AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0487720

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0487720 MtrunA17_Chr3g0077481 97.227 541 14 1 1 541 1 540 0.0 1066
Msa0487720 MtrunA17_Chr2g0276971 41.924 551 259 19 9 541 4 511 5.93e-100 311
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0487720 AT1G33980.1 49.444 540 202 14 9 541 7 482 8.12e-143 421
Msa0487720 AT1G33980.2 49.077 542 203 15 9 541 7 484 2.60e-140 414

Find 177 sgRNAs with CRISPR-Local

Find 654 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGATCCCCGTCTGGTATTAC+TGG 0.197368 3_4:-6848033 None:intergenic
ACCCGAGATGCTTATCATTT+TGG 0.217745 3_4:-6854906 None:intergenic
GAGTTTGCGGAGTTCTTTAA+TGG 0.236801 3_4:+6845571 Msa0487720:CDS
TTCCACCGGCTTCACGCTTT+TGG 0.251325 3_4:-6852328 None:intergenic
AACCAACGGAACCCACATTT+AGG 0.254362 3_4:-6854653 None:intergenic
ACATCATCCGCGTCCAATTC+AGG 0.265286 3_4:+6854191 Msa0487720:three_prime_UTR
GGTAAAAGAAAATGCTTATT+CGG 0.273466 3_4:+6852886 Msa0487720:CDS
ATTCTGAAGGGGAATCTAAA+AGG 0.281820 3_4:+6852525 Msa0487720:CDS
TCTTCTGAATCAAGTATAAA+AGG 0.294483 3_4:+6849819 Msa0487720:CDS
CTTGCCTTGCATAGCAGCTC+TGG 0.315043 3_4:-6848003 None:intergenic
AGGCGTCCACCTCGTCCTTT+TGG 0.319628 3_4:+6852449 Msa0487720:CDS
GGAATTTAGCTGTATAGTTT+TGG 0.320400 3_4:+6854530 Msa0487720:three_prime_UTR
GTCATACCTTCAACTGATTC+AGG 0.322351 3_4:-6852734 None:intergenic
TCTGTATGCAGAAACAAGTT+TGG 0.325968 3_4:+6853274 Msa0487720:intron
TGAATCATTTAGTAGGTGTT+TGG 0.336565 3_4:+6854570 Msa0487720:three_prime_UTR
GCTGCTATGCAAGGCAAGCC+TGG 0.337012 3_4:+6848008 Msa0487720:CDS
CAGGCCTGATCGTGGTGTTT+GGG 0.338312 3_4:+6852631 Msa0487720:CDS
CCATCATCCTTCACTATATA+GGG 0.349986 3_4:-6853124 None:intergenic
ACAGGCCTGATCGTGGTGTT+TGG 0.351241 3_4:+6852630 Msa0487720:CDS
CAGCACAACACAATACAAAC+TGG 0.368048 3_4:-6844601 None:intergenic
GAAGAAGAACCTGGTGTTGC+CGG 0.371559 3_4:-6844832 None:intergenic
GGCATTGAAGGTTCCGTCTC+TGG 0.374822 3_4:+6851825 Msa0487720:CDS
ACCATCATCCTTCACTATAT+AGG 0.376532 3_4:-6853125 None:intergenic
AGGGGAATCTAAAAGGGATT+TGG 0.379049 3_4:+6852532 Msa0487720:CDS
TTTCGAAGTTGGTTTCATTT+CGG 0.384883 3_4:+6844661 Msa0487720:five_prime_UTR
ACGGGGATCCGAAAAGAAAA+AGG 0.391911 3_4:+6848046 Msa0487720:CDS
AGGCTCATGTCGACCTGAAT+TGG 0.394710 3_4:-6854204 None:intergenic
AAAATGCTTATTCGGGAAAC+AGG 0.394937 3_4:+6852894 Msa0487720:CDS
GAAGAAGATGAAGGCGCGTT+CGG 0.395141 3_4:+6844692 Msa0487720:exon
GACATTGTTAACCATGTTGA+TGG 0.397392 3_4:+6854445 Msa0487720:three_prime_UTR
AGAAGAATGGTCCTCACGCC+TGG 0.398858 3_4:-6849802 None:intergenic
TGGGTTCAGAAATCATCTTC+AGG 0.399182 3_4:+6853294 Msa0487720:CDS
CTGTATGCAGAAACAAGTTT+GGG 0.400640 3_4:+6853275 Msa0487720:intron
ATTGAGCTAGGGATCTGTTT+AGG 0.401238 3_4:+6854168 Msa0487720:three_prime_UTR
CGTGAAGGGACTATATATAA+AGG 0.410366 3_4:+6846301 Msa0487720:CDS
TTGCATTCCTTCAATTCTAC+AGG 0.415839 3_4:-6854379 None:intergenic
GATGAAGGCGCGTTCGGAAA+AGG 0.416038 3_4:+6844698 Msa0487720:exon
GACAGAGCCTGTAGAATTGA+AGG 0.416637 3_4:+6854372 Msa0487720:three_prime_UTR
TTGAGGAACTCGAGATAGTC+TGG 0.416889 3_4:-6846443 None:intergenic
TCAGGCTCTTAAAATATTTG+TGG 0.419901 3_4:+6853312 Msa0487720:exon
AGGCTCTGTCAGGCAACAAC+TGG 0.421787 3_4:-6854359 None:intergenic
AGAGAGAACAATTTCGAAGT+TGG 0.423335 3_4:+6844650 Msa0487720:five_prime_UTR
GTAAAAGAAAATGCTTATTC+GGG 0.425492 3_4:+6852887 Msa0487720:CDS
TCCAAAGCCGAGTACCAAAA+AGG 0.427328 3_4:+6846273 Msa0487720:CDS
TCCGAGTGCAGAAATACAAT+TGG 0.428949 3_4:+6846493 Msa0487720:CDS
CAAATCTTAACTTCTGAGAA+TGG 0.431636 3_4:+6852425 Msa0487720:CDS
GATCCCCGTCTGGTATTACT+GGG 0.431988 3_4:-6848032 None:intergenic
ACCAACGGAACCCACATTTA+GGG 0.445532 3_4:-6854652 None:intergenic
AAACTTTCAAAGAAAGGTGT+TGG 0.453145 3_4:+6853169 Msa0487720:CDS
ATGAAGGCGCGTTCGGAAAA+GGG 0.454196 3_4:+6844699 Msa0487720:CDS
ACTATATATGTCAAATGAAC+CGG 0.457668 3_4:-6854703 None:intergenic
CTTTCAGGCCACTGAAGGTA+TGG 0.458031 3_4:+6852247 Msa0487720:intron
CATCTTGTGTCAGGTTTCAT+CGG 0.460552 3_4:+6847956 Msa0487720:intron
TATACAGTGCATGGCATTGA+AGG 0.462061 3_4:+6851813 Msa0487720:CDS
GAGGCTTTGAAATGAGTTTG+AGG 0.464705 3_4:-6846460 None:intergenic
AACTTTCAAAGAAAGGTGTT+GGG 0.465614 3_4:+6853170 Msa0487720:CDS
CAAATTATTACAAAATGATA+AGG 0.467235 3_4:+6854869 Msa0487720:three_prime_UTR
TTATACTTGATTCAGAAGAA+TGG 0.467658 3_4:-6849815 None:intergenic
GTGTTGAATGAGATCGGATT+CGG 0.469220 3_4:-6844763 None:intergenic
ATTACTAGAATGTGAAGAAT+CGG 0.475433 3_4:-6852669 None:intergenic
CTGTTTAACCATACCTTCAG+TGG 0.475898 3_4:-6852255 None:intergenic
CTAAATGATTCACTTTCCTA+TGG 0.476224 3_4:-6854559 None:intergenic
CGTCTGGTATTACTGGGGCC+AGG 0.479425 3_4:-6848026 None:intergenic
ACCCTAAATGTGGGTTCCGT+TGG 0.481140 3_4:+6854651 Msa0487720:three_prime_UTR
GTTTCTCTTCTCGCTATCAC+TGG 0.482546 3_4:+6844796 Msa0487720:CDS
CATTCCTGCTACATTGAGCT+AGG 0.482575 3_4:+6854156 Msa0487720:three_prime_UTR
TCTGACGTATATATGCCATC+AGG 0.484252 3_4:-6846719 None:intergenic
AGAAATACAATTGGAAAGAA+AGG 0.484703 3_4:+6846502 Msa0487720:CDS
CTTTATATATAGTCCCTTCA+CGG 0.485953 3_4:-6846300 None:intergenic
GGTGAATTCTCAACTTCTGC+AGG 0.489502 3_4:+6852920 Msa0487720:CDS
GCCATCAGGGGTGTGACAAT+AGG 0.490885 3_4:-6846705 None:intergenic
TTCTGAAGGGGAATCTAAAA+GGG 0.490928 3_4:+6852526 Msa0487720:CDS
GCAAACTCGAAAACATCATC+AGG 0.492867 3_4:-6845556 None:intergenic
ATCGATGTGTTGAATGAGAT+CGG 0.494137 3_4:-6844769 None:intergenic
AGGAAAGTGAATCATTTAGT+AGG 0.496563 3_4:+6854563 Msa0487720:three_prime_UTR
GATCCCTAGCTCAATGTAGC+AGG 0.504919 3_4:-6854160 None:intergenic
GAAAAGACACGAACCATACA+AGG 0.506281 3_4:-6854475 None:intergenic
ACAATGTCAAGAATGCTAAT+CGG 0.510501 3_4:+6849742 Msa0487720:CDS
TCATATCCTGAATCAGTTGA+AGG 0.510630 3_4:+6852728 Msa0487720:CDS
CAGAACCAAAAGCGTGAAGC+CGG 0.512531 3_4:+6852323 Msa0487720:CDS
TCAATTCTACAGGCTCTGTC+AGG 0.514091 3_4:-6854369 None:intergenic
AAGCCGGTGGAAGATTGATC+AGG 0.514442 3_4:+6852339 Msa0487720:CDS
GGTGCCCAAACACCACGATC+AGG 0.517553 3_4:-6852635 None:intergenic
TCGAGTAGGGTTTGTATGAA+AGG 0.517799 3_4:+6854725 Msa0487720:three_prime_UTR
TTGACATATATAGTCGAGTA+GGG 0.517838 3_4:+6854712 Msa0487720:three_prime_UTR
GAAGAATGGTCCTCACGCCT+GGG 0.520144 3_4:-6849801 None:intergenic
TCCAATTGTATTTCTGCACT+CGG 0.526926 3_4:-6846494 None:intergenic
TCATCGGCCGCAACAAGAGT+TGG 0.528330 3_4:+6847972 Msa0487720:CDS
GAAGGGAAACTTTCAAAGAA+AGG 0.528593 3_4:+6853163 Msa0487720:CDS
ACAGACCTTACAAGTAGCTT+AGG 0.531857 3_4:-6854224 None:intergenic
TGCTGTTGACAGTGGTCCAC+TGG 0.532809 3_4:+6846746 Msa0487720:CDS
ATGAGCCTAAGCTACTTGTA+AGG 0.533985 3_4:+6854219 Msa0487720:three_prime_UTR
CCCTATATAGTGAAGGATGA+TGG 0.537091 3_4:+6853124 Msa0487720:CDS
ATAGGATGTTAACATGTCTT+CGG 0.537587 3_4:+6854812 Msa0487720:three_prime_UTR
AATCCAGACCTTGAACCAAA+AGG 0.539385 3_4:-6852464 None:intergenic
TGATGGGCTAGACCCTTGTA+TGG 0.539425 3_4:+6854462 Msa0487720:three_prime_UTR
CTGCCTTTACTGTGGTCCCC+AGG 0.539742 3_4:+6849784 Msa0487720:CDS
ACGCCTGGGGACCACAGTAA+AGG 0.540090 3_4:-6849787 None:intergenic
TGGTTGTCAGTATGTTCAGA+AGG 0.540774 3_4:+6849719 Msa0487720:intron
CTCCTTTCTAGGGGCTAGCA+AGG 0.541253 3_4:+6846677 Msa0487720:intron
TCAACTGATTCAGGATATGA+TGG 0.541254 3_4:-6852725 None:intergenic
AGAACCTGGTGTTGCCGGAA+CGG 0.547443 3_4:-6844827 None:intergenic
ACCTATTGTCACACCCCTGA+TGG 0.547863 3_4:+6846704 Msa0487720:CDS
ACTCAACTACTGCTTTATGC+TGG 0.548532 3_4:-6846231 None:intergenic
AGTAGTCCCTCTGTTGAGAA+TGG 0.556313 3_4:+6852950 Msa0487720:CDS
CTGACGTATATATGCCATCA+GGG 0.556567 3_4:-6846718 None:intergenic
CATGTCTCTAGTCATGATGC+TGG 0.556919 3_4:+6852494 Msa0487720:CDS
TTCGGTAAATAGTCATGTCA+AGG 0.559772 3_4:-6854414 None:intergenic
TTTAGCTTCACCCTAAATGT+GGG 0.559799 3_4:+6854642 Msa0487720:three_prime_UTR
AATGATAAGGAATGGCATGC+GGG 0.560780 3_4:+6854882 Msa0487720:three_prime_UTR
TATTACAAAATGATAAGGAA+TGG 0.560837 3_4:+6854874 Msa0487720:three_prime_UTR
CCTTCTGAAAGGAAAACAGC+GGG 0.562206 3_4:+6851887 Msa0487720:CDS
AGAGCCAGAGCTGCTATGCA+AGG 0.562280 3_4:+6847999 Msa0487720:CDS
TCTTAACTTCTGAGAATGGA+AGG 0.562840 3_4:+6852429 Msa0487720:CDS
GTGCAGTCAGTTCGAGTGAA+GGG 0.563790 3_4:+6853146 Msa0487720:CDS
GGAACAAACACAATTTAGTC+CGG 0.566913 3_4:+6854684 Msa0487720:three_prime_UTR
GAAGAACGAAAGTAGTGATA+CGG 0.568918 3_4:+6844721 Msa0487720:CDS
GGCTTTGGAACACGCTGAGA+AGG 0.570985 3_4:-6846259 None:intergenic
TACTGTGGTCCCCAGGCGTG+AGG 0.571346 3_4:+6849791 Msa0487720:CDS
TTTGACATATATAGTCGAGT+AGG 0.572107 3_4:+6854711 Msa0487720:three_prime_UTR
TGGAACTTTCAGGCCACTGA+AGG 0.573276 3_4:+6852242 Msa0487720:intron
TGGCCCCAGTAATACCAGAC+GGG 0.576005 3_4:+6848028 Msa0487720:CDS
GCTGGGCATGCTAATTCTGA+AGG 0.580615 3_4:+6852512 Msa0487720:CDS
GCTCCTGATCAATCTTCCAC+CGG 0.582381 3_4:-6852342 None:intergenic
ACATTGTTAACCATGTTGAT+GGG 0.583458 3_4:+6854446 Msa0487720:three_prime_UTR
ATTCCTGCTACATTGAGCTA+GGG 0.584979 3_4:+6854157 Msa0487720:three_prime_UTR
TGAGCTCTCATCATCCTCAC+TGG 0.585263 3_4:+6852691 Msa0487720:CDS
AGTGATAGCGAGAAGAGAAA+CGG 0.586244 3_4:-6844794 None:intergenic
AGAAAGGAAGCTGAGCAAGC+TGG 0.587029 3_4:+6846518 Msa0487720:CDS
CACCAACCATTCTCAACAGA+GGG 0.588071 3_4:-6852956 None:intergenic
TTCGGTACACATCCCAGATG+AGG 0.588555 3_4:+6854830 Msa0487720:three_prime_UTR
GCACTCGGAAGATGTTCTTG+AGG 0.590407 3_4:-6846479 None:intergenic
GGTGCAGTCAGTTCGAGTGA+AGG 0.593819 3_4:+6853145 Msa0487720:CDS
CTGGGCATGCTAATTCTGAA+GGG 0.594470 3_4:+6852513 Msa0487720:CDS
TCTTCTGCCAACTCTTGTTG+CGG 0.594967 3_4:-6847979 None:intergenic
AGCACAACACAATACAAACT+GGG 0.599178 3_4:-6844600 None:intergenic
ATGTCTCTAGTCATGATGCT+GGG 0.599416 3_4:+6852495 Msa0487720:CDS
ATCAACATGGTTAACAATGT+CGG 0.601385 3_4:-6854443 None:intergenic
TCGGATTCGGTTAGAGATGG+TGG 0.601938 3_4:-6844750 None:intergenic
AACCAAAAGCGTGAAGCCGG+TGG 0.606148 3_4:+6852326 Msa0487720:CDS
GAATTCTCAACTTCTGCAGG+TGG 0.610336 3_4:+6852923 Msa0487720:CDS
TTTCCTGAGTCAGAAGTCAG+TGG 0.613047 3_4:-6851852 None:intergenic
AGATCGGATTCGGTTAGAGA+TGG 0.613744 3_4:-6844753 None:intergenic
ATACCACTGACTTCTGACTC+AGG 0.622853 3_4:+6851849 Msa0487720:CDS
CTGGCCCCAGTAATACCAGA+CGG 0.624233 3_4:+6848027 Msa0487720:CDS
GACGTACTAGAAACAAGGAC+AGG 0.626561 3_4:+6852612 Msa0487720:CDS
TGTTCCGCGTTTAGAACCAA+CGG 0.626690 3_4:-6854667 None:intergenic
TCGGTACACATCCCAGATGA+GGG 0.633083 3_4:+6854831 Msa0487720:three_prime_UTR
GCAAACAGATTATGGACACT+CGG 0.636447 3_4:+6854099 Msa0487720:intron
TGGGGCTCCCTATATAGTGA+AGG 0.637270 3_4:+6853117 Msa0487720:CDS
ATTGATGAATATACAGTGCA+TGG 0.638195 3_4:+6851804 Msa0487720:CDS
AAATGATAAGGAATGGCATG+CGG 0.638715 3_4:+6854881 Msa0487720:three_prime_UTR
AACAAGGACAGGCCTGATCG+TGG 0.639778 3_4:+6852623 Msa0487720:CDS
AGTCAGTGGTATTCCAGAGA+CGG 0.644574 3_4:-6851838 None:intergenic
CAGAAGCGTGCTGTTGACAG+TGG 0.645146 3_4:+6846738 Msa0487720:CDS
TGGGCATGCTAATTCTGAAG+GGG 0.646561 3_4:+6852514 Msa0487720:CDS
GACCTTGAACCAAAAGGACG+AGG 0.650876 3_4:-6852458 None:intergenic
TGTTGGGAATAGTACTCATG+AGG 0.651580 3_4:+6853186 Msa0487720:CDS
GCTTATTCGGGAAACAGGAG+TGG 0.655321 3_4:+6852899 Msa0487720:CDS
AGAAAGACGTACTAGAAACA+AGG 0.658009 3_4:+6852607 Msa0487720:CDS
AAGAATGGTCCTCACGCCTG+GGG 0.661060 3_4:-6849800 None:intergenic
ATGTCGACCTGAATTGGACG+CGG 0.663849 3_4:-6854198 None:intergenic
TCCTTCTGAAAGGAAAACAG+CGG 0.668874 3_4:+6851886 Msa0487720:CDS
CTTGAACCAAAAGGACGAGG+TGG 0.668946 3_4:-6852455 None:intergenic
GAAGAATCGGAACGGCGAAG+AGG 0.673314 3_4:-6852656 None:intergenic
GGTTCCGTTGGTTCTAAACG+CGG 0.674902 3_4:+6854663 Msa0487720:three_prime_UTR
ACACCAACCATTCTCAACAG+AGG 0.678931 3_4:-6852957 None:intergenic
AGACAAATCTGCCTTTACTG+TGG 0.679939 3_4:+6849776 Msa0487720:CDS
GGCCCCAGTAATACCAGACG+GGG 0.682231 3_4:+6848029 Msa0487720:CDS
AAGGGTCTAGCCCATCAACA+TGG 0.690955 3_4:-6854456 None:intergenic
TAGAATGTGAAGAATCGGAA+CGG 0.692170 3_4:-6852664 None:intergenic
GCAGTAGATGTAGACTGACT+CGG 0.696602 3_4:-6852389 None:intergenic
AAAAGACACGAACCATACAA+GGG 0.708140 3_4:-6854474 None:intergenic
GGTAAATAGTCATGTCAAGG+AGG 0.708304 3_4:-6854411 None:intergenic
ATCCCCGTCTGGTATTACTG+GGG 0.712694 3_4:-6848031 None:intergenic
TGACGTATATATGCCATCAG+GGG 0.713880 3_4:-6846717 None:intergenic
TGGTGCAGACTGTGCCAGTG+AGG 0.729152 3_4:-6852705 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTGATTTTTTAAAAATG+TGG + chr3_4:6847749-6847768 Msa0487720:intron 10.0%
!!! TTTTTAAAATATAATGCTTA+TGG - chr3_4:6850992-6851011 None:intergenic 10.0%
!! CATAATGAAAAATTTAATAA+GGG - chr3_4:6852213-6852232 None:intergenic 10.0%
!! TCATAATGAAAAATTTAATA+AGG - chr3_4:6852214-6852233 None:intergenic 10.0%
!!! AAAAGAAAATTAGTTTTAAT+TGG + chr3_4:6853677-6853696 Msa0487720:intron 10.0%
!!! AAAGAAAATTAGTTTTAATT+GGG + chr3_4:6853678-6853697 Msa0487720:intron 10.0%
!!! TATTGTAATTATTGTTGTTA+CGG + chr3_4:6845343-6845362 Msa0487720:intron 15.0%
!! AAGATAAAATCAAATCAAAT+TGG - chr3_4:6845860-6845879 None:intergenic 15.0%
!! AAAAAAATCAACATTTAGAA+AGG - chr3_4:6846169-6846188 None:intergenic 15.0%
!! CTATTAGAATTAAAAGAATA+AGG - chr3_4:6846960-6846979 None:intergenic 15.0%
!! ATATCATATCACATAAATAA+GGG - chr3_4:6847202-6847221 None:intergenic 15.0%
!! AGTATATATTATTATATTGC+TGG + chr3_4:6848091-6848110 Msa0487720:intron 15.0%
!!! TTTTATTTTCTTTCCAATTT+GGG + chr3_4:6848546-6848565 Msa0487720:intron 15.0%
!! TAGATTACATATAAAAAGAA+TGG + chr3_4:6848683-6848702 Msa0487720:intron 15.0%
!! ATATAAAAAGAATGGAAAAA+GGG + chr3_4:6848691-6848710 Msa0487720:intron 15.0%
!! AAAAATAAATGAATGTGTTA+GGG + chr3_4:6848988-6849007 Msa0487720:intron 15.0%
!! TAGAAAGAATTGAAAAAAAT+GGG - chr3_4:6849091-6849110 None:intergenic 15.0%
!! ATAGAAAGAATTGAAAAAAA+TGG - chr3_4:6849092-6849111 None:intergenic 15.0%
!! TAGAAAGAATTGAAAAAAAT+GGG - chr3_4:6849091-6849110 None:intergenic 15.0%
!! ATAGAAAGAATTGAAAAAAA+TGG - chr3_4:6849092-6849111 None:intergenic 15.0%
!!! ATTTATTTTCTTTCTCTTTT+TGG + chr3_4:6849480-6849499 Msa0487720:intron 15.0%
!!! TTTATTTTCTTTCTCTTTTT+GGG + chr3_4:6849481-6849500 Msa0487720:intron 15.0%
!!! TTGTTCATTTTATAAATAGA+GGG - chr3_4:6850745-6850764 None:intergenic 15.0%
!!! ATTGTTCATTTTATAAATAG+AGG - chr3_4:6850746-6850765 None:intergenic 15.0%
!!! AATGATTAGAATTTTAGATT+GGG - chr3_4:6851027-6851046 None:intergenic 15.0%
!!! AAATGATTAGAATTTTAGAT+TGG - chr3_4:6851028-6851047 None:intergenic 15.0%
!! ACAAATTGACAAATTTAATT+TGG - chr3_4:6851680-6851699 None:intergenic 15.0%
!!! AAGAACATTATTTTCTTATA+AGG - chr3_4:6852023-6852042 None:intergenic 15.0%
!!! TACATTTTGTTATTACAAAT+AGG + chr3_4:6854794-6854813 Msa0487720:three_prime_UTR 15.0%
!! CAAATTATTACAAAATGATA+AGG + chr3_4:6854869-6854888 Msa0487720:three_prime_UTR 15.0%
!! AAAATGAAACAGAATTGTTA+GGG - chr3_4:6844874-6844893 None:intergenic 20.0%
!! AAATTTATATGTGCAGTTAT+AGG + chr3_4:6845494-6845513 Msa0487720:intron 20.0%
!!! TTTGTTTTTCATATGCAATA+TGG + chr3_4:6845682-6845701 Msa0487720:intron 20.0%
!! TTAAAAAGTGAAGGTTTAAA+TGG - chr3_4:6846026-6846045 None:intergenic 20.0%
!!! TTAAACCTTCACTTTTTAAA+AGG + chr3_4:6846027-6846046 Msa0487720:intron 20.0%
!!! TAAACCTTCACTTTTTAAAA+GGG + chr3_4:6846028-6846047 Msa0487720:intron 20.0%
!!! AAAAAGTGTAAATCAAATAC+AGG - chr3_4:6846562-6846581 None:intergenic 20.0%
!!! TGTTTTTTCTTATACTCTAA+AGG + chr3_4:6846799-6846818 Msa0487720:intron 20.0%
!!! GTTTTTTCTTATACTCTAAA+GGG + chr3_4:6846800-6846819 Msa0487720:intron 20.0%
!!! TTTTTTCTTATACTCTAAAG+GGG + chr3_4:6846801-6846820 Msa0487720:intron 20.0%
!!! TTTTTTATAAGAATGTGCTT+TGG + chr3_4:6846867-6846886 Msa0487720:intron 20.0%
!!! TTTTTATAAGAATGTGCTTT+GGG + chr3_4:6846868-6846887 Msa0487720:intron 20.0%
!! TAGAATTAAAAGAATAAGGA+GGG - chr3_4:6846956-6846975 None:intergenic 20.0%
!! TTAGAATTAAAAGAATAAGG+AGG - chr3_4:6846957-6846976 None:intergenic 20.0%
!! CATATCATATCACATAAATA+AGG - chr3_4:6847203-6847222 None:intergenic 20.0%
!!! AACTTAATATAGCAGAATTT+TGG + chr3_4:6847343-6847362 Msa0487720:intron 20.0%
!! ATATTCATATGACTTATATG+AGG + chr3_4:6847476-6847495 Msa0487720:intron 20.0%
!! TATTCATATGACTTATATGA+GGG + chr3_4:6847477-6847496 Msa0487720:intron 20.0%
!!! TTTTAGTTGCTCAAATATAA+TGG - chr3_4:6847518-6847537 None:intergenic 20.0%
!! AAATAAAAAAACAAACCAGT+TGG - chr3_4:6847641-6847660 None:intergenic 20.0%
!! TATATATAATTTCATCCAAC+AGG - chr3_4:6847859-6847878 None:intergenic 20.0%
!! CAGATAAATATAAGTTAAGA+TGG + chr3_4:6847896-6847915 Msa0487720:intron 20.0%
!! ATACTTGAACTTGATTATAA+AGG - chr3_4:6848076-6848095 None:intergenic 20.0%
!! TTGCACTAATGAAAATTAAT+AGG - chr3_4:6848184-6848203 None:intergenic 20.0%
!!! GATGACAAAATATTATTTCT+CGG - chr3_4:6848306-6848325 None:intergenic 20.0%
!!! GTTTTATTTTCTTTCCAATT+TGG + chr3_4:6848545-6848564 Msa0487720:intron 20.0%
!! ATTAATAAGAAAACCCAAAT+TGG - chr3_4:6848562-6848581 None:intergenic 20.0%
!! CTAACGTAATAAGAATTAAT+CGG - chr3_4:6848666-6848685 None:intergenic 20.0%
!! CATATAAAAAGAATGGAAAA+AGG + chr3_4:6848690-6848709 Msa0487720:intron 20.0%
!! CAAAAATAAATGAATGTGTT+AGG + chr3_4:6848987-6849006 Msa0487720:intron 20.0%
!! AAAAAAGCAATCAATTAAGA+AGG + chr3_4:6849141-6849160 Msa0487720:intron 20.0%
!! AAAAAAGCAATCAATTAAGA+AGG + chr3_4:6849141-6849160 Msa0487720:intron 20.0%
!! TTAGATAAAAGATAATAGAC+TGG - chr3_4:6849388-6849407 None:intergenic 20.0%
!!! TTATCTTTTATCTAATGCTT+TGG + chr3_4:6849393-6849412 Msa0487720:intron 20.0%
!! AACATCTATATATCAACAAT+AGG - chr3_4:6849645-6849664 None:intergenic 20.0%
!! CAAAACTAATATTCATTAAG+TGG - chr3_4:6849701-6849720 None:intergenic 20.0%
!!! CACTTAATGAATATTAGTTT+TGG + chr3_4:6849699-6849718 Msa0487720:intron 20.0%
!! ATACATCTTGAAATCAAATA+TGG - chr3_4:6850062-6850081 None:intergenic 20.0%
!!! ATATTTGATTTCAAGATGTA+TGG + chr3_4:6850061-6850080 Msa0487720:intron 20.0%
!! TTTCCAGTTTAATATATAGA+TGG + chr3_4:6850587-6850606 Msa0487720:intron 20.0%
!! TGACATATGAATTAAACTTA+GGG - chr3_4:6850714-6850733 None:intergenic 20.0%
!!! TGTTCATTTTATAAATAGAG+GGG - chr3_4:6850744-6850763 None:intergenic 20.0%
!! GTCATTTATTGTAAATACAA+GGG - chr3_4:6850774-6850793 None:intergenic 20.0%
!!! TGTCATTTATTGTAAATACA+AGG - chr3_4:6850775-6850794 None:intergenic 20.0%
!!! TCTTATATTTCTTCTTTTCA+AGG - chr3_4:6851083-6851102 None:intergenic 20.0%
!!! TTTTTGCTGATTTAGTTTAA+AGG - chr3_4:6851518-6851537 None:intergenic 20.0%
!! ACATGTTTGGAAATTTAATT+TGG - chr3_4:6851608-6851627 None:intergenic 20.0%
!! ATCTATAAAAGTAAGTGAAA+TGG - chr3_4:6851980-6851999 None:intergenic 20.0%
!!! TTTTCATTATGAACTTTCTA+TGG + chr3_4:6852222-6852241 Msa0487720:intron 20.0%
!! ACAATATAAACAACTATAGA+AGG + chr3_4:6853014-6853033 Msa0487720:intron 20.0%
!!! TTCTTTTCTTTCTTTTCTTT+TGG - chr3_4:6853664-6853683 None:intergenic 20.0%
!! TGTATATTTAGTTACATAGA+GGG - chr3_4:6853749-6853768 None:intergenic 20.0%
!! ATGTATATTTAGTTACATAG+AGG - chr3_4:6853750-6853769 None:intergenic 20.0%
!! TCATAAGTCTAAATAAACTT+TGG + chr3_4:6853853-6853872 Msa0487720:intron 20.0%
!! AACAATTACTTGAAAAATTG+AGG + chr3_4:6854129-6854148 Msa0487720:three_prime_UTR 20.0%
!! ACAATTACTTGAAAAATTGA+GGG + chr3_4:6854130-6854149 Msa0487720:three_prime_UTR 20.0%
!!! TTTTCGAATATTTTGGTTTT+GGG + chr3_4:6854493-6854512 Msa0487720:three_prime_UTR 20.0%
!! TATTACAAAATGATAAGGAA+TGG + chr3_4:6854874-6854893 Msa0487720:three_prime_UTR 20.0%
! GAAAATGAAACAGAATTGTT+AGG - chr3_4:6844875-6844894 None:intergenic 25.0%
! AAAATGAAACTGAATCGTTA+GGG - chr3_4:6845128-6845147 None:intergenic 25.0%
! AAAAATGAAACTGAATCGTT+AGG - chr3_4:6845129-6845148 None:intergenic 25.0%
! ATTATTGTTCTGATTATGTG+TGG + chr3_4:6845315-6845334 Msa0487720:intron 25.0%
!! TCTGTTTCAAATTCATTTTG+TGG + chr3_4:6845626-6845645 Msa0487720:intron 25.0%
! AACTCAGGTTTAAACAATTA+AGG - chr3_4:6845963-6845982 None:intergenic 25.0%
! AATGGAAAACATAATAACTC+AGG - chr3_4:6846008-6846027 None:intergenic 25.0%
!! ACTCAATTGAATGTTTTTCA+CGG + chr3_4:6846072-6846091 Msa0487720:intron 25.0%
! CAAAATTCTAACTTTCATTC+TGG + chr3_4:6846116-6846135 Msa0487720:intron 25.0%
! AGAAATACAATTGGAAAGAA+AGG + chr3_4:6846502-6846521 Msa0487720:CDS 25.0%
!! TTTTATAAGAATGTGCTTTG+GGG + chr3_4:6846869-6846888 Msa0487720:intron 25.0%
! AAATATATATTGTGAGCTGT+GGG + chr3_4:6846926-6846945 Msa0487720:intron 25.0%
! TATTTGAGCAACTAAAACTT+TGG + chr3_4:6847521-6847540 Msa0487720:intron 25.0%
!! TGAACAATTTTATTCATGCT+TGG + chr3_4:6847576-6847595 Msa0487720:intron 25.0%
!! GAACAATTTTATTCATGCTT+GGG + chr3_4:6847577-6847596 Msa0487720:intron 25.0%
!! AACAATTTTATTCATGCTTG+GGG + chr3_4:6847578-6847597 Msa0487720:intron 25.0%
!!! TTTATTTTGTTCTTTCCAAC+TGG + chr3_4:6847623-6847642 Msa0487720:intron 25.0%
!!! TATACTTTTTGTTCCTTCAT+TGG + chr3_4:6847717-6847736 Msa0487720:intron 25.0%
!!! ATACTTTTTGTTCCTTCATT+GGG + chr3_4:6847718-6847737 Msa0487720:intron 25.0%
! AATGCACTCATAAAATTTGT+TGG + chr3_4:6847774-6847793 Msa0487720:intron 25.0%
!! AAGGTTAACCTTTTTCTTTT+CGG - chr3_4:6848057-6848076 None:intergenic 25.0%
! TAGAATTAAGATTGCTACAA+AGG - chr3_4:6848239-6848258 None:intergenic 25.0%
! ATTAGTATTTGTCTACTAAG+TGG + chr3_4:6848280-6848299 Msa0487720:intron 25.0%
! GCATTAACTATTCAATTGAT+TGG + chr3_4:6848823-6848842 Msa0487720:intron 25.0%
! CAAACTAAAAACTAGACATA+AGG - chr3_4:6848851-6848870 None:intergenic 25.0%
!!! CTTAATTGATTGCTTTTTTC+TGG - chr3_4:6849140-6849159 None:intergenic 25.0%
! TCAAGAAATGAATGTGTTAT+GGG + chr3_4:6849184-6849203 Msa0487720:intron 25.0%
!!! CTTAATTGATTGCTTTTTTC+TGG - chr3_4:6849140-6849159 None:intergenic 25.0%
! TAAAAGATAATAGACTGGAA+AGG - chr3_4:6849383-6849402 None:intergenic 25.0%
! ATAGATGTGAATTGAAACAT+GGG + chr3_4:6849549-6849568 Msa0487720:intron 25.0%
! TTATACTTGATTCAGAAGAA+TGG - chr3_4:6849818-6849837 None:intergenic 25.0%
! TCTTCTGAATCAAGTATAAA+AGG + chr3_4:6849819-6849838 Msa0487720:CDS 25.0%
!! CATATTAAGCTTTTGACAAA+GGG - chr3_4:6850017-6850036 None:intergenic 25.0%
!! ACATATTAAGCTTTTGACAA+AGG - chr3_4:6850018-6850037 None:intergenic 25.0%
! TATGTATATATGCCATGTAT+AGG - chr3_4:6850275-6850294 None:intergenic 25.0%
!!! TTTTCTACTTCGCTTTATTA+AGG - chr3_4:6850340-6850359 None:intergenic 25.0%
! CTCATATGATTATGATTGTT+AGG - chr3_4:6850488-6850507 None:intergenic 25.0%
! CTAACAATCATAATCATATG+AGG + chr3_4:6850486-6850505 Msa0487720:intron 25.0%
! AAGCCATCTATATATTAAAC+TGG - chr3_4:6850593-6850612 None:intergenic 25.0%
! GGAGTTTCAATTGATATTAT+AGG + chr3_4:6850653-6850672 Msa0487720:intron 25.0%
! GACATATGAATTAAACTTAG+GGG - chr3_4:6850713-6850732 None:intergenic 25.0%
! GTGACATATGAATTAAACTT+AGG - chr3_4:6850715-6850734 None:intergenic 25.0%
!! GTTCATTTTATAAATAGAGG+GGG - chr3_4:6850743-6850762 None:intergenic 25.0%
! ATTTATTGTAAATACAAGGG+AGG - chr3_4:6850771-6850790 None:intergenic 25.0%
!! CAATCGATTTATTCATATGA+AGG - chr3_4:6850876-6850895 None:intergenic 25.0%
! GTTCAAAACAATTGAAGAAT+GGG - chr3_4:6851059-6851078 None:intergenic 25.0%
! AGTTCAAAACAATTGAAGAA+TGG - chr3_4:6851060-6851079 None:intergenic 25.0%
!! AACAGTTTTTCTTTTAACGA+TGG + chr3_4:6851289-6851308 Msa0487720:intron 25.0%
!! AAATGCTTTCTGAAGAATAA+AGG + chr3_4:6851340-6851359 Msa0487720:intron 25.0%
!! AATGCTTTCTGAAGAATAAA+GGG + chr3_4:6851341-6851360 Msa0487720:intron 25.0%
! TTAGTTTAAAGGTTTGGAAA+AGG - chr3_4:6851507-6851526 None:intergenic 25.0%
! AATGCTTTATAGTAGAAAAG+TGG + chr3_4:6851537-6851556 Msa0487720:intron 25.0%
!!! CATTTTTTGGAAAACATGTT+TGG - chr3_4:6851621-6851640 None:intergenic 25.0%
! TACTTTAATGCAAACATGTT+TGG - chr3_4:6851648-6851667 None:intergenic 25.0%
! CAGATAATTAAACCTACTTT+GGG - chr3_4:6851918-6851937 None:intergenic 25.0%
! ACAGATAATTAAACCTACTT+TGG - chr3_4:6851919-6851938 None:intergenic 25.0%
!! ATTGGAGTTAATCTTTGTTT+GGG + chr3_4:6852093-6852112 Msa0487720:intron 25.0%
!! TTTGTAAGAAGAGATTTTCA+TGG + chr3_4:6852563-6852582 Msa0487720:CDS 25.0%
! ATTACTAGAATGTGAAGAAT+CGG - chr3_4:6852672-6852691 None:intergenic 25.0%
!!! CTTTGTTTTGAAATTTCAAG+TGG - chr3_4:6852813-6852832 None:intergenic 25.0%
! AGTGATTGAAATCTATTGTA+TGG + chr3_4:6852836-6852855 Msa0487720:intron 25.0%
! GGTAAAAGAAAATGCTTATT+CGG + chr3_4:6852886-6852905 Msa0487720:CDS 25.0%
! GTAAAAGAAAATGCTTATTC+GGG + chr3_4:6852887-6852906 Msa0487720:CDS 25.0%
!!! AACTATAGAAGGTATTTATC+TGG + chr3_4:6853025-6853044 Msa0487720:intron 25.0%
!!! ACTATAGAAGGTATTTATCT+GGG + chr3_4:6853026-6853045 Msa0487720:intron 25.0%
!!! ATCGATTTTTTTATCTCTGT+AGG + chr3_4:6853070-6853089 Msa0487720:intron 25.0%
!!! ATACAGAAAAGCATTTTACA+GGG - chr3_4:6853261-6853280 None:intergenic 25.0%
! AAAACATTCTGTAAAACTTG+TGG + chr3_4:6853453-6853472 Msa0487720:intron 25.0%
!! TGACATATTTGTGATTTTCT+TGG + chr3_4:6853483-6853502 Msa0487720:intron 25.0%
!!! ATGATTGTTTTAGAAGAGTT+AGG - chr3_4:6853587-6853606 None:intergenic 25.0%
! AAAACAATCATGTGAATCTT+TGG + chr3_4:6853596-6853615 Msa0487720:intron 25.0%
!!! TTTTCTTTTGGTTTTCAACA+GGG - chr3_4:6853652-6853671 None:intergenic 25.0%
! TCATGTGAATTCATATTTCA+AGG - chr3_4:6853708-6853727 None:intergenic 25.0%
!!! AGTGAGTTTTAAGATGTTAA+AGG - chr3_4:6853953-6853972 None:intergenic 25.0%
! CAATTACTTGAAAAATTGAG+GGG + chr3_4:6854131-6854150 Msa0487720:three_prime_UTR 25.0%
! GACTTGTAATCAATTTCTAA+TGG + chr3_4:6854317-6854336 Msa0487720:intron 25.0%
!!! CTTTTCGAATATTTTGGTTT+TGG + chr3_4:6854492-6854511 Msa0487720:three_prime_UTR 25.0%
! ACTATATATGTCAAATGAAC+CGG - chr3_4:6854706-6854725 None:intergenic 25.0%
! TTTCGAAGTTGGTTTCATTT+CGG + chr3_4:6844661-6844680 Msa0487720:five_prime_UTR 30.0%
!!! AGCTGTTAGTCTTAGTTTTT+CGG + chr3_4:6845236-6845255 Msa0487720:intron 30.0%
! AATATGGAACGTAGCTTTTA+GGG + chr3_4:6845698-6845717 Msa0487720:intron 30.0%
AATAAGCTGAAAACAGCTTA+TGG - chr3_4:6845818-6845837 None:intergenic 30.0%
ATTGGATTCATGTAAGCTTA+CGG - chr3_4:6845842-6845861 None:intergenic 30.0%
! AATTAAGGCTCTAATAACTC+AGG - chr3_4:6845978-6845997 None:intergenic 30.0%
AACTCAGGTCTAAACAATTA+AGG - chr3_4:6845993-6846012 None:intergenic 30.0%
!! CTAACCCTTTTAAAAAGTGA+AGG - chr3_4:6846035-6846054 None:intergenic 30.0%
!!! TCACTTTTTAAAAGGGTTAG+TGG + chr3_4:6846035-6846054 Msa0487720:intron 30.0%
ATCAGGCATTAATATTTGCA+TGG - chr3_4:6846197-6846216 None:intergenic 30.0%
TTAATGCCTGATATTCAATC+AGG + chr3_4:6846205-6846224 Msa0487720:intron 30.0%
CTTTATATATAGTCCCTTCA+CGG - chr3_4:6846303-6846322 None:intergenic 30.0%
ATGCTAATTGTCTAGGTTAA+CGG + chr3_4:6846373-6846392 Msa0487720:intron 30.0%
AAGTGTAAATCAAATACAGG+TGG - chr3_4:6846559-6846578 None:intergenic 30.0%
AAAAAACACTTATAGCTACG+AGG - chr3_4:6846853-6846872 None:intergenic 30.0%
GAAATATATATTGTGAGCTG+TGG + chr3_4:6846925-6846944 Msa0487720:intron 30.0%
GCTAGAACATATTCTATCTA+TGG + chr3_4:6847000-6847019 Msa0487720:intron 30.0%
GTTTAAATTCTCGAGGAATT+TGG + chr3_4:6847053-6847072 Msa0487720:intron 30.0%
TATCTCTGCCATAAAAATCA+TGG - chr3_4:6847321-6847340 None:intergenic 30.0%
! TTGGATTGGATTCTAACTTA+CGG + chr3_4:6847540-6847559 Msa0487720:intron 30.0%
AAGTATAGAGAGCTAACAAA+GGG - chr3_4:6847704-6847723 None:intergenic 30.0%
AAAGTATAGAGAGCTAACAA+AGG - chr3_4:6847705-6847724 None:intergenic 30.0%
! CTTTTATGTCAACAAAGTCA+TGG - chr3_4:6848151-6848170 None:intergenic 30.0%
AATTAAGATTGCTACAAAGG+AGG - chr3_4:6848236-6848255 None:intergenic 30.0%
GCAATCTTAATTCTATGTGT+AGG + chr3_4:6848244-6848263 Msa0487720:intron 30.0%
TTTGTCATCTTATTGTTGCT+TGG + chr3_4:6848317-6848336 Msa0487720:intron 30.0%
AAACAAAACTGTCTGTGAAA+TGG + chr3_4:6848340-6848359 Msa0487720:intron 30.0%
! GTGTGGATTGAAAAAAAAGA+TGG + chr3_4:6848761-6848780 Msa0487720:intron 30.0%
!!! CACAAGAAATTTTTGAGACA+GGG - chr3_4:6848788-6848807 None:intergenic 30.0%
!! TTTTTCAACTACACCTAAAG+AGG + chr3_4:6848871-6848890 Msa0487720:intron 30.0%
! TTTTCAACTACACCTAAAGA+GGG + chr3_4:6848872-6848891 Msa0487720:intron 30.0%
TAACACATTCATTTCTTGAG+TGG - chr3_4:6849183-6849202 None:intergenic 30.0%
CTCAAGAAATGAATGTGTTA+TGG + chr3_4:6849183-6849202 Msa0487720:intron 30.0%
GTTTCAATTCACATCTATCT+AGG - chr3_4:6849547-6849566 None:intergenic 30.0%
GATAGATGTGAATTGAAACA+TGG + chr3_4:6849548-6849567 Msa0487720:intron 30.0%
AAACAATCTGAAGACATACA+GGG - chr3_4:6849616-6849635 None:intergenic 30.0%
ACAATGTCAAGAATGCTAAT+CGG + chr3_4:6849742-6849761 Msa0487720:CDS 30.0%
!! CTTTTTCATGTGAATATCTC+TGG + chr3_4:6849901-6849920 Msa0487720:intron 30.0%
ATAGTTATTCAGTTCTGTAG+CGG + chr3_4:6849930-6849949 Msa0487720:intron 30.0%
!! TAAGGAAGAGACTTTTGTTT+TGG - chr3_4:6850097-6850116 None:intergenic 30.0%
AACAGATATGATTAGGAGTT+GGG - chr3_4:6850144-6850163 None:intergenic 30.0%
! GTATAGGCTACTTTGATATT+GGG - chr3_4:6850259-6850278 None:intergenic 30.0%
! TGTATAGGCTACTTTGATAT+TGG - chr3_4:6850260-6850279 None:intergenic 30.0%
ATATCAAAGTAGCCTATACA+TGG + chr3_4:6850260-6850279 Msa0487720:intron 30.0%
ATAATCATATGAGGAGAAAC+TGG + chr3_4:6850495-6850514 Msa0487720:intron 30.0%
TAATCATATGAGGAGAAACT+GGG + chr3_4:6850496-6850515 Msa0487720:intron 30.0%
CAGCAAAGAAAAGAAACAAA+AGG - chr3_4:6850563-6850582 None:intergenic 30.0%
!! AGTCTACTTTTCCTATATAG+TGG + chr3_4:6850632-6850651 Msa0487720:intron 30.0%
CAATTGAAACTCCACTATAT+AGG - chr3_4:6850646-6850665 None:intergenic 30.0%
TATAGGACGAAATATCCTTA+AGG + chr3_4:6850670-6850689 Msa0487720:intron 30.0%
ATAGGACGAAATATCCTTAA+GGG + chr3_4:6850671-6850690 Msa0487720:intron 30.0%
ATATGAATTAAACTTAGGGG+AGG - chr3_4:6850710-6850729 None:intergenic 30.0%
CTACTTATTCACTTTGTCAT+AGG - chr3_4:6851233-6851252 None:intergenic 30.0%
! TTCTTTTAACGATGGCTTAA+CGG + chr3_4:6851297-6851316 Msa0487720:intron 30.0%
! TTAACGGTGTTAGAATTCAA+GGG + chr3_4:6851313-6851332 Msa0487720:intron 30.0%
! ATGCTTTCTGAAGAATAAAG+GGG + chr3_4:6851342-6851361 Msa0487720:intron 30.0%
GGTAACAACATTTAAGGATA+GGG - chr3_4:6851413-6851432 None:intergenic 30.0%
AGGTAACAACATTTAAGGAT+AGG - chr3_4:6851414-6851433 None:intergenic 30.0%
TTTAAAGGTTTGGAAAAGGT+GGG - chr3_4:6851503-6851522 None:intergenic 30.0%
! GCTGATTTAGTTTAAAGGTT+TGG - chr3_4:6851513-6851532 None:intergenic 30.0%
TAGAAAAGTGGATGAAAAGT+AGG + chr3_4:6851549-6851568 Msa0487720:intron 30.0%
ACACAACAAGTTTCTATACT+AGG - chr3_4:6851577-6851596 None:intergenic 30.0%
!!! CATGTTTGGAAAGCATTTTT+TGG - chr3_4:6851634-6851653 None:intergenic 30.0%
!! GACAAATTTAATTTGGCTGA+TGG - chr3_4:6851673-6851692 None:intergenic 30.0%
CAGCTAAAATACATGAAACT+TGG - chr3_4:6851746-6851765 None:intergenic 30.0%
ATTGATGAATATACAGTGCA+TGG + chr3_4:6851804-6851823 Msa0487720:CDS 30.0%
AACTCCAATGTTAGATAGAT+CGG - chr3_4:6852082-6852101 None:intergenic 30.0%
CATTGGAGTTAATCTTTGTT+TGG + chr3_4:6852092-6852111 Msa0487720:intron 30.0%
!!! TGTTTTGAAGTAGTTGGAAT+GGG - chr3_4:6852305-6852324 None:intergenic 30.0%
! CAAATCTTAACTTCTGAGAA+TGG + chr3_4:6852425-6852444 Msa0487720:CDS 30.0%
! AAGAAGAGATTTTCATGGTT+CGG + chr3_4:6852568-6852587 Msa0487720:CDS 30.0%
!! AAAACTTGTTGTCTAGTCAA+TGG - chr3_4:6852759-6852778 None:intergenic 30.0%
GATTGAAATCTATTGTATGG+TGG + chr3_4:6852839-6852858 Msa0487720:intron 30.0%
!!! GGTGATTTTCAATTTTTAGC+AGG + chr3_4:6852860-6852879 Msa0487720:intron 30.0%
!!! TTTTCAATTTTTAGCAGGAG+AGG + chr3_4:6852865-6852884 Msa0487720:intron 30.0%
!! TGGTGTGTTTTTACTGATTA+TGG + chr3_4:6852974-6852993 Msa0487720:intron 30.0%
! AAAGAATTTTTACTCGTCGT+GGG + chr3_4:6853098-6853117 Msa0487720:CDS 30.0%
! AAACTTTCAAAGAAAGGTGT+TGG + chr3_4:6853169-6853188 Msa0487720:CDS 30.0%
!! AACTTTCAAAGAAAGGTGTT+GGG + chr3_4:6853170-6853189 Msa0487720:CDS 30.0%
!!! CATACAGAAAAGCATTTTAC+AGG - chr3_4:6853262-6853281 None:intergenic 30.0%
TCAGGCTCTTAAAATATTTG+TGG + chr3_4:6853312-6853331 Msa0487720:exon 30.0%
TTCAGAGTTTATTGCATCAA+TGG + chr3_4:6853389-6853408 Msa0487720:intron 30.0%
TCAGAGTTTATTGCATCAAT+GGG + chr3_4:6853390-6853409 Msa0487720:intron 30.0%
!!! CTTTTCTTTTGGTTTTCAAC+AGG - chr3_4:6853653-6853672 None:intergenic 30.0%
!! AGTGAGCTTTAAGATGTTAA+AGG + chr3_4:6853894-6853913 Msa0487720:intron 30.0%
CTTGTATGTAAAACATCCAA+AGG + chr3_4:6853975-6853994 Msa0487720:intron 30.0%
CGAAAGTCTAAATAAACCTT+TGG - chr3_4:6853994-6854013 None:intergenic 30.0%
ACAACTTTGCAAACAGATTA+TGG + chr3_4:6854091-6854110 Msa0487720:intron 30.0%
ATCAACATGGTTAACAATGT+CGG - chr3_4:6854446-6854465 None:intergenic 30.0%
ACATTGTTAACCATGTTGAT+GGG + chr3_4:6854446-6854465 Msa0487720:three_prime_UTR 30.0%
! TCGTGTCTTTTCGAATATTT+TGG + chr3_4:6854486-6854505 Msa0487720:three_prime_UTR 30.0%
!! TTTTGGGAAATGTTTGTGTT+TGG + chr3_4:6854509-6854528 Msa0487720:three_prime_UTR 30.0%
! GGAATTTAGCTGTATAGTTT+TGG + chr3_4:6854530-6854549 Msa0487720:three_prime_UTR 30.0%
CTAAATGATTCACTTTCCTA+TGG - chr3_4:6854562-6854581 None:intergenic 30.0%
AGGAAAGTGAATCATTTAGT+AGG + chr3_4:6854563-6854582 Msa0487720:three_prime_UTR 30.0%
TGAATCATTTAGTAGGTGTT+TGG + chr3_4:6854570-6854589 Msa0487720:three_prime_UTR 30.0%
! TTTAGGGTGAAGCTAAAAAT+TGG - chr3_4:6854639-6854658 None:intergenic 30.0%
TTTGACATATATAGTCGAGT+AGG + chr3_4:6854711-6854730 Msa0487720:three_prime_UTR 30.0%
TTGACATATATAGTCGAGTA+GGG + chr3_4:6854712-6854731 Msa0487720:three_prime_UTR 30.0%
ATAGGATGTTAACATGTCTT+CGG + chr3_4:6854812-6854831 Msa0487720:three_prime_UTR 30.0%
AGCACAACACAATACAAACT+GGG - chr3_4:6844603-6844622 None:intergenic 35.0%
CTGAAAAAGAAGAACGAAAG+AGG + chr3_4:6844621-6844640 Msa0487720:five_prime_UTR 35.0%
AGAGAGAACAATTTCGAAGT+TGG + chr3_4:6844650-6844669 Msa0487720:five_prime_UTR 35.0%
GAAGAAGAAGAAGAAGATGA+AGG + chr3_4:6844683-6844702 Msa0487720:exon 35.0%
GAAGAACGAAAGTAGTGATA+CGG + chr3_4:6844721-6844740 Msa0487720:CDS 35.0%
ATCGATGTGTTGAATGAGAT+CGG - chr3_4:6844772-6844791 None:intergenic 35.0%
!!! TGATGATGTTTTCGAGTTTG+CGG + chr3_4:6845558-6845577 Msa0487720:CDS 35.0%
! CAATATGGAACGTAGCTTTT+AGG + chr3_4:6845697-6845716 Msa0487720:intron 35.0%
!!! TTTTAGGGCATGTTTGGATT+GGG + chr3_4:6845713-6845732 Msa0487720:intron 35.0%
CGTGAAGGGACTATATATAA+AGG + chr3_4:6846301-6846320 Msa0487720:CDS 35.0%
! AGAACGCTTTTATATCTCGA+TGG - chr3_4:6846352-6846371 None:intergenic 35.0%
CGTTCTAATGCTAATTGTCT+AGG + chr3_4:6846366-6846385 Msa0487720:intron 35.0%
! TCCAATTGTATTTCTGCACT+CGG - chr3_4:6846497-6846516 None:intergenic 35.0%
! CAAGCTGGTTAGTTATATGT+AGG + chr3_4:6846623-6846642 Msa0487720:intron 35.0%
! TCATTTTCTCCTCCTTTCTA+GGG + chr3_4:6846667-6846686 Msa0487720:intron 35.0%
GTCTTTCTTACTCGAATTCA+AGG - chr3_4:6846900-6846919 None:intergenic 35.0%
! ACCTCTTGTTTAAATTCTCG+AGG + chr3_4:6847046-6847065 Msa0487720:intron 35.0%
TCCTCGAGAATTTAAACAAG+AGG - chr3_4:6847050-6847069 None:intergenic 35.0%
! ACTTGATAACAATGTAGGAC+AGG - chr3_4:6847226-6847245 None:intergenic 35.0%
! CTGCTACTTGATAACAATGT+AGG - chr3_4:6847231-6847250 None:intergenic 35.0%
CAACACATAGCATAACTACT+TGG + chr3_4:6847449-6847468 Msa0487720:intron 35.0%
TCATATGACTTATATGAGGG+AGG + chr3_4:6847480-6847499 Msa0487720:intron 35.0%
GAGCAACTAAAACTTTGGAT+TGG + chr3_4:6847526-6847545 Msa0487720:intron 35.0%
AGTATAGAGAGCTAACAAAG+GGG - chr3_4:6847703-6847722 None:intergenic 35.0%
ATTATGCCTTCACATGATTG+TGG + chr3_4:6847818-6847837 Msa0487720:intron 35.0%
TTAAAGCCACAATCATGTGA+AGG - chr3_4:6847827-6847846 None:intergenic 35.0%
AAACTGTCTGTGAAATGGTT+AGG + chr3_4:6848345-6848364 Msa0487720:intron 35.0%
AACTGTCTGTGAAATGGTTA+GGG + chr3_4:6848346-6848365 Msa0487720:intron 35.0%
AATGCCTCTATAGTCAGTAA+CGG - chr3_4:6848418-6848437 None:intergenic 35.0%
TGTCGCAATATGAAAATGTG+TGG + chr3_4:6848744-6848763 Msa0487720:intron 35.0%
!!! GCACAAGAAATTTTTGAGAC+AGG - chr3_4:6848789-6848808 None:intergenic 35.0%
!! TACATTCAGTGGGTTATGTA+TGG + chr3_4:6849037-6849056 Msa0487720:intron 35.0%
!! ACATTCAGTGGGTTATGTAT+GGG + chr3_4:6849038-6849057 Msa0487720:intron 35.0%
CATTCATTTCTTGAGTGGAA+TGG - chr3_4:6849178-6849197 None:intergenic 35.0%
!! TACATTCAGTGGGTTATGTA+TGG + chr3_4:6849037-6849056 Msa0487720:intron 35.0%
!! ACATTCAGTGGGTTATGTAT+GGG + chr3_4:6849038-6849057 Msa0487720:intron 35.0%
AGATAATAGACTGGAAAGGA+GGG - chr3_4:6849379-6849398 None:intergenic 35.0%
AAGATAATAGACTGGAAAGG+AGG - chr3_4:6849380-6849399 None:intergenic 35.0%
AGAAATGTTGAGTCACTGTT+TGG - chr3_4:6849450-6849469 None:intergenic 35.0%
!!! TTTCTTTCTCTTTTTGGGTG+TGG + chr3_4:6849486-6849505 Msa0487720:intron 35.0%
AATCAAGTTAGCATGGTAGA+GGG + chr3_4:6849575-6849594 Msa0487720:intron 35.0%
AACAATCTGAAGACATACAG+GGG - chr3_4:6849615-6849634 None:intergenic 35.0%
CAAACAATCTGAAGACATAC+AGG - chr3_4:6849617-6849636 None:intergenic 35.0%
AAAACTGAAGACAGTGAACT+TGG - chr3_4:6849994-6850013 None:intergenic 35.0%
ACAGAGACAAAAGCTGTATA+AGG - chr3_4:6850115-6850134 None:intergenic 35.0%
GAACAGATATGATTAGGAGT+TGG - chr3_4:6850145-6850164 None:intergenic 35.0%
AGCAACGAACAGATATGATT+AGG - chr3_4:6850151-6850170 None:intergenic 35.0%
TCATATCTGTTCGTTGCTTA+TGG + chr3_4:6850153-6850172 Msa0487720:intron 35.0%
! ACTTCGCTTTATTAAGGAGT+TGG - chr3_4:6850334-6850353 None:intergenic 35.0%
AATCATATGAGGAGAAACTG+GGG + chr3_4:6850497-6850516 Msa0487720:intron 35.0%
AATATATAGATGGCTTCCTC+TGG + chr3_4:6850597-6850616 Msa0487720:intron 35.0%
AGGATAGCCTCAAAATCAAA+CGG - chr3_4:6850826-6850845 None:intergenic 35.0%
GATAGGAAAAAATGCACATG+AGG - chr3_4:6850846-6850865 None:intergenic 35.0%
CATATGAAGGTCGTATAGAT+AGG - chr3_4:6850863-6850882 None:intergenic 35.0%
!! TCATGGAGAAAGTGTGATTT+TGG - chr3_4:6850942-6850961 None:intergenic 35.0%
!! AAGAAGCAAGCTTTATTGAG+TGG + chr3_4:6851108-6851127 Msa0487720:intron 35.0%
AGTCTCAACAACTTCATTCA+TGG - chr3_4:6851137-6851156 None:intergenic 35.0%
GGTTGCATAGTGAATTATTC+TGG + chr3_4:6851167-6851186 Msa0487720:intron 35.0%
! CTTAACGGTGTTAGAATTCA+AGG + chr3_4:6851312-6851331 Msa0487720:intron 35.0%
! TGCTTTCTGAAGAATAAAGG+GGG + chr3_4:6851343-6851362 Msa0487720:intron 35.0%
CTTCACTTCTTCAGTATAGT+TGG - chr3_4:6851441-6851460 None:intergenic 35.0%
GTTTAAAGGTTTGGAAAAGG+TGG - chr3_4:6851504-6851523 None:intergenic 35.0%
AAAAAGATCCTCCTTCTGAA+AGG + chr3_4:6851876-6851895 Msa0487720:CDS 35.0%
ACTCCAATGTTAGATAGATC+GGG - chr3_4:6852081-6852100 None:intergenic 35.0%
GAACTTTCTATGGAACTTTC+AGG + chr3_4:6852232-6852251 Msa0487720:intron 35.0%
!!! CTGTTTTGAAGTAGTTGGAA+TGG - chr3_4:6852306-6852325 None:intergenic 35.0%
!!! TGGTTCTGTTTTGAAGTAGT+TGG - chr3_4:6852311-6852330 None:intergenic 35.0%
! TCTTAACTTCTGAGAATGGA+AGG + chr3_4:6852429-6852448 Msa0487720:CDS 35.0%
! ATTCTGAAGGGGAATCTAAA+AGG + chr3_4:6852525-6852544 Msa0487720:CDS 35.0%
! TTCTGAAGGGGAATCTAAAA+GGG + chr3_4:6852526-6852545 Msa0487720:CDS 35.0%
! AGAAGAGATTTTCATGGTTC+GGG + chr3_4:6852569-6852588 Msa0487720:CDS 35.0%
AGAAAGACGTACTAGAAACA+AGG + chr3_4:6852607-6852626 Msa0487720:CDS 35.0%
TAGAATGTGAAGAATCGGAA+CGG - chr3_4:6852667-6852686 None:intergenic 35.0%
! TCAACTGATTCAGGATATGA+TGG - chr3_4:6852728-6852747 None:intergenic 35.0%
TCATATCCTGAATCAGTTGA+AGG + chr3_4:6852728-6852747 Msa0487720:CDS 35.0%
AAAATGCTTATTCGGGAAAC+AGG + chr3_4:6852894-6852913 Msa0487720:CDS 35.0%
! CAAAGAATTTTTACTCGTCG+TGG + chr3_4:6853097-6853116 Msa0487720:CDS 35.0%
! AAGAATTTTTACTCGTCGTG+GGG + chr3_4:6853099-6853118 Msa0487720:CDS 35.0%
CCATCATCCTTCACTATATA+GGG - chr3_4:6853127-6853146 None:intergenic 35.0%
ACCATCATCCTTCACTATAT+AGG - chr3_4:6853128-6853147 None:intergenic 35.0%
GAAGGGAAACTTTCAAAGAA+AGG + chr3_4:6853163-6853182 Msa0487720:CDS 35.0%
TCTGTATGCAGAAACAAGTT+TGG + chr3_4:6853274-6853293 Msa0487720:intron 35.0%
CTGTATGCAGAAACAAGTTT+GGG + chr3_4:6853275-6853294 Msa0487720:intron 35.0%
CAGAGTTTATTGCATCAATG+GGG + chr3_4:6853391-6853410 Msa0487720:intron 35.0%
AGAGTTTATTGCATCAATGG+GGG + chr3_4:6853392-6853411 Msa0487720:intron 35.0%
GAGTTAGGAACAATAGATCA+AGG - chr3_4:6853572-6853591 None:intergenic 35.0%
! ACTTTGGATGTTTTACACAC+AGG + chr3_4:6853869-6853888 Msa0487720:intron 35.0%
TTGCATTCCTTCAATTCTAC+AGG - chr3_4:6854382-6854401 None:intergenic 35.0%
TTCGGTAAATAGTCATGTCA+AGG - chr3_4:6854417-6854436 None:intergenic 35.0%
! TAACAATGTCGGTCTGTTTT+CGG - chr3_4:6854435-6854454 None:intergenic 35.0%
GACATTGTTAACCATGTTGA+TGG + chr3_4:6854445-6854464 Msa0487720:three_prime_UTR 35.0%
AAAAGACACGAACCATACAA+GGG - chr3_4:6854477-6854496 None:intergenic 35.0%
!!! ATAGTTTTGGTACTTGCCAT+AGG + chr3_4:6854543-6854562 Msa0487720:three_prime_UTR 35.0%
!!! TTTTAGCTTCACCCTAAATG+TGG + chr3_4:6854641-6854660 Msa0487720:three_prime_UTR 35.0%
! TTTAGCTTCACCCTAAATGT+GGG + chr3_4:6854642-6854661 Msa0487720:three_prime_UTR 35.0%
GGAACAAACACAATTTAGTC+CGG + chr3_4:6854684-6854703 Msa0487720:three_prime_UTR 35.0%
AAAAAAGAAGTCCCTCATCT+GGG - chr3_4:6854845-6854864 None:intergenic 35.0%
TAAAAAAGAAGTCCCTCATC+TGG - chr3_4:6854846-6854865 None:intergenic 35.0%
AAATGATAAGGAATGGCATG+CGG + chr3_4:6854881-6854900 Msa0487720:three_prime_UTR 35.0%
CAGCACAACACAATACAAAC+TGG - chr3_4:6844604-6844623 None:intergenic 40.0%
GTGTTGAATGAGATCGGATT+CGG - chr3_4:6844766-6844785 None:intergenic 40.0%
! AGTGATAGCGAGAAGAGAAA+CGG - chr3_4:6844797-6844816 None:intergenic 40.0%
AGAGAAGAAGAAGAAGAACC+TGG - chr3_4:6844844-6844863 None:intergenic 40.0%
GCAAACTCGAAAACATCATC+AGG - chr3_4:6845559-6845578 None:intergenic 40.0%
GAGTTTGCGGAGTTCTTTAA+TGG + chr3_4:6845571-6845590 Msa0487720:CDS 40.0%
! CACGTTTTCGTTAACGAGAA+AGG + chr3_4:6845595-6845614 Msa0487720:CDS 40.0%
!!! CTTTTAGGGCATGTTTGGAT+TGG + chr3_4:6845712-6845731 Msa0487720:intron 40.0%
TGGACACCTGATTGAATATC+AGG - chr3_4:6846214-6846233 None:intergenic 40.0%
ACTCAACTACTGCTTTATGC+TGG - chr3_4:6846234-6846253 None:intergenic 40.0%
!! GAGGCTTTGAAATGAGTTTG+AGG - chr3_4:6846463-6846482 None:intergenic 40.0%
TCCGAGTGCAGAAATACAAT+TGG + chr3_4:6846493-6846512 Msa0487720:CDS 40.0%
!! CAAATGTGTTTTGAGCAAGC+TGG + chr3_4:6846608-6846627 Msa0487720:intron 40.0%
GGAGGAGAAAATGAGACAAA+TGG - chr3_4:6846661-6846680 None:intergenic 40.0%
! CTCATTTTCTCCTCCTTTCT+AGG + chr3_4:6846666-6846685 Msa0487720:intron 40.0%
! CATTTTCTCCTCCTTTCTAG+GGG + chr3_4:6846668-6846687 Msa0487720:intron 40.0%
TGACGTATATATGCCATCAG+GGG - chr3_4:6846720-6846739 None:intergenic 40.0%
CTGACGTATATATGCCATCA+GGG - chr3_4:6846721-6846740 None:intergenic 40.0%
TCTGACGTATATATGCCATC+AGG - chr3_4:6846722-6846741 None:intergenic 40.0%
GTCCACTGGTAAATGATTCT+GGG + chr3_4:6846760-6846779 Msa0487720:intron 40.0%
GTGTTGAATGAGAGAGAAAG+AGG + chr3_4:6847083-6847102 Msa0487720:intron 40.0%
TTGTTATCAAGTAGCAGCCA+TGG + chr3_4:6847234-6847253 Msa0487720:intron 40.0%
!! AGAATTTTGGCCTTCTGCTA+TGG + chr3_4:6847356-6847375 Msa0487720:intron 40.0%
! TCTGTGATATGGATTGCAGA+TGG - chr3_4:6847386-6847405 None:intergenic 40.0%
GTATAGAGAGCTAACAAAGG+GGG - chr3_4:6847702-6847721 None:intergenic 40.0%
! TTTTGTTCCTTCATTGGGTC+TGG + chr3_4:6847723-6847742 Msa0487720:intron 40.0%
AAATTCACCAGACCCAATGA+AGG - chr3_4:6847733-6847752 None:intergenic 40.0%
CTTTAATCTTCGACTCCTGT+TGG + chr3_4:6847841-6847860 Msa0487720:intron 40.0%
AATACTCCACATCTTGTGTC+AGG + chr3_4:6847947-6847966 Msa0487720:intron 40.0%
ATGAAACCTGACACAAGATG+TGG - chr3_4:6847956-6847975 None:intergenic 40.0%
CATCTTGTGTCAGGTTTCAT+CGG + chr3_4:6847956-6847975 Msa0487720:intron 40.0%
ACTGTCTGTGAAATGGTTAG+GGG + chr3_4:6848347-6848366 Msa0487720:intron 40.0%
ATGTACATTCCCTTCTTGAG+TGG - chr3_4:6849022-6849041 None:intergenic 40.0%
AGAAGGGAATGTACATTCAG+TGG + chr3_4:6849026-6849045 Msa0487720:intron 40.0%
GAAGGGAATGTACATTCAGT+GGG + chr3_4:6849027-6849046 Msa0487720:intron 40.0%
!! CATTCAGTGGGTTATGTATG+GGG + chr3_4:6849039-6849058 Msa0487720:intron 40.0%
ATGTACATTCCCTTCTTGAG+TGG - chr3_4:6849022-6849041 None:intergenic 40.0%
AGAAGGGAATGTACATTCAG+TGG + chr3_4:6849026-6849045 Msa0487720:intron 40.0%
GAAGGGAATGTACATTCAGT+GGG + chr3_4:6849027-6849046 Msa0487720:intron 40.0%
!! CATTCAGTGGGTTATGTATG+GGG + chr3_4:6849039-6849058 Msa0487720:intron 40.0%
TGGGTTCAATCAAGTTAGCA+TGG + chr3_4:6849568-6849587 Msa0487720:intron 40.0%
CAATCAAGTTAGCATGGTAG+AGG + chr3_4:6849574-6849593 Msa0487720:intron 40.0%
TGGTTGTCAGTATGTTCAGA+AGG + chr3_4:6849719-6849738 Msa0487720:intron 40.0%
AGACAAATCTGCCTTTACTG+TGG + chr3_4:6849776-6849795 Msa0487720:CDS 40.0%
TCATGTGAATATCTCTGGTG+TGG + chr3_4:6849906-6849925 Msa0487720:intron 40.0%
CAGTGAACTTGGCATATACA+AGG - chr3_4:6849983-6850002 None:intergenic 40.0%
TTCCGAGAGTCTACAGAAAT+TGG + chr3_4:6850191-6850210 Msa0487720:intron 40.0%
CACCAATTTCTGTAGACTCT+CGG - chr3_4:6850196-6850215 None:intergenic 40.0%
TACTAGCACACTCTACTAGT+GGG - chr3_4:6850364-6850383 None:intergenic 40.0%
GTGAGTGCAATTTACCCTTA+AGG - chr3_4:6850688-6850707 None:intergenic 40.0%
TAGCCTCAAAATCAAACGGA+CGG - chr3_4:6850822-6850841 None:intergenic 40.0%
GCTTGTAAAACCTTGAGTCA+TGG - chr3_4:6850959-6850978 None:intergenic 40.0%
TTGTTGAGACTCTCGTTGTT+TGG + chr3_4:6851146-6851165 Msa0487720:intron 40.0%
AACGAAGTAAGTGACGTATG+AGG + chr3_4:6851256-6851275 Msa0487720:intron 40.0%
GTGACGTATGAGGAGAATTA+AGG + chr3_4:6851266-6851285 Msa0487720:intron 40.0%
AAGTGACATTAGTAGACCTC+AGG + chr3_4:6851369-6851388 Msa0487720:intron 40.0%
AGTGACATTAGTAGACCTCA+GGG + chr3_4:6851370-6851389 Msa0487720:intron 40.0%
GAGCGAGGTAACAACATTTA+AGG - chr3_4:6851419-6851438 None:intergenic 40.0%
! TATACAGTGCATGGCATTGA+AGG + chr3_4:6851813-6851832 Msa0487720:CDS 40.0%
! TCCTTCTGAAAGGAAAACAG+CGG + chr3_4:6851886-6851905 Msa0487720:CDS 40.0%
AAATGGACATGAGCAAGGTA+CGG - chr3_4:6851963-6851982 None:intergenic 40.0%
AAGTGAAATGGACATGAGCA+AGG - chr3_4:6851968-6851987 None:intergenic 40.0%
TCTCCCGATCTATCTAACAT+TGG + chr3_4:6852075-6852094 Msa0487720:intron 40.0%
CTGTTTAACCATACCTTCAG+TGG - chr3_4:6852258-6852277 None:intergenic 40.0%
AATCCAGACCTTGAACCAAA+AGG - chr3_4:6852467-6852486 None:intergenic 40.0%
ATGTCTCTAGTCATGATGCT+GGG + chr3_4:6852495-6852514 Msa0487720:CDS 40.0%
AGGGGAATCTAAAAGGGATT+TGG + chr3_4:6852532-6852551 Msa0487720:CDS 40.0%
!! GATTTTCATGGTTCGGGTAT+TGG + chr3_4:6852575-6852594 Msa0487720:CDS 40.0%
! GTCATACCTTCAACTGATTC+AGG - chr3_4:6852737-6852756 None:intergenic 40.0%
CCCTATATAGTGAAGGATGA+TGG + chr3_4:6853124-6853143 Msa0487720:CDS 40.0%
TGTTGGGAATAGTACTCATG+AGG + chr3_4:6853186-6853205 Msa0487720:CDS 40.0%
TGGGTTCAGAAATCATCTTC+AGG + chr3_4:6853294-6853313 Msa0487720:CDS 40.0%
TGTAAGCACTCTTAAAGCAC+TGG - chr3_4:6854074-6854093 None:intergenic 40.0%
GCAAACAGATTATGGACACT+CGG + chr3_4:6854099-6854118 Msa0487720:intron 40.0%
ATTCCTGCTACATTGAGCTA+GGG + chr3_4:6854157-6854176 Msa0487720:three_prime_UTR 40.0%
ATTGAGCTAGGGATCTGTTT+AGG + chr3_4:6854168-6854187 Msa0487720:three_prime_UTR 40.0%
ATGAGCCTAAGCTACTTGTA+AGG + chr3_4:6854219-6854238 Msa0487720:three_prime_UTR 40.0%
ACAGACCTTACAAGTAGCTT+AGG - chr3_4:6854227-6854246 None:intergenic 40.0%
GGTAAATAGTCATGTCAAGG+AGG - chr3_4:6854414-6854433 None:intergenic 40.0%
GAAAAGACACGAACCATACA+AGG - chr3_4:6854478-6854497 None:intergenic 40.0%
TCGAGTAGGGTTTGTATGAA+AGG + chr3_4:6854725-6854744 Msa0487720:three_prime_UTR 40.0%
AATGATAAGGAATGGCATGC+GGG + chr3_4:6854882-6854901 Msa0487720:three_prime_UTR 40.0%
! AGATCGGATTCGGTTAGAGA+TGG - chr3_4:6844756-6844775 None:intergenic 45.0%
GTTTCTCTTCTCGCTATCAC+TGG + chr3_4:6844796-6844815 Msa0487720:CDS 45.0%
!!! CGTAGCTTTTAGGGCATGTT+TGG + chr3_4:6845707-6845726 Msa0487720:intron 45.0%
TCCAAAGCCGAGTACCAAAA+AGG + chr3_4:6846273-6846292 Msa0487720:CDS 45.0%
!! TCCTTTTTGGTACTCGGCTT+TGG - chr3_4:6846277-6846296 None:intergenic 45.0%
AAGCCGAGTACCAAAAAGGA+TGG + chr3_4:6846277-6846296 Msa0487720:CDS 45.0%
TTGAGGAACTCGAGATAGTC+TGG - chr3_4:6846446-6846465 None:intergenic 45.0%
GGTCCACTGGTAAATGATTC+TGG + chr3_4:6846759-6846778 Msa0487720:intron 45.0%
GTCCCAGAATCATTTACCAG+TGG - chr3_4:6846765-6846784 None:intergenic 45.0%
! TTTTCCAGAACACTCTGCCA+TGG - chr3_4:6847254-6847273 None:intergenic 45.0%
! CATCCTTCACAGATTGGTCA+TGG - chr3_4:6847292-6847311 None:intergenic 45.0%
CATGACCAATCTGTGAAGGA+TGG + chr3_4:6847290-6847309 Msa0487720:intron 45.0%
! TGGCAGCGCCATGATTTTTA+TGG + chr3_4:6847310-6847329 Msa0487720:intron 45.0%
AGATGGCAAACCATAGCAGA+AGG - chr3_4:6847369-6847388 None:intergenic 45.0%
TGGGCTGTGAATCTGTGATA+TGG - chr3_4:6847397-6847416 None:intergenic 45.0%
AGATTCACAGCCCATGCAAT+GGG + chr3_4:6847403-6847422 Msa0487720:intron 45.0%
GATCTGTGTACCCATTGCAT+GGG - chr3_4:6847416-6847435 None:intergenic 45.0%
TGATCTGTGTACCCATTGCA+TGG - chr3_4:6847417-6847436 None:intergenic 45.0%
AGTTAAGATGGTCTCCTGCT+TGG + chr3_4:6847908-6847927 Msa0487720:intron 45.0%
GTTAAGATGGTCTCCTGCTT+GGG + chr3_4:6847909-6847928 Msa0487720:intron 45.0%
ATGTCAGCATATACCCAAGC+AGG - chr3_4:6847925-6847944 None:intergenic 45.0%
TCTTCTGCCAACTCTTGTTG+CGG - chr3_4:6847982-6848001 None:intergenic 45.0%
ACGGGGATCCGAAAAGAAAA+AGG + chr3_4:6848046-6848065 Msa0487720:CDS 45.0%
CAAAGGAGGCAATAACAGCA+TGG - chr3_4:6848222-6848241 None:intergenic 45.0%
CTGTCTGTGAAATGGTTAGG+GGG + chr3_4:6848348-6848367 Msa0487720:intron 45.0%
TGATGCCATAACAGCCACTA+TGG + chr3_4:6848392-6848411 Msa0487720:intron 45.0%
ATAGTCAGTAACGGCCATAG+TGG - chr3_4:6848409-6848428 None:intergenic 45.0%
! ATGGCCGTTACTGACTATAG+AGG + chr3_4:6848411-6848430 Msa0487720:intron 45.0%
ACACCTAAAGAGGGCAAGAA+TGG + chr3_4:6848881-6848900 Msa0487720:intron 45.0%
CACCTAAAGAGGGCAAGAAT+GGG + chr3_4:6848882-6848901 Msa0487720:intron 45.0%
! ATTTTTGTGTGCAGAGCCAG+AGG - chr3_4:6848974-6848993 None:intergenic 45.0%
GCTTGAAGTCCACTCAAGAA+GGG + chr3_4:6849010-6849029 Msa0487720:intron 45.0%
GCTTGAAGTCCACTCAAGAA+GGG + chr3_4:6849010-6849029 Msa0487720:intron 45.0%
ATAGACTGGAAAGGAGGGAA+TGG - chr3_4:6849374-6849393 None:intergenic 45.0%
!! AGTCACTGTTTGGCTTTGCT+TGG - chr3_4:6849440-6849459 None:intergenic 45.0%
CATGACACACATGCGAGATT+TGG + chr3_4:6849512-6849531 Msa0487720:intron 45.0%
CGAGAGTCTACAGAAATTGG+TGG + chr3_4:6850194-6850213 Msa0487720:intron 45.0%
ACTAGCACACTCTACTAGTG+GGG - chr3_4:6850363-6850382 None:intergenic 45.0%
GTACTAGCACACTCTACTAG+TGG - chr3_4:6850365-6850384 None:intergenic 45.0%
ATATGAGGAGAAACTGGGGA+TGG + chr3_4:6850501-6850520 Msa0487720:intron 45.0%
TATGAGGAGAAACTGGGGAT+GGG + chr3_4:6850502-6850521 Msa0487720:intron 45.0%
GACTGAATCCTTGATTCCAG+AGG - chr3_4:6850616-6850635 None:intergenic 45.0%
AAAATCAAACGGACGGACGT+TGG - chr3_4:6850815-6850834 None:intergenic 45.0%
CACACTTTCTCCATGACTCA+AGG + chr3_4:6850946-6850965 Msa0487720:intron 45.0%
TTATTCTGGCAGTCCAGTCA+TGG + chr3_4:6851181-6851200 Msa0487720:intron 45.0%
! ACGGTGTTAGAATTCAAGGG+AGG + chr3_4:6851316-6851335 Msa0487720:intron 45.0%
GTGACATTAGTAGACCTCAG+GGG + chr3_4:6851371-6851390 Msa0487720:intron 45.0%
AATTACATTCACCTCCCCTG+AGG - chr3_4:6851388-6851407 None:intergenic 45.0%
TCTTCAGTATAGTTGGAGCG+AGG - chr3_4:6851434-6851453 None:intergenic 45.0%
AGTCAGTGGTATTCCAGAGA+CGG - chr3_4:6851841-6851860 None:intergenic 45.0%
!! ATACCACTGACTTCTGACTC+AGG + chr3_4:6851849-6851868 Msa0487720:CDS 45.0%
TTTCCTGAGTCAGAAGTCAG+TGG - chr3_4:6851855-6851874 None:intergenic 45.0%
!! GCTGTTTTCCTTTCAGAAGG+AGG - chr3_4:6851887-6851906 None:intergenic 45.0%
! CCTTCTGAAAGGAAAACAGC+GGG + chr3_4:6851887-6851906 Msa0487720:CDS 45.0%
AATGGACATGAGCAAGGTAC+GGG - chr3_4:6851962-6851981 None:intergenic 45.0%
TGTTGTCCTTCCCTGAAAGT+TGG + chr3_4:6852153-6852172 Msa0487720:intron 45.0%
! TCCTTCCCTGAAAGTTGGTT+TGG + chr3_4:6852158-6852177 Msa0487720:intron 45.0%
TCCAAACCAACTTTCAGGGA+AGG - chr3_4:6852162-6852181 None:intergenic 45.0%
CTGCTCCAAACCAACTTTCA+GGG - chr3_4:6852166-6852185 None:intergenic 45.0%
ACTGCTCCAAACCAACTTTC+AGG - chr3_4:6852167-6852186 None:intergenic 45.0%
GCAGTAGATGTAGACTGACT+CGG - chr3_4:6852392-6852411 None:intergenic 45.0%
CATGTCTCTAGTCATGATGC+TGG + chr3_4:6852494-6852513 Msa0487720:CDS 45.0%
CTGGGCATGCTAATTCTGAA+GGG + chr3_4:6852513-6852532 Msa0487720:CDS 45.0%
! TGGGCATGCTAATTCTGAAG+GGG + chr3_4:6852514-6852533 Msa0487720:CDS 45.0%
GACGTACTAGAAACAAGGAC+AGG + chr3_4:6852612-6852631 Msa0487720:CDS 45.0%
GGTGAATTCTCAACTTCTGC+AGG + chr3_4:6852920-6852939 Msa0487720:CDS 45.0%
GAATTCTCAACTTCTGCAGG+TGG + chr3_4:6852923-6852942 Msa0487720:CDS 45.0%
AGTAGTCCCTCTGTTGAGAA+TGG + chr3_4:6852950-6852969 Msa0487720:CDS 45.0%
CACCAACCATTCTCAACAGA+GGG - chr3_4:6852959-6852978 None:intergenic 45.0%
ACACCAACCATTCTCAACAG+AGG - chr3_4:6852960-6852979 None:intergenic 45.0%
ACAGGGCAATTCAAGCAAAG+AGG - chr3_4:6853244-6853263 None:intergenic 45.0%
GAGCTCAACTGACTGTTGAA+TGG + chr3_4:6853527-6853546 Msa0487720:intron 45.0%
CATTCCTGCTACATTGAGCT+AGG + chr3_4:6854156-6854175 Msa0487720:three_prime_UTR 45.0%
TCAATTCTACAGGCTCTGTC+AGG - chr3_4:6854372-6854391 None:intergenic 45.0%
GACAGAGCCTGTAGAATTGA+AGG + chr3_4:6854372-6854391 Msa0487720:three_prime_UTR 45.0%
ACCAACGGAACCCACATTTA+GGG - chr3_4:6854655-6854674 None:intergenic 45.0%
AACCAACGGAACCCACATTT+AGG - chr3_4:6854656-6854675 None:intergenic 45.0%
! TGTTCCGCGTTTAGAACCAA+CGG - chr3_4:6854670-6854689 None:intergenic 45.0%
!!! ATGATTATTATTTTTTAATA+AGG + chr3_4:6846414-6846433 Msa0487720:intron 5.0%
! GAAGAAGATGAAGGCGCGTT+CGG + chr3_4:6844692-6844711 Msa0487720:exon 50.0%
! ATGAAGGCGCGTTCGGAAAA+GGG + chr3_4:6844699-6844718 Msa0487720:CDS 50.0%
! TCGGATTCGGTTAGAGATGG+TGG - chr3_4:6844753-6844772 None:intergenic 50.0%
!!! CACTGGTTCGTTTTCCGTTC+CGG + chr3_4:6844813-6844832 Msa0487720:CDS 50.0%
!! GAAGAAGAACCTGGTGTTGC+CGG - chr3_4:6844835-6844854 None:intergenic 50.0%
!! CGGCCATCCTTTTTGGTACT+CGG - chr3_4:6846283-6846302 None:intergenic 50.0%
ACCAAAAAGGATGGCCGTGA+AGG + chr3_4:6846286-6846305 Msa0487720:CDS 50.0%
CCAAAAAGGATGGCCGTGAA+GGG + chr3_4:6846287-6846306 Msa0487720:CDS 50.0%
GCACTCGGAAGATGTTCTTG+AGG - chr3_4:6846482-6846501 None:intergenic 50.0%
AGAAAGGAAGCTGAGCAAGC+TGG + chr3_4:6846518-6846537 Msa0487720:CDS 50.0%
TTCCTTGCTAGCCCCTAGAA+AGG - chr3_4:6846682-6846701 None:intergenic 50.0%
ACCTATTGTCACACCCCTGA+TGG + chr3_4:6846704-6846723 Msa0487720:CDS 50.0%
! CCTTCACAGATTGGTCATGG+CGG - chr3_4:6847289-6847308 None:intergenic 50.0%
CAGATTCACAGCCCATGCAA+TGG + chr3_4:6847402-6847421 Msa0487720:intron 50.0%
AGAGAGCTAACAAAGGGGGA+AGG - chr3_4:6847698-6847717 None:intergenic 50.0%
ATCCCCGTCTGGTATTACTG+GGG - chr3_4:6848034-6848053 None:intergenic 50.0%
GATCCCCGTCTGGTATTACT+GGG - chr3_4:6848035-6848054 None:intergenic 50.0%
! TTTCTTTTCGGATCCCCGTC+TGG - chr3_4:6848045-6848064 None:intergenic 50.0%
AACGGCCATAGTGGCTGTTA+TGG - chr3_4:6848400-6848419 None:intergenic 50.0%
CACCCATTCTTGCCCTCTTT+AGG - chr3_4:6848887-6848906 None:intergenic 50.0%
GGCTTGAAGTCCACTCAAGA+AGG + chr3_4:6849009-6849028 Msa0487720:intron 50.0%
GGTTATGTATGGGGCCAAGT+GGG + chr3_4:6849048-6849067 Msa0487720:intron 50.0%
GGCTTGAAGTCCACTCAAGA+AGG + chr3_4:6849009-6849028 Msa0487720:intron 50.0%
GGTTATGTATGGGGCCAAGT+GGG + chr3_4:6849048-6849067 Msa0487720:intron 50.0%
CAAGTTAGCATGGTAGAGGG+AGG + chr3_4:6849578-6849597 Msa0487720:intron 50.0%
ATGAGGAGAAACTGGGGATG+GGG + chr3_4:6850503-6850522 Msa0487720:intron 50.0%
GGGGAGTCATTCATTCTCAG+AGG + chr3_4:6850522-6850541 Msa0487720:intron 50.0%
!! GATGGCTTCCTCTGGAATCA+AGG + chr3_4:6850605-6850624 Msa0487720:intron 50.0%
!! CGTCCGTCCGTTTGATTTTG+AGG + chr3_4:6850816-6850835 Msa0487720:intron 50.0%
ACATTAGTAGACCTCAGGGG+AGG + chr3_4:6851374-6851393 Msa0487720:intron 50.0%
!! CCCGCTGTTTTCCTTTCAGA+AGG - chr3_4:6851890-6851909 None:intergenic 50.0%
CAGCGGGAAATTCCCAAAGT+AGG + chr3_4:6851903-6851922 Msa0487720:intron 50.0%
ATGAGCAAGGTACGGGTGAA+GGG - chr3_4:6851955-6851974 None:intergenic 50.0%
TGGAACTTTCAGGCCACTGA+AGG + chr3_4:6852242-6852261 Msa0487720:intron 50.0%
CTTTCAGGCCACTGAAGGTA+TGG + chr3_4:6852247-6852266 Msa0487720:intron 50.0%
! CAGAACCAAAAGCGTGAAGC+CGG + chr3_4:6852323-6852342 Msa0487720:CDS 50.0%
AAGCCGGTGGAAGATTGATC+AGG + chr3_4:6852339-6852358 Msa0487720:CDS 50.0%
GCTCCTGATCAATCTTCCAC+CGG - chr3_4:6852345-6852364 None:intergenic 50.0%
CTTGAACCAAAAGGACGAGG+TGG - chr3_4:6852458-6852477 None:intergenic 50.0%
!!! CACCTCGTCCTTTTGGTTCA+AGG + chr3_4:6852456-6852475 Msa0487720:CDS 50.0%
GACCTTGAACCAAAAGGACG+AGG - chr3_4:6852461-6852480 None:intergenic 50.0%
!!! CGTCCTTTTGGTTCAAGGTC+TGG + chr3_4:6852461-6852480 Msa0487720:CDS 50.0%
GCTGGGCATGCTAATTCTGA+AGG + chr3_4:6852512-6852531 Msa0487720:CDS 50.0%
TGAGCTCTCATCATCCTCAC+TGG + chr3_4:6852691-6852710 Msa0487720:CDS 50.0%
GCTTATTCGGGAAACAGGAG+TGG + chr3_4:6852899-6852918 Msa0487720:CDS 50.0%
GTCCCTCTGTTGAGAATGGT+TGG + chr3_4:6852954-6852973 Msa0487720:intron 50.0%
TGGGGCTCCCTATATAGTGA+AGG + chr3_4:6853117-6853136 Msa0487720:CDS 50.0%
GTGCAGTCAGTTCGAGTGAA+GGG + chr3_4:6853146-6853165 Msa0487720:CDS 50.0%
GATCCCTAGCTCAATGTAGC+AGG - chr3_4:6854163-6854182 None:intergenic 50.0%
ACATCATCCGCGTCCAATTC+AGG + chr3_4:6854191-6854210 Msa0487720:three_prime_UTR 50.0%
ATGTCGACCTGAATTGGACG+CGG - chr3_4:6854201-6854220 None:intergenic 50.0%
AGGCTCATGTCGACCTGAAT+TGG - chr3_4:6854207-6854226 None:intergenic 50.0%
AAGGGTCTAGCCCATCAACA+TGG - chr3_4:6854459-6854478 None:intergenic 50.0%
!! TGATGGGCTAGACCCTTGTA+TGG + chr3_4:6854462-6854481 Msa0487720:three_prime_UTR 50.0%
ACCCTAAATGTGGGTTCCGT+TGG + chr3_4:6854651-6854670 Msa0487720:three_prime_UTR 50.0%
!! GGTTCCGTTGGTTCTAAACG+CGG + chr3_4:6854663-6854682 Msa0487720:three_prime_UTR 50.0%
TTCGGTACACATCCCAGATG+AGG + chr3_4:6854830-6854849 Msa0487720:three_prime_UTR 50.0%
TCGGTACACATCCCAGATGA+GGG + chr3_4:6854831-6854850 Msa0487720:three_prime_UTR 50.0%
! GATGAAGGCGCGTTCGGAAA+AGG + chr3_4:6844698-6844717 Msa0487720:exon 55.0%
! TTTTCCGTTCCGGCAACACC+AGG + chr3_4:6844823-6844842 Msa0487720:CDS 55.0%
!! AGAACCTGGTGTTGCCGGAA+CGG - chr3_4:6844830-6844849 None:intergenic 55.0%
!! GGCTTTGGAACACGCTGAGA+AGG - chr3_4:6846262-6846281 None:intergenic 55.0%
! CCCTTCACGGCCATCCTTTT+TGG - chr3_4:6846290-6846309 None:intergenic 55.0%
CTTGCTAGCCCCTAGAAAGG+AGG - chr3_4:6846679-6846698 None:intergenic 55.0%
! CTCCTTTCTAGGGGCTAGCA+AGG + chr3_4:6846677-6846696 Msa0487720:intron 55.0%
! GCCATCAGGGGTGTGACAAT+AGG - chr3_4:6846708-6846727 None:intergenic 55.0%
! CAGAAGCGTGCTGTTGACAG+TGG + chr3_4:6846738-6846757 Msa0487720:CDS 55.0%
TGCTGTTGACAGTGGTCCAC+TGG + chr3_4:6846746-6846765 Msa0487720:CDS 55.0%
! CACAGATTGGTCATGGCGGA+TGG - chr3_4:6847285-6847304 None:intergenic 55.0%
CCGCCATGACCAATCTGTGA+AGG + chr3_4:6847286-6847305 Msa0487720:intron 55.0%
CGCTGCCATCCTTCACAGAT+TGG - chr3_4:6847298-6847317 None:intergenic 55.0%
TCATCGGCCGCAACAAGAGT+TGG + chr3_4:6847972-6847991 Msa0487720:CDS 55.0%
AGAGCCAGAGCTGCTATGCA+AGG + chr3_4:6847999-6848018 Msa0487720:CDS 55.0%
CTTGCCTTGCATAGCAGCTC+TGG - chr3_4:6848006-6848025 None:intergenic 55.0%
CTGGCCCCAGTAATACCAGA+CGG + chr3_4:6848027-6848046 Msa0487720:CDS 55.0%
TGGCCCCAGTAATACCAGAC+GGG + chr3_4:6848028-6848047 Msa0487720:CDS 55.0%
GGATCCCCGTCTGGTATTAC+TGG - chr3_4:6848036-6848055 None:intergenic 55.0%
CCTTAGCTGCGGGTGTTTGT+GGG - chr3_4:6848931-6848950 None:intergenic 55.0%
TCCTTAGCTGCGGGTGTTTG+TGG - chr3_4:6848932-6848951 None:intergenic 55.0%
ACAAACACCCGCAGCTAAGG+AGG + chr3_4:6848931-6848950 Msa0487720:intron 55.0%
CAAACACCCGCAGCTAAGGA+GGG + chr3_4:6848932-6848951 Msa0487720:intron 55.0%
AAACACCCGCAGCTAAGGAG+GGG + chr3_4:6848933-6848952 Msa0487720:intron 55.0%
!! GACTGGCCAGTTTTAGCCTC+TGG + chr3_4:6848955-6848974 Msa0487720:intron 55.0%
GCAGAGCCAGAGGCTAAAAC+TGG - chr3_4:6848964-6848983 None:intergenic 55.0%
GGGTTATGTATGGGGCCAAG+TGG + chr3_4:6849047-6849066 Msa0487720:intron 55.0%
ATGTATGGGGCCAAGTGGGT+TGG + chr3_4:6849052-6849071 Msa0487720:intron 55.0%
! TGTATGGGGCCAAGTGGGTT+GGG + chr3_4:6849053-6849072 Msa0487720:intron 55.0%
GGGTTATGTATGGGGCCAAG+TGG + chr3_4:6849047-6849066 Msa0487720:intron 55.0%
ATGTATGGGGCCAAGTGGGT+TGG + chr3_4:6849052-6849071 Msa0487720:intron 55.0%
! TGTATGGGGCCAAGTGGGTT+GGG + chr3_4:6849053-6849072 Msa0487720:intron 55.0%
AAGAATGGTCCTCACGCCTG+GGG - chr3_4:6849803-6849822 None:intergenic 55.0%
GAAGAATGGTCCTCACGCCT+GGG - chr3_4:6849804-6849823 None:intergenic 55.0%
AGAAGAATGGTCCTCACGCC+TGG - chr3_4:6849805-6849824 None:intergenic 55.0%
GGACGTTGGTCAGAAGGGAT+GGG - chr3_4:6850801-6850820 None:intergenic 55.0%
TTCTGGCAGTCCAGTCATGG+AGG + chr3_4:6851184-6851203 Msa0487720:intron 55.0%
GTCCAGTCATGGAGGAGAGT+TGG + chr3_4:6851192-6851211 Msa0487720:intron 55.0%
TGCCAACTCTCCTCCATGAC+TGG - chr3_4:6851197-6851216 None:intergenic 55.0%
! GGCATTGAAGGTTCCGTCTC+TGG + chr3_4:6851825-6851844 Msa0487720:CDS 55.0%
CATGAGCAAGGTACGGGTGA+AGG - chr3_4:6851956-6851975 None:intergenic 55.0%
! AACCAAAAGCGTGAAGCCGG+TGG + chr3_4:6852326-6852345 Msa0487720:CDS 55.0%
!!! TTCCACCGGCTTCACGCTTT+TGG - chr3_4:6852331-6852350 None:intergenic 55.0%
AACAAGGACAGGCCTGATCG+TGG + chr3_4:6852623-6852642 Msa0487720:CDS 55.0%
ACAGGCCTGATCGTGGTGTT+TGG + chr3_4:6852630-6852649 Msa0487720:CDS 55.0%
CAGGCCTGATCGTGGTGTTT+GGG + chr3_4:6852631-6852650 Msa0487720:CDS 55.0%
GAAGAATCGGAACGGCGAAG+AGG - chr3_4:6852659-6852678 None:intergenic 55.0%
GGTGCAGTCAGTTCGAGTGA+AGG + chr3_4:6853145-6853164 Msa0487720:CDS 55.0%
AGGCTCTGTCAGGCAACAAC+TGG - chr3_4:6854362-6854381 None:intergenic 55.0%
! GCAGCCATGGCAGAGTGTTC+TGG + chr3_4:6847247-6847266 Msa0487720:intron 60.0%
GCTGCTATGCAAGGCAAGCC+TGG + chr3_4:6848008-6848027 Msa0487720:CDS 60.0%
CGTCTGGTATTACTGGGGCC+AGG - chr3_4:6848029-6848048 None:intergenic 60.0%
GGCCCCAGTAATACCAGACG+GGG + chr3_4:6848029-6848048 Msa0487720:CDS 60.0%
CCCACAAACACCCGCAGCTA+AGG + chr3_4:6848928-6848947 Msa0487720:intron 60.0%
AGACCACAGCCCAACCCACT+TGG - chr3_4:6849065-6849084 None:intergenic 60.0%
AGACCACAGCCCAACCCACT+TGG - chr3_4:6849065-6849084 None:intergenic 60.0%
CTGCCTTTACTGTGGTCCCC+AGG + chr3_4:6849784-6849803 Msa0487720:CDS 60.0%
ACGCCTGGGGACCACAGTAA+AGG - chr3_4:6849790-6849809 None:intergenic 60.0%
CGGACGTTGGTCAGAAGGGA+TGG - chr3_4:6850802-6850821 None:intergenic 60.0%
CGGACGGACGTTGGTCAGAA+GGG - chr3_4:6850806-6850825 None:intergenic 60.0%
ACGGACGGACGTTGGTCAGA+AGG - chr3_4:6850807-6850826 None:intergenic 60.0%
! AGGCGTCCACCTCGTCCTTT+TGG + chr3_4:6852449-6852468 Msa0487720:CDS 60.0%
GGTGCCCAAACACCACGATC+AGG - chr3_4:6852638-6852657 None:intergenic 60.0%
TGGTGCAGACTGTGCCAGTG+AGG - chr3_4:6852708-6852727 None:intergenic 60.0%
CCAGTCCCCTCCTTAGCTGC+GGG - chr3_4:6848941-6848960 None:intergenic 65.0%
GCCAGTCCCCTCCTTAGCTG+CGG - chr3_4:6848942-6848961 None:intergenic 65.0%
TACTGTGGTCCCCAGGCGTG+AGG + chr3_4:6849791-6849810 Msa0487720:CDS 65.0%
CCCGCAGCTAAGGAGGGGAC+TGG + chr3_4:6848938-6848957 Msa0487720:intron 70.0%
!! GGGCCAAGTGGGTTGGGCTG+TGG + chr3_4:6849059-6849078 Msa0487720:intron 70.0%
!! GGGCCAAGTGGGTTGGGCTG+TGG + chr3_4:6849059-6849078 Msa0487720:intron 70.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 6844600 6854914 6844600 ID=Msa0487720;Name=Msa0487720
chr3_4 mRNA 6844600 6854914 6844600 ID=Msa0487720-mRNA-1;Parent=Msa0487720;Name=Msa0487720-mRNA-1;_AED=0.09;_eAED=0.09;_QI=99|1|1|1|0.84|0.78|14|709|541
chr3_4 exon 6844600 6844844 6844600 ID=Msa0487720-mRNA-1:exon:2336;Parent=Msa0487720-mRNA-1
chr3_4 exon 6845510 6845616 6845510 ID=Msa0487720-mRNA-1:exon:2337;Parent=Msa0487720-mRNA-1
chr3_4 exon 6846227 6846322 6846227 ID=Msa0487720-mRNA-1:exon:2338;Parent=Msa0487720-mRNA-1
chr3_4 exon 6846441 6846539 6846441 ID=Msa0487720-mRNA-1:exon:2339;Parent=Msa0487720-mRNA-1
chr3_4 exon 6846688 6846767 6846688 ID=Msa0487720-mRNA-1:exon:2340;Parent=Msa0487720-mRNA-1
chr3_4 exon 6847969 6848067 6847969 ID=Msa0487720-mRNA-1:exon:2341;Parent=Msa0487720-mRNA-1
chr3_4 exon 6849729 6849861 6849729 ID=Msa0487720-mRNA-1:exon:2342;Parent=Msa0487720-mRNA-1
chr3_4 exon 6851796 6851920 6851796 ID=Msa0487720-mRNA-1:exon:2343;Parent=Msa0487720-mRNA-1
chr3_4 exon 6852254 6852749 6852254 ID=Msa0487720-mRNA-1:exon:2344;Parent=Msa0487720-mRNA-1
chr3_4 exon 6852882 6852971 6852882 ID=Msa0487720-mRNA-1:exon:2345;Parent=Msa0487720-mRNA-1
chr3_4 exon 6853092 6853207 6853092 ID=Msa0487720-mRNA-1:exon:2346;Parent=Msa0487720-mRNA-1
chr3_4 exon 6853285 6853333 6853285 ID=Msa0487720-mRNA-1:exon:2347;Parent=Msa0487720-mRNA-1
chr3_4 exon 6854107 6854240 6854107 ID=Msa0487720-mRNA-1:exon:2348;Parent=Msa0487720-mRNA-1
chr3_4 exon 6854350 6854914 6854350 ID=Msa0487720-mRNA-1:exon:2349;Parent=Msa0487720-mRNA-1
chr3_4 five_prime_UTR 6844600 6844698 6844600 ID=Msa0487720-mRNA-1:five_prime_utr;Parent=Msa0487720-mRNA-1
chr3_4 CDS 6844699 6844844 6844699 ID=Msa0487720-mRNA-1:cds;Parent=Msa0487720-mRNA-1
chr3_4 CDS 6845510 6845616 6845510 ID=Msa0487720-mRNA-1:cds;Parent=Msa0487720-mRNA-1
chr3_4 CDS 6846227 6846322 6846227 ID=Msa0487720-mRNA-1:cds;Parent=Msa0487720-mRNA-1
chr3_4 CDS 6846441 6846539 6846441 ID=Msa0487720-mRNA-1:cds;Parent=Msa0487720-mRNA-1
chr3_4 CDS 6846688 6846767 6846688 ID=Msa0487720-mRNA-1:cds;Parent=Msa0487720-mRNA-1
chr3_4 CDS 6847969 6848067 6847969 ID=Msa0487720-mRNA-1:cds;Parent=Msa0487720-mRNA-1
chr3_4 CDS 6849729 6849861 6849729 ID=Msa0487720-mRNA-1:cds;Parent=Msa0487720-mRNA-1
chr3_4 CDS 6851796 6851920 6851796 ID=Msa0487720-mRNA-1:cds;Parent=Msa0487720-mRNA-1
chr3_4 CDS 6852254 6852749 6852254 ID=Msa0487720-mRNA-1:cds;Parent=Msa0487720-mRNA-1
chr3_4 CDS 6852882 6852971 6852882 ID=Msa0487720-mRNA-1:cds;Parent=Msa0487720-mRNA-1
chr3_4 CDS 6853092 6853207 6853092 ID=Msa0487720-mRNA-1:cds;Parent=Msa0487720-mRNA-1
chr3_4 CDS 6853285 6853323 6853285 ID=Msa0487720-mRNA-1:cds;Parent=Msa0487720-mRNA-1
chr3_4 three_prime_UTR 6853324 6853333 6853324 ID=Msa0487720-mRNA-1:three_prime_utr;Parent=Msa0487720-mRNA-1
chr3_4 three_prime_UTR 6854107 6854240 6854107 ID=Msa0487720-mRNA-1:three_prime_utr;Parent=Msa0487720-mRNA-1
chr3_4 three_prime_UTR 6854350 6854914 6854350 ID=Msa0487720-mRNA-1:three_prime_utr;Parent=Msa0487720-mRNA-1
Gene Sequence

>Msa0487720

ATGAAGGCGCGTTCGGAAAAGGGAAGAACGAAAGTAGTGATACGGCATTTACCACCATCTCTAACCGAATCCGATCTCATTCAACACATCGATAACCGTTTCTCTTCTCGCTATCACTGGTTCGTTTTCCGTTCCGGCAACACCAGTTATAGGAATCAAAAGTATGCGAGAGCGTATCTAGACTTCAATTCACCTGATGATGTTTTCGAGTTTGCGGAGTTCTTTAATGGACACGTTTTCGTTAACGAGAAAGGTGTCCAGCATAAAGCAGTAGTTGAGTATGCACCTTCTCAGCGTGTTCCAAAGCCGAGTACCAAAAAGGATGGCCGTGAAGGGACTATATATAAAGATCCAGACTATCTCGAGTTCCTCAAACTCATTTCAAAGCCTCAAGAACATCTTCCGAGTGCAGAAATACAATTGGAAAGAAAGGAAGCTGAGCAAGCTGGGGCTAGCAAGGAAGCACCTATTGTCACACCCCTGATGGCATATATACGTCAGAAGCGTGCTGTTGACAGTGGTCCACTGGTTTCATCGGCCGCAACAAGAGTTGGCAGAAGAGCCAGAGCTGCTATGCAAGGCAAGCCTGGCCCCAGTAATACCAGACGGGGATCCGAAAAGAAAAAGTATGTTCAGAAGGACAATGTCAAGAATGCTAATCGGAAAGATTTGAAAGACAAATCTGCCTTTACTGTGGTCCCCAGGCGTGAGGACCATTCTTCTGAATCAAGTATAAAAGGAGTTTATGAAATTGATTCTTCGCATGTGATTGATGAATATACAGTGCATGGCATTGAAGGTTCCGTCTCTGGAATACCACTGACTTCTGACTCAGGAAAGAAAAAGATCCTCCTTCTGAAAGGAAAACAGCGGGAAATTCCCAAAGCCACTGAAGGTATGGTTAAACAGCAAAATGCACAATCTGCAAATTCGCCCATTCCAACTACTTCAAAACAGAACCAAAAGCGTGAAGCCGGTGGAAGATTGATCAGGAGCATACTTCTAAATAATGAATCTCGTCCGAGTCAGTCTACATCTACTGCGCAACATAAGATTCAAATCTTAACTTCTGAGAATGGAAGGCGTCCACCTCGTCCTTTTGGTTCAAGGTCTGGATTAAGTGATCATGTCTCTAGTCATGATGCTGGGCATGCTAATTCTGAAGGGGAATCTAAAAGGGATTTGGATGAAAAGTTTGTAAGAAGAGATTTTCATGGTTCGGGTATTGGTGATAAAACAGAAAGACGTACTAGAAACAAGGACAGGCCTGATCGTGGTGTTTGGGCACCTCTTCGCCGTTCCGATTCTTCACATTCTAGTAATGAGCTCTCATCATCCTCACTGGCACAGTCTGCACCATCATATCCTGAATCAGTTGAAGGAGAGGTAAAAGAAAATGCTTATTCGGGAAACAGGAGTGGTGAATTCTCAACTTCTGCAGGTGGACGTAGTAGTCCCTCTGTTGAGAATGGTTCACAAAGAATTTTTACTCGTCGTGGGGCTCCCTATATAGTGAAGGATGATGGTGCAGTCAGTTCGAGTGAAGGGAAACTTTCAAAGAAAGGTGTTGGGAATAGTACTCATGAGAAACAAGTTTGGGTTCAGAAATCATCTTCAGGCTCTTAA
Protein sequence

>Msa0487720

MKARSEKGRTKVVIRHLPPSLTESDLIQHIDNRFSSRYHWFVFRSGNTSYRNQKYARAYLDFNSPDDVFEFAEFFNGHVFVNEKGVQHKAVVEYAPSQRVPKPSTKKDGREGTIYKDPDYLEFLKLISKPQEHLPSAEIQLERKEAEQAGASKEAPIVTPLMAYIRQKRAVDSGPLVSSAATRVGRRARAAMQGKPGPSNTRRGSEKKKYVQKDNVKNANRKDLKDKSAFTVVPRREDHSSESSIKGVYEIDSSHVIDEYTVHGIEGSVSGIPLTSDSGKKKILLLKGKQREIPKATEGMVKQQNAQSANSPIPTTSKQNQKREAGGRLIRSILLNNESRPSQSTSTAQHKIQILTSENGRRPPRPFGSRSGLSDHVSSHDAGHANSEGESKRDLDEKFVRRDFHGSGIGDKTERRTRNKDRPDRGVWAPLRRSDSSHSSNELSSSSLAQSAPSYPESVEGEVKENAYSGNRSGEFSTSAGGRSSPSVENGSQRIFTRRGAPYIVKDDGAVSSSEGKLSKKGVGNSTHEKQVWVQKSSSGS*