462450:intron | 50.0% | |
| GTGGCAGTAGCAATTGGAGT+TGG | - | chr3_3:61471306-61471325 | Msa0462450:intron | 50.0% | |
| GCTAGTCCTTGGTTCAGGAA+AGG | - | chr3_3:61471513-61471532 | Msa0462450:CDS | 50.0% | |
| GTCCTTGGTTCAGGAAAGGA+AGG | - | chr3_3:61471517-61471536 | Msa0462450:CDS | 50.0% | |
| ACCCTTCCTTTCCTGAACCA+AGG | + | chr3_3:61471522-61471541 | None:intergenic | 50.0% | |
| TAGCCCACCTAACTTGACAC+CGG | - | chr3_3:61472046-61472065 | Msa0462450:CDS | 50.0% | |
| ! | ATTCCCTCCGGTGTCAAGTT+AGG | + | chr3_3:61472056-61472075 | None:intergenic | 50.0% |
| ATCTCCTGGGGAAGAGGTTA+TGG | + | chr3_3:61472501-61472520 | None:intergenic | 50.0% | |
| !! | CCAAGGACTAGCCAGTGTGA+AGG | + | chr3_3:61471505-61471524 | None:intergenic | 55.0% |
| ! | CCTTCACACTGGCTAGTCCT+TGG | - | chr3_3:61471502-61471521 | Msa0462450:CDS | 55.0% |
| ! | CACTGGCTAGTCCTTGGTTC+AGG | - | chr3_3:61471508-61471527 | Msa0462450:CDS | 55.0% |
| ! | CCTCCGGTGTCAAGTTAGGT+GGG | + | chr3_3:61472052-61472071 | None:intergenic | 55.0% |
| CCACCTAACTTGACACCGGA+GGG | - | chr3_3:61472050-61472069 | Msa0462450:CDS | 55.0% | |
| GTCTCAGGTTCGATTCCCTC+CGG | + | chr3_3:61472068-61472087 | None:intergenic | 55.0% | |
| GAATCGAACCTGAGACCTCG+AGG | - | chr3_3:61472072-61472091 | Msa0462450:CDS | 55.0% | |
| !! | GTGGTATTGGCTTGGGACCT+GGG | + | chr3_3:61472109-61472128 | None:intergenic | 55.0% |
| !! | AGTGGTATTGGCTTGGGACC+TGG | + | chr3_3:61472110-61472129 | None:intergenic | 55.0% |
| AGGTCCCAAGCCAATACCAC+TGG | - | chr3_3:61472109-61472128 | Msa0462450:CDS | 55.0% | |
| GGTCCCAAGCCAATACCACT+GGG | - | chr3_3:61472110-61472129 | Msa0462450:CDS | 55.0% | |
| !! | TGGCCCAGTGGTATTGGCTT+GGG | + | chr3_3:61472116-61472135 | None:intergenic | 55.0% |
| !! | TTGGCCCAGTGGTATTGGCT+TGG | + | chr3_3:61472117-61472136 | None:intergenic | 55.0% |
| !! | TTGGGTTGGCCCAGTGGTAT+TGG | + | chr3_3:61472122-61472141 | None:intergenic | 55.0% |
| GTAGTCATCTCCTGGGGAAG+AGG | + | chr3_3:61472507-61472526 | None:intergenic | 55.0% | |
| TGCGGATGGCAGAATCACCG+AGG | - | chr3_3:61469567-61469586 | Msa0462450:CDS | 60.0% | |
| CCCACCTAACTTGACACCGG+AGG | - | chr3_3:61472049-61472068 | Msa0462450:CDS | 60.0% | |
| ! | CCCTCCGGTGTCAAGTTAGG+TGG | + | chr3_3:61472053-61472072 | None:intergenic | 60.0% |
| TCGAACCTGAGACCTCGAGG+AGG | - | chr3_3:61472075-61472094 | Msa0462450:CDS | 60.0% | |
| TACCACTGGGCCAACCCAAG+TGG | - | chr3_3:61472123-61472142 | Msa0462450:CDS | 60.0% | |
| ACCACTGGGCCAACCCAAGT+GGG | - | chr3_3:61472124-61472143 | Msa0462450:CDS | 60.0% | |
| GTGCTCCTCCTCGAGGTCTC+AGG | + | chr3_3:61472083-61472102 | None:intergenic | 65.0% | |
| ! | TGGGAGTGTGCTCCTCCTCG+AGG | + | chr3_3:61472090-61472109 | None:intergenic | 65.0% |
| ! | TCGAGGAGGAGCACACTCCC+AGG | - | chr3_3:61472089-61472108 | Msa0462450:CDS | 65.0% |
| !! | ACCCACTTGGGTTGGCCCAG+TGG | + | chr3_3:61472128-61472147 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 61468375 | 61472595 | 61468375 | ID=Msa0462450;Name=Msa0462450 |
| chr3_3 | mRNA | 61468375 | 61472595 | 61468375 | ID=Msa0462450-mRNA-1;Parent=Msa0462450;Name=Msa0462450-mRNA-1;_AED=0.39;_eAED=0.39;_QI=98|1|0.88|1|1|1|9|0|690 |
| chr3_3 | exon | 61468375 | 61468483 | 61468375 | ID=Msa0462450-mRNA-1:exon:13084;Parent=Msa0462450-mRNA-1 |
| chr3_3 | exon | 61468588 | 61468703 | 61468588 | ID=Msa0462450-mRNA-1:exon:13083;Parent=Msa0462450-mRNA-1 |
| chr3_3 | exon | 61469111 | 61469206 | 61469111 | ID=Msa0462450-mRNA-1:exon:13082;Parent=Msa0462450-mRNA-1 |
| chr3_3 | exon | 61469290 | 61469673 | 61469290 | ID=Msa0462450-mRNA-1:exon:13081;Parent=Msa0462450-mRNA-1 |
| chr3_3 | exon | 61470210 | 61470632 | 61470210 | ID=Msa0462450-mRNA-1:exon:13080;Parent=Msa0462450-mRNA-1 |
| chr3_3 | exon | 61471100 | 61471213 | 61471100 | ID=Msa0462450-mRNA-1:exon:13079;Parent=Msa0462450-mRNA-1 |
| chr3_3 | exon | 61471367 | 61471415 | 61471367 | ID=Msa0462450-mRNA-1:exon:13078;Parent=Msa0462450-mRNA-1 |
| chr3_3 | exon | 61471502 | 61471664 | 61471502 | ID=Msa0462450-mRNA-1:exon:13077;Parent=Msa0462450-mRNA-1 |
| chr3_3 | exon | 61471879 | 61472595 | 61471879 | ID=Msa0462450-mRNA-1:exon:13076;Parent=Msa0462450-mRNA-1 |
| chr3_3 | five_prime_UTR | 61472498 | 61472595 | 61472498 | ID=Msa0462450-mRNA-1:five_prime_utr;Parent=Msa0462450-mRNA-1 |
| chr3_3 | CDS | 61471879 | 61472497 | 61471879 | ID=Msa0462450-mRNA-1:cds;Parent=Msa0462450-mRNA-1 |
| chr3_3 | CDS | 61471502 | 61471664 | 61471502 | ID=Msa0462450-mRNA-1:cds;Parent=Msa0462450-mRNA-1 |
| chr3_3 | CDS | 61471367 | 61471415 | 61471367 | ID=Msa0462450-mRNA-1:cds;Parent=Msa0462450-mRNA-1 |
| chr3_3 | CDS | 61471100 | 61471213 | 61471100 | ID=Msa0462450-mRNA-1:cds;Parent=Msa0462450-mRNA-1 |
| chr3_3 | CDS | 61470210 | 61470632 | 61470210 | ID=Msa0462450-mRNA-1:cds;Parent=Msa0462450-mRNA-1 |
| chr3_3 | CDS | 61469290 | 61469673 | 61469290 | ID=Msa0462450-mRNA-1:cds;Parent=Msa0462450-mRNA-1 |
| chr3_3 | CDS | 61469111 | 61469206 | 61469111 | ID=Msa0462450-mRNA-1:cds;Parent=Msa0462450-mRNA-1 |
| chr3_3 | CDS | 61468588 | 61468703 | 61468588 | ID=Msa0462450-mRNA-1:cds;Parent=Msa0462450-mRNA-1 |
| chr3_3 | CDS | 61468375 | 61468483 | 61468375 | ID=Msa0462450-mRNA-1:cds;Parent=Msa0462450-mRNA-1 |
| Gene Sequence |
| Protein sequence |
