AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0285030

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0285030 MtrunA17_Chr5g0405131 92.063 63 5 0 1 63 1 63 1.13e-35 118
Msa0285030 MtrunA17_Chr8g0334871 77.612 67 11 1 1 63 111 177 1.29e-30 108
Msa0285030 MtrunA17_Chr7g0232961 71.429 56 16 0 8 63 142 197 2.49e-21 84.3
Msa0285030 MtrunA17_Chr7g0232491 66.071 56 19 0 8 63 114 169 3.57e-19 78.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0285030 AT3G60420.1 57.895 57 24 0 7 63 123 179 3.69e-16 70.5
Msa0285030 AT3G60450.2 55.357 56 25 0 8 63 142 197 7.72e-16 70.1
Msa0285030 AT3G60450.1 55.357 56 25 0 8 63 110 165 7.76e-16 69.7
Msa0285030 AT3G60440.2 53.571 56 26 0 8 63 133 188 4.21e-14 64.7
Msa0285030 AT3G60440.1 53.571 56 26 0 8 63 133 188 8.02e-14 64.3
Msa0285030 AT3G60415.1 43.836 73 32 1 8 71 109 181 3.14e-13 62.4

Find 49 sgRNAs with CRISPR-Local

Find 139 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGCAGGTCTCTGTAGAATA+TGG 0.240516 2_3:+24120107 Msa0285030:CDS
TGGCTCCTAAAGATGAAAAT+TGG 0.260885 2_3:+24120171 Msa0285030:CDS
CCTTTGCTTGTAATATTTAC+CGG 0.308150 2_3:-24121841 None:intergenic
GGCTCCTAAAGATGAAAATT+GGG 0.366205 2_3:+24120172 Msa0285030:CDS
GGCAATCGTTTCCGCCGCTC+TGG 0.406900 2_3:+24119634 Msa0285030:five_prime_UTR
TGATGAGCCGGAGGGCAATT+AGG 0.415742 2_3:+24120141 Msa0285030:CDS
AGAGCGGCGGAAACGATTGC+CGG 0.448782 2_3:-24119632 None:intergenic
CGTGAGGCCATGCTTCCTGC+AGG 0.455082 2_3:+24120212 Msa0285030:CDS
AGACAATGGATCACATTGTT+GGG 0.461566 2_3:-24119959 None:intergenic
GAGGAACGCTGGAGCAGAAA+AGG 0.473807 2_3:+24119340 Msa0285030:five_prime_UTR
CAGACAATGGATCACATTGT+TGG 0.474510 2_3:-24119960 None:intergenic
TTCAACGGCGACCGGTGCAC+CGG 0.494823 2_3:+24119613 Msa0285030:five_prime_UTR
AAGAGAGACGGCGAGAGGAG+AGG 0.501706 2_3:+24119409 Msa0285030:five_prime_UTR
TGCAGGTCTCTGTAGAATAT+GGG 0.508561 2_3:+24120108 Msa0285030:CDS
GATATTGTGCAGACATATAC+CGG 0.514915 2_3:+24121822 Msa0285030:intron
CTGCAGTTGTGGAAGAGAGT+TGG 0.517648 2_3:-24120090 None:intergenic
ATTCATCATGCTTTGTTGAG+TGG 0.519397 2_3:+24119933 Msa0285030:five_prime_UTR
CAACTCTCTTCCACAACTGC+AGG 0.519772 2_3:+24120091 Msa0285030:CDS
CACTGTCCCTGCAGGAAGCA+TGG 0.520311 2_3:-24120219 None:intergenic
TTGTTATCCACTGTCCCTGC+AGG 0.531343 2_3:-24120227 None:intergenic
AGTGGATAACAATGTAGAAA+GGG 0.541133 2_3:+24120238 Msa0285030:CDS
GGAGCAACTTCAACGGCGAC+CGG 0.542178 2_3:+24119605 Msa0285030:five_prime_UTR
CAGTGGATAACAATGTAGAA+AGG 0.543991 2_3:+24120237 Msa0285030:CDS
AGGAGAGGAAAGTGTTGTGT+TGG 0.553945 2_3:+24119424 Msa0285030:five_prime_UTR
TCTACAGAGACCTGCAGTTG+TGG 0.555743 2_3:-24120101 None:intergenic
GGAAACGATTGCCGGTGCAC+CGG 0.557749 2_3:-24119624 None:intergenic
TGTAGAAAGGGTCTATAAAG+AGG 0.560431 2_3:+24120250 Msa0285030:CDS
CCGGTAAATATTACAAGCAA+AGG 0.568772 2_3:+24121841 Msa0285030:CDS
AAAGAGGAAAGGAGGAACGC+TGG 0.572269 2_3:+24119329 Msa0285030:five_prime_UTR
CCTCAAGCCTAATTGCCCTC+CGG 0.574132 2_3:-24120148 None:intergenic
AGATCGATTGAAGCAATGAA+AGG 0.576201 2_3:+24119860 Msa0285030:five_prime_UTR
AACGAAAGAGAGACGGCGAG+AGG 0.594423 2_3:+24119404 Msa0285030:five_prime_UTR
AGAGACGGGAACGAGAGAGA+AGG 0.594857 2_3:+24119292 None:intergenic
GCTGGAGCAGAAAAGGAAAA+CGG 0.595838 2_3:+24119347 Msa0285030:five_prime_UTR
CCGGAGGGCAATTAGGCTTG+AGG 0.610283 2_3:+24120148 Msa0285030:CDS
GAGGGCAATTAGGCTTGAGG+TGG 0.611737 2_3:+24120151 Msa0285030:CDS
TTGGATCGGAGCAACTTCAA+CGG 0.616745 2_3:+24119598 Msa0285030:five_prime_UTR
CATGCTTCCTGCAGGGACAG+TGG 0.620249 2_3:+24120220 Msa0285030:CDS
GCTCCTAAAGATGAAAATTG+GGG 0.633816 2_3:+24120173 Msa0285030:CDS
GGTTATGTGAAATGATGAGC+CGG 0.636708 2_3:+24120129 Msa0285030:CDS
GTGAGGCCATGCTTCCTGCA+GGG 0.637114 2_3:+24120213 Msa0285030:CDS
TTTCAACATATCAGAGCGTG+AGG 0.644870 2_3:+24120196 Msa0285030:CDS
AGGTGAAAACGAAAGAGAGA+CGG 0.651922 2_3:+24119397 Msa0285030:five_prime_UTR
TATGTGAAATGATGAGCCGG+AGG 0.656757 2_3:+24120132 Msa0285030:CDS
TGATTCAAAATCCAGAGCGG+CGG 0.657362 2_3:-24119645 None:intergenic
ACGAGAGAGAAGGAACTCGA+CGG 0.675133 2_3:+24119302 Msa0285030:five_prime_UTR
ATGTGAAATGATGAGCCGGA+GGG 0.678863 2_3:+24120133 Msa0285030:CDS
AATGAAATGAATGAAGACCA+AGG 0.691600 2_3:+24119456 Msa0285030:five_prime_UTR
TTCTGATTCAAAATCCAGAG+CGG 0.728940 2_3:-24119648 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATATATATATATATA+TGG + chr2_3:24121296-24121315 Msa0285030:intron 0.0%
!! ATATATATATATATATATAT+GGG + chr2_3:24121297-24121316 Msa0285030:intron 0.0%
!!! ATGTTTGTTTATTTTTAAAA+GGG + chr2_3:24119792-24119811 Msa0285030:intron 10.0%
!! ATATATATATATATATATGG+GGG + chr2_3:24121321-24121340 Msa0285030:intron 10.0%
!! TTAATGAATATTAGAATTAA+AGG - chr2_3:24121394-24121413 None:intergenic 10.0%
!! TTAATTCTAATATTCATTAA+TGG + chr2_3:24121394-24121413 Msa0285030:intron 10.0%
!!! GATGTTTGTTTATTTTTAAA+AGG + chr2_3:24119791-24119810 Msa0285030:intron 15.0%
!!! TTTCAATTGCAAAATATTTT+TGG + chr2_3:24120293-24120312 Msa0285030:intron 15.0%
!! TGAAGAAAAAAAAAATTGTT+AGG + chr2_3:24120396-24120415 Msa0285030:intron 15.0%
!!! CTATTCTTTTTAAAATCAAT+TGG + chr2_3:24120892-24120911 Msa0285030:intron 15.0%
!!! ACACTTTTATAAAAATTAGT+TGG - chr2_3:24121185-24121204 None:intergenic 15.0%
!! AAAAAATAAAAACTCTTTCA+TGG + chr2_3:24121590-24121609 Msa0285030:intron 15.0%
!!! TTTTGATTAAACAAAAGATG+AGG - chr2_3:24119488-24119507 None:intergenic 20.0%
!! GTTTAATCAAAAATCATGAT+CGG + chr2_3:24119496-24119515 Msa0285030:intron 20.0%
!!! TTTGTTTTTCCAGAATTTTT+TGG + chr2_3:24119579-24119598 Msa0285030:intron 20.0%
!!! GTTTTTTCGTTTTTAAGTTA+TGG + chr2_3:24119753-24119772 Msa0285030:intron 20.0%
!!! GTTATGGTTTTATTTTGAAT+TGG + chr2_3:24119769-24119788 Msa0285030:intron 20.0%
!!! ATCATTACTTTTTGTGTTTA+TGG + chr2_3:24120338-24120357 Msa0285030:intron 20.0%
!! AATCCTTAAGATTCATAATA+TGG + chr2_3:24120555-24120574 Msa0285030:intron 20.0%
!! AAAAACATTAAACTTAAGCT+CGG - chr2_3:24120835-24120854 None:intergenic 20.0%
!! GAATATTAGAATTAAAGGTT+AGG - chr2_3:24121389-24121408 None:intergenic 20.0%
!! ATGGCTAAGATTAATTAATT+TGG + chr2_3:24121413-24121432 Msa0285030:intron 20.0%
!!! CTAAGATTAATTAATTTGGT+AGG + chr2_3:24121417-24121436 Msa0285030:intron 20.0%
!!! AATTGCTTTGTTTTTTTTTG+TGG - chr2_3:24121480-24121499 None:intergenic 20.0%
! CTGAAGTGAAAAATGAAAAT+TGG + chr2_3:24119370-24119389 Msa0285030:five_prime_UTR 25.0%
! GAAAAATGAAAATTGGAAGA+AGG + chr2_3:24119377-24119396 Msa0285030:five_prime_UTR 25.0%
!! ATTCTGGAAAAACAAAAACT+TGG - chr2_3:24119575-24119594 None:intergenic 25.0%
!!! TTTTCCAGAATTTTTTGGAT+CGG + chr2_3:24119584-24119603 Msa0285030:intron 25.0%
! ATTGTCATGACATAAAATTG+GGG - chr2_3:24119691-24119710 None:intergenic 25.0%
! GATTGTCATGACATAAAATT+GGG - chr2_3:24119692-24119711 None:intergenic 25.0%
! TGATTGTCATGACATAAAAT+TGG - chr2_3:24119693-24119712 None:intergenic 25.0%
! AACGAAAAAACACAGTAAAA+AGG - chr2_3:24119744-24119763 None:intergenic 25.0%
! AAAGTTTAAAGATGACGAAA+TGG - chr2_3:24120011-24120030 None:intergenic 25.0%
! TTCTTCACATCAGTTAAAAT+GGG - chr2_3:24120383-24120402 None:intergenic 25.0%
! TTTCTTCACATCAGTTAAAA+TGG - chr2_3:24120384-24120403 None:intergenic 25.0%
! AAGAATGTTCAAATAAGATG+AGG + chr2_3:24120453-24120472 Msa0285030:intron 25.0%
! AGAATGTTCAAATAAGATGA+GGG + chr2_3:24120454-24120473 Msa0285030:intron 25.0%
! AAGCCATATTATGAATCTTA+AGG - chr2_3:24120561-24120580 None:intergenic 25.0%
! TTCTTCCAAAAAATCTGAAT+TGG + chr2_3:24120636-24120655 Msa0285030:intron 25.0%
! GTCATCTATAAGAAAACAAT+AGG - chr2_3:24120685-24120704 None:intergenic 25.0%
!! ATTGTTTTCTTATAGATGAC+AGG + chr2_3:24120685-24120704 Msa0285030:intron 25.0%
! ATCTCAATTGTTTCATACTT+TGG + chr2_3:24120983-24121002 Msa0285030:intron 25.0%
!!! TTCTTACTTTTGTGTTATCT+TGG + chr2_3:24121009-24121028 Msa0285030:intron 25.0%
! GCAAAGTTATAACTAAAAAG+TGG + chr2_3:24121211-24121230 Msa0285030:intron 25.0%
!! ATTTCTAAAAGACACATTCA+TGG + chr2_3:24121255-24121274 Msa0285030:intron 25.0%
!! TTTCTAAAAGACACATTCAT+GGG + chr2_3:24121256-24121275 Msa0285030:intron 25.0%
! ACGCTAAAAGAAATTGAAAA+AGG + chr2_3:24121557-24121576 Msa0285030:intron 25.0%
! CGCTAAAAGAAATTGAAAAA+GGG + chr2_3:24121558-24121577 Msa0285030:intron 25.0%
! AAAAAGAAGATTCAAAGAGA+AGG + chr2_3:24121678-24121697 Msa0285030:intron 25.0%
! ATGTCAACTGTTTGAATATT+TGG + chr2_3:24121798-24121817 Msa0285030:intron 25.0%
! TGTCAACTGTTTGAATATTT+GGG + chr2_3:24121799-24121818 Msa0285030:intron 25.0%
AATGAAATGAATGAAGACCA+AGG + chr2_3:24119456-24119475 Msa0285030:five_prime_UTR 30.0%
AAAAGATGAGGAAATTACCT+TGG - chr2_3:24119476-24119495 None:intergenic 30.0%
AACATTACCAACCATTAAGT+TGG + chr2_3:24120058-24120077 Msa0285030:intron 30.0%
AACATTACCAACTTAATGGT+TGG - chr2_3:24120068-24120087 None:intergenic 30.0%
! AAACCCCAATTTTCATCTTT+AGG - chr2_3:24120179-24120198 None:intergenic 30.0%
AGTGGATAACAATGTAGAAA+GGG + chr2_3:24120238-24120257 Msa0285030:CDS 30.0%
TCATTTAAGTGTTTGTGAGA+TGG + chr2_3:24120754-24120773 Msa0285030:intron 30.0%
! GACAAAGGATATTTTTCACA+AGG + chr2_3:24120776-24120795 Msa0285030:intron 30.0%
!! TTTTAGAAATCTACACCTCA+AGG - chr2_3:24121245-24121264 None:intergenic 30.0%
TAAGTTAACACACTTACTCT+TGG - chr2_3:24121358-24121377 None:intergenic 30.0%
! TTTCAATTTCTTTTAGCGTG+AGG - chr2_3:24121556-24121575 None:intergenic 30.0%
GTCAACTGTTTGAATATTTG+GGG + chr2_3:24121800-24121819 Msa0285030:intron 30.0%
CCTTTGCTTGTAATATTTAC+CGG - chr2_3:24121844-24121863 None:intergenic 30.0%
TTCTGATTCAAAATCCAGAG+CGG - chr2_3:24119651-24119670 None:intergenic 35.0%
AGATCGATTGAAGCAATGAA+AGG + chr2_3:24119860-24119879 Msa0285030:five_prime_UTR 35.0%
! ATTCATCATGCTTTGTTGAG+TGG + chr2_3:24119933-24119952 Msa0285030:five_prime_UTR 35.0%
AGACAATGGATCACATTGTT+GGG - chr2_3:24119962-24119981 None:intergenic 35.0%
GTTTAAAGATGACGAAATGG+AGG - chr2_3:24120008-24120027 None:intergenic 35.0%
GGAGAACATTACCAACTTAA+TGG - chr2_3:24120072-24120091 None:intergenic 35.0%
TGGCTCCTAAAGATGAAAAT+TGG + chr2_3:24120171-24120190 Msa0285030:CDS 35.0%
GGCTCCTAAAGATGAAAATT+GGG + chr2_3:24120172-24120191 Msa0285030:CDS 35.0%
GCTCCTAAAGATGAAAATTG+GGG + chr2_3:24120173-24120192 Msa0285030:CDS 35.0%
CAGTGGATAACAATGTAGAA+AGG + chr2_3:24120237-24120256 Msa0285030:CDS 35.0%
TGTAGAAAGGGTCTATAAAG+AGG + chr2_3:24120250-24120269 Msa0285030:CDS 35.0%
! GGGTCTATAAAGAGGTATAA+TGG + chr2_3:24120258-24120277 Msa0285030:intron 35.0%
!!! CCTATCCTTTTCTAGAGTTT+GGG - chr2_3:24120507-24120526 None:intergenic 35.0%
!!! ACCTATCCTTTTCTAGAGTT+TGG - chr2_3:24120508-24120527 None:intergenic 35.0%
AGGATAGGTCAAATAAGATG+AGG + chr2_3:24120519-24120538 Msa0285030:intron 35.0%
!!! GAGCTCCAATTCAGATTTTT+TGG - chr2_3:24120644-24120663 None:intergenic 35.0%
AAAGCACACTTCTTCAAAGA+TGG - chr2_3:24120920-24120939 None:intergenic 35.0%
! TTTTGTGTTATCTTGGCCAT+GGG + chr2_3:24121016-24121035 Msa0285030:intron 35.0%
GCTTTAATTGCATGCTCTAT+TGG + chr2_3:24121439-24121458 Msa0285030:intron 35.0%
GACACAAGAATTGCTAAATG+TGG + chr2_3:24121775-24121794 Msa0285030:intron 35.0%
GATATTGTGCAGACATATAC+CGG + chr2_3:24121822-24121841 Msa0285030:intron 35.0%
CCGGTAAATATTACAAGCAA+AGG + chr2_3:24121841-24121860 Msa0285030:CDS 35.0%
AGGTGAAAACGAAAGAGAGA+CGG + chr2_3:24119397-24119416 Msa0285030:five_prime_UTR 40.0%
TGTTGCTATGCATGTTCGAT+TGG + chr2_3:24119545-24119564 Msa0285030:intron 40.0%
TGCTCCGATCCAAAAAATTC+TGG - chr2_3:24119591-24119610 None:intergenic 40.0%
!! GCTCTGGATTTTGAATCAGA+AGG + chr2_3:24119650-24119669 Msa0285030:five_prime_UTR 40.0%
CAGACAATGGATCACATTGT+TGG - chr2_3:24119963-24119982 None:intergenic 40.0%
ATGGAGGTAATTCAACTGGA+GGG - chr2_3:24119992-24120011 None:intergenic 40.0%
AATGGAGGTAATTCAACTGG+AGG - chr2_3:24119993-24120012 None:intergenic 40.0%
CGAAATGGAGGTAATTCAAC+TGG - chr2_3:24119996-24120015 None:intergenic 40.0%
TGCAGGTCTCTGTAGAATAT+GGG + chr2_3:24120108-24120127 Msa0285030:CDS 40.0%
GGTTATGTGAAATGATGAGC+CGG + chr2_3:24120129-24120148 Msa0285030:CDS 40.0%
TTTCAACATATCAGAGCGTG+AGG + chr2_3:24120196-24120215 Msa0285030:CDS 40.0%
! ATGAGCCCAAACTCTAGAAA+AGG + chr2_3:24120499-24120518 Msa0285030:intron 40.0%
! CCCAAACTCTAGAAAAGGAT+AGG + chr2_3:24120504-24120523 Msa0285030:intron 40.0%
AGTGTTTGTGAGATGGACAA+AGG + chr2_3:24120761-24120780 Msa0285030:intron 40.0%
! CTTTTGTGTTATCTTGGCCA+TGG + chr2_3:24121015-24121034 Msa0285030:intron 40.0%
AAAGTGGAAATCACACCTTG+AGG + chr2_3:24121227-24121246 Msa0285030:intron 40.0%
TCGACGGCAAAAAAGAGGAA+AGG + chr2_3:24119318-24119337 Msa0285030:five_prime_UTR 45.0%
ACGGCAAAAAAGAGGAAAGG+AGG + chr2_3:24119321-24119340 Msa0285030:five_prime_UTR 45.0%
GCTGGAGCAGAAAAGGAAAA+CGG + chr2_3:24119347-24119366 Msa0285030:five_prime_UTR 45.0%
!! AGGAGAGGAAAGTGTTGTGT+TGG + chr2_3:24119424-24119443 Msa0285030:five_prime_UTR 45.0%
TTGGATCGGAGCAACTTCAA+CGG + chr2_3:24119598-24119617 Msa0285030:five_prime_UTR 45.0%
TGATTCAAAATCCAGAGCGG+CGG - chr2_3:24119648-24119667 None:intergenic 45.0%
TGGAGGGATATCACAGACAA+TGG - chr2_3:24119976-24119995 None:intergenic 45.0%
CTGCAGGTCTCTGTAGAATA+TGG + chr2_3:24120107-24120126 Msa0285030:CDS 45.0%
TATGTGAAATGATGAGCCGG+AGG + chr2_3:24120132-24120151 Msa0285030:CDS 45.0%
ATGTGAAATGATGAGCCGGA+GGG + chr2_3:24120133-24120152 Msa0285030:CDS 45.0%
AAACTATCACCATGCTCCCA+TGG - chr2_3:24121035-24121054 None:intergenic 45.0%
!! TATTTCATTTATTTATAATA+TGG + chr2_3:24120612-24120631 Msa0285030:intron 5.0%
!! TATATATATATATATATATG+GGG + chr2_3:24121320-24121339 Msa0285030:intron 5.0%
ACGAGAGAGAAGGAACTCGA+CGG + chr2_3:24119302-24119321 Msa0285030:five_prime_UTR 50.0%
GGAACTCGACGGCAAAAAAG+AGG + chr2_3:24119313-24119332 Msa0285030:five_prime_UTR 50.0%
AAAGAGGAAAGGAGGAACGC+TGG + chr2_3:24119329-24119348 Msa0285030:five_prime_UTR 50.0%
CTGCAGTTGTGGAAGAGAGT+TGG - chr2_3:24120093-24120112 None:intergenic 50.0%
CAACTCTCTTCCACAACTGC+AGG + chr2_3:24120091-24120110 Msa0285030:CDS 50.0%
TCTACAGAGACCTGCAGTTG+TGG - chr2_3:24120104-24120123 None:intergenic 50.0%
TTGTTATCCACTGTCCCTGC+AGG - chr2_3:24120230-24120249 None:intergenic 50.0%
TTATCTTGGCCATGGGAGCA+TGG + chr2_3:24121023-24121042 Msa0285030:intron 50.0%
GAGGAACGCTGGAGCAGAAA+AGG + chr2_3:24119340-24119359 Msa0285030:five_prime_UTR 55.0%
AACGAAAGAGAGACGGCGAG+AGG + chr2_3:24119404-24119423 Msa0285030:five_prime_UTR 55.0%
TGATGAGCCGGAGGGCAATT+AGG + chr2_3:24120141-24120160 Msa0285030:CDS 55.0%
CCTCAAGCCTAATTGCCCTC+CGG - chr2_3:24120151-24120170 None:intergenic 55.0%
GAGGGCAATTAGGCTTGAGG+TGG + chr2_3:24120151-24120170 Msa0285030:CDS 55.0%
AAGAGAGACGGCGAGAGGAG+AGG + chr2_3:24119409-24119428 Msa0285030:five_prime_UTR 60.0%
GGAGCAACTTCAACGGCGAC+CGG + chr2_3:24119605-24119624 Msa0285030:five_prime_UTR 60.0%
GGAAACGATTGCCGGTGCAC+CGG - chr2_3:24119627-24119646 None:intergenic 60.0%
AGAGCGGCGGAAACGATTGC+CGG - chr2_3:24119635-24119654 None:intergenic 60.0%
CCGGAGGGCAATTAGGCTTG+AGG + chr2_3:24120148-24120167 Msa0285030:CDS 60.0%
GTGAGGCCATGCTTCCTGCA+GGG + chr2_3:24120213-24120232 Msa0285030:CDS 60.0%
CACTGTCCCTGCAGGAAGCA+TGG - chr2_3:24120222-24120241 None:intergenic 60.0%
CATGCTTCCTGCAGGGACAG+TGG + chr2_3:24120220-24120239 Msa0285030:CDS 60.0%
TTCAACGGCGACCGGTGCAC+CGG + chr2_3:24119613-24119632 Msa0285030:five_prime_UTR 65.0%
GGCAATCGTTTCCGCCGCTC+TGG + chr2_3:24119634-24119653 Msa0285030:five_prime_UTR 65.0%
CGTGAGGCCATGCTTCCTGC+AGG + chr2_3:24120212-24120231 Msa0285030:CDS 65.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 24119297 24121872 24119297 ID=Msa0285030;Name=Msa0285030
chr2_3 mRNA 24119297 24121872 24119297 ID=Msa0285030-mRNA-1;Parent=Msa0285030;Name=Msa0285030-mRNA-1;_AED=0.24;_eAED=0.24;_QI=400|0.75|0.8|0.8|0.25|0.4|5|0|75
chr2_3 exon 24119297 24119477 24119297 ID=Msa0285030-mRNA-1:exon:9152;Parent=Msa0285030-mRNA-1
chr2_3 exon 24119592 24119671 24119592 ID=Msa0285030-mRNA-1:exon:9153;Parent=Msa0285030-mRNA-1
chr2_3 exon 24119845 24119977 24119845 ID=Msa0285030-mRNA-1:exon:9154;Parent=Msa0285030-mRNA-1
chr2_3 exon 24120077 24120271 24120077 ID=Msa0285030-mRNA-1:exon:9155;Parent=Msa0285030-mRNA-1
chr2_3 exon 24121834 24121872 24121834 ID=Msa0285030-mRNA-1:exon:9156;Parent=Msa0285030-mRNA-1
chr2_3 five_prime_UTR 24119297 24119477 24119297 ID=Msa0285030-mRNA-1:five_prime_utr;Parent=Msa0285030-mRNA-1
chr2_3 five_prime_UTR 24119592 24119671 24119592 ID=Msa0285030-mRNA-1:five_prime_utr;Parent=Msa0285030-mRNA-1
chr2_3 five_prime_UTR 24119845 24119977 24119845 ID=Msa0285030-mRNA-1:five_prime_utr;Parent=Msa0285030-mRNA-1
chr2_3 five_prime_UTR 24120077 24120082 24120077 ID=Msa0285030-mRNA-1:five_prime_utr;Parent=Msa0285030-mRNA-1
chr2_3 CDS 24120083 24120271 24120083 ID=Msa0285030-mRNA-1:cds;Parent=Msa0285030-mRNA-1
chr2_3 CDS 24121834 24121872 24121834 ID=Msa0285030-mRNA-1:cds;Parent=Msa0285030-mRNA-1
Gene Sequence

>Msa0285030

ATGTTCTCCAACTCTCTTCCACAACTGCAGGTCTCTGTAGAATATGGGTTATGTGAAATGATGAGCCGGAGGGCAATTAGGCTTGAGGTGGCTCCTAAAGATGAAAATTGGGGTTTCAACATATCAGAGCGTGAGGCCATGCTTCCTGCAGGGACAGTGGATAACAATGTAGAAAGGGTCTATAAAGAGACATATACCGGTAAATATTACAAGCAAAGGACATCTTGA
Protein sequence

>Msa0285030

MFSNSLPQLQVSVEYGLCEMMSRRAIRLEVAPKDENWGFNISEREAMLPAGTVDNNVERVYKETYTGKYYKQRTS*