AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0283190

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0283190 MtrunA17_Chr2g0298581 94.222 225 13 0 1 225 468 692 2.93e-154 444
Msa0283190 MtrunA17_Chr3g0095791 76.682 223 52 0 3 225 469 691 3.07e-125 369
Msa0283190 MtrunA17_Chr2g0307191 76.233 223 53 0 3 225 470 692 3.84e-120 357
Msa0283190 MtrunA17_Chr3g0077511 66.960 227 73 1 1 225 468 694 7.75e-109 327
Msa0283190 MtrunA17_Chr4g0046401 37.668 223 138 1 3 224 491 713 1.43e-45 160
Msa0283190 MtrunA17_Chr1g0186381 32.889 225 146 3 3 224 490 712 1.15e-44 158
Msa0283190 MtrunA17_Chr2g0307221 72.464 69 19 0 3 71 7 75 3.08e-29 104
Msa0283190 MtrunA17_Chr3g0102531 28.889 225 157 2 3 224 483 707 3.23e-27 108
Msa0283190 MtrunA17_Chr3g0102541 28.070 228 158 2 3 224 484 711 1.33e-25 104
Msa0283190 MtrunA17_Chr3g0102551 26.168 214 151 3 17 224 503 715 2.01e-23 98.2
Msa0283190 MtrunA17_Chr2g0322331 26.126 222 158 6 1 217 128 348 3.95e-14 70.5
Msa0283190 MtrunA17_Chr8g0364641 25.431 232 157 6 1 223 715 939 4.37e-14 70.9
Msa0283190 MtrunA17_Chr3g0088821 25.110 227 162 5 1 223 814 1036 4.24e-12 65.1
Msa0283190 MtrunA17_Chr8g0383701 25.974 231 154 6 1 223 833 1054 1.60e-11 63.5
Msa0283190 MtrunA17_Chr2g0296991 25.110 227 161 4 1 223 781 1002 1.61e-11 63.5
Msa0283190 MtrunA17_Chr8g0352231 24.359 234 155 5 1 223 814 1036 2.45e-11 62.8
Msa0283190 MtrunA17_Chr4g0073711 24.891 229 160 6 1 223 774 996 3.54e-11 62.4
Msa0283190 MtrunA17_Chr7g0267731 24.359 234 155 5 1 223 722 944 4.20e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0283190 AT4G24010.1 31.858 226 150 3 1 224 483 706 5.34e-36 134
Msa0283190 AT4G24000.2 29.204 226 156 3 1 224 281 504 1.44e-33 126
Msa0283190 AT4G24000.1 29.204 226 156 3 1 224 473 696 9.09e-33 125
Msa0283190 AT4G23990.2 30.973 226 152 3 1 224 288 511 5.16e-31 119
Msa0283190 AT4G23990.1 30.973 226 152 3 1 224 502 725 2.55e-30 118
Msa0283190 AT1G55850.1 27.111 225 161 3 3 224 481 705 4.94e-21 91.7
Msa0283190 AT4G32410.1 25.974 231 155 6 1 223 816 1038 3.32e-14 71.6
Msa0283190 AT5G17420.1 24.561 228 162 5 1 223 762 984 5.37e-13 68.2
Msa0283190 AT2G25540.1 23.377 231 161 6 1 223 796 1018 4.43e-11 62.4

Find 117 sgRNAs with CRISPR-Local

Find 308 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTAAATATTGTTTGCTTCTT+TGG 0.079838 2_3:-20221612 Msa0283190:CDS
TTTGCTTCTTTGGTGGTTTA+TGG 0.157159 2_3:-20221602 Msa0283190:CDS
GAACATAAAATACACAAATT+AGG 0.219238 2_3:-20222535 Msa0283190:five_prime_UTR
TGATTACAGCTTAGGGTATC+AGG 0.238209 2_3:-20223680 Msa0283190:intron
GTCACCATACAAAGATTCTT+TGG 0.260388 2_3:+20225580 None:intergenic
TTGGGTTGCTTCCGAAGTTT+TGG 0.268644 2_3:+20225599 None:intergenic
CCTATGAGAGAAACACAAAT+TGG 0.275541 2_3:-20222571 Msa0283190:five_prime_UTR
GAGCCATTACATAGCTAATA+AGG 0.283385 2_3:+20221532 None:intergenic
CCAATTTGTGTTTCTCTCAT+AGG 0.285482 2_3:+20222571 None:intergenic
AAATATAGTCCATTCACTTA+TGG 0.291383 2_3:-20222169 Msa0283190:CDS
CAACCAGTGGCATTTCCTTT+TGG 0.305968 2_3:+20223880 None:intergenic
AGTAGAAGTGCATTACTCTT+TGG 0.327163 2_3:-20223297 Msa0283190:five_prime_UTR
AACATAAAATACACAAATTA+GGG 0.329022 2_3:-20222534 Msa0283190:five_prime_UTR
GTTATTCCATACACCCTATA+TGG 0.330435 2_3:-20222082 Msa0283190:CDS
CTGAGGAACAATTCCATATA+GGG 0.350405 2_3:+20222069 None:intergenic
TGTGAAACATTTGTGGGAAT+TGG 0.356347 2_3:+20223531 None:intergenic
TTTCTTACCTTTGGAAATAC+AGG 0.359003 2_3:+20222025 None:intergenic
ACAACCTGATCATCCCAAAA+AGG 0.366065 2_3:+20225748 None:intergenic
ACATATTCCTCCGTATTTCA+TGG 0.377513 2_3:+20221444 None:intergenic
TTGTATCTATGAGGAACATT+TGG 0.386047 2_3:+20223834 None:intergenic
TCTGAGGAACAATTCCATAT+AGG 0.386390 2_3:+20222068 None:intergenic
AAGGTTAAACAATGAACAAT+AGG 0.386453 2_3:+20222133 None:intergenic
TTTGGAAGTCCAAACCAAAA+AGG 0.388326 2_3:-20223279 Msa0283190:intron
AATATTGTTTGCTTCTTTGG+TGG 0.391566 2_3:-20221609 Msa0283190:CDS
ATTCCTTCTTTCACGTTAGT+TGG 0.391890 2_3:+20222241 None:intergenic
AAACTTGAGAGTACCATTAC+TGG 0.413359 2_3:-20222337 Msa0283190:five_prime_UTR
TCACCATACAAAGATTCTTT+GGG 0.416966 2_3:+20225581 None:intergenic
AGTATGAGTAACACAATCAT+TGG 0.420712 2_3:+20221633 None:intergenic
CTTGATGCTCAAAACAACTT+TGG 0.422960 2_3:-20222707 Msa0283190:five_prime_UTR
CTATGAGAGAAACACAAATT+GGG 0.429297 2_3:-20222570 Msa0283190:five_prime_UTR
CTCATAAGTCCTAGCTCAAC+TGG 0.431431 2_3:+20222447 None:intergenic
TTTCCTTATTAGCTATGTAA+TGG 0.433495 2_3:-20221535 Msa0283190:CDS
GGGTGTATGGAATAACATAT+AGG 0.436265 2_3:+20222089 None:intergenic
TTTATCGAGGTAATTACAAC+TGG 0.437734 2_3:-20221864 Msa0283190:CDS
ACAATTCCATATAGGGTGTA+TGG 0.445306 2_3:+20222076 None:intergenic
CCTCAGATTTGCTTCTTGAA+AGG 0.447849 2_3:-20222052 Msa0283190:CDS
CAATCTACGATAAGAACATA+AGG 0.458599 2_3:+20223641 None:intergenic
GTTATAATCCCCTCTAGAAT+AGG 0.460351 2_3:+20221501 None:intergenic
ATCTCCTTCATTGTAGAGGT+TGG 0.465697 2_3:-20222312 Msa0283190:five_prime_UTR
GCAAGATCTTGAGAGATTTG+AGG 0.467361 2_3:+20223560 None:intergenic
AACATTTGAACCATGAAATA+CGG 0.467721 2_3:-20221454 Msa0283190:three_prime_UTR
GAAGATCATTAACGACCAAA+AGG 0.469344 2_3:-20223895 Msa0283190:intron
GGTGTATGGAATAACATATA+GGG 0.472437 2_3:+20222090 None:intergenic
TACTCAAAAGAAATATGAGC+AGG 0.478437 2_3:-20221694 Msa0283190:CDS
CAACCCAAAGAATCTTTGTA+TGG 0.479542 2_3:-20225584 Msa0283190:five_prime_UTR
CGATGGTGCAGCGTTGCTCA+TGG 0.481187 2_3:-20221658 Msa0283190:CDS
GATAAAATGCTGAATCTGAC+TGG 0.483140 2_3:+20221881 None:intergenic
GGCTATCTCCTTCATTGTAG+AGG 0.483566 2_3:-20222316 Msa0283190:five_prime_UTR
CTTGAAAGTCCATAAGTGAA+TGG 0.490494 2_3:+20222160 None:intergenic
GAATGAGTCAGTTGATAAAG+TGG 0.496228 2_3:-20222222 Msa0283190:CDS
CAGGGTAGGTTTAATTTCGA+TGG 0.500941 2_3:-20221675 Msa0283190:CDS
ATTAGGGTAATGAGTAACCT+AGG 0.502689 2_3:-20222518 Msa0283190:five_prime_UTR
GATATCAATCAAGTTAATGA+TGG 0.505706 2_3:+20222386 None:intergenic
CTAATGTTGTGAAACATTTG+TGG 0.509676 2_3:+20223524 None:intergenic
TGTTACAGGTTACGGAGCCT+TGG 0.510055 2_3:-20221932 Msa0283190:intron
ATGGATGGGTTAAGAGGTCC+AGG 0.516315 2_3:-20223345 Msa0283190:five_prime_UTR
TTAAGAGGTCCAGGTCTCAC+TGG 0.518397 2_3:-20223336 Msa0283190:five_prime_UTR
ATCTCCAACCTCTACAATGA+AGG 0.521816 2_3:+20222308 None:intergenic
ACAATGTGGAAAGGAATGGA+TGG 0.521925 2_3:-20223360 Msa0283190:five_prime_UTR
TAATGTTGTGAAACATTTGT+GGG 0.524590 2_3:+20223525 None:intergenic
CGAACTCCGGTCATGACGTC+CGG 0.524720 2_3:-20222492 Msa0283190:five_prime_UTR
AAACACAAATTGGGGTAATG+AGG 0.526595 2_3:-20222561 Msa0283190:five_prime_UTR
GGTCCAGGTCTCACTGGCAG+TGG 0.527591 2_3:-20223330 Msa0283190:five_prime_UTR
TCTAAGCTATCCTATTCTAG+AGG 0.529147 2_3:-20221511 Msa0283190:CDS
ATCGAGGTAATTACAACTGG+TGG 0.531798 2_3:-20221861 Msa0283190:CDS
TTAACTTGATTGATATCCAC+AGG 0.535118 2_3:-20222380 Msa0283190:five_prime_UTR
ATTATAACTATGAAAACAAA+GGG 0.535272 2_3:-20221486 Msa0283190:CDS
GTAACCTAGGGTTCGAACTC+CGG 0.536289 2_3:-20222505 Msa0283190:five_prime_UTR
GCTCCTCCTTTGTATCTATG+AGG 0.536638 2_3:+20223825 None:intergenic
GTGGCTCCTCGACACATTGG+TGG 0.541298 2_3:-20221842 Msa0283190:CDS
AAATATCGAAATTGTTAGGC+CGG 0.542590 2_3:+20222473 None:intergenic
GTTAGGCCGGACGTCATGAC+CGG 0.546193 2_3:+20222486 None:intergenic
TTAGACAATGTGGAAAGGAA+TGG 0.546732 2_3:-20223364 Msa0283190:intron
TAAGCTTGACAAGTGACAAA+AGG 0.547809 2_3:+20222114 None:intergenic
TGGTGACTGATAGACATTCT+CGG 0.549468 2_3:-20225564 Msa0283190:five_prime_UTR
AAAAGAAATATGAGCAGGGT+AGG 0.551647 2_3:-20221689 Msa0283190:CDS
CTAAGCTATCCTATTCTAGA+GGG 0.554636 2_3:-20221510 Msa0283190:CDS
TTCTATTAGACAATGTGGAA+AGG 0.555279 2_3:-20223369 Msa0283190:intron
AATCTACGATAAGAACATAA+GGG 0.556072 2_3:+20223642 None:intergenic
TGATAGACATTCTCGGATTG+AGG 0.558381 2_3:-20225557 Msa0283190:intron
TTTCCACTGCCAGTGAGACC+TGG 0.561449 2_3:+20223327 None:intergenic
TTTACAAGAAGCATGTGAAG+TGG 0.562845 2_3:-20222603 Msa0283190:five_prime_UTR
AAAATGGTTTGGGTTGAACA+AGG 0.566860 2_3:-20221754 Msa0283190:CDS
ATGACCGGAGTTCGAACCCT+AGG 0.571352 2_3:+20222501 None:intergenic
AATGAGTCAGTTGATAAAGT+GGG 0.576301 2_3:-20222221 Msa0283190:CDS
GCTCCAACTAACGTGAAAGA+AGG 0.576975 2_3:-20222244 Msa0283190:five_prime_UTR
TTCATTCCACCAATGTGTCG+AGG 0.577612 2_3:+20221836 None:intergenic
CTTGATTGATATCCACAGGT+AGG 0.579610 2_3:-20222376 Msa0283190:five_prime_UTR
TAACTATGAAAACAAAGGGT+GGG 0.580904 2_3:-20221482 Msa0283190:CDS
CAATGTGGAAAGGAATGGAT+GGG 0.583820 2_3:-20223359 Msa0283190:five_prime_UTR
ATGGAGACTACTCAATGTGA+GGG 0.586276 2_3:-20221583 Msa0283190:CDS
AATGTTCCTCATAGATACAA+AGG 0.598503 2_3:-20223831 Msa0283190:five_prime_UTR
CGACCAAAAGGAAATGCCAC+TGG 0.605093 2_3:-20223883 Msa0283190:five_prime_UTR
GATTACAGCTTAGGGTATCA+GGG 0.607803 2_3:-20223679 Msa0283190:intron
GATTATAACTATGAAAACAA+AGG 0.608756 2_3:-20221487 Msa0283190:CDS
AAAGGAATGGATGGGTTAAG+AGG 0.611560 2_3:-20223351 Msa0283190:five_prime_UTR
AGGAATACCTGTATTTCCAA+AGG 0.611812 2_3:-20222032 Msa0283190:intron
ACATATATAATAGTGAGGCT+AGG 0.613526 2_3:-20223493 Msa0283190:five_prime_UTR
ATAACTATGAAAACAAAGGG+TGG 0.613730 2_3:-20221483 Msa0283190:CDS
CTGGTGGCTCCTCGACACAT+TGG 0.616039 2_3:-20221845 Msa0283190:CDS
TATGAGAGAAACACAAATTG+GGG 0.621432 2_3:-20222569 Msa0283190:five_prime_UTR
TATGGAGACTACTCAATGTG+AGG 0.626897 2_3:-20221584 Msa0283190:CDS
TTAGGGTAATGAGTAACCTA+GGG 0.627194 2_3:-20222517 Msa0283190:five_prime_UTR
ATGAAGGAGATAGCCAGTAA+TGG 0.638543 2_3:+20222324 None:intergenic
ACTCAAAAGAAATATGAGCA+GGG 0.640748 2_3:-20221693 Msa0283190:CDS
CCTTTCAAGAAGCAAATCTG+AGG 0.641008 2_3:+20222052 None:intergenic
GAAAGACATATATAATAGTG+AGG 0.642838 2_3:-20223498 Msa0283190:five_prime_UTR
GTATCAGGGCTAATCAGCAA+TGG 0.646196 2_3:-20223665 Msa0283190:five_prime_UTR
GGAGCACATCCCAAGAAACA+TGG 0.648652 2_3:+20222262 None:intergenic
AGGAGGAGCTCTCAATACAC+TGG 0.655097 2_3:-20223811 Msa0283190:intron
ACTGTAAACACTATAAACCA+AGG 0.657295 2_3:+20221915 None:intergenic
GCATAAGAGAATCCTACCTG+TGG 0.657602 2_3:+20222364 None:intergenic
CGAGAAACATAAACAACCAG+TGG 0.661347 2_3:+20223867 None:intergenic
TAAGCTATCCTATTCTAGAG+GGG 0.672123 2_3:-20221509 Msa0283190:CDS
ATTTGAACCATGAAATACGG+AGG 0.683631 2_3:-20221451 Msa0283190:three_prime_UTR
GTTCCTCATAGATACAAAGG+AGG 0.693020 2_3:-20223828 Msa0283190:five_prime_UTR
GAATCACTGAAAGCAATACG+TGG 0.728981 2_3:-20222665 Msa0283190:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTGATTAAACAAATAAAAA+TGG - chr2_3:20221862-20221881 Msa0283190:CDS 10.0%
!!! ATTTGTATTTTAATATTTAG+AGG - chr2_3:20222537-20222556 Msa0283190:five_prime_UTR 10.0%
!!! ACATTTTATGTATTTATATT+AGG - chr2_3:20222935-20222954 Msa0283190:intron 10.0%
!!! GAAAAATGAATAATTTTAAA+AGG + chr2_3:20223101-20223120 None:intergenic 10.0%
!! TTAATTTAAAGAAATTTAAG+AGG + chr2_3:20223351-20223370 None:intergenic 10.0%
!! AATGTTATATTTATTCATAT+TGG - chr2_3:20224325-20224344 Msa0283190:intron 10.0%
!! TATATATATGGAATTTATAA+TGG - chr2_3:20224361-20224380 Msa0283190:intron 10.0%
!!! TTAAATAAATTTTATGTTAC+AGG - chr2_3:20225159-20225178 Msa0283190:intron 10.0%
!!! TTGATTTTTTAGAAATGTTA+TGG - chr2_3:20221833-20221852 Msa0283190:CDS 15.0%
!! ATTATTTCCATATTTAAAAG+AGG + chr2_3:20221958-20221977 None:intergenic 15.0%
!!! TAACTTCTTGTTATTAAAAA+TGG - chr2_3:20222685-20222704 Msa0283190:five_prime_UTR 15.0%
!!! TGAATAATTTTAAAAGGAAA+TGG + chr2_3:20223095-20223114 None:intergenic 15.0%
!! ATCTTCAAAAAAAGATAATA+AGG + chr2_3:20223196-20223215 None:intergenic 15.0%
!!! AAAATTGTCATTTTCTAAAT+AGG - chr2_3:20224135-20224154 Msa0283190:intron 15.0%
!!! AAATTGTCATTTTCTAAATA+GGG - chr2_3:20224136-20224155 Msa0283190:intron 15.0%
!! AACATAAAATACACAAATTA+GGG - chr2_3:20224571-20224590 Msa0283190:intron 15.0%
!! ATTATAACTATGAAAACAAA+GGG - chr2_3:20225619-20225638 Msa0283190:five_prime_UTR 15.0%
!! CAAAAAAATATCCAAAACTT+CGG - chr2_3:20221495-20221514 Msa0283190:CDS 20.0%
!!! ATTTTTTGGATTGTTATTCT+CGG - chr2_3:20221763-20221782 Msa0283190:CDS 20.0%
!!! TTCAATTTCTCCATTTTTAA+GGG + chr2_3:20222121-20222140 None:intergenic 20.0%
!!! TTTCAATTTCTCCATTTTTA+AGG + chr2_3:20222122-20222141 None:intergenic 20.0%
!!! ACCAATTTTTTGTTTTTGAA+TGG + chr2_3:20222294-20222313 None:intergenic 20.0%
!!! AACAAAAAATTGGTTTAGAT+AGG - chr2_3:20222300-20222319 Msa0283190:five_prime_UTR 20.0%
!! TTAATAATATGGCAACAATT+GGG + chr2_3:20222373-20222392 None:intergenic 20.0%
!!! CATTTTCTGAGTTAATAATA+TGG + chr2_3:20222384-20222403 None:intergenic 20.0%
!!! ACAAATACCATAATCTTTTA+GGG + chr2_3:20222523-20222542 None:intergenic 20.0%
!!! TACAAATACCATAATCTTTT+AGG + chr2_3:20222524-20222543 None:intergenic 20.0%
!!! CTTGTTATTAAAAATGGTAA+AGG - chr2_3:20222691-20222710 Msa0283190:five_prime_UTR 20.0%
!!! TAATATAGACCTCTAAAAAA+TGG + chr2_3:20222728-20222747 None:intergenic 20.0%
!! GATTGAACTTAATATTTACA+TGG - chr2_3:20222748-20222767 Msa0283190:intron 20.0%
!!! AAGACAAACTTAATTCTTTT+GGG + chr2_3:20222813-20222832 None:intergenic 20.0%
!!! AATGTTAATAAGTGTCATTA+GGG + chr2_3:20222920-20222939 None:intergenic 20.0%
!!! AAATGTTAATAAGTGTCATT+AGG + chr2_3:20222921-20222940 None:intergenic 20.0%
!!! ATAAGGAATATTTTGTTTGT+AGG + chr2_3:20223132-20223151 None:intergenic 20.0%
!!! TGGTCATTATTTTGATAATA+AGG + chr2_3:20223149-20223168 None:intergenic 20.0%
!!! TCATCAATATATGTGTATTT+TGG + chr2_3:20223169-20223188 None:intergenic 20.0%
!!! TTTTGCCATTTCTTTTAATA+GGG + chr2_3:20223962-20223981 None:intergenic 20.0%
!!! AATTGTCATTTTCTAAATAG+GGG - chr2_3:20224137-20224156 Msa0283190:intron 20.0%
!!! AAGCTTTATCTTTAAAATAC+AGG + chr2_3:20224212-20224231 None:intergenic 20.0%
!! GAACATAAAATACACAAATT+AGG - chr2_3:20224570-20224589 Msa0283190:intron 20.0%
!!! AAATTTTATGTTACAGGTTA+CGG - chr2_3:20225165-20225184 Msa0283190:intron 20.0%
!! TTATAGAAGCAACAAAAAAA+TGG - chr2_3:20225335-20225354 Msa0283190:intron 20.0%
!! GATTATAACTATGAAAACAA+AGG - chr2_3:20225618-20225637 Msa0283190:five_prime_UTR 20.0%
!! TGATGATTTTACAATTTGAC+AGG - chr2_3:20221455-20221474 Msa0283190:three_prime_UTR 25.0%
!! TTTTTGCATTTTCTCGTATT+TGG + chr2_3:20221481-20221500 None:intergenic 25.0%
! ATAAAGTCACCAATAAATTG+AGG - chr2_3:20221705-20221724 Msa0283190:CDS 25.0%
! ATAGGATAACCTCAATTTAT+TGG + chr2_3:20221717-20221736 None:intergenic 25.0%
!!! TATCCTATGTGTTTGTTTTA+AGG - chr2_3:20221729-20221748 Msa0283190:CDS 25.0%
! TTACCTTAAAACAAACACAT+AGG + chr2_3:20221735-20221754 None:intergenic 25.0%
!!! AGGTAAGAACTTACATTTTT+TGG - chr2_3:20221749-20221768 Msa0283190:CDS 25.0%
! ATTCTCGGAATAATATTTCT+AGG - chr2_3:20221778-20221797 Msa0283190:CDS 25.0%
!! GATTCATCCTCTTTTAAATA+TGG - chr2_3:20221948-20221967 Msa0283190:intron 25.0%
! TCATGTGTAAATAACATTTC+TGG - chr2_3:20221989-20222008 Msa0283190:intron 25.0%
!! AAGTCATTATTTCTTTGTTG+AGG + chr2_3:20222265-20222284 None:intergenic 25.0%
! GCCATTCAAAAACAAAAAAT+TGG - chr2_3:20222290-20222309 Msa0283190:five_prime_UTR 25.0%
! GTTAATAATATGGCAACAAT+TGG + chr2_3:20222374-20222393 None:intergenic 25.0%
! AAGAAAGTAATGCAAATTCA+TGG + chr2_3:20222481-20222500 None:intergenic 25.0%
! TATTTAGAGGTCATCTAATA+TGG - chr2_3:20222550-20222569 Msa0283190:five_prime_UTR 25.0%
!!! TATCTTAGACCATTTTTTAG+AGG - chr2_3:20222716-20222735 Msa0283190:five_prime_UTR 25.0%
!! TCCTTAAACAATGTCTTTTA+GGG + chr2_3:20222789-20222808 None:intergenic 25.0%
!! TTCCTTAAACAATGTCTTTT+AGG + chr2_3:20222790-20222809 None:intergenic 25.0%
!! CAAGACAAACTTAATTCTTT+TGG + chr2_3:20222814-20222833 None:intergenic 25.0%
! TATTTATATTAGGCTTGATG+AGG - chr2_3:20222945-20222964 Msa0283190:intron 25.0%
!! ATGTTTCAACTTGTTCATTA+GGG - chr2_3:20223030-20223049 Msa0283190:intron 25.0%
! TGTCTTAATGACATTGTTTA+AGG - chr2_3:20223066-20223085 Msa0283190:intron 25.0%
! AATCTACGATAAGAACATAA+GGG + chr2_3:20223466-20223485 None:intergenic 25.0%
! TAATGTTGTGAAACATTTGT+GGG + chr2_3:20223583-20223602 None:intergenic 25.0%
! GAAAGACATATATAATAGTG+AGG - chr2_3:20223607-20223626 Msa0283190:five_prime_UTR 25.0%
!! ATCTAAAGAGCTTGAAATTT+TGG + chr2_3:20223658-20223677 None:intergenic 25.0%
!! GAATTTTCTATTAGACAATG+TGG - chr2_3:20223731-20223750 Msa0283190:intron 25.0%
! TTAGAATTAATAATGTCCTC+AGG + chr2_3:20223894-20223913 None:intergenic 25.0%
!!! TCGCAACATTTTAAAACATA+GGG + chr2_3:20223931-20223950 None:intergenic 25.0%
!!! ATCGCAACATTTTAAAACAT+AGG + chr2_3:20223932-20223951 None:intergenic 25.0%
!!! GTTTTAAAATGTTGCGATTT+TGG - chr2_3:20223934-20223953 Msa0283190:intron 25.0%
!!! TTTGCCATTTCTTTTAATAG+GGG + chr2_3:20223961-20223980 None:intergenic 25.0%
!!! CTTTTGCCATTTCTTTTAAT+AGG + chr2_3:20223963-20223982 None:intergenic 25.0%
! ATCATATTTCCCTTATGTTA+GGG + chr2_3:20224022-20224041 None:intergenic 25.0%
!!! ATTGTCATTTTCTAAATAGG+GGG - chr2_3:20224138-20224157 Msa0283190:intron 25.0%
! CATTCTTAACCAATAATCTT+AGG - chr2_3:20224242-20224261 Msa0283190:intron 25.0%
!! TATTTATTCATATTGGCTGA+CGG - chr2_3:20224332-20224351 Msa0283190:intron 25.0%
! TATATGGAATTTATAATGGC+AGG - chr2_3:20224365-20224384 Msa0283190:intron 25.0%
! ATATGGAATTTATAATGGCA+GGG - chr2_3:20224366-20224385 Msa0283190:intron 25.0%
! GCAAAAATATCGAAATTGTT+AGG + chr2_3:20224639-20224658 None:intergenic 25.0%
! GATATCAATCAAGTTAATGA+TGG + chr2_3:20224722-20224741 None:intergenic 25.0%
! AAATATAGTCCATTCACTTA+TGG - chr2_3:20224936-20224955 Msa0283190:intron 25.0%
! AAGGTTAAACAATGAACAAT+AGG + chr2_3:20224975-20224994 None:intergenic 25.0%
!!! TTTAAAAGTGTTAAGATTGC+CGG + chr2_3:20225144-20225163 None:intergenic 25.0%
!!! AATGCGATTTTAACATCAAT+CGG - chr2_3:20225298-20225317 Msa0283190:intron 25.0%
! AAGCAACAAAAAAATGGTTT+GGG - chr2_3:20225341-20225360 Msa0283190:intron 25.0%
! CTAAATATTGTTTGCTTCTT+TGG - chr2_3:20225493-20225512 Msa0283190:intron 25.0%
! TTTCCTTATTAGCTATGTAA+TGG - chr2_3:20225570-20225589 Msa0283190:five_prime_UTR 25.0%
! AACATTTGAACCATGAAATA+CGG - chr2_3:20225651-20225670 Msa0283190:five_prime_UTR 25.0%
! TTTCTGTGTTGTGTTTTCAT+TGG - chr2_3:20221388-20221407 Msa0283190:three_prime_UTR 30.0%
! TTCTGTGTTGTGTTTTCATT+GGG - chr2_3:20221389-20221408 Msa0283190:three_prime_UTR 30.0%
TCACCATACAAAGATTCTTT+GGG + chr2_3:20221527-20221546 None:intergenic 30.0%
! TCAATTTTTACCAAACACGT+GGG + chr2_3:20221817-20221836 None:intergenic 30.0%
! ATCAATTTTTACCAAACACG+TGG + chr2_3:20221818-20221837 None:intergenic 30.0%
GATGAATCTAACATTCTCAT+GGG + chr2_3:20221936-20221955 None:intergenic 30.0%
AACAAACACACCCTTAAAAA+TGG - chr2_3:20222108-20222127 Msa0283190:CDS 30.0%
!!! TTTTTTTTCCATGCTTGTTG+TGG + chr2_3:20222458-20222477 None:intergenic 30.0%
! TTTTTGCTGCAAGTTAGAAA+TGG + chr2_3:20222983-20223002 None:intergenic 30.0%
! CTAATGAACAAGTTGAAACA+TGG + chr2_3:20223031-20223050 None:intergenic 30.0%
! CATGTTTCAACTTGTTCATT+AGG - chr2_3:20223029-20223048 Msa0283190:intron 30.0%
TTGTATCTATGAGGAACATT+TGG + chr2_3:20223274-20223293 None:intergenic 30.0%
AATGTTCCTCATAGATACAA+AGG - chr2_3:20223274-20223293 Msa0283190:intron 30.0%
ATCAAATGTGATTACAGCTT+AGG - chr2_3:20223417-20223436 Msa0283190:intron 30.0%
TCAAATGTGATTACAGCTTA+GGG - chr2_3:20223418-20223437 Msa0283190:intron 30.0%
CAATCTACGATAAGAACATA+AGG + chr2_3:20223467-20223486 None:intergenic 30.0%
! AAAAAAGCACATGGATTGTT+TGG + chr2_3:20223519-20223538 None:intergenic 30.0%
CTAATGTTGTGAAACATTTG+TGG + chr2_3:20223584-20223603 None:intergenic 30.0%
ACATATATAATAGTGAGGCT+AGG - chr2_3:20223612-20223631 Msa0283190:five_prime_UTR 30.0%
GACAAAGACACAAAAATGAA+TGG + chr2_3:20223686-20223705 None:intergenic 30.0%
TTCTATTAGACAATGTGGAA+AGG - chr2_3:20223736-20223755 Msa0283190:intron 30.0%
!!! CTATTTGTACCTTTTTGGTT+TGG + chr2_3:20223838-20223857 None:intergenic 30.0%
!! TGATGCTATTTGTACCTTTT+TGG + chr2_3:20223843-20223862 None:intergenic 30.0%
!!! GCAACATTTTAAAACATAGG+GGG + chr2_3:20223929-20223948 None:intergenic 30.0%
!!! CGCAACATTTTAAAACATAG+GGG + chr2_3:20223930-20223949 None:intergenic 30.0%
!! TTGCCATTTCTTTTAATAGG+GGG + chr2_3:20223960-20223979 None:intergenic 30.0%
TCATATTTCCCTTATGTTAG+GGG + chr2_3:20224021-20224040 None:intergenic 30.0%
GATCATATTTCCCTTATGTT+AGG + chr2_3:20224023-20224042 None:intergenic 30.0%
!! AACTTTTTGAGAAGATAAGG+GGG + chr2_3:20224051-20224070 None:intergenic 30.0%
!! CAACTTTTTGAGAAGATAAG+GGG + chr2_3:20224052-20224071 None:intergenic 30.0%
!! GCAACTTTTTGAGAAGATAA+GGG + chr2_3:20224053-20224072 None:intergenic 30.0%
TTCTCAAAAAGTTGCGATTA+TGG - chr2_3:20224058-20224077 Msa0283190:intron 30.0%
AATGAGTGTCCTAAGATTAT+TGG + chr2_3:20224254-20224273 None:intergenic 30.0%
TGACGGAGACAATATATATA+TGG - chr2_3:20224349-20224368 Msa0283190:intron 30.0%
TATGGAATTTATAATGGCAG+GGG - chr2_3:20224367-20224386 Msa0283190:intron 30.0%
CTATGAGAGAAACACAAATT+GGG - chr2_3:20224535-20224554 Msa0283190:intron 30.0%
TATGAGAGAAACACAAATTG+GGG - chr2_3:20224536-20224555 Msa0283190:intron 30.0%
AAATATCGAAATTGTTAGGC+CGG + chr2_3:20224635-20224654 None:intergenic 30.0%
! TTAACTTGATTGATATCCAC+AGG - chr2_3:20224725-20224744 Msa0283190:intron 30.0%
!!! TGGTATTTTTGGGTAAAGAT+AGG + chr2_3:20224826-20224845 None:intergenic 30.0%
! CCAAGAAACATGGTATTTTT+GGG + chr2_3:20224836-20224855 None:intergenic 30.0%
CCAAAAATACCATGTTTCTT+GGG - chr2_3:20224834-20224853 Msa0283190:intron 30.0%
!! AATGAGTCAGTTGATAAAGT+GGG - chr2_3:20224884-20224903 Msa0283190:intron 30.0%
GGTGTATGGAATAACATATA+GGG + chr2_3:20225018-20225037 None:intergenic 30.0%
! TTTCTTACCTTTGGAAATAC+AGG + chr2_3:20225083-20225102 None:intergenic 30.0%
GTATTTCCAAAGGTAAGAAA+TGG - chr2_3:20225083-20225102 Msa0283190:intron 30.0%
ATCTATCCATTTCTTACCTT+TGG + chr2_3:20225092-20225111 None:intergenic 30.0%
ACTGTAAACACTATAAACCA+AGG + chr2_3:20225193-20225212 None:intergenic 30.0%
TTTATCGAGGTAATTACAAC+TGG - chr2_3:20225241-20225260 Msa0283190:intron 30.0%
!! ATGCGATTTTAACATCAATC+GGG - chr2_3:20225299-20225318 Msa0283190:intron 30.0%
GAAGCAACAAAAAAATGGTT+TGG - chr2_3:20225340-20225359 Msa0283190:intron 30.0%
TACTCAAAAGAAATATGAGC+AGG - chr2_3:20225411-20225430 Msa0283190:intron 30.0%
ACTCAAAAGAAATATGAGCA+GGG - chr2_3:20225412-20225431 Msa0283190:intron 30.0%
AGTATGAGTAACACAATCAT+TGG + chr2_3:20225475-20225494 None:intergenic 30.0%
AATATTGTTTGCTTCTTTGG+TGG - chr2_3:20225496-20225515 Msa0283190:intron 30.0%
!! AGGGATTTTGATGAAATGTT+TGG - chr2_3:20225541-20225560 Msa0283190:intron 30.0%
ATAACTATGAAAACAAAGGG+TGG - chr2_3:20225622-20225641 Msa0283190:five_prime_UTR 30.0%
TAACTATGAAAACAAAGGGT+GGG - chr2_3:20225623-20225642 Msa0283190:five_prime_UTR 30.0%
CAACCCAAAGAATCTTTGTA+TGG - chr2_3:20221521-20221540 Msa0283190:CDS 35.0%
GTCACCATACAAAGATTCTT+TGG + chr2_3:20221528-20221547 None:intergenic 35.0%
! GAAATAAATGTGACTTGTCG+TGG - chr2_3:20221884-20221903 Msa0283190:CDS 35.0%
GGATGAATCTAACATTCTCA+TGG + chr2_3:20221937-20221956 None:intergenic 35.0%
! GCTTTGCAATCTCACATTTT+CGG - chr2_3:20222064-20222083 Msa0283190:CDS 35.0%
TAGATCCCTATCAATAGCTT+GGG - chr2_3:20222223-20222242 Msa0283190:CDS 35.0%
TGTTACCCAAGCTATTGATA+GGG + chr2_3:20222231-20222250 None:intergenic 35.0%
GATGAAGGAGGAAAAAAAGA+AGG + chr2_3:20222407-20222426 None:intergenic 35.0%
GCCCTAAAAGACATTGTTTA+AGG - chr2_3:20222785-20222804 Msa0283190:intron 35.0%
AGTTAGAAATGGTCCAAAGA+TGG + chr2_3:20222972-20222991 None:intergenic 35.0%
ATCAAACTTCATCTTTGGTG+AGG + chr2_3:20223006-20223025 None:intergenic 35.0%
TGGTCATCAAACTTCATCTT+TGG + chr2_3:20223011-20223030 None:intergenic 35.0%
GAAGATCATTAACGACCAAA+AGG - chr2_3:20223210-20223229 Msa0283190:intron 35.0%
! AGGATCAAGAAAAAAGCACA+TGG + chr2_3:20223528-20223547 None:intergenic 35.0%
TGTGAAACATTTGTGGGAAT+TGG + chr2_3:20223577-20223596 None:intergenic 35.0%
TTAGACAATGTGGAAAGGAA+TGG - chr2_3:20223741-20223760 Msa0283190:intron 35.0%
! AGTAGAAGTGCATTACTCTT+TGG - chr2_3:20223808-20223827 Msa0283190:intron 35.0%
TTTGGAAGTCCAAACCAAAA+AGG - chr2_3:20223826-20223845 Msa0283190:five_prime_UTR 35.0%
GAATTCTAACAAATGACCTG+AGG - chr2_3:20223875-20223894 Msa0283190:five_prime_UTR 35.0%
AGCATATTTCCCTAAACATG+GGG + chr2_3:20223989-20224008 None:intergenic 35.0%
GAGCATATTTCCCTAAACAT+GGG + chr2_3:20223990-20224009 None:intergenic 35.0%
AGAGCATATTTCCCTAAACA+TGG + chr2_3:20223991-20224010 None:intergenic 35.0%
ATATTTCCCTTATGTTAGGG+GGG + chr2_3:20224019-20224038 None:intergenic 35.0%
CATATTTCCCTTATGTTAGG+GGG + chr2_3:20224020-20224039 None:intergenic 35.0%
!! CGCAACTTTTTGAGAAGATA+AGG + chr2_3:20224054-20224073 None:intergenic 35.0%
!!! ATCGCAACATTTTGAAACTG+AGG - chr2_3:20224166-20224185 Msa0283190:intron 35.0%
!!! TCGCAACATTTTGAAACTGA+GGG - chr2_3:20224167-20224186 Msa0283190:intron 35.0%
CTTGATGCTCAAAACAACTT+TGG - chr2_3:20224398-20224417 Msa0283190:intron 35.0%
! TTTACAAGAAGCATGTGAAG+TGG - chr2_3:20224502-20224521 Msa0283190:intron 35.0%
CCAATTTGTGTTTCTCTCAT+AGG + chr2_3:20224537-20224556 None:intergenic 35.0%
CCTATGAGAGAAACACAAAT+TGG - chr2_3:20224534-20224553 Msa0283190:intron 35.0%
AAACACAAATTGGGGTAATG+AGG - chr2_3:20224544-20224563 Msa0283190:intron 35.0%
ATTAGGGTAATGAGTAACCT+AGG - chr2_3:20224587-20224606 Msa0283190:intron 35.0%
TTAGGGTAATGAGTAACCTA+GGG - chr2_3:20224588-20224607 Msa0283190:intron 35.0%
!! ATATTTTTGCCAGTTGAGCT+AGG - chr2_3:20224649-20224668 Msa0283190:intron 35.0%
!! AAACTTGAGAGTACCATTAC+TGG - chr2_3:20224768-20224787 Msa0283190:intron 35.0%
CCCAAAAATACCATGTTTCT+TGG - chr2_3:20224833-20224852 Msa0283190:intron 35.0%
! CCCAAGAAACATGGTATTTT+TGG + chr2_3:20224837-20224856 None:intergenic 35.0%
ATTCCTTCTTTCACGTTAGT+TGG + chr2_3:20224867-20224886 None:intergenic 35.0%
!! GAATGAGTCAGTTGATAAAG+TGG - chr2_3:20224883-20224902 Msa0283190:intron 35.0%
CTTGAAAGTCCATAAGTGAA+TGG + chr2_3:20224948-20224967 None:intergenic 35.0%
TAAGCTTGACAAGTGACAAA+AGG + chr2_3:20224994-20225013 None:intergenic 35.0%
GGGTGTATGGAATAACATAT+AGG + chr2_3:20225019-20225038 None:intergenic 35.0%
GTTATTCCATACACCCTATA+TGG - chr2_3:20225023-20225042 Msa0283190:intron 35.0%
ACAATTCCATATAGGGTGTA+TGG + chr2_3:20225032-20225051 None:intergenic 35.0%
CTGAGGAACAATTCCATATA+GGG + chr2_3:20225039-20225058 None:intergenic 35.0%
TCTGAGGAACAATTCCATAT+AGG + chr2_3:20225040-20225059 None:intergenic 35.0%
AGGAATACCTGTATTTCCAA+AGG - chr2_3:20225073-20225092 Msa0283190:intron 35.0%
GATAAAATGCTGAATCTGAC+TGG + chr2_3:20225227-20225246 None:intergenic 35.0%
! TCAGATTCAGCATTTTATCG+AGG - chr2_3:20225228-20225247 Msa0283190:intron 35.0%
!! AAAATGGTTTGGGTTGAACA+AGG - chr2_3:20225351-20225370 Msa0283190:intron 35.0%
AAAAGAAATATGAGCAGGGT+AGG - chr2_3:20225416-20225435 Msa0283190:intron 35.0%
! TTTGCTTCTTTGGTGGTTTA+TGG - chr2_3:20225503-20225522 Msa0283190:intron 35.0%
GAGCCATTACATAGCTAATA+AGG + chr2_3:20225576-20225595 None:intergenic 35.0%
TCTAAGCTATCCTATTCTAG+AGG - chr2_3:20225594-20225613 Msa0283190:five_prime_UTR 35.0%
CTAAGCTATCCTATTCTAGA+GGG - chr2_3:20225595-20225614 Msa0283190:five_prime_UTR 35.0%
! TAAGCTATCCTATTCTAGAG+GGG - chr2_3:20225596-20225615 Msa0283190:five_prime_UTR 35.0%
!! GTTATAATCCCCTCTAGAAT+AGG + chr2_3:20225607-20225626 None:intergenic 35.0%
ATTTGAACCATGAAATACGG+AGG - chr2_3:20225654-20225673 Msa0283190:five_prime_UTR 35.0%
ACATATTCCTCCGTATTTCA+TGG + chr2_3:20225664-20225683 None:intergenic 35.0%
!!! TGTACCTTTTTGGGATGATC+AGG - chr2_3:20221353-20221372 Msa0283190:three_prime_UTR 40.0%
ACAACCTGATCATCCCAAAA+AGG + chr2_3:20221360-20221379 None:intergenic 40.0%
! TGTTGTGTTTTCATTGGGTC+AGG - chr2_3:20221394-20221413 Msa0283190:three_prime_UTR 40.0%
TGGTGACTGATAGACATTCT+CGG - chr2_3:20221541-20221560 Msa0283190:CDS 40.0%
TGATAGACATTCTCGGATTG+AGG - chr2_3:20221548-20221567 Msa0283190:CDS 40.0%
ATTAGTCAGTTAAGCCGTGT+GGG + chr2_3:20221576-20221595 None:intergenic 40.0%
! TTAAGGGTGTGTTTGTTTCG+AGG + chr2_3:20222105-20222124 None:intergenic 40.0%
TCTATGTCAACAAGAGTCTC+TGG + chr2_3:20222162-20222181 None:intergenic 40.0%
CAAGCTATTGATAGGGATCT+AGG + chr2_3:20222224-20222243 None:intergenic 40.0%
CTAGATCCCTATCAATAGCT+TGG - chr2_3:20222222-20222241 Msa0283190:CDS 40.0%
GTGTTACCCAAGCTATTGAT+AGG + chr2_3:20222232-20222251 None:intergenic 40.0%
TTGGATGTAAGAGATGAAGG+AGG + chr2_3:20222419-20222438 None:intergenic 40.0%
CCTTCATCTCTTACATCCAA+CGG - chr2_3:20222419-20222438 Msa0283190:five_prime_UTR 40.0%
TTCTTTGAGCCATCTTGATC+AGG - chr2_3:20222496-20222515 Msa0283190:five_prime_UTR 40.0%
TCTTTGAGCCATCTTGATCA+GGG - chr2_3:20222497-20222516 Msa0283190:five_prime_UTR 40.0%
ATCAGGGCCCTAAAAGATTA+TGG - chr2_3:20222513-20222532 Msa0283190:five_prime_UTR 40.0%
AGGTCATCTAATATGGACTC+TGG - chr2_3:20222557-20222576 Msa0283190:five_prime_UTR 40.0%
GGTCATCTAATATGGACTCT+GGG - chr2_3:20222558-20222577 Msa0283190:five_prime_UTR 40.0%
CGAGAAACATAAACAACCAG+TGG + chr2_3:20223241-20223260 None:intergenic 40.0%
GTTCCTCATAGATACAAAGG+AGG - chr2_3:20223277-20223296 Msa0283190:intron 40.0%
! TGATTACAGCTTAGGGTATC+AGG - chr2_3:20223425-20223444 Msa0283190:intron 40.0%
! GATTACAGCTTAGGGTATCA+GGG - chr2_3:20223426-20223445 Msa0283190:intron 40.0%
GCAAGATCTTGAGAGATTTG+AGG + chr2_3:20223548-20223567 None:intergenic 40.0%
! TGAGGCTAGGAATGCTTTTA+CGG - chr2_3:20223625-20223644 Msa0283190:five_prime_UTR 40.0%
ACAATGTGGAAAGGAATGGA+TGG - chr2_3:20223745-20223764 Msa0283190:intron 40.0%
CAATGTGGAAAGGAATGGAT+GGG - chr2_3:20223746-20223765 Msa0283190:intron 40.0%
!! AAAGGAATGGATGGGTTAAG+AGG - chr2_3:20223754-20223773 Msa0283190:intron 40.0%
TGGCCCCCTATTAAAAGAAA+TGG - chr2_3:20223954-20223973 Msa0283190:intron 40.0%
CAAAAGTGACCCCATGTTTA+GGG - chr2_3:20223977-20223996 Msa0283190:intron 40.0%
! TTTTGACCCCCCTAACATAA+GGG - chr2_3:20224010-20224029 Msa0283190:intron 40.0%
! TGGTGTCTTCTCAGCAATTT+TGG - chr2_3:20224099-20224118 Msa0283190:intron 40.0%
! GGTGTCTTCTCAGCAATTTT+GGG - chr2_3:20224100-20224119 Msa0283190:intron 40.0%
!!! TCAGCAATTTTGGGACGAAA+GGG - chr2_3:20224109-20224128 Msa0283190:intron 40.0%
!!! CGCAACATTTTGAAACTGAG+GGG - chr2_3:20224168-20224187 Msa0283190:intron 40.0%
!!! GCAACATTTTGAAACTGAGG+GGG - chr2_3:20224169-20224188 Msa0283190:intron 40.0%
GAATCACTGAAAGCAATACG+TGG - chr2_3:20224440-20224459 Msa0283190:intron 40.0%
CTTGATTGATATCCACAGGT+AGG - chr2_3:20224729-20224748 Msa0283190:intron 40.0%
ATGAAGGAGATAGCCAGTAA+TGG + chr2_3:20224784-20224803 None:intergenic 40.0%
ATCTCCTTCATTGTAGAGGT+TGG - chr2_3:20224793-20224812 Msa0283190:intron 40.0%
ATCTCCAACCTCTACAATGA+AGG + chr2_3:20224800-20224819 None:intergenic 40.0%
CCTTTCAAGAAGCAAATCTG+AGG + chr2_3:20225056-20225075 None:intergenic 40.0%
! CCTCAGATTTGCTTCTTGAA+AGG - chr2_3:20225053-20225072 Msa0283190:intron 40.0%
TCAAGTAACGTCTCTTCTTC+CGG - chr2_3:20225122-20225141 Msa0283190:intron 40.0%
ATCGAGGTAATTACAACTGG+TGG - chr2_3:20225244-20225263 Msa0283190:intron 40.0%
! CAGGGTAGGTTTAATTTCGA+TGG - chr2_3:20225430-20225449 Msa0283190:intron 40.0%
TATGGAGACTACTCAATGTG+AGG - chr2_3:20225521-20225540 Msa0283190:intron 40.0%
ATGGAGACTACTCAATGTGA+GGG - chr2_3:20225522-20225541 Msa0283190:intron 40.0%
!! TTGGGTTGCTTCCGAAGTTT+TGG + chr2_3:20221509-20221528 None:intergenic 45.0%
! GATTAGTCAGTTAAGCCGTG+TGG + chr2_3:20221577-20221596 None:intergenic 45.0%
AACACTTCTACCCACGTGTT+TGG - chr2_3:20221804-20221823 Msa0283190:CDS 45.0%
! TCAACAAGAGTCTCTGGAAG+AGG + chr2_3:20222156-20222175 None:intergenic 45.0%
! GACTTGCTCAAAGAAGAGGT+GGG + chr2_3:20222202-20222221 None:intergenic 45.0%
! CTAGGACTTGCTCAAAGAAG+AGG + chr2_3:20222206-20222225 None:intergenic 45.0%
CTTCCTCAACACCATTGTGT+CGG - chr2_3:20222342-20222361 Msa0283190:five_prime_UTR 45.0%
CCGTTGGATGTAAGAGATGA+AGG + chr2_3:20222422-20222441 None:intergenic 45.0%
TGGTTGAGCATCAAAACCGT+TGG + chr2_3:20222438-20222457 None:intergenic 45.0%
ATGCTCAACCACAACAAGCA+TGG - chr2_3:20222447-20222466 Msa0283190:five_prime_UTR 45.0%
!!! TTTTAGGGCCCTGATCAAGA+TGG + chr2_3:20222508-20222527 None:intergenic 45.0%
! CAACCAGTGGCATTTCCTTT+TGG + chr2_3:20223228-20223247 None:intergenic 45.0%
GCTCCTCCTTTGTATCTATG+AGG + chr2_3:20223283-20223302 None:intergenic 45.0%
GTATCAGGGCTAATCAGCAA+TGG - chr2_3:20223440-20223459 Msa0283190:intron 45.0%
GCAAAAGTGACCCCATGTTT+AGG - chr2_3:20223976-20223995 Msa0283190:intron 45.0%
! CTTTTGACCCCCCTAACATA+AGG - chr2_3:20224009-20224028 Msa0283190:intron 45.0%
!!! CTCAGCAATTTTGGGACGAA+AGG - chr2_3:20224108-20224127 Msa0283190:intron 45.0%
!!! CAGCAATTTTGGGACGAAAG+GGG - chr2_3:20224110-20224129 Msa0283190:intron 45.0%
CTCATAAGTCCTAGCTCAAC+TGG + chr2_3:20224661-20224680 None:intergenic 45.0%
GCATAAGAGAATCCTACCTG+TGG + chr2_3:20224744-20224763 None:intergenic 45.0%
GGCTATCTCCTTCATTGTAG+AGG - chr2_3:20224789-20224808 Msa0283190:intron 45.0%
GCTCCAACTAACGTGAAAGA+AGG - chr2_3:20224861-20224880 Msa0283190:intron 45.0%
GGAAGAAGAGACGTTACTTG+AGG + chr2_3:20225123-20225142 None:intergenic 45.0%
TTCATTCCACCAATGTGTCG+AGG + chr2_3:20225272-20225291 None:intergenic 45.0%
! GGACTTGCTCAAAGAAGAGG+TGG + chr2_3:20222203-20222222 None:intergenic 50.0%
! CATCCGACACAATGGTGTTG+AGG + chr2_3:20222348-20222367 None:intergenic 50.0%
CTCAACACCATTGTGTCGGA+TGG - chr2_3:20222346-20222365 Msa0283190:five_prime_UTR 50.0%
ATTGGGACCATCCGACACAA+TGG + chr2_3:20222356-20222375 None:intergenic 50.0%
GGCTTGATGAGGTCCATCTT+TGG - chr2_3:20222956-20222975 Msa0283190:intron 50.0%
CGACCAAAAGGAAATGCCAC+TGG - chr2_3:20223222-20223241 Msa0283190:intron 50.0%
AGGAGGAGCTCTCAATACAC+TGG - chr2_3:20223294-20223313 Msa0283190:five_prime_UTR 50.0%
!! ATGGATGGGTTAAGAGGTCC+AGG - chr2_3:20223760-20223779 Msa0283190:intron 50.0%
TTAAGAGGTCCAGGTCTCAC+TGG - chr2_3:20223769-20223788 Msa0283190:intron 50.0%
! TGCGATTATGGCCCCTGTTT+TGG - chr2_3:20224070-20224089 Msa0283190:intron 50.0%
! GCGATTATGGCCCCTGTTTT+GGG - chr2_3:20224071-20224090 Msa0283190:intron 50.0%
ACACCACGTGTCCCAAAACA+GGG + chr2_3:20224085-20224104 None:intergenic 50.0%
GTAACCTAGGGTTCGAACTC+CGG - chr2_3:20224600-20224619 Msa0283190:intron 50.0%
GGAGCACATCCCAAGAAACA+TGG + chr2_3:20224846-20224865 None:intergenic 50.0%
TGTTACAGGTTACGGAGCCT+TGG - chr2_3:20225173-20225192 Msa0283190:intron 50.0%
! CTCGGATTGAGGTACCCACA+CGG - chr2_3:20221559-20221578 Msa0283190:CDS 55.0%
TTTCCACTGCCAGTGAGACC+TGG + chr2_3:20223781-20223800 None:intergenic 55.0%
CACCACGTGTCCCAAAACAG+GGG + chr2_3:20224084-20224103 None:intergenic 55.0%
GACACCACGTGTCCCAAAAC+AGG + chr2_3:20224086-20224105 None:intergenic 55.0%
ATGACCGGAGTTCGAACCCT+AGG + chr2_3:20224607-20224626 None:intergenic 55.0%
CGAACTCCGGTCATGACGTC+CGG - chr2_3:20224613-20224632 Msa0283190:intron 60.0%
GTTAGGCCGGACGTCATGAC+CGG + chr2_3:20224622-20224641 None:intergenic 60.0%
CTGGTGGCTCCTCGACACAT+TGG - chr2_3:20225260-20225279 Msa0283190:intron 60.0%
GTGGCTCCTCGACACATTGG+TGG - chr2_3:20225263-20225282 Msa0283190:intron 60.0%
CGATGGTGCAGCGTTGCTCA+TGG - chr2_3:20225447-20225466 Msa0283190:intron 60.0%
GGTCCAGGTCTCACTGGCAG+TGG - chr2_3:20223775-20223794 Msa0283190:intron 65.0%
!!! GGCCCCTGTTTTGGGACACG+TGG - chr2_3:20224079-20224098 Msa0283190:intron 65.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 20221347 20225780 20221347 ID=Msa0283190;Name=Msa0283190
chr2_3 mRNA 20221347 20225780 20221347 ID=Msa0283190-mRNA-1;Parent=Msa0283190;Name=Msa0283190-mRNA-1;_AED=0.05;_eAED=0.05;_QI=1139|1|1|1|1|0.83|6|132|225
chr2_3 exon 20221347 20221946 20221347 ID=Msa0283190-mRNA-1:exon:7942;Parent=Msa0283190-mRNA-1
chr2_3 exon 20222033 20222740 20222033 ID=Msa0283190-mRNA-1:exon:7941;Parent=Msa0283190-mRNA-1
chr2_3 exon 20223280 20223382 20223280 ID=Msa0283190-mRNA-1:exon:7940;Parent=Msa0283190-mRNA-1
chr2_3 exon 20223481 20223693 20223481 ID=Msa0283190-mRNA-1:exon:7939;Parent=Msa0283190-mRNA-1
chr2_3 exon 20223812 20223913 20223812 ID=Msa0283190-mRNA-1:exon:7938;Parent=Msa0283190-mRNA-1
chr2_3 exon 20225558 20225780 20225558 ID=Msa0283190-mRNA-1:exon:7937;Parent=Msa0283190-mRNA-1
chr2_3 five_prime_UTR 20225558 20225780 20225558 ID=Msa0283190-mRNA-1:five_prime_utr;Parent=Msa0283190-mRNA-1
chr2_3 five_prime_UTR 20223812 20223913 20223812 ID=Msa0283190-mRNA-1:five_prime_utr;Parent=Msa0283190-mRNA-1
chr2_3 five_prime_UTR 20223481 20223693 20223481 ID=Msa0283190-mRNA-1:five_prime_utr;Parent=Msa0283190-mRNA-1
chr2_3 five_prime_UTR 20223280 20223382 20223280 ID=Msa0283190-mRNA-1:five_prime_utr;Parent=Msa0283190-mRNA-1
chr2_3 five_prime_UTR 20222243 20222740 20222243 ID=Msa0283190-mRNA-1:five_prime_utr;Parent=Msa0283190-mRNA-1
chr2_3 CDS 20222033 20222242 20222033 ID=Msa0283190-mRNA-1:cds;Parent=Msa0283190-mRNA-1
chr2_3 CDS 20221479 20221946 20221479 ID=Msa0283190-mRNA-1:cds;Parent=Msa0283190-mRNA-1
chr2_3 three_prime_UTR 20221347 20221478 20221347 ID=Msa0283190-mRNA-1:three_prime_utr;Parent=Msa0283190-mRNA-1
Gene Sequence

>Msa0283190

ATGAGTCAGTTGATAAAGTGGGTATCTGAACTTTCGTTGTTTGCAATATCTAAATATAGTCCATTCACTTATGGACTTTCAAGATTGCCTATTGTTCATTGTTTAACCTTTTGTCACTTGTCAAGCTTAGCCCTATATGTTATTCCATACACCCTATATGGAATTGTTCCTCAGATTTGCTTCTTGAAAGGAATACCTGTATTTCCAAAGGTTACGGAGCCTTGGTTTATAGTGTTTACAGTATTGTTTGTATCCAGTCAGATTCAGCATTTTATCGAGGTAATTACAACTGGTGGCTCCTCGACACATTGGTGGAATGAACAAAGAAATGCGATTTTAACATCAATCGGGTGCGTTTTTGCAATTATAGAAGCAACAAAAAAATGGTTTGGGTTGAACAAGGCAAAATTCACTTTATCTGACAAAGCAATTGACAAAGATACTCAAAAGAAATATGAGCAGGGTAGGTTTAATTTCGATGGTGCAGCGTTGCTCATGGCACCAATGATTGTGTTACTCATACTAAATATTGTTTGCTTCTTTGGTGGTTTATGGAGACTACTCAATGTGAGGGATTTTGATGAAATGTTTGGTCAAGTTTTCCTTATTAGCTATGTAATGGCTCTAAGCTATCCTATTCTAGAGGGGATTATAACTATGAAAACAAAGGGTGGGTAG
Protein sequence

>Msa0283190

MSQLIKWVSELSLFAISKYSPFTYGLSRLPIVHCLTFCHLSSLALYVIPYTLYGIVPQICFLKGIPVFPKVTEPWFIVFTVLFVSSQIQHFIEVITTGGSSTHWWNEQRNAILTSIGCVFAIIEATKKWFGLNKAKFTLSDKAIDKDTQKKYEQGRFNFDGAALLMAPMIVLLILNIVCFFGGLWRLLNVRDFDEMFGQVFLISYVMALSYPILEGIITMKTKGG*