AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0411160

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0411160 MtrunA17_Chr3g0102341 87.786 786 40 6 1 732 1 784 0.0 1021
Msa0411160 MtrunA17_Chr5g0446481 43.086 687 279 17 1 594 1 668 1.60e-94 315
Msa0411160 MtrunA17_Chr5g0446481 57.529 259 102 6 476 732 700 952 5.87e-54 201
Msa0411160 MtrunA17_Chr3g0132011 35.012 417 205 10 355 724 91 488 2.14e-46 174
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0411160 AT4G26630.2 46.169 522 194 15 275 732 236 734 1.18e-93 309
Msa0411160 AT4G26630.1 46.169 522 194 15 275 732 236 734 1.18e-93 309
Msa0411160 AT5G55660.1 46.593 455 181 11 330 731 297 742 4.44e-85 286
Msa0411160 AT3G48710.1 32.697 419 196 10 355 724 53 434 2.09e-42 160
Msa0411160 AT5G63550.1 41.885 191 69 3 357 507 95 283 1.69e-33 136
Msa0411160 AT5G63550.2 41.667 192 69 4 357 507 95 284 3.93e-32 132
Msa0411160 AT1G64253.3 58.182 55 23 0 675 729 130 184 8.78e-12 65.1
Msa0411160 AT1G64253.2 58.182 55 23 0 675 729 262 316 4.18e-11 65.5
Msa0411160 AT1G64253.1 58.182 55 23 0 675 729 338 392 6.07e-11 65.5

Find 200 sgRNAs with CRISPR-Local

Find 617 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTCATCCTCTTCCATTTCT+TGG 0.132393 3_2:-53302562 None:intergenic
CTTTGAAGTTGACACCTTTC+TGG 0.145473 3_2:+53309984 Msa0411160:three_prime_UTR
AGGGAAGATAAGAGTGATTC+TGG 0.195751 3_2:+53307905 Msa0411160:CDS
AGTAGAAAGCTTACAGATTC+AGG 0.236553 3_2:-53301047 None:intergenic
CGATCACTAGTTGGAGTCTT+TGG 0.269151 3_2:-53302995 None:intergenic
AAGCTTACAGATTCAGGATT+TGG 0.299852 3_2:-53301041 None:intergenic
GCATTTACCAGCTTTCTCTT+TGG 0.300814 3_2:-53308206 None:intergenic
TTGGTATTTGATGATTTCTT+AGG 0.302048 3_2:-53308064 None:intergenic
TTTCTTTGCAGATGATGTTT+TGG 0.306714 3_2:-53307966 None:intergenic
TAATCCTTTGCAGGCAGTTC+AGG 0.306825 3_2:+53304934 Msa0411160:intron
GATTTCTTAGGTGCTCTCTT+AGG 0.310357 3_2:-53308052 None:intergenic
CATAATTTAGTGCAGCCTTT+TGG 0.323313 3_2:+53309849 Msa0411160:three_prime_UTR
AAGGAAATCAGTTGAGAGAT+TGG 0.324108 3_2:+53303030 Msa0411160:CDS
ATTGATAATTTCTTATTGTT+AGG 0.334361 3_2:+53310011 Msa0411160:three_prime_UTR
GGAAGAAGTAAAAGATGATA+TGG 0.337785 3_2:+53302490 Msa0411160:CDS
GCTAGTACTTCAAGAGGTTC+TGG 0.338404 3_2:+53306077 Msa0411160:CDS
TGAATCTGAGAATGAGAAAA+TGG 0.338891 3_2:+53302595 Msa0411160:CDS
TTCTTCCTAGAAAATACCTT+TGG 0.355080 3_2:-53308118 None:intergenic
GAAGGAAGAGGGCGATGAAA+AGG 0.357929 3_2:+53302787 Msa0411160:CDS
TTGTTCCATACAATCCTCTT+TGG 0.361293 3_2:+53304682 Msa0411160:CDS
ACTATCATCAGTCTTCCTTC+TGG 0.367147 3_2:-53304653 None:intergenic
AGACCGGTCTTCATCTTTCT+CGG 0.371584 3_2:-53309648 None:intergenic
ACTGATTTCCTTTCTCGCAC+TGG 0.372574 3_2:-53303019 None:intergenic
GGAAGAAGTAAAAGAGGATA+AGG 0.387155 3_2:+53302418 Msa0411160:CDS
AGCTTTCTCTTTGGACTTTG+AGG 0.390801 3_2:-53308197 None:intergenic
AGCGTTCCGGTGAAATCATT+GGG 0.398650 3_2:+53301987 Msa0411160:CDS
ATCATCATCGGACTTTGGTT+TGG 0.407150 3_2:-53308083 None:intergenic
TTTGAAGTTGACACCTTTCT+GGG 0.408089 3_2:+53309985 Msa0411160:three_prime_UTR
TCCTTCCAAAGAGGATTGTA+TGG 0.410961 3_2:-53304687 None:intergenic
CTCCTCATTAACCTTCCCTC+TGG 0.412333 3_2:-53302933 None:intergenic
TGATGATGACATCCAAGAAA+TGG 0.412541 3_2:+53302550 Msa0411160:CDS
AGAGACGGAGGAGGAGGAGG+AGG 0.415078 3_2:+53302823 Msa0411160:CDS
GTTTGTTGTTCTCTTCAGAT+TGG 0.419185 3_2:-53309815 None:intergenic
ACAATCAACAGTCAGGCTTA+AGG 0.420468 3_2:-53309675 None:intergenic
GACTTTGAGGAAGACTTAGT+TGG 0.426096 3_2:-53308184 None:intergenic
CTATCTAAGCAAGATCAGTA+TGG 0.429412 3_2:+53301914 Msa0411160:exon
CTAAGCAGAAAAGGTTACTA+AGG 0.430405 3_2:+53308435 Msa0411160:intron
CTAGTTGGAGTCTTTGGCTC+TGG 0.431846 3_2:-53302989 None:intergenic
CTGATTTCCTTTCTCGCACT+GGG 0.433261 3_2:-53303018 None:intergenic
GGATGTTGATGCTGAGGTTA+AGG 0.436639 3_2:+53302616 Msa0411160:CDS
CCTTTCAATTTGCAGGGTCG+TGG 0.437186 3_2:+53303181 Msa0411160:intron
GAAGAAGATAAGAAAGTTGA+GGG 0.441554 3_2:+53302107 Msa0411160:CDS
AGGATAAGAAAGATGAAGAT+GGG 0.442056 3_2:+53302147 Msa0411160:CDS
AAAGAGGAGAAGAAAGATGA+TGG 0.445699 3_2:+53302392 Msa0411160:CDS
ATCCTCCTCTTCATCTTCCT+CGG 0.445829 3_2:-53309624 None:intergenic
ACCGACATTCTGAAACTACT+TGG 0.448158 3_2:+53308756 Msa0411160:CDS
TAGCGTTCCGGTGAAATCAT+TGG 0.451566 3_2:+53301986 Msa0411160:CDS
AAAGAGGATAAGGAAGTTGA+TGG 0.453853 3_2:+53302428 Msa0411160:CDS
AGCAGAGACGGAGGAGGAGG+AGG 0.454107 3_2:+53302820 Msa0411160:CDS
TTCAAATGGAGGTAGCGTTC+CGG 0.454980 3_2:+53301974 Msa0411160:CDS
TACAGAAGATAAAGAAGAAA+AGG 0.455304 3_2:+53302643 Msa0411160:CDS
CTTTGCAATGTGTAATTCCT+TGG 0.455309 3_2:-53303077 None:intergenic
GAAAACTGAAGTAGAGGAGA+AGG 0.456878 3_2:+53302721 Msa0411160:CDS
TGAAGCAGAGACGGAGGAGG+AGG 0.457761 3_2:+53302817 Msa0411160:CDS
TCAATATCATCATCGGACTT+TGG 0.461292 3_2:-53308088 None:intergenic
GAGGATAAGAAAGATGAAGA+TGG 0.461328 3_2:+53302146 Msa0411160:CDS
GAGGAAGACTTAGTTGGAGT+TGG 0.462737 3_2:-53308178 None:intergenic
GGGAAGATAAGAGTGATTCT+GGG 0.463928 3_2:+53307906 Msa0411160:CDS
AGATAAGGCAGAGGGTAGTA+AGG 0.465340 3_2:+53302886 Msa0411160:CDS
GAAAGTTGAGGGTGTGGAAA+AGG 0.466680 3_2:+53302118 Msa0411160:CDS
GTTGTTCTCTTCAGATTGGA+TGG 0.470961 3_2:-53309811 None:intergenic
TAAAGAAGTTGACTTCAATA+CGG 0.473503 3_2:+53308531 Msa0411160:CDS
AAAGAGGAGAAGAAAGATGA+AGG 0.475472 3_2:+53302356 Msa0411160:CDS
TTAGGTGCTCTCTTAGGTGG+TGG 0.477724 3_2:-53308046 None:intergenic
GAAAAGGTTACTAAGGGAAA+AGG 0.483043 3_2:+53308442 Msa0411160:intron
CGCACTGGGCGATCACTAGT+TGG 0.484606 3_2:-53303004 None:intergenic
GTGATCGCCCAGTGCGAGAA+AGG 0.487231 3_2:+53303011 Msa0411160:CDS
GTTTCATCATCAGATTTCTC+AGG 0.488834 3_2:-53307866 None:intergenic
TGTGGTGGAAGAAGTGAAAG+AGG 0.494879 3_2:+53302340 Msa0411160:CDS
AACTGATGGAGGGAAAGTCT+TGG 0.495923 3_2:+53302037 Msa0411160:CDS
GTTTCTAAGACTGATTCAAA+TGG 0.497991 3_2:+53301960 Msa0411160:CDS
CAATGTAGCTGAAGTAAAAG+AGG 0.499311 3_2:+53302271 Msa0411160:CDS
AGATAAGAAAGTTGAGGGTG+TGG 0.501886 3_2:+53302112 Msa0411160:CDS
AAGAGGAGAAGAAAGATGAT+GGG 0.505907 3_2:+53302393 Msa0411160:CDS
TTCTTAGGTGCTCTCTTAGG+TGG 0.507331 3_2:-53308049 None:intergenic
AGAGACAGAGGAGAAGGAAG+AGG 0.509912 3_2:+53302775 Msa0411160:CDS
GGAGAAGAAAGATGATGGGG+TGG 0.510926 3_2:+53302397 Msa0411160:CDS
AAGAGGAGAAGAAAGATGAA+GGG 0.512021 3_2:+53302357 Msa0411160:CDS
AGGTCAAGAGTAATATATTG+AGG 0.513587 3_2:+53304954 Msa0411160:CDS
AGGGGCTGATGAAGTAAAAG+AGG 0.517274 3_2:+53302376 Msa0411160:CDS
GGGAAAGTCTTGGAGAGTAA+TGG 0.519047 3_2:+53302047 Msa0411160:CDS
TAAATCAAAAGAAGAAGATA+AGG 0.520812 3_2:+53302871 Msa0411160:CDS
TGAAGAAGATAAGAAAGTTG+AGG 0.521925 3_2:+53302106 Msa0411160:CDS
CTGATCATCTGTGGGACTTG+AGG 0.524444 3_2:-53308482 None:intergenic
GTCTGCAAGTACCACAGTTG+TGG 0.524700 3_2:-53305877 None:intergenic
GGTGGAAAAGAAAGATAATG+AGG 0.524990 3_2:+53302466 Msa0411160:CDS
TTCAGCTAACAAATTTGATG+TGG 0.525782 3_2:+53309523 Msa0411160:intron
CTAATCCACAATCAACAGTC+AGG 0.527682 3_2:-53309682 None:intergenic
CACAGTTGTGGTTGCATGAG+GGG 0.528551 3_2:-53305865 None:intergenic
TGAGGAGAAAACTGAAGTAG+AGG 0.528696 3_2:+53302715 Msa0411160:CDS
TGATGTGGTAAAAGTAAAAG+AGG 0.530375 3_2:+53302304 Msa0411160:CDS
TAAGAAAGATGAAGATGGGG+TGG 0.530937 3_2:+53302151 Msa0411160:CDS
AGCATTGAGGAGAAAGAAGA+GGG 0.531988 3_2:+53302686 Msa0411160:CDS
GAAGTAGAGGAGAAGGAAGA+AGG 0.536555 3_2:+53302728 Msa0411160:CDS
TGATAGTGTGAAAGAAGCAG+TGG 0.537441 3_2:+53302517 Msa0411160:CDS
TGGGGTGGGAGAAGTAAAAG+AGG 0.537965 3_2:+53302166 Msa0411160:CDS
CCTTCCCTCTCCTTCCAAAG+AGG 0.541109 3_2:-53304696 None:intergenic
AAGAAAGACTTGGAAACTGA+TGG 0.541964 3_2:+53302023 Msa0411160:CDS
TCCATACAATCCTCTTTGGA+AGG 0.542692 3_2:+53304686 Msa0411160:CDS
GAGGGTAGTAAGGCTGAGAA+AGG 0.543123 3_2:+53302896 Msa0411160:CDS
TGGCAGCCAACCCAACCAAA+AGG 0.543954 3_2:-53309864 None:intergenic
CAGAAAGGTGTCAACTTCAA+AGG 0.544125 3_2:-53309983 None:intergenic
AAACGAGGTACACCAAGGTC+TGG 0.545991 3_2:+53306050 Msa0411160:CDS
AACTGAAGCAGAGACGGAGG+AGG 0.546642 3_2:+53302814 Msa0411160:CDS
TGTTGTTGAGAAGAAAGACT+TGG 0.548033 3_2:+53302013 Msa0411160:CDS
GGAGAAAACTGAAGCAGAGA+CGG 0.548254 3_2:+53302808 Msa0411160:CDS
GAGACAGAGGAGAAGGAAGA+GGG 0.548993 3_2:+53302776 Msa0411160:CDS
TTAAGCCTGACTGTTGATTG+TGG 0.549788 3_2:+53309677 Msa0411160:three_prime_UTR
TGAAGAAGAGACAGAGGAGA+AGG 0.551387 3_2:+53302769 Msa0411160:CDS
ACCAAGTAGTTTCAGAATGT+CGG 0.552078 3_2:-53308757 None:intergenic
GAGGTACACCAAGGTCTGGT+GGG 0.555694 3_2:+53306054 Msa0411160:CDS
AGAGGAGAAGAAAGATGAAG+GGG 0.555957 3_2:+53302358 Msa0411160:CDS
GAAAGAAGAGGGTAATGATG+AGG 0.555999 3_2:+53302697 Msa0411160:CDS
GTGGAAAAGAAAGATAATGA+GGG 0.556797 3_2:+53302467 Msa0411160:CDS
TGGGGTGGAAGAAGTAAAAG+AGG 0.558470 3_2:+53302412 Msa0411160:CDS
AAATGAAGATTCTTCAGGAG+TGG 0.559104 3_2:+53307757 Msa0411160:CDS
TTCCAGAGGGAAGGTTAATG+AGG 0.559631 3_2:+53302931 Msa0411160:CDS
GGATAAGAAAGACGATGTGG+TGG 0.559683 3_2:+53302325 Msa0411160:CDS
AAAAGAAGAAGATAAGGCAG+AGG 0.559965 3_2:+53302877 Msa0411160:CDS
TCAAAGTCCAAAGAGAAAGC+TGG 0.560527 3_2:+53308199 Msa0411160:CDS
ACTTTCATCAATATCATCAT+CGG 0.563049 3_2:-53308095 None:intergenic
TGACATCCAAGAAATGGAAG+AGG 0.563136 3_2:+53302556 Msa0411160:CDS
GTACTAGCCCCACCAGACCT+TGG 0.566752 3_2:-53306062 None:intergenic
CGAGGTACACCAAGGTCTGG+TGG 0.566882 3_2:+53306053 Msa0411160:CDS
TTCGATTGAACTGAGTGTGG+TGG 0.568671 3_2:+53301872 Msa0411160:five_prime_UTR
TTTCAGAATGTCGGTAAATG+TGG 0.569605 3_2:-53308748 None:intergenic
TGGAAAAGAAAGATAATGAG+GGG 0.570434 3_2:+53302468 Msa0411160:CDS
AGATGCAGAGGGTAGCATTG+AGG 0.571029 3_2:+53302673 Msa0411160:CDS
TGAGTCCGAGGAAGATGAAG+AGG 0.571197 3_2:+53309619 Msa0411160:CDS
TCTTCCCTTTCAGATTTCTG+TGG 0.571570 3_2:-53307890 None:intergenic
ACCACAGTTGTGGTTGCATG+AGG 0.573342 3_2:-53305867 None:intergenic
AAGAAAGATGAAGATGGGGT+GGG 0.575639 3_2:+53302152 Msa0411160:CDS
GAAAACTGAAGCAGAGACGG+AGG 0.576529 3_2:+53302811 Msa0411160:CDS
TAGTGTGAAAGAAGCAGTGG+AGG 0.578257 3_2:+53302520 Msa0411160:CDS
GGAAGAAGAAAAGTGAGCAA+GGG 0.579111 3_2:+53308134 Msa0411160:CDS
AGGAAGAAGAAAAGTGAGCA+AGG 0.579169 3_2:+53308133 Msa0411160:CDS
GTCCGAGGAAGATGAAGAGG+AGG 0.580746 3_2:+53309622 Msa0411160:CDS
TAGCATTGAGGAGAAAGAAG+AGG 0.581637 3_2:+53302685 Msa0411160:CDS
TCTAAGACTGATTCAAATGG+AGG 0.582420 3_2:+53301963 Msa0411160:CDS
ATGCCGAGAAAGATGAAGAC+CGG 0.582887 3_2:+53309645 Msa0411160:CDS
ACAATCCTCTTTGGAAGGAG+AGG 0.583278 3_2:+53304691 Msa0411160:CDS
AAGCAAGATCAGTATGGGTG+AGG 0.583972 3_2:+53301920 Msa0411160:exon
CAATCCTCTTTGGAAGGAGA+GGG 0.585119 3_2:+53304692 Msa0411160:CDS
AAAGAGGATAAGAAAGCCGA+TGG 0.586492 3_2:+53302182 Msa0411160:CDS
GGGTGTGGAAAAGGTACAAG+AGG 0.588552 3_2:+53302127 Msa0411160:CDS
TATCTAAGCAAGATCAGTAT+GGG 0.588642 3_2:+53301915 Msa0411160:exon
TGTGGTACTTGCAGACAAAG+AGG 0.589329 3_2:+53305884 Msa0411160:CDS
AACGCCACAGAAATCTGAAA+GGG 0.590074 3_2:+53307886 Msa0411160:CDS
GGATAAGAAAGATGAAGATG+GGG 0.592297 3_2:+53302148 Msa0411160:CDS
TCACGCAACTGATCATCTGT+GGG 0.592688 3_2:-53308490 None:intergenic
AGAGGAGAAGAAAGATGATG+GGG 0.593216 3_2:+53302394 Msa0411160:CDS
AATTATCAATAAGCCCAGAA+AGG 0.593248 3_2:-53309998 None:intergenic
CCACAGTTGTGGTTGCATGA+GGG 0.596193 3_2:-53305866 None:intergenic
GAAGAAGAAAAGTGAGCAAG+GGG 0.597718 3_2:+53308135 Msa0411160:CDS
GCTCATGATTCAGAAAGAGC+TGG 0.598185 3_2:+53309574 Msa0411160:CDS
TAAGCAGAAAAGGTTACTAA+GGG 0.598561 3_2:+53308436 Msa0411160:intron
TGAAGAAGCAGATGAGTCCG+AGG 0.600697 3_2:+53309607 Msa0411160:CDS
AAACGCCACAGAAATCTGAA+AGG 0.602760 3_2:+53307885 Msa0411160:CDS
TGACACAGAAGATGAATCAG+AGG 0.610205 3_2:+53307796 Msa0411160:CDS
TGATGGTGCAGATGAAGTAA+AGG 0.610805 3_2:+53302445 Msa0411160:CDS
GCGAGATTTATTTGTGACCG+TGG 0.612030 3_2:-53308020 None:intergenic
AAAGAAGAAGATAAGGCAGA+GGG 0.612875 3_2:+53302878 Msa0411160:CDS
AAGACTTGGAAACTGATGGA+GGG 0.613149 3_2:+53302027 Msa0411160:CDS
AGAGGATAAGAAAGATGATG+TGG 0.613532 3_2:+53302289 Msa0411160:CDS
GAAATCTGAAGAAGAGACAG+AGG 0.614258 3_2:+53302763 Msa0411160:CDS
ATCACGCAACTGATCATCTG+TGG 0.614796 3_2:-53308491 None:intergenic
TATGGGTGAGGAAGAAGTAG+TGG 0.616556 3_2:+53301932 Msa0411160:exon
TGGTGCAGATGAAGTAAAGG+TGG 0.616571 3_2:+53302448 Msa0411160:CDS
TGGCATTTAAGTTATCCAGA+AGG 0.625830 3_2:+53304638 Msa0411160:CDS
CAAGGAATTACACATTGCAA+AGG 0.625952 3_2:+53303078 Msa0411160:CDS
GTACACAATAAACTACATGC+TGG 0.627433 3_2:-53309884 None:intergenic
TCAGGCTTAAGGTTTAAGAC+CGG 0.629074 3_2:-53309664 None:intergenic
AGATATTATTGCTAAGCTGA+CGG 0.633751 3_2:+53305830 Msa0411160:CDS
AAGAGGATAAGAAAGCCGAT+GGG 0.641052 3_2:+53302183 Msa0411160:CDS
GGTGGGGCTAGTACTTCAAG+AGG 0.642776 3_2:+53306071 Msa0411160:CDS
AATCGATAAAGATGCAACCA+AGG 0.642945 3_2:+53303060 Msa0411160:CDS
GGAGAGTAATGGAGTCAAAG+AGG 0.646300 3_2:+53302058 Msa0411160:CDS
TCTGCAAAGAAAGAGTCCGC+CGG 0.646881 3_2:+53307977 Msa0411160:CDS
ATCAGTCAAGCAAGAAGCGT+AGG 0.648173 3_2:+53306018 Msa0411160:intron
AAAGACTTGGAAACTGATGG+AGG 0.652291 3_2:+53302026 Msa0411160:CDS
TACTTCAAGAGGTTCTGGAA+AGG 0.652399 3_2:+53306082 Msa0411160:CDS
AGTCAAGCAAGAAGCGTAGG+CGG 0.654264 3_2:+53306021 Msa0411160:intron
CCCTCATGCAACCACAACTG+TGG 0.656212 3_2:+53305866 Msa0411160:CDS
AAGAAGAAAAGTGAGCAAGG+GGG 0.662817 3_2:+53308136 Msa0411160:CDS
GACACAGAAGATGAATCAGA+GGG 0.663780 3_2:+53307797 Msa0411160:CDS
AGAGGATAAGAAAGCCGATG+GGG 0.663923 3_2:+53302184 Msa0411160:CDS
GAAAATGGATGTTGATGCTG+AGG 0.663965 3_2:+53302610 Msa0411160:CDS
CCTTTAAAAGATATACCCAA+TGG 0.668040 3_2:+53303208 Msa0411160:CDS
GCGTTCCGGTGAAATCATTG+GGG 0.668207 3_2:+53301988 Msa0411160:CDS
GGAAAAGAAAGATAATGAGG+GGG 0.671001 3_2:+53302469 Msa0411160:CDS
TGATATTGATGAAAGTCCAA+AGG 0.671560 3_2:+53308102 Msa0411160:CDS
CCTCTTTGGAAGGAGAGGGA+AGG 0.676579 3_2:+53304696 Msa0411160:CDS
AGAGGATAAGAAAGACGATG+TGG 0.678309 3_2:+53302322 Msa0411160:CDS
AGGTACACCAAGGTCTGGTG+GGG 0.685613 3_2:+53306055 Msa0411160:CDS
TTGTTCGATTGAACTGAGTG+TGG 0.687290 3_2:+53301869 Msa0411160:five_prime_UTR
CGTTCCGGTGAAATCATTGG+GGG 0.697927 3_2:+53301989 Msa0411160:CDS
GAGGATAAGAAAGCCGATGG+GGG 0.702206 3_2:+53302185 Msa0411160:CDS
CTGTAAAACGAGGTACACCA+AGG 0.706122 3_2:+53306045 Msa0411160:CDS
CGTAGGCGGACTGTAAAACG+AGG 0.731960 3_2:+53306035 Msa0411160:CDS
AAGCAAAACTGAGAAAACCA+CGG 0.741194 3_2:+53308003 Msa0411160:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTCCAAAAAAAAAAAAT+GGG - chr3_2:53301190-53301209 None:intergenic 10.0%
!! TAAATTCCAAAAAAAAAAAA+TGG - chr3_2:53301191-53301210 None:intergenic 10.0%
!!! TTTGTTTTATTTAGAATTTT+GGG + chr3_2:53301212-53301231 Msa0411160:intron 10.0%
!! ATAATAAAAATGCATAATTA+AGG - chr3_2:53303139-53303158 None:intergenic 10.0%
!!! TTTTGTTTTTTGTATTATTA+TGG + chr3_2:53304784-53304803 Msa0411160:intron 10.0%
!! CTGTAAAAAAAAAATATATT+AGG - chr3_2:53305200-53305219 None:intergenic 10.0%
!!! CTAATATATTTTTTTTTTAC+AGG + chr3_2:53305198-53305217 Msa0411160:intron 10.0%
!!! TGATATTTTAAAAATATTCA+CGG - chr3_2:53305508-53305527 None:intergenic 10.0%
!! ATATTATTTAAATTAAATGC+TGG - chr3_2:53307416-53307435 None:intergenic 10.0%
!! ATAAAATAAAATGTAATACA+AGG - chr3_2:53307629-53307648 None:intergenic 10.0%
!!! ACATTTTATTTTATTCAAAA+TGG + chr3_2:53307635-53307654 Msa0411160:intron 10.0%
!!! CATATTTATATTTTAACTAA+CGG - chr3_2:53308379-53308398 None:intergenic 10.0%
!!! AAAATCCCATTTTTTTTTTT+TGG + chr3_2:53301182-53301201 Msa0411160:intron 15.0%
!!! CTTTGTTTTATTTAGAATTT+TGG + chr3_2:53301211-53301230 Msa0411160:intron 15.0%
!!! AAATATTATGTTTTGAACTT+AGG + chr3_2:53301269-53301288 Msa0411160:intron 15.0%
!! AAATTAACATTAGTATCAAA+AGG + chr3_2:53303723-53303742 Msa0411160:intron 15.0%
!! TATTTCAAGATAATTTCTAT+TGG + chr3_2:53304302-53304321 Msa0411160:intron 15.0%
!!! TGGTATTCTAATATTTTAAT+CGG - chr3_2:53304401-53304420 None:intergenic 15.0%
!! ATTAAAATATTAGAATACCA+CGG + chr3_2:53304401-53304420 Msa0411160:intron 15.0%
!! AAAACAAAATCAAATCAATA+CGG - chr3_2:53304773-53304792 None:intergenic 15.0%
!!! TTTTATTTACCTTTGATATT+TGG + chr3_2:53304861-53304880 Msa0411160:intron 15.0%
!! TTTATTTACCTTTGATATTT+GGG + chr3_2:53304862-53304881 Msa0411160:intron 15.0%
!!! TATTATAGTTTGTAGTTTTT+GGG - chr3_2:53305021-53305040 None:intergenic 15.0%
!! AAAAAAAAAAGACAAAAAGT+CGG - chr3_2:53305137-53305156 None:intergenic 15.0%
!! TACTATTATATAAAGACAAA+TGG + chr3_2:53305453-53305472 Msa0411160:intron 15.0%
!! TACATAATTAAAGATATCAA+AGG + chr3_2:53305549-53305568 Msa0411160:intron 15.0%
!!! AAATACTAATTTTTATTTGG+TGG - chr3_2:53306865-53306884 None:intergenic 15.0%
!! ACCAAATAAAAATTAGTATT+TGG + chr3_2:53306864-53306883 Msa0411160:intron 15.0%
!!! TTATTTTTAGGAATAAAAAG+AGG - chr3_2:53307158-53307177 None:intergenic 15.0%
!! ATTAAAAAAATTAGGGTAAA+TGG - chr3_2:53307550-53307569 None:intergenic 15.0%
!!! TTTACCCTAATTTTTTTAAT+CGG + chr3_2:53307550-53307569 Msa0411160:intron 15.0%
!!! TTGATGTATAAAGTATTTTT+AGG + chr3_2:53308603-53308622 Msa0411160:intron 15.0%
!! ACTACAAATAAAAAAATAGA+GGG - chr3_2:53309084-53309103 None:intergenic 15.0%
!!! GTGATTTTAGATAATTATAA+AGG + chr3_2:53309176-53309195 Msa0411160:intron 15.0%
!!! ATTGATAATTTCTTATTGTT+AGG + chr3_2:53310011-53310030 Msa0411160:three_prime_UTR 15.0%
!!! TTTTTCACAAAGAAATGAAA+GGG - chr3_2:53301087-53301106 None:intergenic 20.0%
!!! TTTTAAAGTCAATTGTTTTG+TGG + chr3_2:53301124-53301143 Msa0411160:intron 20.0%
!!! TTTAAAGTCAATTGTTTTGT+GGG + chr3_2:53301125-53301144 Msa0411160:intron 20.0%
!!! ACTTGTATGTTTTTTAGTTT+AGG + chr3_2:53301334-53301353 Msa0411160:intron 20.0%
!!! CTTGTATGTTTTTTAGTTTA+GGG + chr3_2:53301335-53301354 Msa0411160:intron 20.0%
!! TAAATGAGTATTTAATGTTG+TGG + chr3_2:53301406-53301425 Msa0411160:intron 20.0%
!!! TAATGTTGTGGTTTTTTTTT+TGG + chr3_2:53301418-53301437 Msa0411160:intron 20.0%
!!! TATAAATGTTTTTAGACTTC+TGG + chr3_2:53301755-53301774 Msa0411160:intron 20.0%
!!! TAAAAGTGCAAAGAAAATAA+TGG - chr3_2:53301812-53301831 None:intergenic 20.0%
!!! ATTTTCTTTGCACTTTTATA+TGG + chr3_2:53301814-53301833 Msa0411160:intron 20.0%
!! TAAATCAAAAGAAGAAGATA+AGG + chr3_2:53302871-53302890 Msa0411160:CDS 20.0%
!! TAAAAAAAACAATCAAAGAG+AGG - chr3_2:53303241-53303260 None:intergenic 20.0%
!!! ATTGTTTTTTTTATCTGTGA+TGG + chr3_2:53303248-53303267 Msa0411160:intron 20.0%
!! GCATATAATGAAAAAGAAAA+GGG - chr3_2:53303614-53303633 None:intergenic 20.0%
!! TGCATATAATGAAAAAGAAA+AGG - chr3_2:53303615-53303634 None:intergenic 20.0%
!!! GTATTATAGTTTGTAGTTTT+TGG - chr3_2:53305022-53305041 None:intergenic 20.0%
!!! GCAACATATTCATATTTTTA+TGG + chr3_2:53305986-53306005 Msa0411160:intron 20.0%
!!! CAAAACCAATTTTTAAAAAC+CGG + chr3_2:53306617-53306636 Msa0411160:intron 20.0%
!!! AAAACCAATTTTTAAAAACC+GGG + chr3_2:53306618-53306637 Msa0411160:intron 20.0%
!!! GCCAAATACTAATTTTTATT+TGG - chr3_2:53306868-53306887 None:intergenic 20.0%
!! AAAGATTGTTCAATAAAAGT+CGG - chr3_2:53306969-53306988 None:intergenic 20.0%
!!! GGTTATGTTTGTTTATTTTT+AGG - chr3_2:53307170-53307189 None:intergenic 20.0%
!!! TGCATGCAAATAATATTTTA+TGG + chr3_2:53307389-53307408 Msa0411160:intron 20.0%
!!! GCATGCAAATAATATTTTAT+GGG + chr3_2:53307390-53307409 Msa0411160:intron 20.0%
!!! TTTGCCGATTAAAAAAATTA+GGG - chr3_2:53307557-53307576 None:intergenic 20.0%
!!! TTTTGCCGATTAAAAAAATT+AGG - chr3_2:53307558-53307577 None:intergenic 20.0%
!!! TCATTAGTATAAGTTGATAT+TGG + chr3_2:53307601-53307620 Msa0411160:intron 20.0%
!! TAAAAGAAATAATGACAACA+GGG - chr3_2:53308243-53308262 None:intergenic 20.0%
!!! TATATTTTAACTAACGGAAA+AGG - chr3_2:53308373-53308392 None:intergenic 20.0%
!!! GAGAAAAAAACTTTCAATTT+TGG - chr3_2:53308719-53308738 None:intergenic 20.0%
!!! CTCATAATTTTAACTGAAAA+AGG - chr3_2:53308834-53308853 None:intergenic 20.0%
!!! TAAAAGAATTTTGCTCTTAA+AGG - chr3_2:53308874-53308893 None:intergenic 20.0%
!! TAAATATGCTAGATTGTTAA+GGG - chr3_2:53308977-53308996 None:intergenic 20.0%
!!! AATCTAGCATATTTAGTTTT+AGG + chr3_2:53308982-53309001 Msa0411160:intron 20.0%
!! AAATTCAAGATTAAGTATCA+AGG - chr3_2:53309057-53309076 None:intergenic 20.0%
!! CTACAAATAAAAAAATAGAG+GGG - chr3_2:53309083-53309102 None:intergenic 20.0%
!! GACTACAAATAAAAAAATAG+AGG - chr3_2:53309085-53309104 None:intergenic 20.0%
!! ATAGATCAAAGAAAATTGAT+AGG - chr3_2:53309107-53309126 None:intergenic 20.0%
!!! TAAAATTTTCAAGAGATTTG+TGG - chr3_2:53309210-53309229 None:intergenic 20.0%
!! ATTATGTAGGATTTATGTTA+GGG + chr3_2:53309243-53309262 Msa0411160:intron 20.0%
!!! ATTAAAACTTTTTTTGTCAC+AGG - chr3_2:53309461-53309480 None:intergenic 20.0%
!!! TGTGACAAAAAAAGTTTTAA+TGG + chr3_2:53309460-53309479 Msa0411160:intron 20.0%
!!! AAGTTTTAATGGATAAGTTT+TGG + chr3_2:53309471-53309490 Msa0411160:intron 20.0%
!!! AGTTTTAATGGATAAGTTTT+GGG + chr3_2:53309472-53309491 Msa0411160:intron 20.0%
!! TAGAAAGAAAGAAAGAAAAA+AGG - chr3_2:53309929-53309948 None:intergenic 20.0%
!!! CTTTTTCACAAAGAAATGAA+AGG - chr3_2:53301088-53301107 None:intergenic 25.0%
!!! TTTAGGGTTTGATCTTTTTA+AGG + chr3_2:53301351-53301370 Msa0411160:intron 25.0%
!! TTAGGGTTTGATCTTTTTAA+GGG + chr3_2:53301352-53301371 Msa0411160:intron 25.0%
! CTTAATTATTCATTCATCTC+AGG + chr3_2:53301444-53301463 Msa0411160:intron 25.0%
!! ATTAGCGTCACTTTAATAAA+TGG + chr3_2:53301603-53301622 Msa0411160:intron 25.0%
! AAAGAGGATAAGAAAAATGA+TGG + chr3_2:53302218-53302237 Msa0411160:CDS 25.0%
! TACAGAAGATAAAGAAGAAA+AGG + chr3_2:53302643-53302662 Msa0411160:CDS 25.0%
! TTACGAGTATATACATAGAA+CGG - chr3_2:53303284-53303303 None:intergenic 25.0%
! TTGACTATCAAACAATATAC+CGG - chr3_2:53303403-53303422 None:intergenic 25.0%
! GCACGGTTATATATATTATA+TGG - chr3_2:53303482-53303501 None:intergenic 25.0%
! CAATAAATTAGTAGTAGTAG+TGG + chr3_2:53304254-53304273 Msa0411160:intron 25.0%
!! TTCCTTTTACTCATATGTTT+AGG + chr3_2:53304489-53304508 Msa0411160:intron 25.0%
!!! CTTTCATTTTTCTTCTTTAG+TGG + chr3_2:53304618-53304637 Msa0411160:intron 25.0%
!! AGTAATATATTGAGGTTTTC+TGG + chr3_2:53304962-53304981 Msa0411160:CDS 25.0%
!!! TTTTTTTTTTGAGTCCTTGT+CGG + chr3_2:53305158-53305177 Msa0411160:intron 25.0%
! TATTAGGATTTAACAACCTT+TGG - chr3_2:53305184-53305203 None:intergenic 25.0%
! GTGTAATAAAGAGAAGTTAT+TGG + chr3_2:53305258-53305277 Msa0411160:intron 25.0%
! AAATTAGCATAACATCATGA+AGG - chr3_2:53305937-53305956 None:intergenic 25.0%
! ATTAATAACCTGGAATTCAT+GGG - chr3_2:53306223-53306242 None:intergenic 25.0%
! AACAAGTTTCATTAATAACC+TGG - chr3_2:53306233-53306252 None:intergenic 25.0%
! ATAGTGAAAAGGTTATAAGT+TGG - chr3_2:53306259-53306278 None:intergenic 25.0%
! TTCATCAACTAATAGTGAAA+AGG - chr3_2:53306270-53306289 None:intergenic 25.0%
!!! ACTATTAGTTGATGAATACT+AGG + chr3_2:53306274-53306293 Msa0411160:intron 25.0%
!!! GAAAAAAAGAGGGTATTTTT+GGG - chr3_2:53306492-53306511 None:intergenic 25.0%
! TACAAAAAACGAAAAAACGA+CGG - chr3_2:53306522-53306541 None:intergenic 25.0%
! TACTCTTAAATTTCTATGCT+TGG - chr3_2:53306942-53306961 None:intergenic 25.0%
!! TTTTATTGAACAATCTTTGC+AGG + chr3_2:53306971-53306990 Msa0411160:intron 25.0%
!!! TTTTAGGAATAAAAAGAGGA+AGG - chr3_2:53307154-53307173 None:intergenic 25.0%
! AAAATGACTATTGTGGAATA+TGG - chr3_2:53307249-53307268 None:intergenic 25.0%
!!! TATTCCACAATAGTCATTTT+TGG + chr3_2:53307249-53307268 Msa0411160:intron 25.0%
!!! ATTCCACAATAGTCATTTTT+GGG + chr3_2:53307250-53307269 Msa0411160:intron 25.0%
!!! ATTAGTGAGACTTAGTTTTT+TGG + chr3_2:53307466-53307485 Msa0411160:intron 25.0%
!!! TCTTCTTATTTTTGAACTTG+TGG + chr3_2:53307708-53307727 Msa0411160:intron 25.0%
! AAGAAAAATGAAGATTCTTC+AGG + chr3_2:53307752-53307771 Msa0411160:CDS 25.0%
! AGAGAAAAATGAAGAAAATG+AGG + chr3_2:53307823-53307842 Msa0411160:CDS 25.0%
! AATCTGAAGATGTGAAAAAA+AGG + chr3_2:53307933-53307952 Msa0411160:CDS 25.0%
!! TTGGTATTTGATGATTTCTT+AGG - chr3_2:53308067-53308086 None:intergenic 25.0%
! ACTTTCATCAATATCATCAT+CGG - chr3_2:53308098-53308117 None:intergenic 25.0%
! AAAAGAAATAATGACAACAG+GGG - chr3_2:53308242-53308261 None:intergenic 25.0%
! GTAAAAGAAATAATGACAAC+AGG - chr3_2:53308244-53308263 None:intergenic 25.0%
!! TAAAGAAGTTGACTTCAATA+CGG + chr3_2:53308531-53308550 Msa0411160:CDS 25.0%
!!! AAAGTTTTTTTCTCTTTTGC+AGG + chr3_2:53308725-53308744 Msa0411160:intron 25.0%
! CTAAATATGCTAGATTGTTA+AGG - chr3_2:53308978-53308997 None:intergenic 25.0%
! ATATCAGTATTATGCAATCT+TGG + chr3_2:53309030-53309049 Msa0411160:intron 25.0%
!! TTTTGTTGAGTGAAAAAATG+TGG - chr3_2:53309141-53309160 None:intergenic 25.0%
! TAAAACTCAGAAGATTATGT+AGG + chr3_2:53309230-53309249 Msa0411160:intron 25.0%
! GATTATGTAGGATTTATGTT+AGG + chr3_2:53309242-53309261 Msa0411160:intron 25.0%
! ATTTATGTTAGGGTTTAAAG+AGG + chr3_2:53309253-53309272 Msa0411160:intron 25.0%
! ACATAACATAATCATGTTTG+AGG - chr3_2:53309430-53309449 None:intergenic 25.0%
! TCAAACATGATTATGTTATG+TGG + chr3_2:53309429-53309448 Msa0411160:intron 25.0%
!!! CAATTTATTTTGTGTAGAAG+TGG + chr3_2:53309761-53309780 Msa0411160:three_prime_UTR 25.0%
! CTACTGTTGAGAATTTTGTT+TGG + chr3_2:53301311-53301330 Msa0411160:intron 30.0%
CTCATTTAGCATTAACTTCA+GGG - chr3_2:53301394-53301413 None:intergenic 30.0%
ACTCATTTAGCATTAACTTC+AGG - chr3_2:53301395-53301414 None:intergenic 30.0%
! GCTAATGAACATTTTACAAC+CGG - chr3_2:53301589-53301608 None:intergenic 30.0%
AAATACCCTTCTGTTGTAAA+TGG + chr3_2:53301721-53301740 Msa0411160:intron 30.0%
!!! TGTTTTTAGACTTCTGGTTA+TGG + chr3_2:53301761-53301780 Msa0411160:intron 30.0%
TATCTAAGCAAGATCAGTAT+GGG + chr3_2:53301915-53301934 Msa0411160:exon 30.0%
!! GTTTCTAAGACTGATTCAAA+TGG + chr3_2:53301960-53301979 Msa0411160:CDS 30.0%
TGAAGAAGATAAGAAAGTTG+AGG + chr3_2:53302106-53302125 Msa0411160:CDS 30.0%
GAAGAAGATAAGAAAGTTGA+GGG + chr3_2:53302107-53302126 Msa0411160:CDS 30.0%
AGGATAAGAAAGATGAAGAT+GGG + chr3_2:53302147-53302166 Msa0411160:CDS 30.0%
TGATGTGGTAAAAGTAAAAG+AGG + chr3_2:53302304-53302323 Msa0411160:CDS 30.0%
GTGGAAAAGAAAGATAATGA+GGG + chr3_2:53302467-53302486 Msa0411160:CDS 30.0%
TGGAAAAGAAAGATAATGAG+GGG + chr3_2:53302468-53302487 Msa0411160:CDS 30.0%
GGAAGAAGTAAAAGATGATA+TGG + chr3_2:53302490-53302509 Msa0411160:CDS 30.0%
! ATTTTCTCATTCTCAGATTC+AGG - chr3_2:53302596-53302615 None:intergenic 30.0%
TGAATCTGAGAATGAGAAAA+TGG + chr3_2:53302595-53302614 Msa0411160:CDS 30.0%
GAAAGTGAAAGACAAAAAGA+AGG + chr3_2:53302955-53302974 Msa0411160:CDS 30.0%
! CCATTGGGTATATCTTTTAA+AGG - chr3_2:53303211-53303230 None:intergenic 30.0%
! CCTTTAAAAGATATACCCAA+TGG + chr3_2:53303208-53303227 Msa0411160:CDS 30.0%
AAAAGATATACCCAATGGTA+TGG + chr3_2:53303213-53303232 Msa0411160:intron 30.0%
!! GAAAGTGTTGTGAACAAATA+AGG - chr3_2:53304086-53304105 None:intergenic 30.0%
CACCTAAACATATGAGTAAA+AGG - chr3_2:53304494-53304513 None:intergenic 30.0%
! TGTTTACATTTGTTACACTG+TGG + chr3_2:53304554-53304573 Msa0411160:intron 30.0%
! GAATCAACTTATTAGCTCTT+CGG - chr3_2:53304599-53304618 None:intergenic 30.0%
ACAAAATCAAATCAATACGG+TGG - chr3_2:53304770-53304789 None:intergenic 30.0%
! ATCAGAATTTTGTATAGTGC+AGG + chr3_2:53304815-53304834 Msa0411160:intron 30.0%
!!! ATGTCAAGCTTTTTAAGTGT+AGG - chr3_2:53304841-53304860 None:intergenic 30.0%
! TACCTTTGATATTTGGGTTA+TGG + chr3_2:53304868-53304887 Msa0411160:intron 30.0%
TTCCATAACCCAAATATCAA+AGG - chr3_2:53304873-53304892 None:intergenic 30.0%
! ATTTGGGTTATGGAATTTAC+AGG + chr3_2:53304878-53304897 Msa0411160:intron 30.0%
AGGTCAAGAGTAATATATTG+AGG + chr3_2:53304954-53304973 Msa0411160:CDS 30.0%
ACAAAGGATTTAACAACCTT+AGG - chr3_2:53305101-53305120 None:intergenic 30.0%
CGGTAGAAAAATTACTACAA+AGG - chr3_2:53305117-53305136 None:intergenic 30.0%
AAGTAAAAGAAAAGCTAGAC+AGG + chr3_2:53305236-53305255 Msa0411160:intron 30.0%
AATTACCAAGTCAACAACAA+AGG + chr3_2:53305306-53305325 Msa0411160:intron 30.0%
!!! CAAAGTCACTTATTTTGAAC+CGG - chr3_2:53305387-53305406 None:intergenic 30.0%
! CTTTGTTATATGTATGCACA+GGG + chr3_2:53305665-53305684 Msa0411160:intron 30.0%
! TTTGTTATATGTATGCACAG+GGG + chr3_2:53305666-53305685 Msa0411160:intron 30.0%
!! CATATATGTTCTAGCCTTAA+AGG + chr3_2:53305742-53305761 Msa0411160:intron 30.0%
TTAAATGATACCAGTCAACA+GGG - chr3_2:53305771-53305790 None:intergenic 30.0%
AGATATTATTGCTAAGCTGA+CGG + chr3_2:53305830-53305849 Msa0411160:CDS 30.0%
ACATCATGAAGGAAAAAAGT+TGG - chr3_2:53305926-53305945 None:intergenic 30.0%
AGCTTCTAATAACACATTTG+TGG - chr3_2:53306130-53306149 None:intergenic 30.0%
CATTAATAACCTGGAATTCA+TGG - chr3_2:53306224-53306243 None:intergenic 30.0%
!!! GGAAAAAAAGAGGGTATTTT+TGG - chr3_2:53306493-53306512 None:intergenic 30.0%
ACAAAAAACGAAAAAACGAC+GGG - chr3_2:53306521-53306540 None:intergenic 30.0%
ATAACTACCAGTTCAATCTA+CGG - chr3_2:53306644-53306663 None:intergenic 30.0%
! TTTGTGCTGTTACATATGTA+TGG + chr3_2:53306699-53306718 Msa0411160:intron 30.0%
AATAAAAAGAGGAAGGAAAG+GGG - chr3_2:53307147-53307166 None:intergenic 30.0%
GAATAAAAAGAGGAAGGAAA+GGG - chr3_2:53307148-53307167 None:intergenic 30.0%
!!! ATAAGCTTTGGAGCTTTTAT+AGG - chr3_2:53307349-53307368 None:intergenic 30.0%
TATGTAGTCGATGAAATGTA+AGG + chr3_2:53307433-53307452 Msa0411160:intron 30.0%
!! TTTTGGAGATGTTGAATTGA+AGG + chr3_2:53307483-53307502 Msa0411160:intron 30.0%
CTAATGATCAGATTACAAGT+TGG - chr3_2:53307588-53307607 None:intergenic 30.0%
! TTCTCAGGAATATCATTTTC+AGG - chr3_2:53307854-53307873 None:intergenic 30.0%
! TTTCTTTGCAGATGATGTTT+TGG - chr3_2:53307969-53307988 None:intergenic 30.0%
TGATATTGATGAAAGTCCAA+AGG + chr3_2:53308102-53308121 Msa0411160:CDS 30.0%
!!! AAAGTCCAAAGGTATTTTCT+AGG + chr3_2:53308113-53308132 Msa0411160:CDS 30.0%
TTCTTCCTAGAAAATACCTT+TGG - chr3_2:53308121-53308140 None:intergenic 30.0%
TAAGCAGAAAAGGTTACTAA+GGG + chr3_2:53308436-53308455 Msa0411160:intron 30.0%
ACTTCAATACGGTAATATGT+TGG + chr3_2:53308542-53308561 Msa0411160:intron 30.0%
AGGTATAACTACTGATATTG+TGG - chr3_2:53308814-53308833 None:intergenic 30.0%
TCACAAGAAAATGCAAAAAC+TGG - chr3_2:53308909-53308928 None:intergenic 30.0%
TCATTATCCTTTAACCTGAA+CGG + chr3_2:53308930-53308949 Msa0411160:intron 30.0%
CACTCAACAAAAGTTTATGA+TGG + chr3_2:53309149-53309168 Msa0411160:intron 30.0%
AACATGATTATGTTATGTGG+AGG + chr3_2:53309432-53309451 Msa0411160:intron 30.0%
ACATGATTATGTTATGTGGA+GGG + chr3_2:53309433-53309452 Msa0411160:intron 30.0%
TTCAGCTAACAAATTTGATG+TGG + chr3_2:53309523-53309542 Msa0411160:intron 30.0%
AATTATCAATAAGCCCAGAA+AGG - chr3_2:53310001-53310020 None:intergenic 30.0%
AAGCTTACAGATTCAGGATT+TGG - chr3_2:53301044-53301063 None:intergenic 35.0%
AGTAGAAAGCTTACAGATTC+AGG - chr3_2:53301050-53301069 None:intergenic 35.0%
! TTGTGGGTCGTGTAAATTTT+AGG + chr3_2:53301141-53301160 Msa0411160:intron 35.0%
! TGTGGGTCGTGTAAATTTTA+GGG + chr3_2:53301142-53301161 Msa0411160:intron 35.0%
! TTGAACTTAGGTTTTTGCTG+TGG + chr3_2:53301281-53301300 Msa0411160:intron 35.0%
GTTGTTGCAAATTACACTTG+AGG + chr3_2:53301497-53301516 Msa0411160:intron 35.0%
AGTTTAACATTGTAACCTCG+AGG + chr3_2:53301538-53301557 Msa0411160:intron 35.0%
CTATCTAAGCAAGATCAGTA+TGG + chr3_2:53301914-53301933 Msa0411160:exon 35.0%
! TCTAAGACTGATTCAAATGG+AGG + chr3_2:53301963-53301982 Msa0411160:CDS 35.0%
TGTTGTTGAGAAGAAAGACT+TGG + chr3_2:53302013-53302032 Msa0411160:CDS 35.0%
AAGAAAGACTTGGAAACTGA+TGG + chr3_2:53302023-53302042 Msa0411160:CDS 35.0%
GAGGATAAGAAAGATGAAGA+TGG + chr3_2:53302146-53302165 Msa0411160:CDS 35.0%
GGATAAGAAAGATGAAGATG+GGG + chr3_2:53302148-53302167 Msa0411160:CDS 35.0%
! GGATAAGAAAAATGATGGAG+TGG + chr3_2:53302223-53302242 Msa0411160:CDS 35.0%
CAATGTAGCTGAAGTAAAAG+AGG + chr3_2:53302271-53302290 Msa0411160:CDS 35.0%
AGAGGATAAGAAAGATGATG+TGG + chr3_2:53302289-53302308 Msa0411160:CDS 35.0%
AAAGAGGAGAAGAAAGATGA+AGG + chr3_2:53302356-53302375 Msa0411160:CDS 35.0%
AAGAGGAGAAGAAAGATGAA+GGG + chr3_2:53302357-53302376 Msa0411160:CDS 35.0%
AAAGAGGAGAAGAAAGATGA+TGG + chr3_2:53302356-53302375 Msa0411160:CDS 35.0%
AAGAGGAGAAGAAAGATGAT+GGG + chr3_2:53302393-53302412 Msa0411160:CDS 35.0%
GGAAGAAGTAAAAGAGGATA+AGG + chr3_2:53302418-53302437 Msa0411160:CDS 35.0%
AAAGAGGATAAGGAAGTTGA+TGG + chr3_2:53302428-53302447 Msa0411160:CDS 35.0%
GGTGGAAAAGAAAGATAATG+AGG + chr3_2:53302466-53302485 Msa0411160:CDS 35.0%
GGAAAAGAAAGATAATGAGG+GGG + chr3_2:53302469-53302488 Msa0411160:CDS 35.0%
! TGATGATGACATCCAAGAAA+TGG + chr3_2:53302550-53302569 Msa0411160:CDS 35.0%
AAAGGAAAAAGAAGATGCAG+AGG + chr3_2:53302661-53302680 Msa0411160:CDS 35.0%
AAGGAAAAAGAAGATGCAGA+GGG + chr3_2:53302662-53302681 Msa0411160:CDS 35.0%
AAAAGAAGAAGATAAGGCAG+AGG + chr3_2:53302877-53302896 Msa0411160:CDS 35.0%
AAAGAAGAAGATAAGGCAGA+GGG + chr3_2:53302878-53302897 Msa0411160:CDS 35.0%
AAGGAAATCAGTTGAGAGAT+TGG + chr3_2:53303030-53303049 Msa0411160:CDS 35.0%
AATCGATAAAGATGCAACCA+AGG + chr3_2:53303060-53303079 Msa0411160:CDS 35.0%
CTTTGCAATGTGTAATTCCT+TGG - chr3_2:53303080-53303099 None:intergenic 35.0%
CAAGGAATTACACATTGCAA+AGG + chr3_2:53303078-53303097 Msa0411160:CDS 35.0%
AGTTTCCCTTTCAATTTGCA+GGG + chr3_2:53303175-53303194 Msa0411160:intron 35.0%
TAGTACAAGCAAGACAGTAT+AGG + chr3_2:53303345-53303364 Msa0411160:intron 35.0%
AACTACATATATTGCACGCA+CGG - chr3_2:53303499-53303518 None:intergenic 35.0%
! GTTTTACCTGTTCAAAGTTG+TGG + chr3_2:53303774-53303793 Msa0411160:intron 35.0%
AGAACCAAATCATGATTCTC+TGG - chr3_2:53303839-53303858 None:intergenic 35.0%
! TTCACAGAAGTACAGCAAAT+TGG - chr3_2:53303868-53303887 None:intergenic 35.0%
! TTTGCTGTACTTCTGTGAAT+TGG + chr3_2:53303869-53303888 Msa0411160:intron 35.0%
ATTCATAGACAAGTCAACTC+TGG + chr3_2:53303901-53303920 Msa0411160:intron 35.0%
TGGTCTCAAAACGACTTAAA+TGG + chr3_2:53303960-53303979 Msa0411160:intron 35.0%
GGTCTCAAAACGACTTAAAT+GGG + chr3_2:53303961-53303980 Msa0411160:intron 35.0%
ACAAATTAATAGTGCTGCCT+CGG - chr3_2:53303990-53304009 None:intergenic 35.0%
AACATCCAGCAACATACTTT+GGG - chr3_2:53304033-53304052 None:intergenic 35.0%
AAACATCCAGCAACATACTT+TGG - chr3_2:53304034-53304053 None:intergenic 35.0%
CTAAAAAACTCCCACATATC+AGG - chr3_2:53304524-53304543 None:intergenic 35.0%
! TGGCATTTAAGTTATCCAGA+AGG + chr3_2:53304638-53304657 Msa0411160:CDS 35.0%
TTGTTCCATACAATCCTCTT+TGG + chr3_2:53304682-53304701 Msa0411160:CDS 35.0%
GGATTAAGAAAAGAGTCACA+TGG - chr3_2:53304920-53304939 None:intergenic 35.0%
! CTCTTTTCTTAATCCTTTGC+AGG + chr3_2:53304925-53304944 Msa0411160:intron 35.0%
!!! TGAGGTTTTCTGGTTTTGTA+TGG + chr3_2:53304972-53304991 Msa0411160:CDS 35.0%
! TTTTGTATGGCATGACAATG+AGG + chr3_2:53304985-53305004 Msa0411160:CDS 35.0%
! AAAGGCTTTTGTTCATCCTA+AGG + chr3_2:53305082-53305101 Msa0411160:intron 35.0%
!! ACAAACCTTTGTTGTTGACT+TGG - chr3_2:53305314-53305333 None:intergenic 35.0%
AGTCAACAACAAAGGTTTGT+TGG + chr3_2:53305314-53305333 Msa0411160:intron 35.0%
GGTAGCATATAAGATGTTGT+TGG + chr3_2:53305474-53305493 Msa0411160:intron 35.0%
!! CAAGGTCATGTATTTTGAGA+CGG + chr3_2:53305607-53305626 Msa0411160:intron 35.0%
! GCTTTGTTATATGTATGCAC+AGG + chr3_2:53305664-53305683 Msa0411160:intron 35.0%
GTTAAATGATACCAGTCAAC+AGG - chr3_2:53305772-53305791 None:intergenic 35.0%
GCAATAATATCTTCCTGCAT+AGG - chr3_2:53305822-53305841 None:intergenic 35.0%
CACGAGAAACAATACTTTCT+TGG - chr3_2:53305967-53305986 None:intergenic 35.0%
GAGAGAAAGACAAGCATAAA+AGG - chr3_2:53306171-53306190 None:intergenic 35.0%
!!! CGCGTTTTTTTACTGTGTTT+TGG - chr3_2:53306425-53306444 None:intergenic 35.0%
CGGGAAAAAGGAAAAAAAGA+GGG - chr3_2:53306502-53306521 None:intergenic 35.0%
ACGGGAAAAAGGAAAAAAAG+AGG - chr3_2:53306503-53306522 None:intergenic 35.0%
TCCTAGAAAGACAAACTGAT+TGG + chr3_2:53306543-53306562 Msa0411160:intron 35.0%
TCCAATCAGTTTGTCTTTCT+AGG - chr3_2:53306547-53306566 None:intergenic 35.0%
GAGGGAAATATTGGATGAAT+AGG - chr3_2:53306583-53306602 None:intergenic 35.0%
GGTTGTTATGTCGAAGTTTA+GGG - chr3_2:53306750-53306769 None:intergenic 35.0%
TGGTTGTTATGTCGAAGTTT+AGG - chr3_2:53306751-53306770 None:intergenic 35.0%
TAATCTATGAAGTCCAGTTG+CGG - chr3_2:53306808-53306827 None:intergenic 35.0%
! AGAATATCTTTTCACTCGGT+AGG - chr3_2:53306839-53306858 None:intergenic 35.0%
TACCGAGTGAAAAGATATTC+TGG + chr3_2:53306838-53306857 Msa0411160:intron 35.0%
! GTCCAGAATATCTTTTCACT+CGG - chr3_2:53306843-53306862 None:intergenic 35.0%
GGAATAAAAAGAGGAAGGAA+AGG - chr3_2:53307149-53307168 None:intergenic 35.0%
CATAACCTACAATTAGCAAG+AGG + chr3_2:53307183-53307202 Msa0411160:intron 35.0%
TTAGACCTCTTGCTAATTGT+AGG - chr3_2:53307191-53307210 None:intergenic 35.0%
GGTGTTAAGCTTATAGACTT+TGG + chr3_2:53307274-53307293 Msa0411160:intron 35.0%
CAATTATGGGAGATAAGCTT+TGG - chr3_2:53307361-53307380 None:intergenic 35.0%
CAAAGCTTATCTCCCATAAT+TGG + chr3_2:53307359-53307378 Msa0411160:intron 35.0%
TATCTCCCATAATTGGACAA+CGG + chr3_2:53307366-53307385 Msa0411160:intron 35.0%
AAATGAAGATTCTTCAGGAG+TGG + chr3_2:53307757-53307776 Msa0411160:CDS 35.0%
GTTTCATCATCAGATTTCTC+AGG - chr3_2:53307869-53307888 None:intergenic 35.0%
!! TTTGCAGATGATGTTTTGGA+AGG - chr3_2:53307965-53307984 None:intergenic 35.0%
! TTTCTCAGTTTTGCTTCTTC+CGG - chr3_2:53307999-53308018 None:intergenic 35.0%
AAGCAAAACTGAGAAAACCA+CGG + chr3_2:53308003-53308022 Msa0411160:CDS 35.0%
TCAATATCATCATCGGACTT+TGG - chr3_2:53308091-53308110 None:intergenic 35.0%
! CTTTGTGTTCTAAGCAGAAA+AGG + chr3_2:53308426-53308445 Msa0411160:intron 35.0%
CTAAGCAGAAAAGGTTACTA+AGG + chr3_2:53308435-53308454 Msa0411160:intron 35.0%
GAAAAGGTTACTAAGGGAAA+AGG + chr3_2:53308442-53308461 Msa0411160:intron 35.0%
! ATAATGCACCTTCATTGACT+GGG + chr3_2:53308639-53308658 Msa0411160:intron 35.0%
TTTCAGAATGTCGGTAAATG+TGG - chr3_2:53308751-53308770 None:intergenic 35.0%
ACCAAGTAGTTTCAGAATGT+CGG - chr3_2:53308760-53308779 None:intergenic 35.0%
! AATTATGCCGTTCAGGTTAA+AGG - chr3_2:53308940-53308959 None:intergenic 35.0%
TATGTTAGGGTTTAAAGAGG+TGG + chr3_2:53309256-53309275 Msa0411160:intron 35.0%
ATGTTAGGGTTTAAAGAGGT+GGG + chr3_2:53309257-53309276 Msa0411160:intron 35.0%
TTTAAAGAGGTGGGGAAAAT+TGG + chr3_2:53309266-53309285 Msa0411160:intron 35.0%
TTAAAGAGGTGGGGAAAATT+GGG + chr3_2:53309267-53309286 Msa0411160:intron 35.0%
! ACATAATCATGTTTGAGGCA+CGG - chr3_2:53309425-53309444 None:intergenic 35.0%
!!! CTTGATAGCTGACTTTTTTG+GGG - chr3_2:53309555-53309574 None:intergenic 35.0%
!!! GCTTGATAGCTGACTTTTTT+GGG - chr3_2:53309556-53309575 None:intergenic 35.0%
!!! AGCTTGATAGCTGACTTTTT+TGG - chr3_2:53309557-53309576 None:intergenic 35.0%
!! GTTTGTTGTTCTCTTCAGAT+TGG - chr3_2:53309818-53309837 None:intergenic 35.0%
! CATAATTTAGTGCAGCCTTT+TGG + chr3_2:53309849-53309868 Msa0411160:three_prime_UTR 35.0%
GTACACAATAAACTACATGC+TGG - chr3_2:53309887-53309906 None:intergenic 35.0%
! TTTGAAGTTGACACCTTTCT+GGG + chr3_2:53309985-53310004 Msa0411160:three_prime_UTR 35.0%
GCTGAGTTTAAATCCCCTTA+CGG + chr3_2:53301562-53301581 Msa0411160:intron 40.0%
CTGAGTTTAAATCCCCTTAC+GGG + chr3_2:53301563-53301582 Msa0411160:intron 40.0%
GCACACCATTTACAACAGAA+GGG - chr3_2:53301729-53301748 None:intergenic 40.0%
AGCACACCATTTACAACAGA+AGG - chr3_2:53301730-53301749 None:intergenic 40.0%
TCTGTTGTAAATGGTGTGCT+AGG + chr3_2:53301730-53301749 Msa0411160:intron 40.0%
CTGTTGTAAATGGTGTGCTA+GGG + chr3_2:53301731-53301750 Msa0411160:intron 40.0%
ACTCAGTTCAATCGAACAAC+TGG - chr3_2:53301868-53301887 None:intergenic 40.0%
TTGTTCGATTGAACTGAGTG+TGG + chr3_2:53301869-53301888 Msa0411160:five_prime_UTR 40.0%
AAAGACTTGGAAACTGATGG+AGG + chr3_2:53302026-53302045 Msa0411160:CDS 40.0%
AAGACTTGGAAACTGATGGA+GGG + chr3_2:53302027-53302046 Msa0411160:CDS 40.0%
AGATAAGAAAGTTGAGGGTG+TGG + chr3_2:53302112-53302131 Msa0411160:CDS 40.0%
TAAGAAAGATGAAGATGGGG+TGG + chr3_2:53302151-53302170 Msa0411160:CDS 40.0%
AAGAAAGATGAAGATGGGGT+GGG + chr3_2:53302152-53302171 Msa0411160:CDS 40.0%
AAAGAGGATAAGAAAGCCGA+TGG + chr3_2:53302182-53302201 Msa0411160:CDS 40.0%
AAGAGGATAAGAAAGCCGAT+GGG + chr3_2:53302183-53302202 Msa0411160:CDS 40.0%
AGAGGATAAGAAAGACGATG+TGG + chr3_2:53302322-53302341 Msa0411160:CDS 40.0%
AGAGGAGAAGAAAGATGAAG+GGG + chr3_2:53302358-53302377 Msa0411160:CDS 40.0%
AGAGGAGAAGAAAGATGATG+GGG + chr3_2:53302394-53302413 Msa0411160:CDS 40.0%
! TGATGGTGCAGATGAAGTAA+AGG + chr3_2:53302445-53302464 Msa0411160:CDS 40.0%
! TGATAGTGTGAAAGAAGCAG+TGG + chr3_2:53302517-53302536 Msa0411160:CDS 40.0%
TGACATCCAAGAAATGGAAG+AGG + chr3_2:53302556-53302575 Msa0411160:CDS 40.0%
TGTCATCCTCTTCCATTTCT+TGG - chr3_2:53302565-53302584 None:intergenic 40.0%
GAAAATGGATGTTGATGCTG+AGG + chr3_2:53302610-53302629 Msa0411160:CDS 40.0%
! TAGCATTGAGGAGAAAGAAG+AGG + chr3_2:53302685-53302704 Msa0411160:CDS 40.0%
! AGCATTGAGGAGAAAGAAGA+GGG + chr3_2:53302686-53302705 Msa0411160:CDS 40.0%
GAAAGAAGAGGGTAATGATG+AGG + chr3_2:53302697-53302716 Msa0411160:CDS 40.0%
TGAGGAGAAAACTGAAGTAG+AGG + chr3_2:53302715-53302734 Msa0411160:CDS 40.0%
GAAAACTGAAGTAGAGGAGA+AGG + chr3_2:53302721-53302740 Msa0411160:CDS 40.0%
GAAATCTGAAGAAGAGACAG+AGG + chr3_2:53302763-53302782 Msa0411160:CDS 40.0%
!! GATCAAAAAAGCGTTCCAGA+GGG + chr3_2:53302918-53302937 Msa0411160:CDS 40.0%
CAGTTTCCCTTTCAATTTGC+AGG + chr3_2:53303174-53303193 Msa0411160:intron 40.0%
TCGTAAGCAAAAGTTAGCTG+AGG + chr3_2:53303298-53303317 Msa0411160:intron 40.0%
CGTAAGCAAAAGTTAGCTGA+GGG + chr3_2:53303299-53303318 Msa0411160:intron 40.0%
TCACTTCTCAACTCTTTGTC+CGG + chr3_2:53303381-53303400 Msa0411160:intron 40.0%
CTCAACTACAAGATTGAGTG+CGG + chr3_2:53303643-53303662 Msa0411160:intron 40.0%
AAGACTGCATTTCGATGAGA+TGG + chr3_2:53303750-53303769 Msa0411160:intron 40.0%
TGTATGCCACAACTTTGAAC+AGG - chr3_2:53303783-53303802 None:intergenic 40.0%
TGAATTCTGCGACTATGGTT+GGG - chr3_2:53303807-53303826 None:intergenic 40.0%
CATAGTCGCAGAATTCACTA+CGG + chr3_2:53303810-53303829 Msa0411160:intron 40.0%
TGTTCACAACACTTTCAACG+TGG + chr3_2:53304090-53304109 Msa0411160:intron 40.0%
GTTCACAACACTTTCAACGT+GGG + chr3_2:53304091-53304110 Msa0411160:intron 40.0%
ACAGCAAACGATATTGGGAT+AGG - chr3_2:53304202-53304221 None:intergenic 40.0%
!! ATCCCAATATCGTTTGCTGT+TGG + chr3_2:53304202-53304221 Msa0411160:intron 40.0%
!! TCCCAATATCGTTTGCTGTT+GGG + chr3_2:53304203-53304222 Msa0411160:intron 40.0%
ACCCAACAGCAAACGATATT+GGG - chr3_2:53304207-53304226 None:intergenic 40.0%
AACCCAACAGCAAACGATAT+TGG - chr3_2:53304208-53304227 None:intergenic 40.0%
ATCAAGAGTTGCGTGATATG+TGG + chr3_2:53304463-53304482 Msa0411160:intron 40.0%
TCAAGAGTTGCGTGATATGT+GGG + chr3_2:53304464-53304483 Msa0411160:intron 40.0%
GTGAAGTTGACCTGATATGT+GGG + chr3_2:53304511-53304530 Msa0411160:intron 40.0%
ACTATCATCAGTCTTCCTTC+TGG - chr3_2:53304656-53304675 None:intergenic 40.0%
TCCATACAATCCTCTTTGGA+AGG + chr3_2:53304686-53304705 Msa0411160:CDS 40.0%
TCCTTCCAAAGAGGATTGTA+TGG - chr3_2:53304690-53304709 None:intergenic 40.0%
!!! GTCACTTATTTTGAACCGGA+GGG - chr3_2:53305383-53305402 None:intergenic 40.0%
!!! AGTCACTTATTTTGAACCGG+AGG - chr3_2:53305384-53305403 None:intergenic 40.0%
TATGTGTGCAACAGTCAACA+AGG + chr3_2:53305589-53305608 Msa0411160:intron 40.0%
!!! GTCATGTATTTTGAGACGGA+GGG + chr3_2:53305611-53305630 Msa0411160:intron 40.0%
AGTCAACAGGGTTTCCTTTA+AGG - chr3_2:53305759-53305778 None:intergenic 40.0%
TTAAAGGAAACCCTGTTGAC+TGG + chr3_2:53305758-53305777 Msa0411160:intron 40.0%
CTGCATAGGCAGAAATTCAT+TGG - chr3_2:53305808-53305827 None:intergenic 40.0%
CAATGAATTTCTGCCTATGC+AGG + chr3_2:53305806-53305825 Msa0411160:intron 40.0%
!! TACTTCAAGAGGTTCTGGAA+AGG + chr3_2:53306082-53306101 Msa0411160:CDS 40.0%
AATAACCTGGAATTCATGGG+AGG - chr3_2:53306220-53306239 None:intergenic 40.0%
GCCAATAACAACCACAATTG+TGG + chr3_2:53306314-53306333 Msa0411160:intron 40.0%
GCCACAATTGTGGTTGTTAT+TGG - chr3_2:53306318-53306337 None:intergenic 40.0%
ACGAAAAAACGACGGGAAAA+AGG - chr3_2:53306514-53306533 None:intergenic 40.0%
AGCAGAGAAGAGGGAAATAT+TGG - chr3_2:53306592-53306611 None:intergenic 40.0%
TTTGTCACAAGCAGAGAAGA+GGG - chr3_2:53306601-53306620 None:intergenic 40.0%
! TTTTGTCACAAGCAGAGAAG+AGG - chr3_2:53306602-53306621 None:intergenic 40.0%
!! ACGGCCCGGTTTTTAAAAAT+TGG - chr3_2:53306625-53306644 None:intergenic 40.0%
CTTCCAATGATAAGAGAGCT+TGG + chr3_2:53307097-53307116 Msa0411160:intron 40.0%
AGACCAAGCTCTCTTATCAT+TGG - chr3_2:53307103-53307122 None:intergenic 40.0%
CCTCCCAAAAATGACTATTG+TGG - chr3_2:53307256-53307275 None:intergenic 40.0%
!!! CCACAATAGTCATTTTTGGG+AGG + chr3_2:53307253-53307272 Msa0411160:intron 40.0%
AGCAAATAAGCACCAACCAT+TGG + chr3_2:53307297-53307316 Msa0411160:intron 40.0%
AAATAAGCACCAACCATTGG+AGG + chr3_2:53307300-53307319 Msa0411160:intron 40.0%
AATAAGCACCAACCATTGGA+GGG + chr3_2:53307301-53307320 Msa0411160:intron 40.0%
ATGCACCGTTGTCCAATTAT+GGG - chr3_2:53307374-53307393 None:intergenic 40.0%
GTCGATGAAATGTAAGGATG+AGG + chr3_2:53307439-53307458 Msa0411160:intron 40.0%
AGATGTTGAATTGAAGGCTG+TGG + chr3_2:53307489-53307508 Msa0411160:intron 40.0%
! TGTGGCTGTATACTTTTCAG+AGG + chr3_2:53307726-53307745 Msa0411160:intron 40.0%
TGACACAGAAGATGAATCAG+AGG + chr3_2:53307796-53307815 Msa0411160:CDS 40.0%
GACACAGAAGATGAATCAGA+GGG + chr3_2:53307797-53307816 Msa0411160:CDS 40.0%
AAACGCCACAGAAATCTGAA+AGG + chr3_2:53307885-53307904 Msa0411160:CDS 40.0%
AACGCCACAGAAATCTGAAA+GGG + chr3_2:53307886-53307905 Msa0411160:CDS 40.0%
TCTTCCCTTTCAGATTTCTG+TGG - chr3_2:53307893-53307912 None:intergenic 40.0%
AGGGAAGATAAGAGTGATTC+TGG + chr3_2:53307905-53307924 Msa0411160:CDS 40.0%
GGGAAGATAAGAGTGATTCT+GGG + chr3_2:53307906-53307925 Msa0411160:CDS 40.0%
GATTTCTTAGGTGCTCTCTT+AGG - chr3_2:53308055-53308074 None:intergenic 40.0%
ATCATCATCGGACTTTGGTT+TGG - chr3_2:53308086-53308105 None:intergenic 40.0%
AGGAAGAAGAAAAGTGAGCA+AGG + chr3_2:53308133-53308152 Msa0411160:CDS 40.0%
GGAAGAAGAAAAGTGAGCAA+GGG + chr3_2:53308134-53308153 Msa0411160:CDS 40.0%
GAAGAAGAAAAGTGAGCAAG+GGG + chr3_2:53308135-53308154 Msa0411160:CDS 40.0%
AAGAAGAAAAGTGAGCAAGG+GGG + chr3_2:53308136-53308155 Msa0411160:CDS 40.0%
! GACTTTGAGGAAGACTTAGT+TGG - chr3_2:53308187-53308206 None:intergenic 40.0%
AGCTTTCTCTTTGGACTTTG+AGG - chr3_2:53308200-53308219 None:intergenic 40.0%
TCAAAGTCCAAAGAGAAAGC+TGG + chr3_2:53308199-53308218 Msa0411160:CDS 40.0%
GCATTTACCAGCTTTCTCTT+TGG - chr3_2:53308209-53308228 None:intergenic 40.0%
CATAATGCACCTTCATTGAC+TGG + chr3_2:53308638-53308657 Msa0411160:intron 40.0%
! TAATGCACCTTCATTGACTG+GGG + chr3_2:53308640-53308659 Msa0411160:intron 40.0%
!! ACCGACATTCTGAAACTACT+TGG + chr3_2:53308756-53308775 Msa0411160:CDS 40.0%
TACTGCAAATTATGCCGTTC+AGG - chr3_2:53308947-53308966 None:intergenic 40.0%
TGTTAGGGTTTAAAGAGGTG+GGG + chr3_2:53309258-53309277 Msa0411160:intron 40.0%
TTTAACGTCTTGACCAACCA+AGG + chr3_2:53309311-53309330 Msa0411160:intron 40.0%
ACCTTGGTTCACCATAGTAT+GGG - chr3_2:53309361-53309380 None:intergenic 40.0%
AACCTTGGTTCACCATAGTA+TGG - chr3_2:53309362-53309381 None:intergenic 40.0%
! TCAGGCTTAAGGTTTAAGAC+CGG - chr3_2:53309667-53309686 None:intergenic 40.0%
ACAATCAACAGTCAGGCTTA+AGG - chr3_2:53309678-53309697 None:intergenic 40.0%
! TTAAGCCTGACTGTTGATTG+TGG + chr3_2:53309677-53309696 Msa0411160:three_prime_UTR 40.0%
CTAATCCACAATCAACAGTC+AGG - chr3_2:53309685-53309704 None:intergenic 40.0%
GTTGTTCTCTTCAGATTGGA+TGG - chr3_2:53309814-53309833 None:intergenic 40.0%
! ATTTAGTGCAGCCTTTTGGT+TGG + chr3_2:53309853-53309872 Msa0411160:three_prime_UTR 40.0%
!! TTTAGTGCAGCCTTTTGGTT+GGG + chr3_2:53309854-53309873 Msa0411160:three_prime_UTR 40.0%
!! CAGAAAGGTGTCAACTTCAA+AGG - chr3_2:53309986-53310005 None:intergenic 40.0%
!! CTTTGAAGTTGACACCTTTC+TGG + chr3_2:53309984-53310003 Msa0411160:three_prime_UTR 40.0%
GCAAATTACACTTGAGGTGC+TGG + chr3_2:53301503-53301522 Msa0411160:intron 45.0%
GATTTAAACTCAGCACCTCG+AGG - chr3_2:53301556-53301575 None:intergenic 45.0%
! ATTTTACAACCGGCCCGTAA+GGG - chr3_2:53301579-53301598 None:intergenic 45.0%
TTCGATTGAACTGAGTGTGG+TGG + chr3_2:53301872-53301891 Msa0411160:five_prime_UTR 45.0%
AAGCAAGATCAGTATGGGTG+AGG + chr3_2:53301920-53301939 Msa0411160:exon 45.0%
TATGGGTGAGGAAGAAGTAG+TGG + chr3_2:53301932-53301951 Msa0411160:exon 45.0%
TTCAAATGGAGGTAGCGTTC+CGG + chr3_2:53301974-53301993 Msa0411160:CDS 45.0%
TAGCGTTCCGGTGAAATCAT+TGG + chr3_2:53301986-53302005 Msa0411160:CDS 45.0%
AGCGTTCCGGTGAAATCATT+GGG + chr3_2:53301987-53302006 Msa0411160:CDS 45.0%
ACATCCCCCAATGATTTCAC+CGG - chr3_2:53301996-53302015 None:intergenic 45.0%
AACTGATGGAGGGAAAGTCT+TGG + chr3_2:53302037-53302056 Msa0411160:CDS 45.0%
GGGAAAGTCTTGGAGAGTAA+TGG + chr3_2:53302047-53302066 Msa0411160:CDS 45.0%
! GGAGAGTAATGGAGTCAAAG+AGG + chr3_2:53302058-53302077 Msa0411160:CDS 45.0%
! GAAAGTTGAGGGTGTGGAAA+AGG + chr3_2:53302118-53302137 Msa0411160:CDS 45.0%
AGAGGATAAGAAAGCCGATG+GGG + chr3_2:53302184-53302203 Msa0411160:CDS 45.0%
! TTTTACTTCATCGCCCCCAT+CGG - chr3_2:53302201-53302220 None:intergenic 45.0%
GGATAAGAAAGACGATGTGG+TGG + chr3_2:53302325-53302344 Msa0411160:CDS 45.0%
! TGTGGTGGAAGAAGTGAAAG+AGG + chr3_2:53302340-53302359 Msa0411160:CDS 45.0%
AGGGGCTGATGAAGTAAAAG+AGG + chr3_2:53302376-53302395 Msa0411160:CDS 45.0%
TGGGGTGGAAGAAGTAAAAG+AGG + chr3_2:53302412-53302431 Msa0411160:CDS 45.0%
TGGTGCAGATGAAGTAAAGG+TGG + chr3_2:53302448-53302467 Msa0411160:CDS 45.0%
TAGTGTGAAAGAAGCAGTGG+AGG + chr3_2:53302520-53302539 Msa0411160:CDS 45.0%
GGATGTTGATGCTGAGGTTA+AGG + chr3_2:53302616-53302635 Msa0411160:CDS 45.0%
GAAGTAGAGGAGAAGGAAGA+AGG + chr3_2:53302728-53302747 Msa0411160:CDS 45.0%
TGAAGAAGAGACAGAGGAGA+AGG + chr3_2:53302769-53302788 Msa0411160:CDS 45.0%
GGAGAAAACTGAAGCAGAGA+CGG + chr3_2:53302808-53302827 Msa0411160:CDS 45.0%
AGATAAGGCAGAGGGTAGTA+AGG + chr3_2:53302886-53302905 Msa0411160:CDS 45.0%
!! GGATCAAAAAAGCGTTCCAG+AGG + chr3_2:53302917-53302936 Msa0411160:CDS 45.0%
!! AAAAAAGCGTTCCAGAGGGA+AGG + chr3_2:53302922-53302941 Msa0411160:CDS 45.0%
TTCCAGAGGGAAGGTTAATG+AGG + chr3_2:53302931-53302950 Msa0411160:CDS 45.0%
CGATCACTAGTTGGAGTCTT+TGG - chr3_2:53302998-53303017 None:intergenic 45.0%
CTGATTTCCTTTCTCGCACT+GGG - chr3_2:53303021-53303040 None:intergenic 45.0%
! ACTGATTTCCTTTCTCGCAC+TGG - chr3_2:53303022-53303041 None:intergenic 45.0%
CACGACCCTGCAAATTGAAA+GGG - chr3_2:53303183-53303202 None:intergenic 45.0%
!! AAGAGAGGCACCATACCATT+GGG - chr3_2:53303226-53303245 None:intergenic 45.0%
!! AAAGAGAGGCACCATACCAT+TGG - chr3_2:53303227-53303246 None:intergenic 45.0%
CGCACTCAATCTTGTAGTTG+AGG - chr3_2:53303645-53303664 None:intergenic 45.0%
GAATTCTGCGACTATGGTTG+GGG - chr3_2:53303806-53303825 None:intergenic 45.0%
GTGAATTCTGCGACTATGGT+TGG - chr3_2:53303808-53303827 None:intergenic 45.0%
CGTAGTGAATTCTGCGACTA+TGG - chr3_2:53303812-53303831 None:intergenic 45.0%
GTGGCCAGAGAATCATGATT+TGG + chr3_2:53303832-53303851 Msa0411160:intron 45.0%
AATAGCAGAGACCACTTAGC+TGG + chr3_2:53303940-53303959 Msa0411160:intron 45.0%
!!! TCGTTTTGAGACCAGCTAAG+TGG - chr3_2:53303954-53303973 None:intergenic 45.0%
ACGACTTAAATGGGTAACCG+AGG + chr3_2:53303970-53303989 Msa0411160:intron 45.0%
! CCAGCAACATACTTTGGGAA+TGG - chr3_2:53304028-53304047 None:intergenic 45.0%
CCATTCCCAAAGTATGTTGC+TGG + chr3_2:53304025-53304044 Msa0411160:intron 45.0%
! TGCTGTCAACATTTTCAGCG+TGG + chr3_2:53304169-53304188 Msa0411160:intron 45.0%
! GCTGTCAACATTTTCAGCGT+GGG + chr3_2:53304170-53304189 Msa0411160:intron 45.0%
CAGTACGTTATTTGAGTCCG+TGG - chr3_2:53304421-53304440 None:intergenic 45.0%
CAACTCTTGATGTACGTTGG+GGG - chr3_2:53304454-53304473 None:intergenic 45.0%
GCAACTCTTGATGTACGTTG+GGG - chr3_2:53304455-53304474 None:intergenic 45.0%
CGCAACTCTTGATGTACGTT+GGG - chr3_2:53304456-53304475 None:intergenic 45.0%
ACGCAACTCTTGATGTACGT+TGG - chr3_2:53304457-53304476 None:intergenic 45.0%
CAAGAGTTGCGTGATATGTG+GGG + chr3_2:53304465-53304484 Msa0411160:intron 45.0%
AAGAGTTGCGTGATATGTGG+GGG + chr3_2:53304466-53304485 Msa0411160:intron 45.0%
GGTGAAGTTGACCTGATATG+TGG + chr3_2:53304510-53304529 Msa0411160:intron 45.0%
! ACAATCCTCTTTGGAAGGAG+AGG + chr3_2:53304691-53304710 Msa0411160:CDS 45.0%
! CAATCCTCTTTGGAAGGAGA+GGG + chr3_2:53304692-53304711 Msa0411160:CDS 45.0%
TAATCCTTTGCAGGCAGTTC+AGG + chr3_2:53304934-53304953 Msa0411160:intron 45.0%
TTAACAACCTTTGGCCGACA+AGG - chr3_2:53305175-53305194 None:intergenic 45.0%
TGATGAAACATTGCTCCCTC+CGG + chr3_2:53305365-53305384 Msa0411160:intron 45.0%
!!! GGTCATGTATTTTGAGACGG+AGG + chr3_2:53305610-53305629 Msa0411160:intron 45.0%
! ATATGTATGCACAGGGGTAC+AGG + chr3_2:53305672-53305691 Msa0411160:intron 45.0%
! TATGTATGCACAGGGGTACA+GGG + chr3_2:53305673-53305692 Msa0411160:intron 45.0%
!!! TGCTAAGCTGACGGACTTTT+TGG + chr3_2:53305839-53305858 Msa0411160:CDS 45.0%
TGTGGTACTTGCAGACAAAG+AGG + chr3_2:53305884-53305903 Msa0411160:CDS 45.0%
! ATCAGTCAAGCAAGAAGCGT+AGG + chr3_2:53306018-53306037 Msa0411160:intron 45.0%
CTGTAAAACGAGGTACACCA+AGG + chr3_2:53306045-53306064 Msa0411160:CDS 45.0%
GCTAGTACTTCAAGAGGTTC+TGG + chr3_2:53306077-53306096 Msa0411160:CDS 45.0%
ACAGCTGTATGCCACAATTG+TGG - chr3_2:53306328-53306347 None:intergenic 45.0%
TGTGGCATACAGCTGTGTAA+CGG + chr3_2:53306332-53306351 Msa0411160:intron 45.0%
CAAAGGCCATCTGCATAGTA+CGG - chr3_2:53306363-53306382 None:intergenic 45.0%
!!! CTGTGTTTTGGCTGCAATTC+AGG - chr3_2:53306413-53306432 None:intergenic 45.0%
!! CAGTGTAGTGGGTAGAAGTA+TGG - chr3_2:53306771-53306790 None:intergenic 45.0%
CATGCACCGTTGTCCAATTA+TGG - chr3_2:53307375-53307394 None:intergenic 45.0%
GCGAGATTTATTTGTGACCG+TGG - chr3_2:53308023-53308042 None:intergenic 45.0%
TTCTTAGGTGCTCTCTTAGG+TGG - chr3_2:53308052-53308071 None:intergenic 45.0%
GAGGAAGACTTAGTTGGAGT+TGG - chr3_2:53308181-53308200 None:intergenic 45.0%
TCACGCAACTGATCATCTGT+GGG - chr3_2:53308493-53308512 None:intergenic 45.0%
ATCACGCAACTGATCATCTG+TGG - chr3_2:53308494-53308513 None:intergenic 45.0%
TTCACCATAGTATGGGAGAC+TGG - chr3_2:53309354-53309373 None:intergenic 45.0%
TCCCATACTATGGTGAACCA+AGG + chr3_2:53309357-53309376 Msa0411160:intron 45.0%
GTGAACCAAGGTTCAAACGT+CGG + chr3_2:53309369-53309388 Msa0411160:intron 45.0%
GCTCATGATTCAGAAAGAGC+TGG + chr3_2:53309574-53309593 Msa0411160:CDS 45.0%
ATCCTCCTCTTCATCTTCCT+CGG - chr3_2:53309627-53309646 None:intergenic 45.0%
ATGCCGAGAAAGATGAAGAC+CGG + chr3_2:53309645-53309664 Msa0411160:CDS 45.0%
AGACCGGTCTTCATCTTTCT+CGG - chr3_2:53309651-53309670 None:intergenic 45.0%
!! ATATCATATAAAATATTTAA+AGG + chr3_2:53305064-53305083 Msa0411160:intron 5.0%
GTTTAAATCCCCTTACGGGC+CGG + chr3_2:53301567-53301586 Msa0411160:intron 50.0%
! TTTTACAACCGGCCCGTAAG+GGG - chr3_2:53301578-53301597 None:intergenic 50.0%
! CATTTTACAACCGGCCCGTA+AGG - chr3_2:53301580-53301599 None:intergenic 50.0%
GCGTTCCGGTGAAATCATTG+GGG + chr3_2:53301988-53302007 Msa0411160:CDS 50.0%
CGTTCCGGTGAAATCATTGG+GGG + chr3_2:53301989-53302008 Msa0411160:CDS 50.0%
! GGGTGTGGAAAAGGTACAAG+AGG + chr3_2:53302127-53302146 Msa0411160:CDS 50.0%
TGGGGTGGGAGAAGTAAAAG+AGG + chr3_2:53302166-53302185 Msa0411160:CDS 50.0%
GAGGATAAGAAAGCCGATGG+GGG + chr3_2:53302185-53302204 Msa0411160:CDS 50.0%
TGGGGGCGATGAAGTAAAAG+AGG + chr3_2:53302202-53302221 Msa0411160:CDS 50.0%
!! GGAGAAGAAAGATGATGGGG+TGG + chr3_2:53302397-53302416 Msa0411160:CDS 50.0%
AGATGCAGAGGGTAGCATTG+AGG + chr3_2:53302673-53302692 Msa0411160:CDS 50.0%
AGAGACAGAGGAGAAGGAAG+AGG + chr3_2:53302775-53302794 Msa0411160:CDS 50.0%
GAGACAGAGGAGAAGGAAGA+GGG + chr3_2:53302776-53302795 Msa0411160:CDS 50.0%
GAAGGAAGAGGGCGATGAAA+AGG + chr3_2:53302787-53302806 Msa0411160:CDS 50.0%
GAAAACTGAAGCAGAGACGG+AGG + chr3_2:53302811-53302830 Msa0411160:CDS 50.0%
GAGGGTAGTAAGGCTGAGAA+AGG + chr3_2:53302896-53302915 Msa0411160:CDS 50.0%
CTCCTCATTAACCTTCCCTC+TGG - chr3_2:53302936-53302955 None:intergenic 50.0%
! CTAGTTGGAGTCTTTGGCTC+TGG - chr3_2:53302992-53303011 None:intergenic 50.0%
CCACGACCCTGCAAATTGAA+AGG - chr3_2:53303184-53303203 None:intergenic 50.0%
CCTTTCAATTTGCAGGGTCG+TGG + chr3_2:53303181-53303200 Msa0411160:intron 50.0%
AAGATTGAGTGCGGTGTACG+TGG + chr3_2:53303652-53303671 Msa0411160:intron 50.0%
AGTCGCAGAATTCACTACGG+TGG + chr3_2:53303813-53303832 Msa0411160:intron 50.0%
ACGTGGGACTAATGCAACTG+TGG + chr3_2:53304107-53304126 Msa0411160:intron 50.0%
CGTGGGACTAATGCAACTGT+GGG + chr3_2:53304108-53304127 Msa0411160:intron 50.0%
TTGACCTGAACTGCCTGCAA+AGG - chr3_2:53304941-53304960 None:intergenic 50.0%
TTTGAGTCCTTGTCGGCCAA+AGG + chr3_2:53305165-53305184 Msa0411160:intron 50.0%
! ATGTATGCACAGGGGTACAG+GGG + chr3_2:53305674-53305693 Msa0411160:intron 50.0%
CACAGTTGTGGTTGCATGAG+GGG - chr3_2:53305868-53305887 None:intergenic 50.0%
CCACAGTTGTGGTTGCATGA+GGG - chr3_2:53305869-53305888 None:intergenic 50.0%
ACCACAGTTGTGGTTGCATG+AGG - chr3_2:53305870-53305889 None:intergenic 50.0%
GTCTGCAAGTACCACAGTTG+TGG - chr3_2:53305880-53305899 None:intergenic 50.0%
! AGTCAAGCAAGAAGCGTAGG+CGG + chr3_2:53306021-53306040 Msa0411160:intron 50.0%
AAACGAGGTACACCAAGGTC+TGG + chr3_2:53306050-53306069 Msa0411160:CDS 50.0%
GTTGTCCTCCCATGAATTCC+AGG + chr3_2:53306212-53306231 Msa0411160:intron 50.0%
GAGCATCCGTACTATGCAGA+TGG + chr3_2:53306354-53306373 Msa0411160:intron 50.0%
CTATGCAGATGGCCTTTGCA+TGG + chr3_2:53306365-53306384 Msa0411160:intron 50.0%
! TGGCCTTTGCATGGCGTTTT+AGG + chr3_2:53306374-53306393 Msa0411160:intron 50.0%
! GGCCTTTGCATGGCGTTTTA+GGG + chr3_2:53306375-53306394 Msa0411160:intron 50.0%
AGCCCTAAAACGCCATGCAA+AGG - chr3_2:53306380-53306399 None:intergenic 50.0%
TACCAGTTCAATCTACGGCC+CGG - chr3_2:53306639-53306658 None:intergenic 50.0%
CTTCTACCCACTACACTGCA+TGG + chr3_2:53306773-53306792 Msa0411160:intron 50.0%
! CTTTTCACTCGGTAGGTGAG+AGG - chr3_2:53306832-53306851 None:intergenic 50.0%
GAAAGGGGAAAGTGGTCACT+GGG - chr3_2:53307132-53307151 None:intergenic 50.0%
AGAGGAAGGAAAGGGGAAAG+TGG - chr3_2:53307140-53307159 None:intergenic 50.0%
CTATGAGCTACTCCCTCCAA+TGG - chr3_2:53307316-53307335 None:intergenic 50.0%
CATTGGAGGGAGTAGCTCAT+AGG + chr3_2:53307314-53307333 Msa0411160:intron 50.0%
GGGAGTAGCTCATAGGAACA+AGG + chr3_2:53307321-53307340 Msa0411160:intron 50.0%
TCTGCAAAGAAAGAGTCCGC+CGG + chr3_2:53307977-53307996 Msa0411160:CDS 50.0%
! CTCAGTTTTGCTTCTTCCGG+CGG - chr3_2:53307996-53308015 None:intergenic 50.0%
TTAGGTGCTCTCTTAGGTGG+TGG - chr3_2:53308049-53308068 None:intergenic 50.0%
CTGATCATCTGTGGGACTTG+AGG - chr3_2:53308485-53308504 None:intergenic 50.0%
AACAACGCCCCAGTCAATGA+AGG - chr3_2:53308650-53308669 None:intergenic 50.0%
!! TTCATTGACTGGGGCGTTGT+TGG + chr3_2:53308649-53308668 Msa0411160:intron 50.0%
ACGTCTTGACCAACCAAGGT+TGG + chr3_2:53309315-53309334 Msa0411160:intron 50.0%
CGTCTTGACCAACCAAGGTT+GGG + chr3_2:53309316-53309335 Msa0411160:intron 50.0%
AAGCTAGACCCAACCTTGGT+TGG - chr3_2:53309327-53309346 None:intergenic 50.0%
AACCAAGGTTGGGTCTAGCT+TGG + chr3_2:53309326-53309345 Msa0411160:intron 50.0%
! ACCAAGGTTGGGTCTAGCTT+GGG + chr3_2:53309327-53309346 Msa0411160:intron 50.0%
ACCAAGGTTCAAACGTCGGT+TGG + chr3_2:53309373-53309392 Msa0411160:intron 50.0%
! CCAAGGTTCAAACGTCGGTT+GGG + chr3_2:53309374-53309393 Msa0411160:intron 50.0%
TGAAGAAGCAGATGAGTCCG+AGG + chr3_2:53309607-53309626 Msa0411160:CDS 50.0%
TGAGTCCGAGGAAGATGAAG+AGG + chr3_2:53309619-53309638 Msa0411160:CDS 50.0%
AACTGAAGCAGAGACGGAGG+AGG + chr3_2:53302814-53302833 Msa0411160:CDS 55.0%
CCTTCCCTCTCCTTCCAAAG+AGG - chr3_2:53304699-53304718 None:intergenic 55.0%
! CCTCTTTGGAAGGAGAGGGA+AGG + chr3_2:53304696-53304715 Msa0411160:CDS 55.0%
CCCTCATGCAACCACAACTG+TGG + chr3_2:53305866-53305885 Msa0411160:CDS 55.0%
!! CGTAGGCGGACTGTAAAACG+AGG + chr3_2:53306035-53306054 Msa0411160:CDS 55.0%
GAGGTACACCAAGGTCTGGT+GGG + chr3_2:53306054-53306073 Msa0411160:CDS 55.0%
AGGTACACCAAGGTCTGGTG+GGG + chr3_2:53306055-53306074 Msa0411160:CDS 55.0%
! GGTGGGGCTAGTACTTCAAG+AGG + chr3_2:53306071-53306090 Msa0411160:CDS 55.0%
CATCGCAGTAGTAGCTGGTC+TGG - chr3_2:53306457-53306476 None:intergenic 55.0%
CAGACCAGCTACTACTGCGA+TGG + chr3_2:53306455-53306474 Msa0411160:intron 55.0%
TGTGCCATCGCAGTAGTAGC+TGG - chr3_2:53306462-53306481 None:intergenic 55.0%
AACCGGGCCGTAGATTGAAC+TGG + chr3_2:53306634-53306653 Msa0411160:intron 55.0%
GCAGAGCCATGCAGTGTAGT+GGG - chr3_2:53306782-53306801 None:intergenic 55.0%
AGCAGAGCCATGCAGTGTAG+TGG - chr3_2:53306783-53306802 None:intergenic 55.0%
GGAAAGGGGAAAGTGGTCAC+TGG - chr3_2:53307133-53307152 None:intergenic 55.0%
GAGCTACTCCCTCCAATGGT+TGG - chr3_2:53307312-53307331 None:intergenic 55.0%
TGACAACAGGGGAGAGCTCA+TGG - chr3_2:53308231-53308250 None:intergenic 55.0%
!! ATTGACTGGGGCGTTGTTGG+TGG + chr3_2:53308652-53308671 Msa0411160:intron 55.0%
! CCAAGGTTGGGTCTAGCTTG+GGG + chr3_2:53309328-53309347 Msa0411160:intron 55.0%
CCCAACCGACGTTTGAACCT+TGG - chr3_2:53309377-53309396 None:intergenic 55.0%
GTCCGAGGAAGATGAAGAGG+AGG + chr3_2:53309622-53309641 Msa0411160:CDS 55.0%
!! GTGCAGCCTTTTGGTTGGGT+TGG + chr3_2:53309858-53309877 Msa0411160:three_prime_UTR 55.0%
TGGCAGCCAACCCAACCAAA+AGG - chr3_2:53309867-53309886 None:intergenic 55.0%
TGAAGCAGAGACGGAGGAGG+AGG + chr3_2:53302817-53302836 Msa0411160:CDS 60.0%
CGCACTGGGCGATCACTAGT+TGG - chr3_2:53303007-53303026 None:intergenic 60.0%
GTGATCGCCCAGTGCGAGAA+AGG + chr3_2:53303011-53303030 Msa0411160:CDS 60.0%
CGAGGTACACCAAGGTCTGG+TGG + chr3_2:53306053-53306072 Msa0411160:CDS 60.0%
GTACTAGCCCCACCAGACCT+TGG - chr3_2:53306065-53306084 None:intergenic 60.0%
!!! GCATGGCGTTTTAGGGCTGC+AGG + chr3_2:53306382-53306401 Msa0411160:intron 60.0%
! ATGGCTCTGCTGTCCGCAAC+TGG + chr3_2:53306792-53306811 Msa0411160:intron 60.0%
GGGGAAAGTGGTCACTGGGA+GGG - chr3_2:53307128-53307147 None:intergenic 60.0%
AGGGGAAAGTGGTCACTGGG+AGG - chr3_2:53307129-53307148 None:intergenic 60.0%
CCCCAAGCTAGACCCAACCT+TGG - chr3_2:53309331-53309350 None:intergenic 60.0%
GGGGCCAGTCTCCCATACTA+TGG + chr3_2:53309347-53309366 Msa0411160:intron 60.0%
AGCAGAGACGGAGGAGGAGG+AGG + chr3_2:53302820-53302839 Msa0411160:CDS 65.0%
AGAGACGGAGGAGGAGGAGG+AGG + chr3_2:53302823-53302842 Msa0411160:CDS 65.0%
AGTGCGGTGTACGTGGCTGC+CGG + chr3_2:53303659-53303678 Msa0411160:intron 65.0%
CTGCCGGCATACGCTGTTGC+TGG + chr3_2:53303675-53303694 Msa0411160:intron 65.0%
CCGCCAGCAACAGCGTATGC+CGG - chr3_2:53303681-53303700 None:intergenic 65.0%
CCGGCATACGCTGTTGCTGG+CGG + chr3_2:53303678-53303697 Msa0411160:intron 65.0%
GCATACGCTGTTGCTGGCGG+TGG + chr3_2:53303681-53303700 Msa0411160:intron 65.0%
!! GACTGGGGCGTTGTTGGTGG+TGG + chr3_2:53308655-53308674 Msa0411160:intron 65.0%
GACGGAGGAGGAGGAGGAGG+AGG + chr3_2:53302826-53302845 Msa0411160:CDS 70.0%
GGAGGAGGAGGAGGAGGAGG+AGG + chr3_2:53302829-53302848 Msa0411160:CDS 70.0%
GGAGGAGGAGGAGGACGACG+AGG + chr3_2:53302838-53302857 Msa0411160:CDS 70.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 53300960 53310053 53300960 ID=Msa0411160;Name=Msa0411160
chr3_2 mRNA 53300960 53310053 53300960 ID=Msa0411160-mRNA-1;Parent=Msa0411160;Name=Msa0411160-mRNA-1;_AED=0.07;_eAED=0.07;_QI=160|0.9|1|1|0.8|0.81|11|380|753
chr3_2 exon 53300960 53301055 53300960 ID=Msa0411160-mRNA-1:exon:10608;Parent=Msa0411160-mRNA-1
chr3_2 exon 53301869 53303099 53301869 ID=Msa0411160-mRNA-1:exon:10609;Parent=Msa0411160-mRNA-1
chr3_2 exon 53303196 53303229 53303196 ID=Msa0411160-mRNA-1:exon:10610;Parent=Msa0411160-mRNA-1
chr3_2 exon 53304638 53304717 53304638 ID=Msa0411160-mRNA-1:exon:10611;Parent=Msa0411160-mRNA-1
chr3_2 exon 53304947 53305006 53304947 ID=Msa0411160-mRNA-1:exon:10612;Parent=Msa0411160-mRNA-1
chr3_2 exon 53305828 53305905 53305828 ID=Msa0411160-mRNA-1:exon:10613;Parent=Msa0411160-mRNA-1
chr3_2 exon 53306023 53306103 53306023 ID=Msa0411160-mRNA-1:exon:10614;Parent=Msa0411160-mRNA-1
chr3_2 exon 53307746 53308220 53307746 ID=Msa0411160-mRNA-1:exon:10615;Parent=Msa0411160-mRNA-1
chr3_2 exon 53308443 53308552 53308443 ID=Msa0411160-mRNA-1:exon:10616;Parent=Msa0411160-mRNA-1
chr3_2 exon 53308747 53308777 53308747 ID=Msa0411160-mRNA-1:exon:10617;Parent=Msa0411160-mRNA-1
chr3_2 exon 53309528 53310053 53309528 ID=Msa0411160-mRNA-1:exon:10618;Parent=Msa0411160-mRNA-1
chr3_2 five_prime_UTR 53300960 53301055 53300960 ID=Msa0411160-mRNA-1:five_prime_utr;Parent=Msa0411160-mRNA-1
chr3_2 five_prime_UTR 53301869 53301932 53301869 ID=Msa0411160-mRNA-1:five_prime_utr;Parent=Msa0411160-mRNA-1
chr3_2 CDS 53301933 53303099 53301933 ID=Msa0411160-mRNA-1:cds;Parent=Msa0411160-mRNA-1
chr3_2 CDS 53303196 53303229 53303196 ID=Msa0411160-mRNA-1:cds;Parent=Msa0411160-mRNA-1
chr3_2 CDS 53304638 53304717 53304638 ID=Msa0411160-mRNA-1:cds;Parent=Msa0411160-mRNA-1
chr3_2 CDS 53304947 53305006 53304947 ID=Msa0411160-mRNA-1:cds;Parent=Msa0411160-mRNA-1
chr3_2 CDS 53305828 53305905 53305828 ID=Msa0411160-mRNA-1:cds;Parent=Msa0411160-mRNA-1
chr3_2 CDS 53306023 53306103 53306023 ID=Msa0411160-mRNA-1:cds;Parent=Msa0411160-mRNA-1
chr3_2 CDS 53307746 53308220 53307746 ID=Msa0411160-mRNA-1:cds;Parent=Msa0411160-mRNA-1
chr3_2 CDS 53308443 53308552 53308443 ID=Msa0411160-mRNA-1:cds;Parent=Msa0411160-mRNA-1
chr3_2 CDS 53308747 53308777 53308747 ID=Msa0411160-mRNA-1:cds;Parent=Msa0411160-mRNA-1
chr3_2 CDS 53309528 53309673 53309528 ID=Msa0411160-mRNA-1:cds;Parent=Msa0411160-mRNA-1
chr3_2 three_prime_UTR 53309674 53310053 53309674 ID=Msa0411160-mRNA-1:three_prime_utr;Parent=Msa0411160-mRNA-1
Gene Sequence

>Msa0411160

ATGGGTGAGGAAGAAGTAGTGGCTGAAGTTTCTAAGACTGATTCAAATGGAGGTAGCGTTCCGGTGAAATCATTGGGGGATGTTGTTGAGAAGAAAGACTTGGAAACTGATGGAGGGAAAGTCTTGGAGAGTAATGGAGTCAAAGAGGTGAAAGAAAATGATGTAAAAGAAATTGAAGAAGATAAGAAAGTTGAGGGTGTGGAAAAGGTACAAGAGGATAAGAAAGATGAAGATGGGGTGGGAGAAGTAAAAGAGGATAAGAAAGCCGATGGGGGCGATGAAGTAAAAGAGGATAAGAAAAATGATGGAGTGGAAGAAGTAAAAGATGAAAAGAAAGACAATGTAGCTGAAGTAAAAGAGGATAAGAAAGATGATGTGGTAAAAGTAAAAGAGGATAAGAAAGACGATGTGGTGGAAGAAGTGAAAGAGGAGAAGAAAGATGAAGGGGCTGATGAAGTAAAAGAGGAGAAGAAAGATGATGGGGTGGAAGAAGTAAAAGAGGATAAGGAAGTTGATGGTGCAGATGAAGTAAAGGTGGAAAAGAAAGATAATGAGGGGGAAGAAGTAAAAGATGATATGGAAGTTGATAGTGTGAAAGAAGCAGTGGAGGATAAGAATGATGATGACATCCAAGAAATGGAAGAGGATGACAAAAATGTTCCTGAATCTGAGAATGAGAAAATGGATGTTGATGCTGAGGTTAAGGAAACTACAGAAGATAAAGAAGAAAAGGAAAAAGAAGATGCAGAGGGTAGCATTGAGGAGAAAGAAGAGGGTAATGATGAGGAGAAAACTGAAGTAGAGGAGAAGGAAGAAGGCGATGACAATGAGAAATCTGAAGAAGAGACAGAGGAGAAGGAAGAGGGCGATGAAAAGGAGAAAACTGAAGCAGAGACGGAGGAGGAGGAGGAGGAGGAGGACGACGAGGATACTATTGATAAATCAAAAGAAGAAGATAAGGCAGAGGGTAGTAAGGCTGAGAAAGGATCAAAAAAGCGTTCCAGAGGGAAGGTTAATGAGGAGAAAGTGAAAGACAAAAAGAAGGAACTGAAGCAGCCAGAGCCAAAGACTCCAACTAGTGATCGCCCAGTGCGAGAAAGGAAATCAGTTGAGAGATTGGTAGCATTAATCGATAAAGATGCAACCAAGGAATTACACATTGCAAAGGGTCGTGGCACACCTTTAAAAGATATACCCAATGTGGCATTTAAGTTATCCAGAAGGAAGACTGATGATAGTCTCAAGTTGTTCCATACAATCCTCTTTGGAAGGAGAGGGAAGGCAGTTCAGGTCAAGAGTAATATATTGAGGTTTTCTGGTTTTGTATGGCATGACAATGAGGAAGATATTATTGCTAAGCTGACGGACTTTTTGGTTGCCCCTCATGCAACCACAACTGTGGTACTTGCAGACAAAGAGTCAAGCAAGAAGCGTAGGCGGACTGTAAAACGAGGTACACCAAGGTCTGGTGGGGCTAGTACTTCAAGAGGTTCTGGAAAGAGGCAGAAGAAAAATGAAGATTCTTCAGGAGTGGAGAAGAAGAGCACAACTGACACAGAAGATGAATCAGAGGGAGAAGAGAAAAATGAAGAAAATGAGGATGAACCTGAAAATGATATTCCTGAGAAATCTGATGATGAAACGCCACAGAAATCTGAAAGGGAAGATAAGAGTGATTCTGGGAGTGAATCTGAAGATGTGAAAAAAAGGAAAAGACCTTCCAAAACATCATCTGCAAAGAAAGAGTCCGCCGGAAGAAGCAAAACTGAGAAAACCACGGTCACAAATAAATCTCGCTCACCACCACCTAAGAGAGCACCTAAGAAATCATCAAATACCAAACCAAAGTCCGATGATGATATTGATGAAAGTCCAAAGGTATTTTCTAGGAAGAAGAAAAGTGAGCAAGGGGGAAAGCAGAAGATATCAACTCCAACTCCAACTAAGTCTTCCTCAAAGTCCAAAGAGAAAGCTGAAAAGGTTACTAAGGGAAAAGGCAAGAAGAAAGTGACATCCTCAAGTCCCACAGATGATCAGTTGCGTGATGCAATATGTGAAATTCTTAAAGAAGTTGACTTCAATACGGCCACATTTACCGACATTCTGAAACTACTTGCTAACAAATTTGATGTGGATCTCACCCCAAAAAAGTCAGCTATCAAGCTCATGATTCAGAAAGAGCTGGCAAGACTTGCTGAAGAAGCAGATGAGTCCGAGGAAGATGAAGAGGAGGATGCCGAGAAAGATGAAGACCGGTCTTAA
Protein sequence

>Msa0411160

MGEEEVVAEVSKTDSNGGSVPVKSLGDVVEKKDLETDGGKVLESNGVKEVKENDVKEIEEDKKVEGVEKVQEDKKDEDGVGEVKEDKKADGGDEVKEDKKNDGVEEVKDEKKDNVAEVKEDKKDDVVKVKEDKKDDVVEEVKEEKKDEGADEVKEEKKDDGVEEVKEDKEVDGADEVKVEKKDNEGEEVKDDMEVDSVKEAVEDKNDDDIQEMEEDDKNVPESENEKMDVDAEVKETTEDKEEKEKEDAEGSIEEKEEGNDEEKTEVEEKEEGDDNEKSEEETEEKEEGDEKEKTEAETEEEEEEEDDEDTIDKSKEEDKAEGSKAEKGSKKRSRGKVNEEKVKDKKKELKQPEPKTPTSDRPVRERKSVERLVALIDKDATKELHIAKGRGTPLKDIPNVAFKLSRRKTDDSLKLFHTILFGRRGKAVQVKSNILRFSGFVWHDNEEDIIAKLTDFLVAPHATTTVVLADKESSKKRRRTVKRGTPRSGGASTSRGSGKRQKKNEDSSGVEKKSTTDTEDESEGEEKNEENEDEPENDIPEKSDDETPQKSEREDKSDSGSESEDVKKRKRPSKTSSAKKESAGRSKTEKTTVTNKSRSPPPKRAPKKSSNTKPKSDDDIDESPKVFSRKKKSEQGGKQKISTPTPTKSSSKSKEKAEKVTKGKGKKKVTSSSPTDDQLRDAICEILKEVDFNTATFTDILKLLANKFDVDLTPKKSAIKLMIQKELARLAEEADESEEDEEEDAEKDEDRS*