Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0693790 | XP_024637220.1 | 99.242 | 132 | 1 | 0 | 3 | 134 | 89 | 220 | 4.28e-87 | 263 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0693790 | sp|O23193|CBSX1_ARATH | 75.373 | 134 | 31 | 1 | 4 | 135 | 103 | 236 | 4.72e-69 | 210 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0693790 | I3SNY2 | 99.242 | 132 | 1 | 0 | 3 | 134 | 89 | 220 | 2.04e-87 | 263 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0000590 | Msa0693790 | 0.843263 | 1.560172e-58 | -8.615850e-47 |
Msa0006880 | Msa0693790 | 0.839606 | 1.433072e-57 | -8.615850e-47 |
Msa0008840 | Msa0693790 | 0.816891 | 4.377156e-52 | -8.615850e-47 |
Msa0015460 | Msa0693790 | 0.811449 | 6.961682e-51 | -8.615850e-47 |
Msa0017320 | Msa0693790 | 0.815657 | 8.261478e-52 | -8.615850e-47 |
Msa0026870 | Msa0693790 | 0.811740 | 6.018264e-51 | -8.615850e-47 |
Msa0029260 | Msa0693790 | 0.804759 | 1.851478e-49 | -8.615850e-47 |
Msa0036370 | Msa0693790 | 0.841781 | 3.859179e-58 | -8.615850e-47 |
Msa0038870 | Msa0693790 | 0.845996 | 2.865438e-59 | -8.615850e-47 |
Msa0043730 | Msa0693790 | 0.808845 | 2.535601e-50 | -8.615850e-47 |
Msa0047250 | Msa0693790 | 0.821347 | 4.236944e-53 | -8.615850e-47 |
Msa0049390 | Msa0693790 | 0.801842 | 7.438293e-49 | -8.615850e-47 |
Msa0052860 | Msa0693790 | 0.816294 | 5.955165e-52 | -8.615850e-47 |
Msa0055100 | Msa0693790 | 0.823496 | 1.342567e-53 | -8.615850e-47 |
Msa0055150 | Msa0693790 | 0.820032 | 8.495669e-53 | -8.615850e-47 |
Msa0057750 | Msa0693790 | 0.812269 | 4.616113e-51 | -8.615850e-47 |
Msa0061970 | Msa0693790 | 0.814762 | 1.306372e-51 | -8.615850e-47 |
Msa0065010 | Msa0693790 | 0.804586 | 2.011759e-49 | -8.615850e-47 |
Msa0065650 | Msa0693790 | 0.834035 | 3.781479e-56 | -8.615850e-47 |
Msa0068020 | Msa0693790 | 0.818930 | 1.515437e-52 | -8.615850e-47 |
Msa0072170 | Msa0693790 | 0.821676 | 3.557365e-53 | -8.615850e-47 |
Msa0074750 | Msa0693790 | 0.815202 | 1.042954e-51 | -8.615850e-47 |
Msa0084430 | Msa0693790 | 0.806511 | 7.939736e-50 | -8.615850e-47 |
Msa0086420 | Msa0693790 | 0.812909 | 3.344077e-51 | -8.615850e-47 |
Msa0090030 | Msa0693790 | 0.832269 | 1.040736e-55 | -8.615850e-47 |
Msa0091500 | Msa0693790 | 0.818839 | 1.589439e-52 | -8.615850e-47 |
Msa0092170 | Msa0693790 | 0.802110 | 6.552240e-49 | -8.615850e-47 |
Msa0101180 | Msa0693790 | 0.834789 | 2.445483e-56 | -8.615850e-47 |
Msa0103070 | Msa0693790 | 0.813924 | 2.001036e-51 | -8.615850e-47 |
Msa0103790 | Msa0693790 | 0.816173 | 6.337173e-52 | -8.615850e-47 |
Msa0108870 | Msa0693790 | 0.816493 | 5.374445e-52 | -8.615850e-47 |
Msa0109590 | Msa0693790 | 0.805461 | 1.319841e-49 | -8.615850e-47 |
Msa0111080 | Msa0693790 | 0.821388 | 4.145218e-53 | -8.615850e-47 |
Msa0112300 | Msa0693790 | -0.800594 | 1.339495e-48 | -8.615850e-47 |
Msa0113240 | Msa0693790 | 0.807078 | 6.026182e-50 | -8.615850e-47 |
Msa0115460 | Msa0693790 | 0.829036 | 6.445281e-55 | -8.615850e-47 |
Msa0118540 | Msa0693790 | 0.830090 | 3.570726e-55 | -8.615850e-47 |
Msa0120540 | Msa0693790 | 0.818000 | 2.463110e-52 | -8.615850e-47 |
Msa0606810 | Msa0693790 | 0.802299 | 5.992704e-49 | -8.615850e-47 |
Msa0607510 | Msa0693790 | 0.833689 | 4.617280e-56 | -8.615850e-47 |
Msa0608710 | Msa0693790 | 0.805153 | 1.531449e-49 | -8.615850e-47 |
Msa0610130 | Msa0693790 | 0.803994 | 2.672073e-49 | -8.615850e-47 |
Msa0614990 | Msa0693790 | 0.835808 | 1.352709e-56 | -8.615850e-47 |
Msa0617260 | Msa0693790 | 0.838082 | 3.552318e-57 | -8.615850e-47 |
Msa0617450 | Msa0693790 | 0.803380 | 3.584000e-49 | -8.615850e-47 |
Msa0618200 | Msa0693790 | -0.814016 | 1.909406e-51 | -8.615850e-47 |
Msa0618930 | Msa0693790 | 0.806475 | 8.078379e-50 | -8.615850e-47 |
Msa0619920 | Msa0693790 | 0.837310 | 5.606531e-57 | -8.615850e-47 |
Msa0620330 | Msa0693790 | 0.849224 | 3.708978e-60 | -8.615850e-47 |
Msa0626940 | Msa0693790 | 0.843282 | 1.542175e-58 | -8.615850e-47 |
Msa0628290 | Msa0693790 | 0.835212 | 1.914085e-56 | -8.615850e-47 |
Msa0628740 | Msa0693790 | 0.808428 | 3.112948e-50 | -8.615850e-47 |
Msa0630950 | Msa0693790 | 0.875448 | 3.056264e-68 | -8.615850e-47 |
Msa0640940 | Msa0693790 | 0.801392 | 9.199470e-49 | -8.615850e-47 |
Msa0641320 | Msa0693790 | 0.805697 | 1.177688e-49 | -8.615850e-47 |
Msa0652300 | Msa0693790 | 0.821963 | 3.052641e-53 | -8.615850e-47 |
Msa0654620 | Msa0693790 | 0.800835 | 1.196355e-48 | -8.615850e-47 |
Msa0659140 | Msa0693790 | 0.827880 | 1.225356e-54 | -8.615850e-47 |
Msa0662630 | Msa0693790 | 0.808824 | 2.561833e-50 | -8.615850e-47 |
Msa0665080 | Msa0693790 | 0.823395 | 1.417400e-53 | -8.615850e-47 |
Msa0666140 | Msa0693790 | 0.810904 | 9.140923e-51 | -8.615850e-47 |
Msa0669190 | Msa0693790 | 0.849788 | 2.582226e-60 | -8.615850e-47 |
Msa0669720 | Msa0693790 | 0.810237 | 1.273413e-50 | -8.615850e-47 |
Msa0673470 | Msa0693790 | 0.803021 | 4.252142e-49 | -8.615850e-47 |
Msa0679360 | Msa0693790 | 0.810259 | 1.259844e-50 | -8.615850e-47 |
Msa0679550 | Msa0693790 | 0.829228 | 5.790132e-55 | -8.615850e-47 |
Msa0690550 | Msa0693790 | 0.811473 | 6.878040e-51 | -8.615850e-47 |
Msa0692110 | Msa0693790 | 0.802858 | 4.594390e-49 | -8.615850e-47 |
Msa0693790 | Msa0694840 | 0.804507 | 2.089690e-49 | -8.615850e-47 |
Msa0693790 | Msa0696420 | 0.808283 | 3.342096e-50 | -8.615850e-47 |
Msa0693790 | Msa0700230 | 0.829624 | 4.637452e-55 | -8.615850e-47 |
Msa0693790 | Msa0703910 | 0.804409 | 2.189942e-49 | -8.615850e-47 |
Msa0693790 | Msa0705600 | 0.830214 | 3.331829e-55 | -8.615850e-47 |
Msa0693790 | Msa0706390 | 0.807312 | 5.375561e-50 | -8.615850e-47 |
Msa0693790 | Msa0726080 | 0.806128 | 9.560689e-50 | -8.615850e-47 |
Msa0693790 | Msa0743530 | 0.810026 | 1.414273e-50 | -8.615850e-47 |
Msa0693790 | Msa0780880 | 0.822904 | 1.845718e-53 | -8.615850e-47 |
Msa0693790 | Msa0792780 | 0.810674 | 1.024727e-50 | -8.615850e-47 |
Msa0693790 | Msa0793390 | 0.822751 | 2.003736e-53 | -8.615850e-47 |
Msa0693790 | Msa0817260 | 0.803439 | 3.484196e-49 | -8.615850e-47 |
Msa0693790 | Msa0820530 | -0.818614 | 1.787809e-52 | -8.615850e-47 |
Msa0693790 | Msa0822170 | 0.818267 | 2.143348e-52 | -8.615850e-47 |
Msa0693790 | Msa0823500 | 0.802023 | 6.827924e-49 | -8.615850e-47 |
Msa0693790 | Msa0846230 | 0.806876 | 6.647684e-50 | -8.615850e-47 |
Msa0693790 | Msa0858440 | 0.822883 | 1.866825e-53 | -8.615850e-47 |
Msa0693790 | Msa0861470 | 0.822490 | 2.304277e-53 | -8.615850e-47 |
Msa0693790 | Msa0861570 | 0.832244 | 1.055782e-55 | -8.615850e-47 |
Msa0693790 | Msa0862500 | 0.802809 | 4.702967e-49 | -8.615850e-47 |
Msa0693790 | Msa0876860 | -0.837800 | 4.198276e-57 | -8.615850e-47 |
Msa0693790 | Msa0877710 | 0.814485 | 1.504557e-51 | -8.615850e-47 |
Msa0693790 | Msa0879860 | 0.829811 | 4.177454e-55 | -8.615850e-47 |
Msa0693790 | Msa0891600 | -0.805919 | 1.057963e-49 | -8.615850e-47 |
Msa0693790 | Msa0895310 | 0.808574 | 2.896997e-50 | -8.615850e-47 |
Msa0693790 | Msa0899290 | 0.802119 | 6.525392e-49 | -8.615850e-47 |
Msa0693790 | Msa0901320 | 0.812717 | 3.682968e-51 | -8.615850e-47 |
Msa0693790 | Msa0905380 | 0.842460 | 2.550813e-58 | -8.615850e-47 |
Msa0693790 | Msa0921870 | 0.847719 | 9.677660e-60 | -8.615850e-47 |
Msa0693790 | Msa0924150 | -0.881990 | 1.515331e-70 | -8.615850e-47 |
Msa0693790 | Msa0930140 | 0.824690 | 7.041210e-54 | -8.615850e-47 |
Msa0693790 | Msa0933290 | 0.811114 | 8.229728e-51 | -8.615850e-47 |
Msa0693790 | Msa0937330 | 0.830320 | 3.138520e-55 | -8.615850e-47 |
Msa0693790 | Msa0943270 | 0.847432 | 1.160788e-59 | -8.615850e-47 |
Msa0693790 | Msa0945120 | 0.801964 | 7.021975e-49 | -8.615850e-47 |
Msa0693790 | Msa0957870 | 0.802370 | 5.794496e-49 | -8.615850e-47 |
Msa0693790 | Msa0957970 | 0.811304 | 7.484251e-51 | -8.615850e-47 |
Msa0693790 | Msa0963090 | -0.848727 | 5.098574e-60 | -8.615850e-47 |
Msa0693790 | Msa0994370 | 0.812746 | 3.629807e-51 | -8.615850e-47 |
Msa0693790 | Msa1001080 | 0.806418 | 8.307352e-50 | -8.615850e-47 |
Msa0693790 | Msa1002600 | -0.808545 | 2.938550e-50 | -8.615850e-47 |
Msa0693790 | Msa1010460 | 0.831327 | 1.777373e-55 | -8.615850e-47 |
Msa0693790 | Msa1023180 | 0.805675 | 1.190700e-49 | -8.615850e-47 |
Msa0693790 | Msa1025940 | 0.808308 | 3.300467e-50 | -8.615850e-47 |
Msa0693790 | Msa1029080 | -0.804952 | 1.687546e-49 | -8.615850e-47 |
Msa0693790 | Msa1033520 | 0.846928 | 1.595625e-59 | -8.615850e-47 |
Msa0693790 | Msa1036740 | 0.823729 | 1.184144e-53 | -8.615850e-47 |
Msa0693790 | Msa1043050 | 0.814757 | 1.309734e-51 | -8.615850e-47 |
Msa0693790 | Msa1045450 | 0.828388 | 9.243779e-55 | -8.615850e-47 |
Msa0693790 | Msa1048750 | -0.805107 | 1.566228e-49 | -8.615850e-47 |
Msa0693790 | Msa1071320 | 0.832540 | 8.917898e-56 | -8.615850e-47 |
Msa0693790 | Msa1073400 | 0.812396 | 4.329314e-51 | -8.615850e-47 |
Msa0693790 | Msa1081790 | -0.809891 | 1.511979e-50 | -8.615850e-47 |
Msa0693790 | Msa1089840 | 0.802350 | 5.850210e-49 | -8.615850e-47 |
Msa0693790 | Msa1094430 | 0.844588 | 6.890423e-59 | -8.615850e-47 |
Msa0693790 | Msa1096550 | 0.827345 | 1.647020e-54 | -8.615850e-47 |
Msa0693790 | Msa1100520 | -0.800429 | 1.447323e-48 | -8.615850e-47 |
Msa0693790 | Msa1100530 | -0.841562 | 4.408566e-58 | -8.615850e-47 |
Msa0693790 | Msa1103660 | -0.828056 | 1.111101e-54 | -8.615850e-47 |
Msa0693790 | Msa1105500 | 0.802008 | 6.876942e-49 | -8.615850e-47 |
Msa0693790 | Msa1113880 | 0.818602 | 1.799609e-52 | -8.615850e-47 |
Msa0693790 | Msa1128330 | 0.806002 | 1.016226e-49 | -8.615850e-47 |
Msa0693790 | Msa1133250 | 0.813165 | 2.939094e-51 | -8.615850e-47 |
Msa0693790 | Msa1135800 | -0.812547 | 4.012275e-51 | -8.615850e-47 |
Msa0693790 | Msa1135810 | -0.827398 | 1.599626e-54 | -8.615850e-47 |
Msa0693790 | Msa1144970 | 0.819520 | 1.112552e-52 | -8.615850e-47 |
Msa0693790 | Msa1150710 | 0.810483 | 1.127028e-50 | -8.615850e-47 |
Msa0693790 | Msa1152520 | 0.827059 | 1.928488e-54 | -8.615850e-47 |
Msa0693790 | Msa1156170 | -0.801797 | 7.600814e-49 | -8.615850e-47 |
Msa0693790 | Msa1160360 | 0.830628 | 2.638244e-55 | -8.615850e-47 |
Msa0693790 | Msa1163870 | 0.835562 | 1.561546e-56 | -8.615850e-47 |
Msa0693790 | Msa1164020 | 0.815152 | 1.070177e-51 | -8.615850e-47 |
Msa0693790 | Msa1166090 | -0.803542 | 3.316601e-49 | -8.615850e-47 |
Msa0693790 | Msa1172130 | -0.820255 | 7.553458e-53 | -8.615850e-47 |
Msa0693790 | Msa1174310 | 0.847616 | 1.033328e-59 | -8.615850e-47 |
Msa0693790 | Msa1176360 | 0.831816 | 1.346866e-55 | -8.615850e-47 |
Msa0693790 | Msa1176980 | 0.818995 | 1.465330e-52 | -8.615850e-47 |
Msa0693790 | Msa1182640 | 0.811131 | 8.163243e-51 | -8.615850e-47 |
Msa0693790 | Msa1183770 | 0.825768 | 3.914958e-54 | -8.615850e-47 |
Msa0693790 | Msa1199710 | 0.800884 | 1.169041e-48 | -8.615850e-47 |
Msa0693790 | Msa1200320 | 0.802110 | 6.552700e-49 | -8.615850e-47 |
Msa0693790 | Msa1203880 | 0.833053 | 6.652010e-56 | -8.615850e-47 |
Msa0693790 | Msa1203900 | 0.805029 | 1.626262e-49 | -8.615850e-47 |
Msa0693790 | Msa1206310 | 0.800804 | 1.213618e-48 | -8.615850e-47 |
Msa0693790 | Msa1206360 | 0.803290 | 3.741252e-49 | -8.615850e-47 |
Msa0693790 | Msa1207350 | 0.804741 | 1.867194e-49 | -8.615850e-47 |
Msa0693790 | Msa1211000 | 0.808314 | 3.290837e-50 | -8.615850e-47 |
Msa0693790 | Msa1223810 | -0.800313 | 1.528131e-48 | -8.615850e-47 |
Msa0693790 | Msa1235400 | 0.808695 | 2.729739e-50 | -8.615850e-47 |
Msa0693790 | Msa1250110 | 0.817624 | 2.994641e-52 | -8.615850e-47 |
Msa0693790 | Msa1250730 | 0.818896 | 1.542996e-52 | -8.615850e-47 |
Msa0693790 | Msa1253810 | 0.827175 | 1.809097e-54 | -8.615850e-47 |
Msa0693790 | Msa1259400 | 0.805124 | 1.552978e-49 | -8.615850e-47 |
Msa0693790 | Msa1270660 | 0.821975 | 3.034158e-53 | -8.615850e-47 |
Msa0693790 | Msa1270730 | 0.802858 | 4.595214e-49 | -8.615850e-47 |
Msa0693790 | Msa1276510 | 0.806833 | 6.787696e-50 | -8.615850e-47 |
Msa0693790 | Msa1280620 | 0.805328 | 1.407646e-49 | -8.615850e-47 |
Msa0693790 | Msa1288510 | 0.822147 | 2.767872e-53 | -8.615850e-47 |
Msa0693790 | Msa1295930 | 0.806945 | 6.427212e-50 | -8.615850e-47 |
Msa0693790 | Msa1296300 | 0.826288 | 2.945767e-54 | -8.615850e-47 |
Msa0693790 | Msa1299010 | 0.818233 | 2.181672e-52 | -8.615850e-47 |
Msa0693790 | Msa1299700 | 0.807016 | 6.210155e-50 | -8.615850e-47 |
Msa0693790 | Msa1310660 | 0.820568 | 6.404667e-53 | -8.615850e-47 |
Msa0693790 | Msa1314770 | 0.840732 | 7.284858e-58 | -8.615850e-47 |
Msa0693790 | Msa1317270 | 0.823485 | 1.350357e-53 | -8.615850e-47 |
Msa0693790 | Msa1330890 | -0.820100 | 8.196529e-53 | -8.615850e-47 |
Msa0693790 | Msa1331280 | 0.826667 | 2.391712e-54 | -8.615850e-47 |
Msa0693790 | Msa1333420 | 0.806516 | 7.918585e-50 | -8.615850e-47 |
Msa0693790 | Msa1339190 | 0.826310 | 2.909636e-54 | -8.615850e-47 |
Msa0693790 | Msa1340830 | 0.836553 | 8.749076e-57 | -8.615850e-47 |
Msa0693790 | Msa1350690 | 0.834545 | 2.817451e-56 | -8.615850e-47 |
Msa0693790 | Msa1357430 | 0.827360 | 1.633339e-54 | -8.615850e-47 |
Msa0693790 | Msa1363700 | 0.844253 | 8.476752e-59 | -8.615850e-47 |
Msa0693790 | Msa1365860 | 0.812258 | 4.641612e-51 | -8.615850e-47 |
Msa0693790 | Msa1366650 | 0.831808 | 1.352863e-55 | -8.615850e-47 |
Msa0693790 | Msa1371090 | 0.850206 | 1.971938e-60 | -8.615850e-47 |
Msa0693790 | Msa1371240 | 0.812462 | 4.189001e-51 | -8.615850e-47 |
Msa0693790 | Msa1372290 | 0.815105 | 1.095983e-51 | -8.615850e-47 |
Msa0693790 | Msa1372310 | 0.815476 | 9.067684e-52 | -8.615850e-47 |
Msa0693790 | Msa1376130 | 0.803957 | 2.720613e-49 | -8.615850e-47 |
Msa0693790 | Msa1383350 | 0.824572 | 7.508177e-54 | -8.615850e-47 |
Msa0693790 | Msa1388860 | 0.800260 | 1.566488e-48 | -8.615850e-47 |
Msa0693790 | Msa1396400 | -0.801279 | 9.704479e-49 | -8.615850e-47 |
Msa0693790 | Msa1396940 | 0.826934 | 2.065898e-54 | -8.615850e-47 |
Msa0693790 | Msa1416260 | 0.808337 | 3.254413e-50 | -8.615850e-47 |
Msa0693790 | Msa1417810 | -0.809273 | 2.052963e-50 | -8.615850e-47 |
Msa0693790 | Msa1423910 | 0.800857 | 1.183671e-48 | -8.615850e-47 |
Msa0693790 | Msa1426920 | 0.834230 | 3.379398e-56 | -8.615850e-47 |
Msa0693790 | Msa1433600 | 0.808408 | 3.143621e-50 | -8.615850e-47 |
Msa0693790 | Msa1443610 | 0.804104 | 2.535260e-49 | -8.615850e-47 |
Msa0693790 | Msa1444740 | 0.800813 | 1.208457e-48 | -8.615850e-47 |
Msa0693790 | Msa1445400 | -0.811845 | 5.711094e-51 | -8.615850e-47 |
Msa0693790 | Msa1445940 | 0.807597 | 4.677233e-50 | -8.615850e-47 |
Msa0693790 | Msa1447890 | 0.805807 | 1.116937e-49 | -8.615850e-47 |
Msa0693790 | Msa1448630 | 0.833597 | 4.867984e-56 | -8.615850e-47 |
Msa0693790 | Msa1449350 | -0.810258 | 1.260632e-50 | -8.615850e-47 |
Msa0693790 | Msa1458030 | 0.833024 | 6.763303e-56 | -8.615850e-47 |
Msa0693790 | Msa1459760 | -0.819980 | 8.735770e-53 | -8.615850e-47 |
Msa0693790 | Msa1463600 | 0.811106 | 8.264679e-51 | -8.615850e-47 |
Msa0124550 | Msa0693790 | 0.817192 | 3.745246e-52 | -8.615850e-47 |
Msa0126880 | Msa0693790 | 0.809000 | 2.349275e-50 | -8.615850e-47 |
Msa0130520 | Msa0693790 | 0.820535 | 6.516504e-53 | -8.615850e-47 |
Msa0131450 | Msa0693790 | 0.814352 | 1.609345e-51 | -8.615850e-47 |
Msa0140400 | Msa0693790 | 0.824370 | 8.373707e-54 | -8.615850e-47 |
Msa0140510 | Msa0693790 | -0.804017 | 2.643009e-49 | -8.615850e-47 |
Msa0142500 | Msa0693790 | 0.820444 | 6.837906e-53 | -8.615850e-47 |
Msa0145150 | Msa0693790 | 0.821738 | 3.442366e-53 | -8.615850e-47 |
Msa0154920 | Msa0693790 | 0.828779 | 7.434959e-55 | -8.615850e-47 |
Msa0165970 | Msa0693790 | 0.805675 | 1.190700e-49 | -8.615850e-47 |
Msa0166750 | Msa0693790 | 0.821956 | 3.064969e-53 | -8.615850e-47 |
Msa0169300 | Msa0693790 | 0.800965 | 1.124881e-48 | -8.615850e-47 |
Msa0171980 | Msa0693790 | 0.810690 | 1.016954e-50 | -8.615850e-47 |
Msa0173330 | Msa0693790 | 0.813036 | 3.136500e-51 | -8.615850e-47 |
Msa0175290 | Msa0693790 | -0.804165 | 2.462891e-49 | -8.615850e-47 |
Msa0176330 | Msa0693790 | 0.835661 | 1.473586e-56 | -8.615850e-47 |
Msa0177270 | Msa0693790 | 0.833997 | 3.865591e-56 | -8.615850e-47 |
Msa0180120 | Msa0693790 | 0.803735 | 3.024911e-49 | -8.615850e-47 |
Msa0182280 | Msa0693790 | 0.806829 | 6.803517e-50 | -8.615850e-47 |
Msa0183460 | Msa0693790 | 0.837419 | 5.255751e-57 | -8.615850e-47 |
Msa0183870 | Msa0693790 | 0.812788 | 3.554338e-51 | -8.615850e-47 |
Msa0186310 | Msa0693790 | 0.824745 | 6.832609e-54 | -8.615850e-47 |
Msa0186770 | Msa0693790 | 0.830065 | 3.621611e-55 | -8.615850e-47 |
Msa0187490 | Msa0693790 | 0.812861 | 3.425793e-51 | -8.615850e-47 |
Msa0193600 | Msa0693790 | 0.806765 | 7.016079e-50 | -8.615850e-47 |
Msa0198940 | Msa0693790 | 0.840647 | 7.665271e-58 | -8.615850e-47 |
Msa0202930 | Msa0693790 | 0.809709 | 1.655102e-50 | -8.615850e-47 |
Msa0208810 | Msa0693790 | 0.840592 | 7.925709e-58 | -8.615850e-47 |
Msa0210250 | Msa0693790 | 0.808040 | 3.765282e-50 | -8.615850e-47 |
Msa0211650 | Msa0693790 | 0.802177 | 6.349126e-49 | -8.615850e-47 |
Msa0212750 | Msa0693790 | -0.815115 | 1.090352e-51 | -8.615850e-47 |
Msa0219100 | Msa0693790 | 0.826196 | 3.097322e-54 | -8.615850e-47 |
Msa0229360 | Msa0693790 | 0.824697 | 7.012398e-54 | -8.615850e-47 |
Msa0233370 | Msa0693790 | 0.801862 | 7.369064e-49 | -8.615850e-47 |
Msa0375980 | Msa0693790 | 0.801571 | 8.454987e-49 | -8.615850e-47 |
Msa0381700 | Msa0693790 | 0.822478 | 2.318296e-53 | -8.615850e-47 |
Msa0385490 | Msa0693790 | 0.821340 | 4.253988e-53 | -8.615850e-47 |
Msa0386040 | Msa0693790 | 0.827369 | 1.625410e-54 | -8.615850e-47 |
Msa0387910 | Msa0693790 | 0.830015 | 3.725539e-55 | -8.615850e-47 |
Msa0404700 | Msa0693790 | 0.830049 | 3.654875e-55 | -8.615850e-47 |
Msa0408390 | Msa0693790 | 0.810663 | 1.030432e-50 | -8.615850e-47 |
Msa0419520 | Msa0693790 | 0.823087 | 1.673172e-53 | -8.615850e-47 |
Msa0421260 | Msa0693790 | 0.808479 | 3.034678e-50 | -8.615850e-47 |
Msa0426810 | Msa0693790 | 0.807324 | 5.342619e-50 | -8.615850e-47 |
Msa0429950 | Msa0693790 | 0.815755 | 7.856390e-52 | -8.615850e-47 |
Msa0433530 | Msa0693790 | 0.800698 | 1.275325e-48 | -8.615850e-47 |
Msa0436190 | Msa0693790 | 0.819870 | 9.254657e-53 | -8.615850e-47 |
Msa0439890 | Msa0693790 | 0.853839 | 1.832810e-61 | -8.615850e-47 |
Msa0443430 | Msa0693790 | 0.805803 | 1.118981e-49 | -8.615850e-47 |
Msa0449820 | Msa0693790 | 0.825106 | 5.617968e-54 | -8.615850e-47 |
Msa0455590 | Msa0693790 | 0.801337 | 9.443033e-49 | -8.615850e-47 |
Msa0461590 | Msa0693790 | 0.817538 | 3.130977e-52 | -8.615850e-47 |
Msa0462540 | Msa0693790 | 0.813380 | 2.636167e-51 | -8.615850e-47 |
Msa0464900 | Msa0693790 | 0.804205 | 2.415777e-49 | -8.615850e-47 |
Msa0465550 | Msa0693790 | 0.813619 | 2.335083e-51 | -8.615850e-47 |
Msa0467260 | Msa0693790 | -0.814780 | 1.293840e-51 | -8.615850e-47 |
Msa0468130 | Msa0693790 | 0.804283 | 2.326880e-49 | -8.615850e-47 |
Msa0479330 | Msa0693790 | 0.816657 | 4.939163e-52 | -8.615850e-47 |
Msa0239940 | Msa0693790 | 0.833255 | 5.922058e-56 | -8.615850e-47 |
Msa0241740 | Msa0693790 | 0.851203 | 1.034302e-60 | -8.615850e-47 |
Msa0251770 | Msa0693790 | 0.803575 | 3.265529e-49 | -8.615850e-47 |
Msa0266210 | Msa0693790 | 0.828237 | 1.004951e-54 | -8.615850e-47 |
Msa0271360 | Msa0693790 | 0.806223 | 9.131336e-50 | -8.615850e-47 |
Msa0273650 | Msa0693790 | 0.805885 | 1.075521e-49 | -8.615850e-47 |
Msa0281480 | Msa0693790 | 0.818075 | 2.368570e-52 | -8.615850e-47 |
Msa0284820 | Msa0693790 | 0.807676 | 4.499800e-50 | -8.615850e-47 |
Msa0285060 | Msa0693790 | 0.830655 | 2.599090e-55 | -8.615850e-47 |
Msa0287670 | Msa0693790 | 0.834804 | 2.424364e-56 | -8.615850e-47 |
Msa0288730 | Msa0693790 | 0.827145 | 1.839350e-54 | -8.615850e-47 |
Msa0289400 | Msa0693790 | 0.818025 | 2.431033e-52 | -8.615850e-47 |
Msa0296920 | Msa0693790 | 0.816993 | 4.151475e-52 | -8.615850e-47 |
Msa0299520 | Msa0693790 | 0.802654 | 5.062278e-49 | -8.615850e-47 |
Msa0304840 | Msa0693790 | 0.822767 | 1.986496e-53 | -8.615850e-47 |
Msa0307560 | Msa0693790 | 0.805776 | 1.134000e-49 | -8.615850e-47 |
Msa0308200 | Msa0693790 | 0.842476 | 2.526607e-58 | -8.615850e-47 |
Msa0308220 | Msa0693790 | 0.837592 | 4.746866e-57 | -8.615850e-47 |
Msa0309880 | Msa0693790 | 0.815402 | 9.418533e-52 | -8.615850e-47 |
Msa0310430 | Msa0693790 | 0.812377 | 4.370645e-51 | -8.615850e-47 |
Msa0320610 | Msa0693790 | 0.856913 | 2.332074e-62 | -8.615850e-47 |
Msa0327410 | Msa0693790 | 0.800329 | 1.516448e-48 | -8.615850e-47 |
Msa0341230 | Msa0693790 | 0.808681 | 2.748409e-50 | -8.615850e-47 |
Msa0347610 | Msa0693790 | 0.813663 | 2.283500e-51 | -8.615850e-47 |
Msa0363170 | Msa0693790 | 0.830145 | 3.463336e-55 | -8.615850e-47 |
Msa0485680 | Msa0693790 | 0.804664 | 1.938079e-49 | -8.615850e-47 |
Msa0489610 | Msa0693790 | 0.852199 | 5.399393e-61 | -8.615850e-47 |
Msa0493920 | Msa0693790 | 0.823182 | 1.589490e-53 | -8.615850e-47 |
Msa0513440 | Msa0693790 | 0.800062 | 1.718481e-48 | -8.615850e-47 |
Msa0524600 | Msa0693790 | 0.822820 | 1.930951e-53 | -8.615850e-47 |
Msa0527910 | Msa0693790 | 0.823213 | 1.563688e-53 | -8.615850e-47 |
Msa0534410 | Msa0693790 | 0.874602 | 5.942548e-68 | -8.615850e-47 |
Msa0544840 | Msa0693790 | 0.803006 | 4.283300e-49 | -8.615850e-47 |
Msa0549780 | Msa0693790 | 0.808797 | 2.595321e-50 | -8.615850e-47 |
Msa0556790 | Msa0693790 | 0.802209 | 6.254758e-49 | -8.615850e-47 |
Msa0565620 | Msa0693790 | -0.842486 | 2.511106e-58 | -8.615850e-47 |
Msa0579370 | Msa0693790 | 0.806499 | 7.985228e-50 | -8.615850e-47 |
Msa0587190 | Msa0693790 | 0.810555 | 1.087565e-50 | -8.615850e-47 |
Msa0588240 | Msa0693790 | 0.840637 | 7.714845e-58 | -8.615850e-47 |
Msa0590650 | Msa0693790 | 0.867067 | 1.798299e-65 | -8.615850e-47 |
Msa0591710 | Msa0693790 | 0.815597 | 8.522762e-52 | -8.615850e-47 |
Msa0594910 | Msa0693790 | 0.814988 | 1.163563e-51 | -8.615850e-47 |
Msa0600450 | Msa0693790 | 0.815556 | 8.700708e-52 | -8.615850e-47 |
Msa0602370 | Msa0693790 | 0.808704 | 2.717923e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0693790 | MtrunA17_Chr4g0044531 | 99.242 | 132 | 1 | 0 | 3 | 134 | 89 | 220 | 3.94e-91 | 263 |
Msa0693790 | MtrunA17_Chr5g0401881 | 71.852 | 135 | 36 | 1 | 3 | 135 | 90 | 224 | 6.70e-68 | 204 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0693790 | AT4G36910.1 | 75.373 | 134 | 31 | 1 | 4 | 135 | 103 | 236 | 4.80e-70 | 210 |
Msa0693790 | AT4G34120.1 | 76.336 | 131 | 29 | 1 | 4 | 132 | 105 | 235 | 8.39e-68 | 205 |
Find 60 sgRNAs with CRISPR-Local
Find 190 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATAACTCACTTTCCTCTAAA+TGG | 0.210704 | 4_4:-62948904 | None:intergenic |
ATATTAATCATCCACTTTAA+AGG | 0.251710 | 4_4:-62948874 | None:intergenic |
GTGTAATATAATTTGCAAAT+TGG | 0.259555 | 4_4:+62949061 | Msa0693790:three_prime_UTR |
GTGTAATATAATTTGCAAAT+TGG | 0.259555 | 4_4:+62949101 | Msa0693790:three_prime_UTR |
GTTGCCTTCAGCTCCCCTTT+TGG | 0.268544 | 4_4:-62948832 | None:intergenic |
TTTAATTGAATAACTAATAT+AGG | 0.280295 | 4_4:+62949205 | Msa0693790:three_prime_UTR |
AATATACTCAAACCATTTAG+AGG | 0.307726 | 4_4:+62948892 | Msa0693790:three_prime_UTR |
TTAGCAATTGATACAATATC+AGG | 0.366237 | 4_4:+62946726 | Msa0693790:CDS |
GAGCCTATACATATATTAAC+TGG | 0.372485 | 4_4:-62948989 | None:intergenic |
GAAGTTGTGATGATACAAAT+AGG | 0.392574 | 4_4:-62949178 | None:intergenic |
CTCTTAAATCTTGATAGGTA+TGG | 0.403749 | 4_4:+62949011 | Msa0693790:three_prime_UTR |
TGTTCATGAATCCACTAGTC+TGG | 0.413754 | 4_4:+62947829 | Msa0693790:CDS |
TCCCTGATGTGGACAGTACT+TGG | 0.414548 | 4_4:+62947081 | Msa0693790:CDS |
TTCCAAGTACTGTCCACATC+AGG | 0.416952 | 4_4:-62947083 | None:intergenic |
TATCCAGTTAATATATGTAT+AGG | 0.419177 | 4_4:+62948986 | Msa0693790:three_prime_UTR |
GAACAGAATAAGTGGTCTTC+CGG | 0.425551 | 4_4:+62946530 | Msa0693790:CDS |
AATGGATGTATCAGCCCAAA+AGG | 0.452200 | 4_4:+62948817 | Msa0693790:three_prime_UTR |
TACTGTCCACATCAGGGAAT+AGG | 0.457871 | 4_4:-62947076 | None:intergenic |
GCTCTGCTGTCAAAGCGCTC+TGG | 0.464574 | 4_4:+62948714 | Msa0693790:CDS |
AGGCTCTCTTAAATCTTGAT+AGG | 0.467271 | 4_4:+62949006 | Msa0693790:three_prime_UTR |
TCTTAAATCTTGATAGGTAT+GGG | 0.482155 | 4_4:+62949012 | Msa0693790:three_prime_UTR |
AATCTTGATAGGTATGGGAT+TGG | 0.482379 | 4_4:+62949017 | Msa0693790:three_prime_UTR |
GTGCTCCTGTAGTCATAGTC+AGG | 0.491378 | 4_4:+62948774 | Msa0693790:three_prime_UTR |
GATTGATGATGAATGGAATC+TGG | 0.495080 | 4_4:+62946554 | Msa0693790:CDS |
GGAAAGAGGATGAGAAGATC+GGG | 0.495286 | 4_4:-62949157 | None:intergenic |
AGGAAAGAGGATGAGAAGAT+CGG | 0.496600 | 4_4:-62949158 | None:intergenic |
ACCTTCAGAGACCTTTAAAG+TGG | 0.499565 | 4_4:+62948863 | Msa0693790:three_prime_UTR |
CACAGAAACAATGTCGGGTA+AGG | 0.509548 | 4_4:-62948933 | None:intergenic |
TTTCCATCCTTGTCTACCAC+AGG | 0.513940 | 4_4:-62948559 | None:intergenic |
ATGGATGTATCAGCCCAAAA+GGG | 0.515238 | 4_4:+62948818 | Msa0693790:three_prime_UTR |
GCTAGGTTGGACTTATTACA+AGG | 0.520048 | 4_4:+62948673 | Msa0693790:intron |
AAGACCAATGGAAAAGTTGT+CGG | 0.522650 | 4_4:+62947779 | Msa0693790:CDS |
TTCCGGTGATTGATGATGAA+TGG | 0.523754 | 4_4:+62946547 | Msa0693790:CDS |
CTAGTCTGGAGGATGCTGCC+AGG | 0.524024 | 4_4:+62947843 | Msa0693790:CDS |
TCATGAACAACAAGTGGACT+TGG | 0.539611 | 4_4:-62947815 | None:intergenic |
CAGCCCAAAAGGGGAGCTGA+AGG | 0.543325 | 4_4:+62948828 | Msa0693790:three_prime_UTR |
CTTGTCAAGAACAGAATAAG+TGG | 0.555394 | 4_4:+62946522 | Msa0693790:CDS |
TTCCATTCATCATCAATCAC+CGG | 0.558122 | 4_4:-62946549 | None:intergenic |
GGCAGCATCCTCCAGACTAG+TGG | 0.560030 | 4_4:-62947840 | None:intergenic |
TGATGATACAAATAGGAAAG+AGG | 0.566347 | 4_4:-62949171 | None:intergenic |
ATCCACCTGACTATGACTAC+AGG | 0.567861 | 4_4:-62948779 | None:intergenic |
TGTCAAAGCGCTCTGGTGAG+AGG | 0.568489 | 4_4:+62948721 | Msa0693790:CDS |
CAACGCACAGAAACAATGTC+GGG | 0.580592 | 4_4:-62948938 | None:intergenic |
GTGGATTCATGAACAACAAG+TGG | 0.591533 | 4_4:-62947821 | None:intergenic |
CTACCTGTGGTAGACAAGGA+TGG | 0.592308 | 4_4:+62948556 | Msa0693790:CDS |
TGCAAGCCTATTCCCTGATG+TGG | 0.601040 | 4_4:+62947070 | Msa0693790:CDS |
AAGCTGCTTAGTAAGACCAA+TGG | 0.603514 | 4_4:+62947767 | Msa0693790:CDS |
GGTAGACAAGGATGGAAAGC+TGG | 0.604153 | 4_4:+62948564 | Msa0693790:CDS |
TCCACTTTAAAGGTCTCTGA+AGG | 0.610083 | 4_4:-62948864 | None:intergenic |
TCAACGCACAGAAACAATGT+CGG | 0.612466 | 4_4:-62948939 | None:intergenic |
TCCAAGTACTGTCCACATCA+GGG | 0.628366 | 4_4:-62947082 | None:intergenic |
ATTAGTTATTCAATTAAACA+AGG | 0.633322 | 4_4:-62949200 | None:intergenic |
AAAATATCGTCGACTACCTG+TGG | 0.634887 | 4_4:+62948543 | Msa0693790:CDS |
TCGACTACCTGTGGTAGACA+AGG | 0.635380 | 4_4:+62948552 | Msa0693790:CDS |
CTAGGTTGGACTTATTACAA+GGG | 0.642792 | 4_4:+62948674 | Msa0693790:intron |
TAGGTTGGACTTATTACAAG+GGG | 0.646121 | 4_4:+62948675 | Msa0693790:intron |
TGGATGTATCAGCCCAAAAG+GGG | 0.651140 | 4_4:+62948819 | Msa0693790:three_prime_UTR |
CTCCTGTAGTCATAGTCAGG+TGG | 0.655484 | 4_4:+62948777 | Msa0693790:three_prime_UTR |
TCATGAATCCACTAGTCTGG+AGG | 0.669039 | 4_4:+62947832 | Msa0693790:CDS |
AGGTTGGACTTATTACAAGG+GGG | 0.752318 | 4_4:+62948676 | Msa0693790:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTTAATTGAATAACTAATAT+AGG | + | chr4_4:62949205-62949224 | Msa0693790:three_prime_UTR | 10.0% |
!! | CAAACATTGAAATAAAATAT+GGG | - | chr4_4:62947530-62947549 | None:intergenic | 15.0% |
!! | TCAAACATTGAAATAAAATA+TGG | - | chr4_4:62947531-62947550 | None:intergenic | 15.0% |
!!! | TTTCTTTTTTACGAATAATT+AGG | + | chr4_4:62947897-62947916 | Msa0693790:intron | 15.0% |
!!! | TTCTTTTTTACGAATAATTA+GGG | + | chr4_4:62947898-62947917 | Msa0693790:intron | 15.0% |
!! | TAATTTCTTTCTTATATACT+AGG | + | chr4_4:62948330-62948349 | Msa0693790:intron | 15.0% |
!! | ATTAGTTATTCAATTAAACA+AGG | - | chr4_4:62949203-62949222 | None:intergenic | 15.0% |
!!! | TTTTGTTTTTGTTATAGCTT+TGG | + | chr4_4:62946494-62946513 | Msa0693790:intron | 20.0% |
!! | TGATTAATTTAGTTATGTTG+TGG | + | chr4_4:62946581-62946600 | Msa0693790:intron | 20.0% |
!!! | TTTCGTTTTGTTTCTTTTTT+TGG | + | chr4_4:62946667-62946686 | Msa0693790:intron | 20.0% |
!!! | TTCGTTTTGTTTCTTTTTTT+GGG | + | chr4_4:62946668-62946687 | Msa0693790:intron | 20.0% |
!!! | TACTTTAAAAACCAAAAGAA+TGG | - | chr4_4:62946808-62946827 | None:intergenic | 20.0% |
!! | GTTGTCATATAAACAATAAT+TGG | + | chr4_4:62947142-62947161 | Msa0693790:intron | 20.0% |
!!! | ATAACCAACCATATATTTTA+TGG | + | chr4_4:62947338-62947357 | Msa0693790:intron | 20.0% |
!!! | TAACCAACCATATATTTTAT+GGG | + | chr4_4:62947339-62947358 | Msa0693790:intron | 20.0% |
!! | CAATTAAAATTCCTAGATTA+AGG | - | chr4_4:62947657-62947676 | None:intergenic | 20.0% |
!!! | GTTCTAATTATTGTTTTGTA+TGG | + | chr4_4:62947723-62947742 | Msa0693790:intron | 20.0% |
!! | TATTCGTAAAAAAGAAATAG+TGG | - | chr4_4:62947894-62947913 | None:intergenic | 20.0% |
!!! | TAGTTAGTTTGTTAATAGTT+GGG | - | chr4_4:62948208-62948227 | None:intergenic | 20.0% |
!!! | TTAGTTAGTTTGTTAATAGT+TGG | - | chr4_4:62948209-62948228 | None:intergenic | 20.0% |
!! | TATTAACAAACTAACTAACT+AGG | + | chr4_4:62948211-62948230 | Msa0693790:intron | 20.0% |
!! | TTAAAAAAGATTCAATTCCA+TGG | - | chr4_4:62948416-62948435 | None:intergenic | 20.0% |
!!! | GATATTTTGTCTATTAAGAA+TGG | + | chr4_4:62948799-62948818 | Msa0693790:three_prime_UTR | 20.0% |
!! | ATATTAATCATCCACTTTAA+AGG | - | chr4_4:62948877-62948896 | None:intergenic | 20.0% |
!! | TATCCAGTTAATATATGTAT+AGG | + | chr4_4:62948986-62949005 | Msa0693790:three_prime_UTR | 20.0% |
!!! | GTGTAATATAATTTGCAAAT+TGG | + | chr4_4:62949061-62949080 | Msa0693790:three_prime_UTR | 20.0% |
!!! | GTGTAATATAATTTGCAAAT+TGG | + | chr4_4:62949061-62949080 | Msa0693790:three_prime_UTR | 20.0% |
! | TTAGCAATTGATACAATATC+AGG | + | chr4_4:62946726-62946745 | Msa0693790:CDS | 25.0% |
!! | TTGTTTACTGTACTTTAAAG+TGG | + | chr4_4:62946771-62946790 | Msa0693790:intron | 25.0% |
! | ATCATGATTTGACAGAAAAT+TGG | - | chr4_4:62947200-62947219 | None:intergenic | 25.0% |
!!! | AGGCTGATTTTGTTTTAATA+TGG | + | chr4_4:62947254-62947273 | Msa0693790:intron | 25.0% |
! | TAACCCATAAAATATATGGT+TGG | - | chr4_4:62947345-62947364 | None:intergenic | 25.0% |
! | AGCATAACCCATAAAATATA+TGG | - | chr4_4:62947349-62947368 | None:intergenic | 25.0% |
! | TCATGGGTGAAAATTTAAAT+AGG | - | chr4_4:62947617-62947636 | None:intergenic | 25.0% |
! | TTTGAGAAAAACCTTAATCT+AGG | + | chr4_4:62947643-62947662 | Msa0693790:intron | 25.0% |
! | ACTATTATCATTCTGTTAAC+TGG | + | chr4_4:62947687-62947706 | Msa0693790:intron | 25.0% |
! | ATAACAGGGAAAATAAAACT+GGG | - | chr4_4:62948172-62948191 | None:intergenic | 25.0% |
!!! | AGTTAGTTTGTTAATAGTTG+GGG | - | chr4_4:62948207-62948226 | None:intergenic | 25.0% |
! | ATATGTATGTGAAATGTGAT+AGG | - | chr4_4:62948259-62948278 | None:intergenic | 25.0% |
! | CATTTCACATACATATTGAA+TGG | + | chr4_4:62948263-62948282 | Msa0693790:intron | 25.0% |
!! | TTGATTTTCACATTTTTGCT+AGG | + | chr4_4:62948656-62948675 | Msa0693790:intron | 25.0% |
! | AATATACTCAAACCATTTAG+AGG | + | chr4_4:62948892-62948911 | Msa0693790:three_prime_UTR | 25.0% |
! | TCTTAAATCTTGATAGGTAT+GGG | + | chr4_4:62949012-62949031 | Msa0693790:three_prime_UTR | 25.0% |
!!! | TGTTTTTGTTATAGCTTTGG+AGG | + | chr4_4:62946497-62946516 | Msa0693790:intron | 30.0% |
!!! | TTTCTTTTTTTGGGTGATGT+AGG | + | chr4_4:62946677-62946696 | Msa0693790:intron | 30.0% |
TGATACAATATCAGGTACAT+AGG | + | chr4_4:62946734-62946753 | Msa0693790:intron | 30.0% | |
! | CGAAATTTCAACCATTCTTT+TGG | + | chr4_4:62946794-62946813 | Msa0693790:intron | 30.0% |
GCAAACAGACATAAACATAT+CGG | - | chr4_4:62946928-62946947 | None:intergenic | 30.0% | |
! | AGAAACAGTAGTTTCTGTTT+TGG | + | chr4_4:62946961-62946980 | Msa0693790:intron | 30.0% |
! | GAAACAGTAGTTTCTGTTTT+GGG | + | chr4_4:62946962-62946981 | Msa0693790:intron | 30.0% |
TTGTTTATATGACAACAGCA+AGG | - | chr4_4:62947138-62947157 | None:intergenic | 30.0% | |
CATCTTAAATTGATGCTAAC+TGG | + | chr4_4:62947225-62947244 | Msa0693790:intron | 30.0% | |
!!! | TATGCTCACAAGTTTTGATT+TGG | + | chr4_4:62947312-62947331 | Msa0693790:intron | 30.0% |
!!! | ATGCTCACAAGTTTTGATTT+GGG | + | chr4_4:62947313-62947332 | Msa0693790:intron | 30.0% |
!! | CAAATATAGAAGTGTTGCAT+TGG | - | chr4_4:62947467-62947486 | None:intergenic | 30.0% |
AAAATATGGGAAATGCTAAC+CGG | - | chr4_4:62947517-62947536 | None:intergenic | 30.0% | |
! | TTTTCTCAAATGCATGTCAT+GGG | - | chr4_4:62947633-62947652 | None:intergenic | 30.0% |
! | TTTTTCTCAAATGCATGTCA+TGG | - | chr4_4:62947634-62947653 | None:intergenic | 30.0% |
GATAACAGGGAAAATAAAAC+TGG | - | chr4_4:62948173-62948192 | None:intergenic | 30.0% | |
!! | GTTAGTTTGTTAATAGTTGG+GGG | - | chr4_4:62948206-62948225 | None:intergenic | 30.0% |
ATCAGTAACATAATAGTGAG+AGG | - | chr4_4:62948296-62948315 | None:intergenic | 30.0% | |
ACTAGGACAGCAAAAATATA+TGG | + | chr4_4:62948347-62948366 | Msa0693790:intron | 30.0% | |
ATGGATACGTGTAAATCAAA+TGG | - | chr4_4:62948397-62948416 | None:intergenic | 30.0% | |
! | ATTTGATTTACACGTATCCA+TGG | + | chr4_4:62948396-62948415 | Msa0693790:intron | 30.0% |
ACAACCAAGATTGTCATTAT+AGG | - | chr4_4:62948463-62948482 | None:intergenic | 30.0% | |
ACACTATTACTTCTTGTACT+AGG | + | chr4_4:62948506-62948525 | Msa0693790:intron | 30.0% | |
! | TTTTCACATTTTTGCTAGGT+TGG | + | chr4_4:62948660-62948679 | Msa0693790:intron | 30.0% |
ATAACTCACTTTCCTCTAAA+TGG | - | chr4_4:62948907-62948926 | None:intergenic | 30.0% | |
!!! | TTCTGTGCGTTGAATTTTTT+AGG | + | chr4_4:62948949-62948968 | Msa0693790:three_prime_UTR | 30.0% |
GAGCCTATACATATATTAAC+TGG | - | chr4_4:62948992-62949011 | None:intergenic | 30.0% | |
CTCTTAAATCTTGATAGGTA+TGG | + | chr4_4:62949011-62949030 | Msa0693790:three_prime_UTR | 30.0% | |
TGATGATACAAATAGGAAAG+AGG | - | chr4_4:62949174-62949193 | None:intergenic | 30.0% | |
GAAGTTGTGATGATACAAAT+AGG | - | chr4_4:62949181-62949200 | None:intergenic | 30.0% | |
CTTGTCAAGAACAGAATAAG+TGG | + | chr4_4:62946522-62946541 | Msa0693790:CDS | 35.0% | |
TTCCATTCATCATCAATCAC+CGG | - | chr4_4:62946552-62946571 | None:intergenic | 35.0% | |
!! | GATTGATGATGAATGGAATC+TGG | + | chr4_4:62946554-62946573 | Msa0693790:CDS | 35.0% |
!!! | TTTTTTTGGGTGATGTAGGT+TGG | + | chr4_4:62946681-62946700 | Msa0693790:intron | 35.0% |
!! | TTCCTTGAAAGCATTGAGAA+TGG | + | chr4_4:62946843-62946862 | Msa0693790:intron | 35.0% |
AACCATTCTCAATGCTTTCA+AGG | - | chr4_4:62946848-62946867 | None:intergenic | 35.0% | |
TAAAAGCGACAGCAAACAAT+CGG | - | chr4_4:62947039-62947058 | None:intergenic | 35.0% | |
CAGTACTTGGAAAGTAAGTA+TGG | + | chr4_4:62947094-62947113 | Msa0693790:intron | 35.0% | |
!! | TTGATGCTAACTGGTTCTAT+AGG | + | chr4_4:62947234-62947253 | Msa0693790:intron | 35.0% |
AAGACCAATGGAAAAGTTGT+CGG | + | chr4_4:62947779-62947798 | Msa0693790:CDS | 35.0% | |
CAGTATGTAAAATCAGTACC+TGG | - | chr4_4:62947864-62947883 | None:intergenic | 35.0% | |
! | ACTTTTGTTCGTTAACCAAC+GGG | - | chr4_4:62947930-62947949 | None:intergenic | 35.0% |
! | CACTTTTGTTCGTTAACCAA+CGG | - | chr4_4:62947931-62947950 | None:intergenic | 35.0% |
CAAAGCTAAGAGGAGTTAAT+AGG | - | chr4_4:62948019-62948038 | None:intergenic | 35.0% | |
! | TGATGCTTGTTGATACATAC+TGG | + | chr4_4:62948037-62948056 | Msa0693790:intron | 35.0% |
! | TTTTTACTGCTTAGACTTCG+AGG | + | chr4_4:62948061-62948080 | Msa0693790:intron | 35.0% |
! | TTTTACTGCTTAGACTTCGA+GGG | + | chr4_4:62948062-62948081 | Msa0693790:intron | 35.0% |
TCTAGTCATTTCAGAGAGTT+GGG | - | chr4_4:62948114-62948133 | None:intergenic | 35.0% | |
ATCTAGTCATTTCAGAGAGT+TGG | - | chr4_4:62948115-62948134 | None:intergenic | 35.0% | |
TGGGCTATAAATAAGAAGAG+GGG | - | chr4_4:62948153-62948172 | None:intergenic | 35.0% | |
CTGGGCTATAAATAAGAAGA+GGG | - | chr4_4:62948154-62948173 | None:intergenic | 35.0% | |
ACTGGGCTATAAATAAGAAG+AGG | - | chr4_4:62948155-62948174 | None:intergenic | 35.0% | |
ACTAGGTAAATAACTGACCA+AGG | + | chr4_4:62948228-62948247 | Msa0693790:intron | 35.0% | |
CTAGGTAAATAACTGACCAA+GGG | + | chr4_4:62948229-62948248 | Msa0693790:intron | 35.0% | |
TAGGTAAATAACTGACCAAG+GGG | + | chr4_4:62948230-62948249 | Msa0693790:intron | 35.0% | |
CCAAGATTGTCATTATAGGA+TGG | - | chr4_4:62948459-62948478 | None:intergenic | 35.0% | |
CCATCCTATAATGACAATCT+TGG | + | chr4_4:62948456-62948475 | Msa0693790:intron | 35.0% | |
GTACAAGAAGTAATAGTGTC+AGG | - | chr4_4:62948505-62948524 | None:intergenic | 35.0% | |
! | CTAGGTTGGACTTATTACAA+GGG | + | chr4_4:62948674-62948693 | Msa0693790:intron | 35.0% |
! | TAGGTTGGACTTATTACAAG+GGG | + | chr4_4:62948675-62948694 | Msa0693790:intron | 35.0% |
TACAAGGGGGAATATTGTTA+AGG | + | chr4_4:62948689-62948708 | Msa0693790:CDS | 35.0% | |
AGGCTCTCTTAAATCTTGAT+AGG | + | chr4_4:62949006-62949025 | Msa0693790:three_prime_UTR | 35.0% | |
AATCTTGATAGGTATGGGAT+TGG | + | chr4_4:62949017-62949036 | Msa0693790:three_prime_UTR | 35.0% | |
GAACAGAATAAGTGGTCTTC+CGG | + | chr4_4:62946530-62946549 | Msa0693790:CDS | 40.0% | |
!! | TTCCGGTGATTGATGATGAA+TGG | + | chr4_4:62946547-62946566 | Msa0693790:CDS | 40.0% |
!!! | GATTGTTTGCTGTCGCTTTT+AGG | + | chr4_4:62947038-62947057 | Msa0693790:intron | 40.0% |
!! | CTGACAAAATGAGTGGATTG+AGG | - | chr4_4:62947576-62947595 | None:intergenic | 40.0% |
! | CTCAATCCACTCATTTTGTC+AGG | + | chr4_4:62947574-62947593 | Msa0693790:intron | 40.0% |
AAGCTGCTTAGTAAGACCAA+TGG | + | chr4_4:62947767-62947786 | Msa0693790:CDS | 40.0% | |
! | TCATGAACAACAAGTGGACT+TGG | - | chr4_4:62947818-62947837 | None:intergenic | 40.0% |
GTGGATTCATGAACAACAAG+TGG | - | chr4_4:62947824-62947843 | None:intergenic | 40.0% | |
TGTTCATGAATCCACTAGTC+TGG | + | chr4_4:62947829-62947848 | Msa0693790:CDS | 40.0% | |
TAATTAGGGAAGAATCCCGT+TGG | + | chr4_4:62947912-62947931 | Msa0693790:intron | 40.0% | |
GCAATCTCTCAATTTCCCAA+AGG | + | chr4_4:62947968-62947987 | Msa0693790:intron | 40.0% | |
TTGTCAACGGAGAATCCTTT+GGG | - | chr4_4:62947986-62948005 | None:intergenic | 40.0% | |
AGGAGGAACTATCTTGTCAA+CGG | - | chr4_4:62947999-62948018 | None:intergenic | 40.0% | |
AGCTAAGAGGAGTTAATAGG+AGG | - | chr4_4:62948016-62948035 | None:intergenic | 40.0% | |
CAACAAGCATCAAAGCTAAG+AGG | - | chr4_4:62948029-62948048 | None:intergenic | 40.0% | |
TTTGTTAATAGTTGGGGGCT+GGG | - | chr4_4:62948201-62948220 | None:intergenic | 40.0% | |
AAATGTGATAGGTAACCCCT+TGG | - | chr4_4:62948248-62948267 | None:intergenic | 40.0% | |
AAGTAATAGTGTCAGGCATC+AGG | - | chr4_4:62948498-62948517 | None:intergenic | 40.0% | |
! | AAAATATCGTCGACTACCTG+TGG | + | chr4_4:62948543-62948562 | Msa0693790:CDS | 40.0% |
! | GCTAGGTTGGACTTATTACA+AGG | + | chr4_4:62948673-62948692 | Msa0693790:intron | 40.0% |
AGGTTGGACTTATTACAAGG+GGG | + | chr4_4:62948676-62948695 | Msa0693790:intron | 40.0% | |
AAGGGGGAATATTGTTAAGG+CGG | + | chr4_4:62948692-62948711 | Msa0693790:CDS | 40.0% | |
AATGGATGTATCAGCCCAAA+AGG | + | chr4_4:62948817-62948836 | Msa0693790:three_prime_UTR | 40.0% | |
ATGGATGTATCAGCCCAAAA+GGG | + | chr4_4:62948818-62948837 | Msa0693790:three_prime_UTR | 40.0% | |
! | ACCTTCAGAGACCTTTAAAG+TGG | + | chr4_4:62948863-62948882 | Msa0693790:three_prime_UTR | 40.0% |
! | TCCACTTTAAAGGTCTCTGA+AGG | - | chr4_4:62948867-62948886 | None:intergenic | 40.0% |
TCAACGCACAGAAACAATGT+CGG | - | chr4_4:62948942-62948961 | None:intergenic | 40.0% | |
AGGAAAGAGGATGAGAAGAT+CGG | - | chr4_4:62949161-62949180 | None:intergenic | 40.0% | |
TACTGTCCACATCAGGGAAT+AGG | - | chr4_4:62947079-62947098 | None:intergenic | 45.0% | |
! | TCCAAGTACTGTCCACATCA+GGG | - | chr4_4:62947085-62947104 | None:intergenic | 45.0% |
! | TTCCAAGTACTGTCCACATC+AGG | - | chr4_4:62947086-62947105 | None:intergenic | 45.0% |
TTCCTTAACCAGTGCCTTAG+GGG | - | chr4_4:62947387-62947406 | None:intergenic | 45.0% | |
CTTCCTTAACCAGTGCCTTA+GGG | - | chr4_4:62947388-62947407 | None:intergenic | 45.0% | |
ACTTCCTTAACCAGTGCCTT+AGG | - | chr4_4:62947389-62947408 | None:intergenic | 45.0% | |
TTTCCTTAGCAAGATCCCCA+GGG | + | chr4_4:62947487-62947506 | Msa0693790:intron | 45.0% | |
! | GTCACCGACAACTTTTCCAT+TGG | - | chr4_4:62947786-62947805 | None:intergenic | 45.0% |
! | TCATGAATCCACTAGTCTGG+AGG | + | chr4_4:62947832-62947851 | Msa0693790:CDS | 45.0% |
CTTGTCAACGGAGAATCCTT+TGG | - | chr4_4:62947987-62948006 | None:intergenic | 45.0% | |
TAAGAAGAGGGGTTGAGAGA+AGG | - | chr4_4:62948142-62948161 | None:intergenic | 45.0% | |
! | GTTTGTTAATAGTTGGGGGC+TGG | - | chr4_4:62948202-62948221 | None:intergenic | 45.0% |
TTTCCATCCTTGTCTACCAC+AGG | - | chr4_4:62948562-62948581 | None:intergenic | 45.0% | |
ATCCACCTGACTATGACTAC+AGG | - | chr4_4:62948782-62948801 | None:intergenic | 45.0% | |
TGGATGTATCAGCCCAAAAG+GGG | + | chr4_4:62948819-62948838 | Msa0693790:three_prime_UTR | 45.0% | |
CACAGAAACAATGTCGGGTA+AGG | - | chr4_4:62948936-62948955 | None:intergenic | 45.0% | |
CAACGCACAGAAACAATGTC+GGG | - | chr4_4:62948941-62948960 | None:intergenic | 45.0% | |
GGAAAGAGGATGAGAAGATC+GGG | - | chr4_4:62949160-62949179 | None:intergenic | 45.0% | |
TGCAAGCCTATTCCCTGATG+TGG | + | chr4_4:62947070-62947089 | Msa0693790:CDS | 50.0% | |
TCCCTGATGTGGACAGTACT+TGG | + | chr4_4:62947081-62947100 | Msa0693790:CDS | 50.0% | |
GTTTCCTTAGCAAGATCCCC+AGG | + | chr4_4:62947486-62947505 | Msa0693790:intron | 50.0% | |
TTCCTTAGCAAGATCCCCAG+GGG | + | chr4_4:62947488-62947507 | Msa0693790:intron | 50.0% | |
GCAGCACCTGACAAAATGAG+TGG | - | chr4_4:62947583-62947602 | None:intergenic | 50.0% | |
TTTCAGAGAGTTGGGCCTTC+CGG | - | chr4_4:62948106-62948125 | None:intergenic | 50.0% | |
TCGACTACCTGTGGTAGACA+AGG | + | chr4_4:62948552-62948571 | Msa0693790:CDS | 50.0% | |
CTACCTGTGGTAGACAAGGA+TGG | + | chr4_4:62948556-62948575 | Msa0693790:CDS | 50.0% | |
GGTAGACAAGGATGGAAAGC+TGG | + | chr4_4:62948564-62948583 | Msa0693790:CDS | 50.0% | |
GTGCTCCTGTAGTCATAGTC+AGG | + | chr4_4:62948774-62948793 | Msa0693790:three_prime_UTR | 50.0% | |
CTCCTGTAGTCATAGTCAGG+TGG | + | chr4_4:62948777-62948796 | Msa0693790:three_prime_UTR | 50.0% | |
! | TTGCCTTCAGCTCCCCTTTT+GGG | - | chr4_4:62948834-62948853 | None:intergenic | 50.0% |
TAACCAGTGCCTTAGGGGCA+CGG | - | chr4_4:62947382-62947401 | None:intergenic | 55.0% | |
!! | TGCCCCTAAGGCACTGGTTA+AGG | + | chr4_4:62947382-62947401 | Msa0693790:intron | 55.0% |
TCCTTAGCAAGATCCCCAGG+GGG | + | chr4_4:62947489-62947508 | Msa0693790:intron | 55.0% | |
GTCTGTAACCTCCCACATGC+CGG | + | chr4_4:62948084-62948103 | Msa0693790:intron | 55.0% | |
AATAGTTGGGGGCTGGGACT+GGG | - | chr4_4:62948195-62948214 | None:intergenic | 55.0% | |
TAATAGTTGGGGGCTGGGAC+TGG | - | chr4_4:62948196-62948215 | None:intergenic | 55.0% | |
! | TGTCAAAGCGCTCTGGTGAG+AGG | + | chr4_4:62948721-62948740 | Msa0693790:CDS | 55.0% |
! | GTTGCCTTCAGCTCCCCTTT+TGG | - | chr4_4:62948835-62948854 | None:intergenic | 55.0% |
AATGCTAACCGGTGCCCCCT+GGG | - | chr4_4:62947506-62947525 | None:intergenic | 60.0% | |
AAATGCTAACCGGTGCCCCC+TGG | - | chr4_4:62947507-62947526 | None:intergenic | 60.0% | |
GGCAGCATCCTCCAGACTAG+TGG | - | chr4_4:62947843-62947862 | None:intergenic | 60.0% | |
CTAGTCTGGAGGATGCTGCC+AGG | + | chr4_4:62947843-62947862 | Msa0693790:CDS | 60.0% | |
GTAACCTCCCACATGCCGGA+AGG | + | chr4_4:62948088-62948107 | Msa0693790:intron | 60.0% | |
AGTTGGGCCTTCCGGCATGT+GGG | - | chr4_4:62948098-62948117 | None:intergenic | 60.0% | |
GGGCTGGGACTGGGATAACA+GGG | - | chr4_4:62948186-62948205 | None:intergenic | 60.0% | |
! | GCTCTGCTGTCAAAGCGCTC+TGG | + | chr4_4:62948714-62948733 | Msa0693790:CDS | 60.0% |
CAGCCCAAAAGGGGAGCTGA+AGG | + | chr4_4:62948828-62948847 | Msa0693790:three_prime_UTR | 60.0% | |
ACCTGTGCACCGTGCCCCTA+AGG | + | chr4_4:62947370-62947389 | Msa0693790:intron | 65.0% | |
GCCCCCTGGGGATCTTGCTA+AGG | - | chr4_4:62947493-62947512 | None:intergenic | 65.0% | |
ATGCTAACCGGTGCCCCCTG+GGG | - | chr4_4:62947505-62947524 | None:intergenic | 65.0% | |
GAGTTGGGCCTTCCGGCATG+TGG | - | chr4_4:62948099-62948118 | None:intergenic | 65.0% | |
GGGGCTGGGACTGGGATAAC+AGG | - | chr4_4:62948187-62948206 | None:intergenic | 65.0% | |
! | GCCTTAGGGGCACGGTGCAC+AGG | - | chr4_4:62947374-62947393 | None:intergenic | 70.0% |
GCACCGTGCCCCTAAGGCAC+TGG | + | chr4_4:62947376-62947395 | Msa0693790:intron | 70.0% | |
! | GCAAGATCCCCAGGGGGCAC+CGG | + | chr4_4:62947495-62947514 | Msa0693790:intron | 70.0% |
TGGGCCTTCCGGCATGTGGG+AGG | - | chr4_4:62948095-62948114 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_4 | gene | 62946482 | 62949231 | 62946482 | ID=Msa0693790;Name=Msa0693790 |
chr4_4 | mRNA | 62946482 | 62949231 | 62946482 | ID=Msa0693790-mRNA-1;Parent=Msa0693790;Name=Msa0693790-mRNA-1;_AED=0.42;_eAED=0.42;_QI=0|0.5|0.42|0.85|1|1|7|479|135 |
chr4_4 | exon | 62946482 | 62946487 | 62946482 | ID=Msa0693790-mRNA-1:exon:17647;Parent=Msa0693790-mRNA-1 |
chr4_4 | exon | 62946519 | 62946575 | 62946519 | ID=Msa0693790-mRNA-1:exon:17648;Parent=Msa0693790-mRNA-1 |
chr4_4 | exon | 62946699 | 62946747 | 62946699 | ID=Msa0693790-mRNA-1:exon:17649;Parent=Msa0693790-mRNA-1 |
chr4_4 | exon | 62947060 | 62947106 | 62947060 | ID=Msa0693790-mRNA-1:exon:17650;Parent=Msa0693790-mRNA-1 |
chr4_4 | exon | 62947749 | 62947864 | 62947749 | ID=Msa0693790-mRNA-1:exon:17651;Parent=Msa0693790-mRNA-1 |
chr4_4 | exon | 62948528 | 62948585 | 62948528 | ID=Msa0693790-mRNA-1:exon:17652;Parent=Msa0693790-mRNA-1 |
chr4_4 | exon | 62948678 | 62949231 | 62948678 | ID=Msa0693790-mRNA-1:exon:17653;Parent=Msa0693790-mRNA-1 |
chr4_4 | CDS | 62946482 | 62946487 | 62946482 | ID=Msa0693790-mRNA-1:cds;Parent=Msa0693790-mRNA-1 |
chr4_4 | CDS | 62946519 | 62946575 | 62946519 | ID=Msa0693790-mRNA-1:cds;Parent=Msa0693790-mRNA-1 |
chr4_4 | CDS | 62946699 | 62946747 | 62946699 | ID=Msa0693790-mRNA-1:cds;Parent=Msa0693790-mRNA-1 |
chr4_4 | CDS | 62947060 | 62947106 | 62947060 | ID=Msa0693790-mRNA-1:cds;Parent=Msa0693790-mRNA-1 |
chr4_4 | CDS | 62947749 | 62947864 | 62947749 | ID=Msa0693790-mRNA-1:cds;Parent=Msa0693790-mRNA-1 |
chr4_4 | CDS | 62948528 | 62948585 | 62948528 | ID=Msa0693790-mRNA-1:cds;Parent=Msa0693790-mRNA-1 |
chr4_4 | CDS | 62948678 | 62948752 | 62948678 | ID=Msa0693790-mRNA-1:cds;Parent=Msa0693790-mRNA-1 |
chr4_4 | three_prime_UTR | 62948753 | 62949231 | 62948753 | ID=Msa0693790-mRNA-1:three_prime_utr;Parent=Msa0693790-mRNA-1 |
Gene Sequence |
Protein sequence |