Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0300990 | XP_003609733.1 | 68.966 | 377 | 60 | 5 | 1 | 373 | 1 | 324 | 1.66e-174 | 499 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0300990 | sp|Q9ZVT7|RRP4_ARATH | 45.767 | 378 | 140 | 8 | 1 | 373 | 3 | 320 | 1.60e-100 | 303 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0300990 | B7FL19 | 68.966 | 377 | 60 | 5 | 1 | 373 | 1 | 324 | 7.93e-175 | 499 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0221770 | Msa0300990 | 0.812618 | 3.871574e-51 | -8.615850e-47 |
| Msa0300990 | Msa0363790 | 0.800685 | 1.283695e-48 | -8.615850e-47 |
| Msa0300990 | Msa0455760 | 0.813195 | 2.894527e-51 | -8.615850e-47 |
| Msa0300990 | Msa1122150 | 0.802331 | 5.900908e-49 | -8.615850e-47 |
| Msa0300990 | Msa1147740 | 0.808034 | 3.776323e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0300990 | MtrunA17_Chr4g0068091 | 68.966 | 377 | 60 | 5 | 1 | 373 | 1 | 324 | 1.53e-178 | 499 |
| Msa0300990 | MtrunA17_Chr2g0326331 | 93.137 | 102 | 6 | 1 | 201 | 302 | 13 | 113 | 9.55e-64 | 199 |
| Msa0300990 | MtrunA17_Chr2g0326341 | 60.938 | 128 | 18 | 2 | 1 | 128 | 1 | 96 | 2.75e-40 | 138 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0300990 | AT1G03360.1 | 45.767 | 378 | 140 | 8 | 1 | 373 | 3 | 320 | 1.63e-101 | 303 |
Find 76 sgRNAs with CRISPR-Local
Find 261 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGTTGTTACATTCTGTTC+TGG | 0.195728 | 2_3:+56686552 | None:intergenic |
| GTTAGAGTATTGTCCACTTT+AGG | 0.290848 | 2_3:-56684892 | Msa0300990:CDS |
| AAGGCTGGTGACATTGTTAT+AGG | 0.303613 | 2_3:-56688218 | Msa0300990:CDS |
| TTGTTGTTACATTCTGTTCT+GGG | 0.330126 | 2_3:+56686553 | None:intergenic |
| TGTTGGTTGTGAAACAAATA+TGG | 0.341554 | 2_3:-56686311 | Msa0300990:CDS |
| GGTCTTACAAGAATCAAATA+TGG | 0.350810 | 2_3:-56686245 | Msa0300990:CDS |
| ATCTTCTATCATGTCATCTC+TGG | 0.353592 | 2_3:+56685041 | None:intergenic |
| CCCAATCCTTACTATTTGAT+AGG | 0.354238 | 2_3:-56688515 | Msa0300990:five_prime_UTR |
| ATGCGATCTTCATGGTTGAT+AGG | 0.364211 | 2_3:+56688359 | None:intergenic |
| CCTATCAAATAGTAAGGATT+GGG | 0.366594 | 2_3:+56688515 | None:intergenic |
| CCTTGAGTATGCGATCTTCA+TGG | 0.386160 | 2_3:+56688351 | None:intergenic |
| TGGTTCTGAGTTCTATGTTC+TGG | 0.394011 | 2_3:-56684791 | Msa0300990:CDS |
| AAACCAACATTTCCATCATA+TGG | 0.395187 | 2_3:-56685130 | Msa0300990:CDS |
| GTGTCCGTGCTTTGCGCTCA+AGG | 0.400502 | 2_3:-56688250 | Msa0300990:CDS |
| TATGGTATTGATTTAATACT+TGG | 0.403711 | 2_3:-56685102 | Msa0300990:CDS |
| GATTTAATACTTGGCTGTAA+TGG | 0.406532 | 2_3:-56685093 | Msa0300990:CDS |
| TTGGCTGTAATGGATTCATA+TGG | 0.413004 | 2_3:-56685083 | Msa0300990:CDS |
| TATAACAATGTCACCAGCCT+TGG | 0.414901 | 2_3:+56688220 | None:intergenic |
| CATATGTATTCACTTGTCTC+TGG | 0.427412 | 2_3:+56684931 | None:intergenic |
| TGGTCAGAATCGTTGGAGAT+TGG | 0.435250 | 2_3:-56688090 | Msa0300990:CDS |
| AGGCTGGTGACATTGTTATA+GGG | 0.439117 | 2_3:-56688217 | Msa0300990:CDS |
| TTAGAAATCTAAGTTATTTG+AGG | 0.458276 | 2_3:-56684706 | None:intergenic |
| GTTGTATTGCAGCTTAGTAC+TGG | 0.459996 | 2_3:-56685192 | Msa0300990:intron |
| TAGAAATCTAAGTTATTTGA+GGG | 0.461420 | 2_3:-56684705 | None:intergenic |
| TTTAACATTGGAAATCATCA+AGG | 0.462769 | 2_3:-56684863 | Msa0300990:CDS |
| GCCTATCAAATAGTAAGGAT+TGG | 0.466162 | 2_3:+56688514 | None:intergenic |
| ATAACAATGTCACCAGCCTT+GGG | 0.467609 | 2_3:+56688221 | None:intergenic |
| TTCCATCATATGGAGCAGTA+TGG | 0.468455 | 2_3:-56685120 | Msa0300990:CDS |
| TGCTACTCTCTGTGGTGTTG+TGG | 0.476983 | 2_3:-56688294 | Msa0300990:CDS |
| GAATATGCCCGATGGTCTAC+AGG | 0.480017 | 2_3:-56688024 | Msa0300990:intron |
| TTAAAGCTTGTGGATCAGAT+TGG | 0.485538 | 2_3:+56685010 | None:intergenic |
| TTTATGCACCTCTGATTCAC+AGG | 0.493016 | 2_3:-56686510 | Msa0300990:intron |
| ATCTTCTGATTCTTCTGTGA+CGG | 0.494275 | 2_3:-56688396 | Msa0300990:CDS |
| TGTTAAAATGAATCCTAAAG+TGG | 0.495226 | 2_3:+56684879 | None:intergenic |
| AGACAAGTGAATACATATGC+AGG | 0.498234 | 2_3:-56684927 | Msa0300990:CDS |
| TACCATACTGCTCCATATGA+TGG | 0.504131 | 2_3:+56685118 | None:intergenic |
| CAAAATACCTGTAGACCATC+GGG | 0.507180 | 2_3:+56688017 | None:intergenic |
| ATCTGTAGATTGTGAAATTG+TGG | 0.509350 | 2_3:-56684729 | Msa0300990:exon |
| TGCGATCTTCATGGTTGATA+GGG | 0.513417 | 2_3:+56688360 | None:intergenic |
| CTGAAAATCACGAACTACTT+CGG | 0.517598 | 2_3:+56685541 | None:intergenic |
| TGTAGGTTGGTCAGAATCGT+TGG | 0.520122 | 2_3:-56688097 | Msa0300990:intron |
| GCCTCGCCTATCAAATAGTA+AGG | 0.520355 | 2_3:+56688509 | None:intergenic |
| ATCTTCATGGTTGATAGGGA+TGG | 0.535963 | 2_3:+56688364 | None:intergenic |
| CTTGATGTACACGACATGCT+TGG | 0.536719 | 2_3:-56684811 | Msa0300990:CDS |
| CGAGTGTAACAGAGATGAGA+AGG | 0.544062 | 2_3:-56688487 | Msa0300990:exon |
| TTATTGGGAATTAAAGCTTG+TGG | 0.544595 | 2_3:+56685000 | None:intergenic |
| TCAAGGTACAAACCCAAGGC+TGG | 0.552288 | 2_3:-56688233 | Msa0300990:CDS |
| GCAAAATACCTGTAGACCAT+CGG | 0.552621 | 2_3:+56688016 | None:intergenic |
| TGTTATAGGGCGTGTCATTG+AGG | 0.553810 | 2_3:-56688204 | Msa0300990:intron |
| GCTCCATATGATGGAAATGT+TGG | 0.555749 | 2_3:+56685127 | None:intergenic |
| GTTCCAGTGCCTTCTGTAGA+CGG | 0.559019 | 2_3:+56688432 | None:intergenic |
| TGTTGTTACATTCTGTTCTG+GGG | 0.563356 | 2_3:+56686554 | None:intergenic |
| TTAACATTGGAAATCATCAA+GGG | 0.564580 | 2_3:-56684862 | Msa0300990:CDS |
| TGGCTGTAATGGATTCATAT+GGG | 0.574523 | 2_3:-56685082 | Msa0300990:CDS |
| CCATGAAGATCGCATACTCA+AGG | 0.585149 | 2_3:-56688351 | Msa0300990:CDS |
| TATTTACACGCTGTATGTGT+TGG | 0.587501 | 2_3:-56686328 | Msa0300990:CDS |
| TCCTTACTATTTGATAGGCG+AGG | 0.588054 | 2_3:-56688510 | Msa0300990:five_prime_UTR |
| GATCCGTCTACAGAAGGCAC+TGG | 0.590591 | 2_3:-56688435 | Msa0300990:CDS |
| TGTAATGGATTCATATGGGT+CGG | 0.597510 | 2_3:-56685078 | Msa0300990:CDS |
| ATGGAAGATGCTGAAACGAA+AGG | 0.601083 | 2_3:-56686292 | Msa0300990:CDS |
| GGACGAGGCTACAGAATCCA+AGG | 0.602442 | 2_3:-56686224 | Msa0300990:intron |
| GCGCTCAAGGTACAAACCCA+AGG | 0.612552 | 2_3:-56688237 | Msa0300990:CDS |
| ACATCGTACCTGTGAATCAG+AGG | 0.615042 | 2_3:+56686502 | None:intergenic |
| TCAGAAGATCCGTCTACAGA+AGG | 0.616298 | 2_3:-56688441 | Msa0300990:CDS |
| GATCGCATACTCAAGGGACA+TGG | 0.620688 | 2_3:-56688344 | Msa0300990:CDS |
| CATGGAACCGCTGATATCAA+CGG | 0.620703 | 2_3:-56688326 | Msa0300990:CDS |
| GACAAGTGAATACATATGCA+GGG | 0.623938 | 2_3:-56684926 | Msa0300990:CDS |
| CATGAAGATCGCATACTCAA+GGG | 0.634598 | 2_3:-56688350 | Msa0300990:CDS |
| CTATCAAATAGTAAGGATTG+GGG | 0.645361 | 2_3:+56688516 | None:intergenic |
| ACAAGAATCAAATATGGACG+AGG | 0.646473 | 2_3:-56686239 | Msa0300990:CDS |
| TGTACCTTGAGCGCAAAGCA+CGG | 0.650050 | 2_3:+56688246 | None:intergenic |
| TCTGCTATGAATATGCCCGA+TGG | 0.653631 | 2_3:-56688032 | Msa0300990:CDS |
| GTAACAACAAATTCACAGCA+AGG | 0.660251 | 2_3:-56686540 | Msa0300990:CDS |
| AACTTCGCCGTTGATATCAG+CGG | 0.663408 | 2_3:+56688319 | None:intergenic |
| GAAGTTGTTGCTACTCTCTG+TGG | 0.664301 | 2_3:-56688302 | Msa0300990:CDS |
| GTACATCAAGATTCGCAGAG+AGG | 0.699952 | 2_3:+56684824 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTTACTTACTTTTATTA+AGG | - | chr2_3:56687665-56687684 | Msa0300990:intron | 10.0% |
| !!! | GAAATAAGAAATTTTATACT+AGG | - | chr2_3:56685442-56685461 | Msa0300990:intron | 15.0% |
| !!! | AGAGATTTTTACTATTTTTT+CGG | + | chr2_3:56685931-56685950 | None:intergenic | 15.0% |
| !! | AAAAAATAGTAAAAATCTCT+AGG | - | chr2_3:56685931-56685950 | Msa0300990:intron | 15.0% |
| !! | AAATTAATAGATAAAGATGA+GGG | - | chr2_3:56686142-56686161 | Msa0300990:intron | 15.0% |
| !! | TCTAAATTATTAAGCTTAAT+TGG | + | chr2_3:56686339-56686358 | None:intergenic | 15.0% |
| !!! | TACTTTTATTAAGGAAATAA+CGG | - | chr2_3:56687674-56687693 | Msa0300990:intron | 15.0% |
| !! | AAACAAGAAATCTCTATAAA+GGG | + | chr2_3:56685288-56685307 | None:intergenic | 20.0% |
| !! | AAAACAAGAAATCTCTATAA+AGG | + | chr2_3:56685289-56685308 | None:intergenic | 20.0% |
| !! | ACTCAAATAATATTATGCTA+TGG | + | chr2_3:56685611-56685630 | None:intergenic | 20.0% |
| !! | ATTGATATCAACATTAACAT+CGG | + | chr2_3:56685826-56685845 | None:intergenic | 20.0% |
| !! | GAAATTAATAGATAAAGATG+AGG | - | chr2_3:56686141-56686160 | Msa0300990:intron | 20.0% |
| !!! | ATTTTAATCAGCACATAAAT+AGG | - | chr2_3:56686228-56686247 | Msa0300990:CDS | 20.0% |
| !! | AAGAAATCAAATGTATGATA+TGG | + | chr2_3:56686315-56686334 | None:intergenic | 20.0% |
| !! | GATCTTATAAGAATCAAATA+TGG | - | chr2_3:56687155-56687174 | Msa0300990:intron | 20.0% |
| !!! | TGATAATGTGTTTATAAAGT+GGG | - | chr2_3:56687463-56687482 | Msa0300990:intron | 20.0% |
| !! | ATTTCAAGCTATTAGAATTT+GGG | + | chr2_3:56687539-56687558 | None:intergenic | 20.0% |
| !! | AATTTCAAGCTATTAGAATT+TGG | + | chr2_3:56687540-56687559 | None:intergenic | 20.0% |
| !!! | TATGGTATTGATTTAATACT+TGG | - | chr2_3:56688172-56688191 | Msa0300990:intron | 20.0% |
| !!! | TTTAGGATTCATTTTAACAT+TGG | - | chr2_3:56688399-56688418 | Msa0300990:CDS | 20.0% |
| !!! | TTATGTTTTTTGTGTTGTGT+AGG | - | chr2_3:56685160-56685179 | Msa0300990:CDS | 25.0% |
| !!! | CTTGTTTTTCATTATGTAGT+CGG | - | chr2_3:56685301-56685320 | Msa0300990:intron | 25.0% |
| !!! | CAAAGTTCTTTGGTTTTATA+GGG | - | chr2_3:56685324-56685343 | Msa0300990:intron | 25.0% |
| !! | GAAATTTTATACTAGGTACT+AGG | - | chr2_3:56685449-56685468 | Msa0300990:intron | 25.0% |
| ! | TTGATATCAACATTAACATC+GGG | + | chr2_3:56685825-56685844 | None:intergenic | 25.0% |
| ! | GTTAATGTTGATATCAATGT+TGG | - | chr2_3:56685828-56685847 | Msa0300990:intron | 25.0% |
| ! | ATCAATAGTGTCATATCTTA+CGG | - | chr2_3:56686005-56686024 | Msa0300990:intron | 25.0% |
| !! | AATGTATGTTTTCATGAAGT+AGG | - | chr2_3:56686074-56686093 | Msa0300990:intron | 25.0% |
| ! | TGAAGTAGGTAAACTTATTT+AGG | - | chr2_3:56686088-56686107 | Msa0300990:intron | 25.0% |
| !!! | GTGCTGATTAAAATTTCAAA+AGG | + | chr2_3:56686222-56686241 | None:intergenic | 25.0% |
| ! | AGATCTTACAGAATCAAATA+TGG | + | chr2_3:56686614-56686633 | None:intergenic | 25.0% |
| ! | CACTTTATAAACACATTATC+AGG | + | chr2_3:56687464-56687483 | None:intergenic | 25.0% |
| !! | CTGATAATGTGTTTATAAAG+TGG | - | chr2_3:56687462-56687481 | Msa0300990:intron | 25.0% |
| ! | GATAATGTGTTTATAAAGTG+GGG | - | chr2_3:56687464-56687483 | Msa0300990:intron | 25.0% |
| ! | ATAATGTGTTTATAAAGTGG+GGG | - | chr2_3:56687465-56687484 | Msa0300990:intron | 25.0% |
| ! | TTTCAAGCTATTAGAATTTG+GGG | + | chr2_3:56687538-56687557 | None:intergenic | 25.0% |
| ! | AAGAAGTCAAAAATATGGAA+AGG | - | chr2_3:56687779-56687798 | Msa0300990:intron | 25.0% |
| ! | TAAAAGAACTATGTTTCACA+GGG | + | chr2_3:56687821-56687840 | None:intergenic | 25.0% |
| ! | ATAAAAGAACTATGTTTCAC+AGG | + | chr2_3:56687822-56687841 | None:intergenic | 25.0% |
| ! | TCTGATAGTAACTTTATGTA+TGG | - | chr2_3:56687966-56687985 | Msa0300990:intron | 25.0% |
| !! | TGTAACTTTGTACTACATTT+TGG | - | chr2_3:56687997-56688016 | Msa0300990:intron | 25.0% |
| !! | GTAACTTTGTACTACATTTT+GGG | - | chr2_3:56687998-56688017 | Msa0300990:intron | 25.0% |
| !! | TCTTTTACTTCTGTTACTAA+TGG | - | chr2_3:56688053-56688072 | Msa0300990:CDS | 25.0% |
| !! | TTTTGTCTCTTCACTAAATA+TGG | + | chr2_3:56688127-56688146 | None:intergenic | 25.0% |
| ! | ATTCCCAATAAAAATTCTGT+CGG | - | chr2_3:56688286-56688305 | Msa0300990:CDS | 25.0% |
| ! | TGTTAAAATGAATCCTAAAG+TGG | + | chr2_3:56688398-56688417 | None:intergenic | 25.0% |
| ! | TTTAACATTGGAAATCATCA+AGG | - | chr2_3:56688411-56688430 | Msa0300990:CDS | 25.0% |
| ! | TTAACATTGGAAATCATCAA+GGG | - | chr2_3:56688412-56688431 | Msa0300990:CDS | 25.0% |
| !! | AGAAAGGAGTGAGTTTTATA+GGG | + | chr2_3:56684733-56684752 | None:intergenic | 30.0% |
| CTATCAAATAGTAAGGATTG+GGG | + | chr2_3:56684761-56684780 | None:intergenic | 30.0% | |
| CCTATCAAATAGTAAGGATT+GGG | + | chr2_3:56684762-56684781 | None:intergenic | 30.0% | |
| GTCAAATCAAAAGCAGAAAA+CGG | + | chr2_3:56685120-56685139 | None:intergenic | 30.0% | |
| !!! | GCAAAGTTCTTTGGTTTTAT+AGG | - | chr2_3:56685323-56685342 | Msa0300990:intron | 30.0% |
| AATAATCCACGAAAAGTTAC+AGG | - | chr2_3:56685394-56685413 | Msa0300990:intron | 30.0% | |
| ATAATCCACGAAAAGTTACA+GGG | - | chr2_3:56685395-56685414 | Msa0300990:intron | 30.0% | |
| TTATGTTTCACAAGTGTAAG+AGG | - | chr2_3:56685475-56685494 | Msa0300990:intron | 30.0% | |
| !! | GCAAACTATTCTGTTTTTCT+TGG | + | chr2_3:56685509-56685528 | None:intergenic | 30.0% |
| ! | AAGCAGTTCATAATGAGTTT+TGG | - | chr2_3:56685697-56685716 | Msa0300990:intron | 30.0% |
| ATGTTGATATCAATGTTGGT+AGG | - | chr2_3:56685832-56685851 | Msa0300990:intron | 30.0% | |
| ACAAAAGGTTGTTCATGTAT+CGG | + | chr2_3:56685891-56685910 | None:intergenic | 30.0% | |
| !!! | ATGCTTTTTTTCTGCAATCT+GGG | - | chr2_3:56685960-56685979 | Msa0300990:intron | 30.0% |
| !! | TGTGTCAACATTTGATTTGA+TGG | - | chr2_3:56686046-56686065 | Msa0300990:intron | 30.0% |
| TGCCAATTGCAAAACAATTA+TGG | - | chr2_3:56686172-56686191 | Msa0300990:intron | 30.0% | |
| !! | GACCATAATTGTTTTGCAAT+TGG | + | chr2_3:56686177-56686196 | None:intergenic | 30.0% |
| AATCAGCACATAAATAGGTA+TGG | - | chr2_3:56686233-56686252 | Msa0300990:CDS | 30.0% | |
| AGTACTTTCAAAACTCAAGA+TGG | + | chr2_3:56686267-56686286 | None:intergenic | 30.0% | |
| TATGTCTACAATGATTGTAG+CGG | + | chr2_3:56686391-56686410 | None:intergenic | 30.0% | |
| AAATATGGAAGATGCTGAAA+CGG | + | chr2_3:56686978-56686997 | None:intergenic | 30.0% | |
| ! | TGTTGGTTGTGAAACAAATA+TGG | + | chr2_3:56686963-56686982 | None:intergenic | 30.0% |
| ! | TTGTTGTTACATTCTGTTCT+GGG | + | chr2_3:56686724-56686743 | None:intergenic | 30.0% |
| !! | TTTGTTGTTACATTCTGTTC+TGG | + | chr2_3:56686725-56686744 | None:intergenic | 30.0% |
| !! | TTTTTCAACCTTTGATTCAC+AGG | + | chr2_3:56686871-56686890 | None:intergenic | 30.0% |
| ! | TGTTGGTTGTGAAACAAATA+TGG | - | chr2_3:56686963-56686982 | Msa0300990:intron | 30.0% |
| ! | AATCGAGAAAACTTTTCTGA+AGG | - | chr2_3:56687008-56687027 | Msa0300990:intron | 30.0% |
| GGTCTTACAAGAATCAAATA+TGG | - | chr2_3:56687029-56687048 | Msa0300990:intron | 30.0% | |
| ATAAGAATCAAATATGGACG+AGG | - | chr2_3:56687161-56687180 | Msa0300990:intron | 30.0% | |
| ATCATTGTAGACATACTTGT+TGG | + | chr2_3:56687310-56687329 | None:intergenic | 30.0% | |
| AAGTATGTCTACAATGATTG+TGG | - | chr2_3:56687312-56687331 | Msa0300990:intron | 30.0% | |
| !! | AAATATGCGCTGTATTTTTG+AGG | - | chr2_3:56687603-56687622 | Msa0300990:intron | 30.0% |
| TGTGGACATGTACATAATTT+AGG | + | chr2_3:56687711-56687730 | None:intergenic | 30.0% | |
| TAAATTATGTACATGTCCAC+AGG | - | chr2_3:56687710-56687729 | Msa0300990:intron | 30.0% | |
| !!! | ATTTTTGACTTCTTGCTTGA+AGG | + | chr2_3:56687773-56687792 | None:intergenic | 30.0% |
| CAAGCAAGAAGTCAAAAATA+TGG | - | chr2_3:56687774-56687793 | Msa0300990:intron | 30.0% | |
| CTTATTCTTTCCCTCAAAAA+TGG | - | chr2_3:56687852-56687871 | Msa0300990:intron | 30.0% | |
| AGCTACAAAATTTGTATGCT+TGG | + | chr2_3:56687941-56687960 | None:intergenic | 30.0% | |
| ! | GCATACAAATTTTGTAGCTA+TGG | - | chr2_3:56687942-56687961 | Msa0300990:intron | 30.0% |
| AAACCAACATTTCCATCATA+TGG | - | chr2_3:56688144-56688163 | Msa0300990:intron | 30.0% | |
| GATTTAATACTTGGCTGTAA+TGG | - | chr2_3:56688181-56688200 | Msa0300990:intron | 30.0% | |
| TTATTGGGAATTAAAGCTTG+TGG | + | chr2_3:56688277-56688296 | None:intergenic | 30.0% | |
| ! | AGACCGACAGAATTTTTATT+GGG | + | chr2_3:56688292-56688311 | None:intergenic | 30.0% |
| ! | AAGACCGACAGAATTTTTAT+TGG | + | chr2_3:56688293-56688312 | None:intergenic | 30.0% |
| ATCTGTAGATTGTGAAATTG+TGG | - | chr2_3:56688545-56688564 | Msa0300990:five_prime_UTR | 30.0% | |
| !! | GAGAAAGGAGTGAGTTTTAT+AGG | + | chr2_3:56684734-56684753 | None:intergenic | 35.0% |
| CCCAATCCTTACTATTTGAT+AGG | - | chr2_3:56684759-56684778 | Msa0300990:CDS | 35.0% | |
| GCCTATCAAATAGTAAGGAT+TGG | + | chr2_3:56684763-56684782 | None:intergenic | 35.0% | |
| ATCTTCTGATTCTTCTGTGA+CGG | - | chr2_3:56684878-56684897 | Msa0300990:CDS | 35.0% | |
| !!! | GTTTTTTGTGTTGTGTAGGT+TGG | - | chr2_3:56685164-56685183 | Msa0300990:CDS | 35.0% |
| ! | ATTCGTAGTGAATCGATTCT+AGG | - | chr2_3:56685720-56685739 | Msa0300990:intron | 35.0% |
| ! | GATACATGAACAACCTTTTG+TGG | - | chr2_3:56685890-56685909 | Msa0300990:intron | 35.0% |
| !!! | GATGCTTTTTTTCTGCAATC+TGG | - | chr2_3:56685959-56685978 | Msa0300990:intron | 35.0% |
| AATAGTGTCATATCTTACGG+AGG | - | chr2_3:56686008-56686027 | Msa0300990:intron | 35.0% | |
| !!! | GAGTTTTGAAAGTACTCGAT+TGG | - | chr2_3:56686271-56686290 | Msa0300990:CDS | 35.0% |
| TACAGAATCAAATATGGACG+AGG | + | chr2_3:56686608-56686627 | None:intergenic | 35.0% | |
| TGTTGTTACATTCTGTTCTG+GGG | + | chr2_3:56686723-56686742 | None:intergenic | 35.0% | |
| GTAACAACAAATTCACAGCA+AGG | - | chr2_3:56686734-56686753 | Msa0300990:intron | 35.0% | |
| ACTTTGTACCTGTGAATCAA+AGG | - | chr2_3:56686860-56686879 | Msa0300990:intron | 35.0% | |
| TATTTACACGCTGTATGTGT+TGG | - | chr2_3:56686946-56686965 | Msa0300990:intron | 35.0% | |
| ACAAGAATCAAATATGGACG+AGG | - | chr2_3:56687035-56687054 | Msa0300990:intron | 35.0% | |
| ATCATCGTAGACATAGTTGT+TGG | + | chr2_3:56687241-56687260 | None:intergenic | 35.0% | |
| ! | GATTGTGTCTTTTCTTCAAC+AGG | - | chr2_3:56687258-56687277 | Msa0300990:intron | 35.0% |
| AGGAAGAAGAAGAAAACAAG+AGG | - | chr2_3:56687278-56687297 | Msa0300990:intron | 35.0% | |
| GGAAGAAGAAGAAAACAAGA+GGG | - | chr2_3:56687279-56687298 | Msa0300990:intron | 35.0% | |
| TTTCCCAATAGATCTTGGAT+AGG | + | chr2_3:56687369-56687388 | None:intergenic | 35.0% | |
| CTATTGGGAAACCTGATATT+AGG | - | chr2_3:56687378-56687397 | Msa0300990:intron | 35.0% | |
| ! | AGCTATTAGAATTTGGGGTT+GGG | + | chr2_3:56687533-56687552 | None:intergenic | 35.0% |
| ! | AAGCTATTAGAATTTGGGGT+TGG | + | chr2_3:56687534-56687553 | None:intergenic | 35.0% |
| ATTGTTCTTTCCATTGCTAG+AGG | - | chr2_3:56687557-56687576 | Msa0300990:intron | 35.0% | |
| CTGAAAATCACGAACTACTT+CGG | + | chr2_3:56687736-56687755 | None:intergenic | 35.0% | |
| TTTCCCTCAAAAATGGTACT+CGG | - | chr2_3:56687859-56687878 | Msa0300990:intron | 35.0% | |
| !! | TAACCGAGTACCATTTTTGA+GGG | + | chr2_3:56687865-56687884 | None:intergenic | 35.0% |
| !! | ATAACCGAGTACCATTTTTG+AGG | + | chr2_3:56687866-56687885 | None:intergenic | 35.0% |
| !! | TTGGCTGTAATGGATTCATA+TGG | - | chr2_3:56688191-56688210 | Msa0300990:intron | 35.0% |
| !! | TGGCTGTAATGGATTCATAT+GGG | - | chr2_3:56688192-56688211 | Msa0300990:intron | 35.0% |
| !! | TGTAATGGATTCATATGGGT+CGG | - | chr2_3:56688196-56688215 | Msa0300990:intron | 35.0% |
| ATCTTCTATCATGTCATCTC+TGG | + | chr2_3:56688236-56688255 | None:intergenic | 35.0% | |
| TTAAAGCTTGTGGATCAGAT+TGG | + | chr2_3:56688267-56688286 | None:intergenic | 35.0% | |
| CATATGTATTCACTTGTCTC+TGG | + | chr2_3:56688346-56688365 | None:intergenic | 35.0% | |
| AGACAAGTGAATACATATGC+AGG | - | chr2_3:56688347-56688366 | Msa0300990:CDS | 35.0% | |
| GACAAGTGAATACATATGCA+GGG | - | chr2_3:56688348-56688367 | Msa0300990:CDS | 35.0% | |
| !! | GTTAGAGTATTGTCCACTTT+AGG | - | chr2_3:56688382-56688401 | Msa0300990:CDS | 35.0% |
| !!! | AAGGATTGGGGTTTTGAGAA+AGG | + | chr2_3:56684749-56684768 | None:intergenic | 40.0% |
| TCCTTACTATTTGATAGGCG+AGG | - | chr2_3:56684764-56684783 | Msa0300990:CDS | 40.0% | |
| !! | ATCTTCATGGTTGATAGGGA+TGG | + | chr2_3:56684913-56684932 | None:intergenic | 40.0% |
| ! | TGCGATCTTCATGGTTGATA+GGG | + | chr2_3:56684917-56684936 | None:intergenic | 40.0% |
| ATGCGATCTTCATGGTTGAT+AGG | + | chr2_3:56684918-56684937 | None:intergenic | 40.0% | |
| CATGAAGATCGCATACTCAA+GGG | - | chr2_3:56684924-56684943 | Msa0300990:CDS | 40.0% | |
| ATAACAATGTCACCAGCCTT+GGG | + | chr2_3:56685056-56685075 | None:intergenic | 40.0% | |
| TATAACAATGTCACCAGCCT+TGG | + | chr2_3:56685057-56685076 | None:intergenic | 40.0% | |
| AAGGCTGGTGACATTGTTAT+AGG | - | chr2_3:56685056-56685075 | Msa0300990:CDS | 40.0% | |
| AGGCTGGTGACATTGTTATA+GGG | - | chr2_3:56685057-56685076 | Msa0300990:CDS | 40.0% | |
| CAAAATACCTGTAGACCATC+GGG | + | chr2_3:56685260-56685279 | None:intergenic | 40.0% | |
| GCAAAATACCTGTAGACCAT+CGG | + | chr2_3:56685261-56685280 | None:intergenic | 40.0% | |
| ATGTAGTCGGCAAAGTTCTT+TGG | - | chr2_3:56685314-56685333 | Msa0300990:intron | 40.0% | |
| ! | AAAGACCCTGTAACTTTTCG+TGG | + | chr2_3:56685403-56685422 | None:intergenic | 40.0% |
| TAGGCTGCAATTGTAGAAGA+TGG | - | chr2_3:56685739-56685758 | Msa0300990:intron | 40.0% | |
| AGGCTGCAATTGTAGAAGAT+GGG | - | chr2_3:56685740-56685759 | Msa0300990:intron | 40.0% | |
| AAATCCCCAAATATGTCCCA+AGG | + | chr2_3:56685773-56685792 | None:intergenic | 40.0% | |
| ! | TGGGACATATTTGGGGATTT+TGG | - | chr2_3:56685773-56685792 | Msa0300990:intron | 40.0% |
| ! | GGGACATATTTGGGGATTTT+GGG | - | chr2_3:56685774-56685793 | Msa0300990:intron | 40.0% |
| AAAGGTTGTTCATGTATCGG+AGG | + | chr2_3:56685888-56685907 | None:intergenic | 40.0% | |
| ATCATGTGCATCACCACAAA+AGG | + | chr2_3:56685906-56685925 | None:intergenic | 40.0% | |
| TGTCATATCTTACGGAGGTT+AGG | - | chr2_3:56686013-56686032 | Msa0300990:intron | 40.0% | |
| GTCATATCTTACGGAGGTTA+GGG | - | chr2_3:56686014-56686033 | Msa0300990:intron | 40.0% | |
| TCATATCTTACGGAGGTTAG+GGG | - | chr2_3:56686015-56686034 | Msa0300990:intron | 40.0% | |
| GCAGCAACAAGAACAACAAA+AGG | + | chr2_3:56686482-56686501 | None:intergenic | 40.0% | |
| ! | TTCAATGCTTTTCTTCGCCA+AGG | - | chr2_3:56686519-56686538 | Msa0300990:CDS | 40.0% |
| AAGGTTGCTTCCAATGAACT+CGG | + | chr2_3:56686574-56686593 | None:intergenic | 40.0% | |
| ATATTTCCAGCTGTAGGTGT+TGG | + | chr2_3:56686696-56686715 | None:intergenic | 40.0% | |
| TTTATGCACCTCTGATTCAC+AGG | - | chr2_3:56686764-56686783 | Msa0300990:intron | 40.0% | |
| GGTACGATGTAACGACATTA+AGG | - | chr2_3:56686785-56686804 | Msa0300990:intron | 40.0% | |
| TTGAAACCGTGACAAAGTGA+CGG | + | chr2_3:56686822-56686841 | None:intergenic | 40.0% | |
| ! | TTGTGCACTTCGTTCAGTTT+TGG | - | chr2_3:56686916-56686935 | Msa0300990:intron | 40.0% |
| ! | TGTGCACTTCGTTCAGTTTT+GGG | - | chr2_3:56686917-56686936 | Msa0300990:intron | 40.0% |
| ATGGAAGATGCTGAAACGAA+AGG | - | chr2_3:56686982-56687001 | Msa0300990:intron | 40.0% | |
| ! | AAGTAGCCTTACAACGAACT+CGG | - | chr2_3:56687078-56687097 | Msa0300990:intron | 40.0% |
| !! | CAGTCTTGTTATTGCAAGCT+TGG | - | chr2_3:56687335-56687354 | Msa0300990:intron | 40.0% |
| TTATTGCAAGCTTGGCATCA+AGG | - | chr2_3:56687343-56687362 | Msa0300990:intron | 40.0% | |
| AAGGCCTATCCAAGATCTAT+TGG | - | chr2_3:56687362-56687381 | Msa0300990:intron | 40.0% | |
| AGGCCTATCCAAGATCTATT+GGG | - | chr2_3:56687363-56687382 | Msa0300990:intron | 40.0% | |
| TCAGGTTTCCCAATAGATCT+TGG | + | chr2_3:56687374-56687393 | None:intergenic | 40.0% | |
| CTAGAGCATGACCTAATATC+AGG | + | chr2_3:56687392-56687411 | None:intergenic | 40.0% | |
| GTCTCACGTTGGATAAGATA+TGG | - | chr2_3:56687438-56687457 | Msa0300990:intron | 40.0% | |
| CCTTACAAAGTATGCTGGTA+AGG | + | chr2_3:56687500-56687519 | None:intergenic | 40.0% | |
| CCTTACCAGCATACTTTGTA+AGG | - | chr2_3:56687497-56687516 | Msa0300990:intron | 40.0% | |
| CTCAACCTTACAAAGTATGC+TGG | + | chr2_3:56687505-56687524 | None:intergenic | 40.0% | |
| !! | TATGCGCTGTATTTTTGAGG+AGG | - | chr2_3:56687606-56687625 | Msa0300990:intron | 40.0% |
| ! | GTTCGTGATTTTCAGCATGA+TGG | - | chr2_3:56687741-56687760 | Msa0300990:intron | 40.0% |
| CCATTTGTACTGTCTCATAC+TGG | + | chr2_3:56687898-56687917 | None:intergenic | 40.0% | |
| CCAGTATGAGACAGTACAAA+TGG | - | chr2_3:56687895-56687914 | Msa0300990:intron | 40.0% | |
| TGTATGCTTGGATCACAAAC+AGG | + | chr2_3:56687929-56687948 | None:intergenic | 40.0% | |
| GTTGTATTGCAGCTTAGTAC+TGG | - | chr2_3:56688082-56688101 | Msa0300990:CDS | 40.0% | |
| ! | GCTCCATATGATGGAAATGT+TGG | + | chr2_3:56688150-56688169 | None:intergenic | 40.0% |
| TTCCATCATATGGAGCAGTA+TGG | - | chr2_3:56688154-56688173 | Msa0300990:intron | 40.0% | |
| TACCATACTGCTCCATATGA+TGG | + | chr2_3:56688159-56688178 | None:intergenic | 40.0% | |
| !! | TGGTTCTGAGTTCTATGTTC+TGG | - | chr2_3:56688483-56688502 | Msa0300990:exon | 40.0% |
| ! | TGTTCTGGTTGCTGAAAAAG+AGG | - | chr2_3:56688498-56688517 | Msa0300990:five_prime_UTR | 40.0% |
| TTGCTGAAAAAGAGGCAGAA+AGG | - | chr2_3:56688506-56688525 | Msa0300990:five_prime_UTR | 40.0% | |
| GCCTCGCCTATCAAATAGTA+AGG | + | chr2_3:56684768-56684787 | None:intergenic | 45.0% | |
| CGAGTGTAACAGAGATGAGA+AGG | - | chr2_3:56684787-56684806 | Msa0300990:CDS | 45.0% | |
| TCAGAAGATCCGTCTACAGA+AGG | - | chr2_3:56684833-56684852 | Msa0300990:CDS | 45.0% | |
| CCTTGAGTATGCGATCTTCA+TGG | + | chr2_3:56684926-56684945 | None:intergenic | 45.0% | |
| CCATGAAGATCGCATACTCA+AGG | - | chr2_3:56684923-56684942 | Msa0300990:CDS | 45.0% | |
| CATGGAACCGCTGATATCAA+CGG | - | chr2_3:56684948-56684967 | Msa0300990:CDS | 45.0% | |
| AACTTCGCCGTTGATATCAG+CGG | + | chr2_3:56684958-56684977 | None:intergenic | 45.0% | |
| GAAGTTGTTGCTACTCTCTG+TGG | - | chr2_3:56684972-56684991 | Msa0300990:CDS | 45.0% | |
| ! | TGTTATAGGGCGTGTCATTG+AGG | - | chr2_3:56685070-56685089 | Msa0300990:CDS | 45.0% |
| !! | TGTAGGTTGGTCAGAATCGT+TGG | - | chr2_3:56685177-56685196 | Msa0300990:CDS | 45.0% |
| TGGTCAGAATCGTTGGAGAT+TGG | - | chr2_3:56685184-56685203 | Msa0300990:intron | 45.0% | |
| TCTGCTATGAATATGCCCGA+TGG | - | chr2_3:56685242-56685261 | Msa0300990:intron | 45.0% | |
| ACAGTGCCTTGGGACATATT+TGG | - | chr2_3:56685764-56685783 | Msa0300990:intron | 45.0% | |
| CAGTGCCTTGGGACATATTT+GGG | - | chr2_3:56685765-56685784 | Msa0300990:intron | 45.0% | |
| AGTGCCTTGGGACATATTTG+GGG | - | chr2_3:56685766-56685785 | Msa0300990:intron | 45.0% | |
| TTTGGGAAGCTCTTAGTTGC+AGG | - | chr2_3:56685791-56685810 | Msa0300990:intron | 45.0% | |
| TTGGGAAGCTCTTAGTTGCA+GGG | - | chr2_3:56685792-56685811 | Msa0300990:intron | 45.0% | |
| ! | TTCTGCAATCTGGGACTGAT+TGG | - | chr2_3:56685969-56685988 | Msa0300990:intron | 45.0% |
| ! | TCTGCAATCTGGGACTGATT+GGG | - | chr2_3:56685970-56685989 | Msa0300990:intron | 45.0% |
| !! | TCTGGGACTGATTGGGTTTT+TGG | - | chr2_3:56685977-56685996 | Msa0300990:intron | 45.0% |
| ! | CTGGGACTGATTGGGTTTTT+GGG | - | chr2_3:56685978-56685997 | Msa0300990:intron | 45.0% |
| ! | TGGGACTGATTGGGTTTTTG+GGG | - | chr2_3:56685979-56685998 | Msa0300990:intron | 45.0% |
| TCTTCAACAGCAGCTCAAAC+AGG | + | chr2_3:56686443-56686462 | None:intergenic | 45.0% | |
| !! | CTTTGAAGTGAGGCTGAGAT+AGG | - | chr2_3:56686542-56686561 | Msa0300990:CDS | 45.0% |
| GAGTTCATTGGAAGCAACCT+TGG | - | chr2_3:56686573-56686592 | Msa0300990:intron | 45.0% | |
| TGAAACGGAAGGAAGAATCG+AGG | + | chr2_3:56686649-56686668 | None:intergenic | 45.0% | |
| ATGGAAGATGCTGAAACGGA+AGG | + | chr2_3:56686660-56686679 | None:intergenic | 45.0% | |
| ACATCGTACCTGTGAATCAG+AGG | + | chr2_3:56686775-56686794 | None:intergenic | 45.0% | |
| ! | CTGAAACCGTCACTTTGTCA+CGG | - | chr2_3:56686813-56686832 | Msa0300990:intron | 45.0% |
| ! | GTGCACTTCGTTCAGTTTTG+GGG | - | chr2_3:56686918-56686937 | Msa0300990:intron | 45.0% |
| ! | GTAAGGCTACTTTCGAACCT+TGG | + | chr2_3:56687070-56687089 | None:intergenic | 45.0% |
| ! | AGTAGCCTTACAACGAACTC+GGG | - | chr2_3:56687079-56687098 | Msa0300990:intron | 45.0% |
| !! | TTCACCAAGGCTTTGAAGTG+AGG | + | chr2_3:56687111-56687130 | None:intergenic | 45.0% |
| AAAGCCTTGGTGAAGCAAAC+AGG | - | chr2_3:56687117-56687136 | Msa0300990:intron | 45.0% | |
| AAGCCTTGGTGAAGCAAACA+GGG | - | chr2_3:56687118-56687137 | Msa0300990:intron | 45.0% | |
| TTTCCCTGTTTGCTTCACCA+AGG | + | chr2_3:56687124-56687143 | None:intergenic | 45.0% | |
| TGAGACTCTTCAACACAAGC+AGG | + | chr2_3:56687424-56687443 | None:intergenic | 45.0% | |
| TGTGTTGAAGAGTCTCACGT+TGG | - | chr2_3:56687427-56687446 | Msa0300990:intron | 45.0% | |
| CAAAGTATGCTGGTAAGGTG+AGG | + | chr2_3:56687495-56687514 | None:intergenic | 45.0% | |
| GTACATCAAGATTCGCAGAG+AGG | + | chr2_3:56688453-56688472 | None:intergenic | 45.0% | |
| CTTGATGTACACGACATGCT+TGG | - | chr2_3:56688463-56688482 | Msa0300990:CDS | 45.0% | |
| GTTCCAGTGCCTTCTGTAGA+CGG | + | chr2_3:56684845-56684864 | None:intergenic | 50.0% | |
| GATCGCATACTCAAGGGACA+TGG | - | chr2_3:56684930-56684949 | Msa0300990:CDS | 50.0% | |
| ! | TGCTACTCTCTGTGGTGTTG+TGG | - | chr2_3:56684980-56684999 | Msa0300990:CDS | 50.0% |
| TGTACCTTGAGCGCAAAGCA+CGG | + | chr2_3:56685031-56685050 | None:intergenic | 50.0% | |
| TCAAGGTACAAACCCAAGGC+TGG | - | chr2_3:56685041-56685060 | Msa0300990:CDS | 50.0% | |
| GAATATGCCCGATGGTCTAC+AGG | - | chr2_3:56685250-56685269 | Msa0300990:intron | 50.0% | |
| AGAAGATGGGAACAGTGCCT+TGG | - | chr2_3:56685753-56685772 | Msa0300990:intron | 50.0% | |
| GAAGATGGGAACAGTGCCTT+GGG | - | chr2_3:56685754-56685773 | Msa0300990:intron | 50.0% | |
| TAGGATCGCGAGTTACCTTG+TGG | - | chr2_3:56685851-56685870 | Msa0300990:intron | 50.0% | |
| AGGATCGCGAGTTACCTTGT+GGG | - | chr2_3:56685852-56685871 | Msa0300990:intron | 50.0% | |
| GAGGATCAAGCAATCCCACA+AGG | + | chr2_3:56685869-56685888 | None:intergenic | 50.0% | |
| !! | GGGACTGATTGGGTTTTTGG+GGG | - | chr2_3:56685980-56685999 | Msa0300990:intron | 50.0% |
| !! | GGACTGATTGGGTTTTTGGG+GGG | - | chr2_3:56685981-56686000 | Msa0300990:intron | 50.0% |
| CAACAGCAGCTCAAACAGGA+GGG | + | chr2_3:56686439-56686458 | None:intergenic | 50.0% | |
| TCAACAGCAGCTCAAACAGG+AGG | + | chr2_3:56686440-56686459 | None:intergenic | 50.0% | |
| !! | TTCGCCAAGGCTTTGAAGTG+AGG | - | chr2_3:56686532-56686551 | Msa0300990:CDS | 50.0% |
| TCAGCCTCACTTCAAAGCCT+TGG | + | chr2_3:56687104-56687123 | None:intergenic | 50.0% | |
| AGTGAGGCTGAGATAGGTTG+AGG | - | chr2_3:56686548-56686567 | Msa0300990:CDS | 50.0% | |
| ! | TAGGTTGAGGCCGAGTTCAT+TGG | - | chr2_3:56686561-56686580 | Msa0300990:CDS | 50.0% |
| TCACAACCAACACCTACAGC+TGG | - | chr2_3:56686687-56686706 | Msa0300990:intron | 50.0% | |
| GGCTGCATATTTCCAGCTGT+AGG | + | chr2_3:56686702-56686721 | None:intergenic | 50.0% | |
| !! | AAGGCTTTGAAGTGAGGCTG+AGG | + | chr2_3:56686538-56686557 | None:intergenic | 50.0% |
| TCAGCCTCACTTCAAAGCCT+TGG | - | chr2_3:56687104-56687123 | Msa0300990:intron | 50.0% | |
| CTCTTCAACACAAGCAGGAC+TGG | + | chr2_3:56687419-56687438 | None:intergenic | 50.0% | |
| CTTTCCATTGCTAGAGGCGA+AGG | - | chr2_3:56687563-56687582 | Msa0300990:intron | 50.0% | |
| ! | GATCCGTCTACAGAAGGCAC+TGG | - | chr2_3:56684839-56684858 | Msa0300990:CDS | 55.0% |
| GCGCTCAAGGTACAAACCCA+AGG | - | chr2_3:56685037-56685056 | Msa0300990:CDS | 55.0% | |
| GGACGAGGCTACATGATCCA+AGG | + | chr2_3:56686593-56686612 | None:intergenic | 55.0% | |
| GGACGAGGCTACAGAATCCA+AGG | - | chr2_3:56687050-56687069 | Msa0300990:intron | 55.0% | |
| TGAGGCCCGAGTTCGTTGTA+AGG | + | chr2_3:56687087-56687106 | None:intergenic | 55.0% | |
| CTGTCCTTCGCCTCTAGCAA+TGG | + | chr2_3:56687570-56687589 | None:intergenic | 55.0% | |
| TCACGAACTACTTCGGCCTG+TGG | + | chr2_3:56687729-56687748 | None:intergenic | 55.0% | |
| GTGTCCGTGCTTTGCGCTCA+AGG | - | chr2_3:56685024-56685043 | Msa0300990:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 56684708 | 56688588 | 56684708 | ID=Msa0300990;Name=Msa0300990 |
| chr2_3 | mRNA | 56684708 | 56688588 | 56684708 | ID=Msa0300990-mRNA-1;Parent=Msa0300990;Name=Msa0300990-mRNA-1;_AED=0.17;_eAED=0.17;_QI=93|0.4|0.66|0.83|0.8|0.83|6|36|375 |
| chr2_3 | exon | 56684708 | 56685202 | 56684708 | ID=Msa0300990-mRNA-1:exon:18216;Parent=Msa0300990-mRNA-1 |
| chr2_3 | exon | 56685496 | 56685564 | 56685496 | ID=Msa0300990-mRNA-1:exon:18215;Parent=Msa0300990-mRNA-1 |
| chr2_3 | exon | 56686225 | 56686363 | 56686225 | ID=Msa0300990-mRNA-1:exon:18214;Parent=Msa0300990-mRNA-1 |
| chr2_3 | exon | 56686511 | 56686590 | 56686511 | ID=Msa0300990-mRNA-1:exon:18213;Parent=Msa0300990-mRNA-1 |
| chr2_3 | exon | 56688025 | 56688114 | 56688025 | ID=Msa0300990-mRNA-1:exon:18212;Parent=Msa0300990-mRNA-1 |
| chr2_3 | exon | 56688205 | 56688588 | 56688205 | ID=Msa0300990-mRNA-1:exon:18211;Parent=Msa0300990-mRNA-1 |
| chr2_3 | five_prime_UTR | 56688496 | 56688588 | 56688496 | ID=Msa0300990-mRNA-1:five_prime_utr;Parent=Msa0300990-mRNA-1 |
| chr2_3 | CDS | 56688205 | 56688495 | 56688205 | ID=Msa0300990-mRNA-1:cds;Parent=Msa0300990-mRNA-1 |
| chr2_3 | CDS | 56688025 | 56688114 | 56688025 | ID=Msa0300990-mRNA-1:cds;Parent=Msa0300990-mRNA-1 |
| chr2_3 | CDS | 56686511 | 56686590 | 56686511 | ID=Msa0300990-mRNA-1:cds;Parent=Msa0300990-mRNA-1 |
| chr2_3 | CDS | 56686225 | 56686363 | 56686225 | ID=Msa0300990-mRNA-1:cds;Parent=Msa0300990-mRNA-1 |
| chr2_3 | CDS | 56685496 | 56685564 | 56685496 | ID=Msa0300990-mRNA-1:cds;Parent=Msa0300990-mRNA-1 |
| chr2_3 | CDS | 56684744 | 56685202 | 56684744 | ID=Msa0300990-mRNA-1:cds;Parent=Msa0300990-mRNA-1 |
| chr2_3 | three_prime_UTR | 56684708 | 56684743 | 56684708 | ID=Msa0300990-mRNA-1:three_prime_utr;Parent=Msa0300990-mRNA-1 |
| Gene Sequence |
| Protein sequence |
