Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0321060 | XP_003594872.2 | 97.708 | 480 | 11 | 0 | 1 | 480 | 1 | 480 | 0.0 | 980 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0321060 | sp|Q84JF5|PTA14_ARATH | 69.136 | 486 | 141 | 6 | 1 | 480 | 1 | 483 | 0.0 | 689 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa0321060 | TR | SET |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001540 | Msa0321060 | 0.803957 | 2.720283e-49 | -8.615850e-47 |
| Msa0282070 | Msa0321060 | 0.869653 | 2.634547e-66 | -8.615850e-47 |
| Msa0282090 | Msa0321060 | 0.869446 | 3.078463e-66 | -8.615850e-47 |
| Msa0321060 | Msa0379450 | 0.809687 | 1.673045e-50 | -8.615850e-47 |
| Msa0321060 | Msa0419030 | 0.811045 | 8.519633e-51 | -8.615850e-47 |
| Msa0321060 | Msa0510540 | 0.805474 | 1.311648e-49 | -8.615850e-47 |
| Msa0321060 | Msa0969050 | 0.805348 | 1.394115e-49 | -8.615850e-47 |
| Msa0321060 | Msa1235140 | 0.800731 | 1.256078e-48 | -8.615850e-47 |
| Msa0321060 | Msa1375600 | 0.809213 | 2.114226e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0321060 | MtrunA17_Chr2g0296791 | 97.708 | 480 | 11 | 0 | 1 | 480 | 1 | 480 | 0.0 | 980 |
| Msa0321060 | MtrunA17_Chr4g0042701 | 24.883 | 426 | 244 | 18 | 95 | 479 | 80 | 470 | 5.12e-15 | 77.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0321060 | AT4G20130.1 | 69.136 | 486 | 141 | 6 | 1 | 480 | 1 | 483 | 0.0 | 689 |
| Msa0321060 | AT4G20130.3 | 73.151 | 365 | 97 | 1 | 116 | 480 | 1 | 364 | 0.0 | 579 |
| Msa0321060 | AT4G20130.2 | 73.151 | 365 | 97 | 1 | 116 | 480 | 1 | 364 | 0.0 | 579 |
Find 106 sgRNAs with CRISPR-Local
Find 335 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGAATTACCTAACAGTTTC+TGG | 0.135526 | 2_4:+22067532 | None:intergenic |
| CCATGGTAATTTCTTGCTTA+TGG | 0.197935 | 2_4:+22070894 | None:intergenic |
| GAAGCTGTTTCATCATCTTT+AGG | 0.257907 | 2_4:+22071824 | None:intergenic |
| TTGTCAGTCTTCAACATATC+TGG | 0.279113 | 2_4:-22067864 | Msa0321060:CDS |
| GTATATCTAGGAGGAACTTT+TGG | 0.297229 | 2_4:-22070365 | Msa0321060:intron |
| CAGTTTCTGGTCTTGCTTAG+AGG | 0.304127 | 2_4:+22067545 | None:intergenic |
| GTCCGAAGTATGCGAGCTTA+TGG | 0.311545 | 2_4:-22071124 | Msa0321060:CDS |
| AAGGAAGGGCCAAATGGTTT+TGG | 0.316532 | 2_4:-22071091 | Msa0321060:CDS |
| AACAACGAGCGTTAGAATTC+TGG | 0.322289 | 2_4:-22070300 | Msa0321060:CDS |
| TGACCAAGGGGAATTATATC+AGG | 0.327820 | 2_4:+22070862 | None:intergenic |
| TTCAAGAGTTCTCGTAGCTT+CGG | 0.331867 | 2_4:+22067017 | None:intergenic |
| AAGAAGCTTGTTTGATAAAG+TGG | 0.337875 | 2_4:+22072084 | None:intergenic |
| TTCCTTTCTTCACTTGGGAT+TGG | 0.339331 | 2_4:+22067624 | None:intergenic |
| TGAACTTGGGCAGGTTATAA+TGG | 0.358603 | 2_4:-22070941 | Msa0321060:intron |
| GCAGCCTTCCTTTCTTCACT+TGG | 0.361561 | 2_4:+22067618 | None:intergenic |
| GACCATCATTACATGTTCAT+TGG | 0.366170 | 2_4:-22066617 | None:intergenic |
| TAGAATTCTGGGAGAAGAAC+TGG | 0.366779 | 2_4:-22070288 | Msa0321060:CDS |
| TGGCGACCCACTTACTCGTT+TGG | 0.373384 | 2_4:-22071920 | Msa0321060:CDS |
| GTGAATTCAAGAGTGGAAAA+TGG | 0.376682 | 2_4:+22072125 | None:intergenic |
| TTGACTGCAAAGACAACTTT+TGG | 0.380436 | 2_4:-22070575 | Msa0321060:CDS |
| AATCTTTGTGGCAGACAGAT+TGG | 0.384792 | 2_4:-22070632 | Msa0321060:intron |
| GTTTCAACAGAAGCTTTAAC+AGG | 0.387453 | 2_4:+22071872 | None:intergenic |
| AGGCAATGCACGAATCCATT+TGG | 0.393759 | 2_4:-22067895 | Msa0321060:CDS |
| ACTTAAATATGCAGAATCCT+TGG | 0.397663 | 2_4:-22067935 | Msa0321060:intron |
| AATCCTATCTTGTAGAAATC+AGG | 0.398262 | 2_4:+22071148 | None:intergenic |
| GATCCTGATTTCTACAAGAT+AGG | 0.398743 | 2_4:-22071151 | Msa0321060:CDS |
| CCGTTACGATAATACTCTTC+AGG | 0.400533 | 2_4:+22067837 | None:intergenic |
| CTTTCTTCACTTGGGATTGG+AGG | 0.404062 | 2_4:+22067627 | None:intergenic |
| CAGAAAATTGCTAATGGAAA+AGG | 0.406976 | 2_4:-22066827 | Msa0321060:CDS |
| AAGCAAGACCAGAAACTGTT+AGG | 0.413582 | 2_4:-22067540 | Msa0321060:intron |
| ATCTTTGTGGCAGACAGATT+GGG | 0.429709 | 2_4:-22070631 | Msa0321060:intron |
| GAGGCTGAAACAAGGGAAAT+GGG | 0.430134 | 2_4:+22071846 | None:intergenic |
| GAGTTGATAATATCAAATAT+TGG | 0.430427 | 2_4:+22070838 | None:intergenic |
| CTTAAATATGCAGAATCCTT+GGG | 0.431199 | 2_4:-22067934 | Msa0321060:intron |
| TCAAGAGTTCTCGTAGCTTC+GGG | 0.432228 | 2_4:+22067018 | None:intergenic |
| ATTGCACAGAAAATTGCTAA+TGG | 0.432867 | 2_4:-22066833 | Msa0321060:CDS |
| CTTGAGGTTCTTATAAATGC+TGG | 0.434356 | 2_4:-22069792 | Msa0321060:CDS |
| CCACTCTTGAATTCACTCAA+TGG | 0.435979 | 2_4:-22072118 | Msa0321060:exon |
| GGAGGCTGAAACAAGGGAAA+TGG | 0.441003 | 2_4:+22071845 | None:intergenic |
| CAGCCTTCCTTTCTTCACTT+GGG | 0.444382 | 2_4:+22067619 | None:intergenic |
| GCTAGTACTTTCATCTGCAC+TGG | 0.452982 | 2_4:+22070530 | None:intergenic |
| TTCCCTGATATAATTCCCCT+TGG | 0.459258 | 2_4:-22070865 | Msa0321060:CDS |
| CTATTGTACAGTTAGTAGAT+TGG | 0.464691 | 2_4:+22066757 | None:intergenic |
| TTGTAGAAATCAGGATCTAC+AGG | 0.465598 | 2_4:+22071157 | None:intergenic |
| CTCCATAAGCTCGCATACTT+CGG | 0.475886 | 2_4:+22071122 | None:intergenic |
| ACTGCCCACATGAACCTTTG+AGG | 0.479039 | 2_4:+22070129 | None:intergenic |
| ACAACGAGCGTTAGAATTCT+GGG | 0.481989 | 2_4:-22070299 | Msa0321060:CDS |
| ATGTAATGATGGTCCTTTGA+CGG | 0.487202 | 2_4:+22066626 | None:intergenic |
| GAACAAAGCTTACCAGCATA+AGG | 0.490671 | 2_4:+22070030 | None:intergenic |
| AACCAATGAACATGTAATGA+TGG | 0.491236 | 2_4:+22066615 | None:intergenic |
| AACAATTTGGCTCAAACGAA+TGG | 0.492685 | 2_4:+22069844 | None:intergenic |
| CTGACAAGAAAGAATCCAAA+TGG | 0.492742 | 2_4:+22067880 | None:intergenic |
| GCATATACACCAAAACCATT+TGG | 0.494211 | 2_4:+22071082 | None:intergenic |
| GTTTGCGCCATGGATATTTG+TGG | 0.494431 | 2_4:-22071940 | Msa0321060:CDS |
| TCTCATTGTAGAAGCAAGAT+CGG | 0.504225 | 2_4:+22070330 | None:intergenic |
| TGGGATGTGATCAAATTCTC+AGG | 0.506817 | 2_4:-22067915 | Msa0321060:CDS |
| ATCAAATATTGGATGACCAA+GGG | 0.508658 | 2_4:+22070849 | None:intergenic |
| CTCCAATCCCAAGTGAAGAA+AGG | 0.512257 | 2_4:-22067626 | Msa0321060:CDS |
| TCTTTAGGAGGCTGAAACAA+GGG | 0.516914 | 2_4:+22071839 | None:intergenic |
| GGAAAAGGTTATCCTAGCAT+TGG | 0.517530 | 2_4:-22066812 | Msa0321060:CDS |
| TTACTTTCTGTACAGTTCAA+AGG | 0.517902 | 2_4:-22071962 | Msa0321060:intron |
| GTTAATCTTGTTCAGCATAG+TGG | 0.526606 | 2_4:-22070186 | Msa0321060:intron |
| CAGTTCAAAGGTTTGCGCCA+TGG | 0.527216 | 2_4:-22071950 | Msa0321060:CDS |
| TGCTGGACAACGGATAAGAA+AGG | 0.527485 | 2_4:-22069775 | Msa0321060:CDS |
| CTCATTGTAGAAGCAAGATC+GGG | 0.528009 | 2_4:+22070331 | None:intergenic |
| CTTGATAGATCTCCAATGCT+AGG | 0.544253 | 2_4:+22066800 | None:intergenic |
| TCGAACCTCTTCGCCGACCA+AGG | 0.545300 | 2_4:-22071048 | Msa0321060:CDS |
| AATATGCTGATTCCTTATGC+TGG | 0.547916 | 2_4:-22070042 | Msa0321060:intron |
| ATCGTATCTAAAACCGTCAA+AGG | 0.549387 | 2_4:-22066639 | Msa0321060:three_prime_UTR |
| CAAAGGTTCATGTGGGCAGT+AGG | 0.553144 | 2_4:-22070126 | Msa0321060:CDS |
| GCAGAAGTTCTATCGAGCAC+TGG | 0.557263 | 2_4:-22067720 | Msa0321060:intron |
| CAGCACGAACATTGCCAACA+TGG | 0.557449 | 2_4:-22067665 | Msa0321060:CDS |
| GCTGTTTCATCATCTTTAGG+AGG | 0.562065 | 2_4:+22071827 | None:intergenic |
| GCTGGACAACGGATAAGAAA+GGG | 0.563259 | 2_4:-22069774 | Msa0321060:CDS |
| AGATGATGAAACAGCTTCTG+AGG | 0.564802 | 2_4:-22071819 | Msa0321060:intron |
| CTCACCCTTGGTCGGCGAAG+AGG | 0.565363 | 2_4:+22071043 | None:intergenic |
| GACATGTTAATGCAAAGATA+CGG | 0.568057 | 2_4:-22068374 | Msa0321060:CDS |
| CTAGTACTTTCATCTGCACT+GGG | 0.569363 | 2_4:+22070531 | None:intergenic |
| TCCTGTCCTTAAAACGCCAA+TGG | 0.569618 | 2_4:+22069817 | None:intergenic |
| TTTCTGGTCTTGCTTAGAGG+TGG | 0.573797 | 2_4:+22067548 | None:intergenic |
| GTGATCCTCAAAGGTTCATG+TGG | 0.575415 | 2_4:-22070134 | Msa0321060:CDS |
| GAGAATTTGATCACATCCCA+AGG | 0.578387 | 2_4:+22067918 | None:intergenic |
| GTCTTGCTCGTGATCCTCAA+AGG | 0.578672 | 2_4:-22070143 | Msa0321060:CDS |
| ATCTTTAGGAGGCTGAAACA+AGG | 0.580488 | 2_4:+22071838 | None:intergenic |
| TATCAAATATTGGATGACCA+AGG | 0.581735 | 2_4:+22070848 | None:intergenic |
| AGTCAAATGAAAACAAGAGA+AGG | 0.583863 | 2_4:+22070592 | None:intergenic |
| AATCCCAAGTGAAGAAAGGA+AGG | 0.592614 | 2_4:-22067622 | Msa0321060:CDS |
| CCTGAAGAGTATTATCGTAA+CGG | 0.595528 | 2_4:-22067837 | Msa0321060:intron |
| ATGGTTAGCATCAATTCAAG+AGG | 0.596700 | 2_4:+22070913 | None:intergenic |
| CGAACCTCTTCGCCGACCAA+GGG | 0.606118 | 2_4:-22071047 | Msa0321060:intron |
| GACCAAGGGGAATTATATCA+GGG | 0.608421 | 2_4:+22070863 | None:intergenic |
| TGAGGCTACTCACCCTTGGT+CGG | 0.610693 | 2_4:+22071035 | None:intergenic |
| AGGCTGAAACAAGGGAAATG+GGG | 0.620587 | 2_4:+22071847 | None:intergenic |
| TCAAATATTGGATGACCAAG+GGG | 0.620822 | 2_4:+22070850 | None:intergenic |
| ACATTGCCAACATGGTCAGA+TGG | 0.621351 | 2_4:-22067657 | Msa0321060:CDS |
| TGGGTCGCCACAAATATCCA+TGG | 0.622412 | 2_4:+22071933 | None:intergenic |
| AGAATTCTGGGAGAAGAACT+GGG | 0.626608 | 2_4:-22070287 | Msa0321060:intron |
| TTCTTATAAATGCTGGACAA+CGG | 0.630290 | 2_4:-22069785 | Msa0321060:CDS |
| ACATCTCCATCTGACCATGT+TGG | 0.640415 | 2_4:+22067651 | None:intergenic |
| TACGATAATACTCTTCAGGA+AGG | 0.641879 | 2_4:+22067841 | None:intergenic |
| CCATTGAGTGAATTCAAGAG+TGG | 0.643728 | 2_4:+22072118 | None:intergenic |
| ACGGATAAGAAAGGGAGATG+AGG | 0.666436 | 2_4:-22069766 | Msa0321060:intron |
| TAGCTTACTTCTAGCTACAG+AGG | 0.670222 | 2_4:-22070511 | Msa0321060:intron |
| TGATCCTCAAAGGTTCATGT+GGG | 0.670337 | 2_4:-22070133 | Msa0321060:CDS |
| CCATAAGCAAGAAATTACCA+TGG | 0.675291 | 2_4:-22070894 | Msa0321060:CDS |
| TATCAACTCAACAAATCCAG+AGG | 0.680162 | 2_4:-22070824 | Msa0321060:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTCATCTTATAAAATTAT+AGG | + | chr2_4:22067219-22067238 | None:intergenic | 10.0% |
| !! | AAAAATTATGATAGATTTAA+CGG | + | chr2_4:22069733-22069752 | None:intergenic | 10.0% |
| !!! | GTGATTATAATTTAAAATGT+TGG | - | chr2_4:22067373-22067392 | Msa0321060:intron | 15.0% |
| !! | CATTATACAAATAATTAATG+AGG | + | chr2_4:22067749-22067768 | None:intergenic | 15.0% |
| !!! | TTATACTAAATCTTTTTGAA+AGG | - | chr2_4:22070440-22070459 | Msa0321060:intron | 15.0% |
| !! | TCTTTGTATTAAAAAATTGT+GGG | - | chr2_4:22070479-22070498 | Msa0321060:intron | 15.0% |
| !! | TATTTAAAAGTTATAAGACA+TGG | - | chr2_4:22070546-22070565 | Msa0321060:CDS | 15.0% |
| !!! | CATTTTGAAAGAATTTTAAA+AGG | + | chr2_4:22071341-22071360 | None:intergenic | 15.0% |
| !!! | AACTTAAAACTTTCTTTTTT+GGG | + | chr2_4:22071427-22071446 | None:intergenic | 15.0% |
| !! | AAAAGATGTAAAAATGGAAA+GGG | + | chr2_4:22066741-22066760 | None:intergenic | 20.0% |
| !! | AAAAAGATGTAAAAATGGAA+AGG | + | chr2_4:22066742-22066761 | None:intergenic | 20.0% |
| !! | AGAAGAAAAAGATGTAAAAA+TGG | + | chr2_4:22066747-22066766 | None:intergenic | 20.0% |
| !!! | TTTGTTTATACTACTGTTTT+TGG | - | chr2_4:22066988-22067007 | Msa0321060:intron | 20.0% |
| !!! | TTTGGTTGTTGTTTATTTAT+TGG | - | chr2_4:22067006-22067025 | Msa0321060:CDS | 20.0% |
| !!! | AAAAGAATGTTACCTTTTTT+GGG | - | chr2_4:22067078-22067097 | Msa0321060:intron | 20.0% |
| !!! | TTTTTGGATGAATTCTTTAA+AGG | - | chr2_4:22067486-22067505 | Msa0321060:intron | 20.0% |
| !!! | TTTTGGATGAATTCTTTAAA+GGG | - | chr2_4:22067487-22067506 | Msa0321060:intron | 20.0% |
| !!! | GAGTTGATAATATCAAATAT+TGG | + | chr2_4:22067928-22067947 | None:intergenic | 20.0% |
| !! | CTTAAAAAAGTAAAAAACGT+TGG | - | chr2_4:22068075-22068094 | Msa0321060:intron | 20.0% |
| !!! | CTGTTGTTATTTTATCAAAA+AGG | + | chr2_4:22068857-22068876 | None:intergenic | 20.0% |
| !!! | TTTTGATAAAATAACAACAG+AGG | - | chr2_4:22068857-22068876 | Msa0321060:intron | 20.0% |
| !!! | ATGATCAATGTTTTAAAAAC+TGG | - | chr2_4:22069299-22069318 | Msa0321060:intron | 20.0% |
| !!! | ATTATGAGATATAGTTTTAG+AGG | - | chr2_4:22069589-22069608 | Msa0321060:intron | 20.0% |
| !! | AGAAATATTAAGCATATTTG+TGG | - | chr2_4:22069811-22069830 | Msa0321060:CDS | 20.0% |
| !! | TTTCTTAATCAGTTATTACA+CGG | + | chr2_4:22070007-22070026 | None:intergenic | 20.0% |
| !! | ACACAATGAAATAATACAAA+TGG | + | chr2_4:22070296-22070315 | None:intergenic | 20.0% |
| !!! | GAATTTTGGACAATATAATT+AGG | + | chr2_4:22070330-22070349 | None:intergenic | 20.0% |
| !! | CTCTTTGTATTAAAAAATTG+TGG | - | chr2_4:22070478-22070497 | Msa0321060:intron | 20.0% |
| !!! | ACTAAATTTTAAAAACTCAG+TGG | + | chr2_4:22070798-22070817 | None:intergenic | 20.0% |
| !!! | TTTTCAAATCGGAATTATTT+AGG | - | chr2_4:22071000-22071019 | Msa0321060:intron | 20.0% |
| !! | TCGTTCTAATATTTACTTTA+TGG | - | chr2_4:22071361-22071380 | Msa0321060:intron | 20.0% |
| !! | CGTTCTAATATTTACTTTAT+GGG | - | chr2_4:22071362-22071381 | Msa0321060:intron | 20.0% |
| !!! | CAACTTAAAACTTTCTTTTT+TGG | + | chr2_4:22071428-22071447 | None:intergenic | 20.0% |
| !!! | TTAGCTTTTTTTATCGTATA+AGG | + | chr2_4:22071685-22071704 | None:intergenic | 20.0% |
| !! | GAAAAAAAATTATTCCTAGA+GGG | + | chr2_4:22071880-22071899 | None:intergenic | 20.0% |
| !! | AGAAAAAAAATTATTCCTAG+AGG | + | chr2_4:22071881-22071900 | None:intergenic | 20.0% |
| !! | TATCAGAAAAAAAAAAAGTG+TGG | - | chr2_4:22072085-22072104 | Msa0321060:CDS | 20.0% |
| ! | AACAGTAGTATAAACAAACA+AGG | + | chr2_4:22066986-22067005 | None:intergenic | 25.0% |
| !!! | CAAAAGAATGTTACCTTTTT+TGG | - | chr2_4:22067077-22067096 | Msa0321060:intron | 25.0% |
| ! | TAAAGAATTCATCCAAAAAC+TGG | + | chr2_4:22067485-22067504 | None:intergenic | 25.0% |
| ! | TGAGATATTTAGTTGTGATA+TGG | - | chr2_4:22067529-22067548 | Msa0321060:intron | 25.0% |
| ! | AATTTATTTGTTCCTCTAGT+TGG | - | chr2_4:22067581-22067600 | Msa0321060:CDS | 25.0% |
| !! | TTTTGAACTAATGACTTTAG+AGG | + | chr2_4:22067978-22067997 | None:intergenic | 25.0% |
| ! | TGTAATTGTGTAAATCTTTG+TGG | - | chr2_4:22068119-22068138 | Msa0321060:intron | 25.0% |
| ! | GTTAGCTAAATATCAATCAA+TGG | + | chr2_4:22068309-22068328 | None:intergenic | 25.0% |
| !!! | TCATGTTGATTTGTATATCT+AGG | - | chr2_4:22068386-22068405 | Msa0321060:CDS | 25.0% |
| ! | GAAGACAAAAAATTTCAACA+AGG | + | chr2_4:22068517-22068536 | None:intergenic | 25.0% |
| !! | TAGTTTTTGTTCTCAACAAA+TGG | - | chr2_4:22068553-22068572 | Msa0321060:intron | 25.0% |
| ! | TACGAAAATGATAGAATAGT+TGG | + | chr2_4:22068775-22068794 | None:intergenic | 25.0% |
| !! | ACAAAAAGTCTATCTAGTTT+GGG | + | chr2_4:22069125-22069144 | None:intergenic | 25.0% |
| ! | GAAGGTAGTAAAAATATAGA+CGG | - | chr2_4:22069149-22069168 | Msa0321060:intron | 25.0% |
| ! | AATTATGATAGATTTAACGG+AGG | + | chr2_4:22069730-22069749 | None:intergenic | 25.0% |
| ! | ATATTAAGCATATTTGTGGA+CGG | - | chr2_4:22069815-22069834 | Msa0321060:CDS | 25.0% |
| ! | AAAGCTGTTAACGTTATAAA+AGG | - | chr2_4:22069951-22069970 | Msa0321060:intron | 25.0% |
| ! | TTCTTAATCAGTTATTACAC+GGG | + | chr2_4:22070006-22070025 | None:intergenic | 25.0% |
| !! | CTCACAAAACTTGATTTTTA+AGG | + | chr2_4:22070061-22070080 | None:intergenic | 25.0% |
| ! | TGTTAGGTAGAAAAAAAAAC+TGG | + | chr2_4:22070125-22070144 | None:intergenic | 25.0% |
| ! | CTAGATCATTAAAAACTGTT+AGG | + | chr2_4:22070141-22070160 | None:intergenic | 25.0% |
| ! | TTAGAAGCTTGAAAACTAAT+TGG | - | chr2_4:22070193-22070212 | Msa0321060:intron | 25.0% |
| ! | AATGGTAATTTAAACATGCT+AGG | + | chr2_4:22070278-22070297 | None:intergenic | 25.0% |
| ! | TATTATTTCATTGTGTGACA+TGG | - | chr2_4:22070300-22070319 | Msa0321060:CDS | 25.0% |
| ! | TATAAAAAGAAAGTTACCAC+TGG | + | chr2_4:22070425-22070444 | None:intergenic | 25.0% |
| ! | CTTCTCAAAAGTTTAAAAAG+TGG | + | chr2_4:22071457-22071476 | None:intergenic | 25.0% |
| !! | TCAATGTTACAAAACTTTTG+CGG | + | chr2_4:22072032-22072051 | None:intergenic | 25.0% |
| ! | AAGAAGCTTGTTTGATAAAG+TGG | + | chr2_4:22066682-22066701 | None:intergenic | 30.0% |
| TTACTTTCTGTACAGTTCAA+AGG | - | chr2_4:22066801-22066820 | Msa0321060:CDS | 30.0% | |
| AAACAAACAAGGTGCAAAAT+GGG | + | chr2_4:22066975-22066994 | None:intergenic | 30.0% | |
| TAAACAAACAAGGTGCAAAA+TGG | + | chr2_4:22066976-22066995 | None:intergenic | 30.0% | |
| ATTGGTTGAAAGTAACAACT+AGG | - | chr2_4:22067024-22067043 | Msa0321060:CDS | 30.0% | |
| GCAATATCTTCATTCCTATA+AGG | - | chr2_4:22067459-22067478 | Msa0321060:intron | 30.0% | |
| AATCCTATCTTGTAGAAATC+AGG | + | chr2_4:22067618-22067637 | None:intergenic | 30.0% | |
| !! | AGCTTATGGAGTTGATTTTA+AGG | - | chr2_4:22067653-22067672 | Msa0321060:CDS | 30.0% |
| !! | TATGGAGTTGATTTTAAGGA+AGG | - | chr2_4:22067657-22067676 | Msa0321060:CDS | 30.0% |
| !! | ATGGAGTTGATTTTAAGGAA+GGG | - | chr2_4:22067658-22067677 | Msa0321060:CDS | 30.0% |
| ! | TTTTCCCTAATGATGAACTT+GGG | - | chr2_4:22067809-22067828 | Msa0321060:intron | 30.0% |
| ATCAAATATTGGATGACCAA+GGG | + | chr2_4:22067917-22067936 | None:intergenic | 30.0% | |
| TATCAAATATTGGATGACCA+AGG | + | chr2_4:22067918-22067937 | None:intergenic | 30.0% | |
| AGTCAAATGAAAACAAGAGA+AGG | + | chr2_4:22068174-22068193 | None:intergenic | 30.0% | |
| !! | TAAAGTGGATTCTAAAACTG+TGG | + | chr2_4:22068359-22068378 | None:intergenic | 30.0% |
| !! | TGTTGATTTGTATATCTAGG+AGG | - | chr2_4:22068389-22068408 | Msa0321060:CDS | 30.0% |
| !!! | AGCCAAATTGTTTTTTCCAT+TGG | - | chr2_4:22068930-22068949 | Msa0321060:intron | 30.0% |
| !!! | TTTTTTCCATTGGCGTTTTA+AGG | - | chr2_4:22068940-22068959 | Msa0321060:intron | 30.0% |
| TTCTTATAAATGCTGGACAA+CGG | - | chr2_4:22068978-22068997 | Msa0321060:intron | 30.0% | |
| AGTAACGTCTAATATAAGGA+AGG | + | chr2_4:22069064-22069083 | None:intergenic | 30.0% | |
| CACAAGTAACGTCTAATATA+AGG | + | chr2_4:22069068-22069087 | None:intergenic | 30.0% | |
| CACAAAAAGTCTATCTAGTT+TGG | + | chr2_4:22069126-22069145 | None:intergenic | 30.0% | |
| TGATCATTACCACATATACA+CGG | + | chr2_4:22069286-22069305 | None:intergenic | 30.0% | |
| ACACTTGATGTACTGAATAA+AGG | - | chr2_4:22069629-22069648 | Msa0321060:intron | 30.0% | |
| TATTAAGCATATTTGTGGAC+GGG | - | chr2_4:22069816-22069835 | Msa0321060:CDS | 30.0% | |
| !! | AATCAAGTTTTGTGAGAAGA+AGG | - | chr2_4:22070065-22070084 | Msa0321060:CDS | 30.0% |
| AGTCATAATCTAAGTGACAT+AGG | - | chr2_4:22070159-22070178 | Msa0321060:CDS | 30.0% | |
| ! | ACTGTCATCTGTTAGAATTT+TGG | + | chr2_4:22070344-22070363 | None:intergenic | 30.0% |
| GACATGTTAATGCAAAGATA+CGG | - | chr2_4:22070389-22070408 | Msa0321060:intron | 30.0% | |
| ! | TTAAAAAATTGTGGGCTGAT+AGG | - | chr2_4:22070487-22070506 | Msa0321060:intron | 30.0% |
| CCTATATTTAGGTAAGAATG+TGG | + | chr2_4:22070585-22070604 | None:intergenic | 30.0% | |
| CCACATTCTTACCTAAATAT+AGG | - | chr2_4:22070582-22070601 | Msa0321060:CDS | 30.0% | |
| ACTTATACATGTTTGCCATT+TGG | - | chr2_4:22070771-22070790 | Msa0321060:intron | 30.0% | |
| ACTTAAATATGCAGAATCCT+TGG | - | chr2_4:22070828-22070847 | Msa0321060:CDS | 30.0% | |
| CTTAAATATGCAGAATCCTT+GGG | - | chr2_4:22070829-22070848 | Msa0321060:CDS | 30.0% | |
| ! | GCACATTTCTCTTTTCAAAT+CGG | - | chr2_4:22070989-22071008 | Msa0321060:intron | 30.0% |
| AAACATGACACTAATTGTCA+TGG | + | chr2_4:22071316-22071335 | None:intergenic | 30.0% | |
| CAAATATAGTAATCTCGCAT+TGG | + | chr2_4:22071495-22071514 | None:intergenic | 30.0% | |
| AATGTGAATGTGATGTATAC+AGG | - | chr2_4:22071902-22071921 | Msa0321060:CDS | 30.0% | |
| ATTGCACAGAAAATTGCTAA+TGG | - | chr2_4:22071930-22071949 | Msa0321060:CDS | 30.0% | |
| CAGAAAATTGCTAATGGAAA+AGG | - | chr2_4:22071936-22071955 | Msa0321060:CDS | 30.0% | |
| CTATTGTACAGTTAGTAGAT+TGG | + | chr2_4:22072009-22072028 | None:intergenic | 30.0% | |
| GTGAATTCAAGAGTGGAAAA+TGG | + | chr2_4:22066641-22066660 | None:intergenic | 35.0% | |
| CAAAAACCAAACGAGTAAGT+GGG | + | chr2_4:22066852-22066871 | None:intergenic | 35.0% | |
| ACAAAAACCAAACGAGTAAG+TGG | + | chr2_4:22066853-22066872 | None:intergenic | 35.0% | |
| ! | GTTTCAACAGAAGCTTTAAC+AGG | + | chr2_4:22066894-22066913 | None:intergenic | 35.0% |
| ! | GAAGCTGTTTCATCATCTTT+AGG | + | chr2_4:22066942-22066961 | None:intergenic | 35.0% |
| GAAAGTAACAACTAGGACTA+AGG | - | chr2_4:22067031-22067050 | Msa0321060:intron | 35.0% | |
| ! | TGCATATGAGACCTTTTTGT+TGG | - | chr2_4:22067101-22067120 | Msa0321060:intron | 35.0% |
| ! | ATATGAGACCTTTTTGTTGG+TGG | - | chr2_4:22067104-22067123 | Msa0321060:intron | 35.0% |
| ! | TATGAGACCTTTTTGTTGGT+GGG | - | chr2_4:22067105-22067124 | Msa0321060:intron | 35.0% |
| TGTGCATATGTGACATGATA+CGG | - | chr2_4:22067176-22067195 | Msa0321060:intron | 35.0% | |
| GTAGCGAGACTTTAAATTGA+AGG | + | chr2_4:22067298-22067317 | None:intergenic | 35.0% | |
| ! | ATTCCTATAAGGCCAGTTTT+TGG | - | chr2_4:22067470-22067489 | Msa0321060:intron | 35.0% |
| TTGTAGAAATCAGGATCTAC+AGG | + | chr2_4:22067609-22067628 | None:intergenic | 35.0% | |
| GATCCTGATTTCTACAAGAT+AGG | - | chr2_4:22067612-22067631 | Msa0321060:CDS | 35.0% | |
| GCATATACACCAAAACCATT+TGG | + | chr2_4:22067684-22067703 | None:intergenic | 35.0% | |
| ATTCTGAGTAGTTGTCCATA+TGG | - | chr2_4:22067783-22067802 | Msa0321060:intron | 35.0% | |
| ! | GTTTTCCCTAATGATGAACT+TGG | - | chr2_4:22067808-22067827 | Msa0321060:intron | 35.0% |
| ATGGTTAGCATCAATTCAAG+AGG | + | chr2_4:22067853-22067872 | None:intergenic | 35.0% | |
| CCATGGTAATTTCTTGCTTA+TGG | + | chr2_4:22067872-22067891 | None:intergenic | 35.0% | |
| CCATAAGCAAGAAATTACCA+TGG | - | chr2_4:22067869-22067888 | Msa0321060:CDS | 35.0% | |
| ATATCAGGGAAAAACATCCA+TGG | + | chr2_4:22067889-22067908 | None:intergenic | 35.0% | |
| TCAAATATTGGATGACCAAG+GGG | + | chr2_4:22067916-22067935 | None:intergenic | 35.0% | |
| TATCAACTCAACAAATCCAG+AGG | - | chr2_4:22067939-22067958 | Msa0321060:intron | 35.0% | |
| ! | TTGACTGCAAAGACAACTTT+TGG | - | chr2_4:22068188-22068207 | Msa0321060:intron | 35.0% |
| ! | GACAACTTTTGGCAGTATTA+CGG | - | chr2_4:22068199-22068218 | Msa0321060:intron | 35.0% |
| ACATCAGATGTAGCTACATT+TGG | - | chr2_4:22068327-22068346 | Msa0321060:intron | 35.0% | |
| ! | GTATATCTAGGAGGAACTTT+TGG | - | chr2_4:22068398-22068417 | Msa0321060:CDS | 35.0% |
| TCTCATTGTAGAAGCAAGAT+CGG | + | chr2_4:22068436-22068455 | None:intergenic | 35.0% | |
| GTTAATCTTGTTCAGCATAG+TGG | - | chr2_4:22068577-22068596 | Msa0321060:intron | 35.0% | |
| !! | AATATGCTGATTCCTTATGC+TGG | - | chr2_4:22068721-22068740 | Msa0321060:intron | 35.0% |
| !! | TAAGCTTTGTTCACCTCAAA+TGG | - | chr2_4:22068744-22068763 | Msa0321060:intron | 35.0% |
| ATAGTTGGTTAGACCATTTG+AGG | + | chr2_4:22068760-22068779 | None:intergenic | 35.0% | |
| ! | AACAATTTGGCTCAAACGAA+TGG | + | chr2_4:22068922-22068941 | None:intergenic | 35.0% |
| CGCCAATGGAAAAAACAATT+TGG | + | chr2_4:22068935-22068954 | None:intergenic | 35.0% | |
| CTTGAGGTTCTTATAAATGC+TGG | - | chr2_4:22068971-22068990 | Msa0321060:intron | 35.0% | |
| ! | ACTAGATAGACTTTTTGTGC+AGG | - | chr2_4:22069127-22069146 | Msa0321060:intron | 35.0% |
| TTCAACGTAGGCTAGTATAA+AGG | - | chr2_4:22069191-22069210 | Msa0321060:intron | 35.0% | |
| TAGGCTAGTATAAAGGAACT+AGG | - | chr2_4:22069198-22069217 | Msa0321060:intron | 35.0% | |
| ATTTCACATCCGTGTATATG+TGG | - | chr2_4:22069274-22069293 | Msa0321060:intron | 35.0% | |
| TATATTTGTGTGCAGATGTG+GGG | + | chr2_4:22069505-22069524 | None:intergenic | 35.0% | |
| GTATATTTGTGTGCAGATGT+GGG | + | chr2_4:22069506-22069525 | None:intergenic | 35.0% | |
| AGTATATTTGTGTGCAGATG+TGG | + | chr2_4:22069507-22069526 | None:intergenic | 35.0% | |
| CATTTATTTGGTCAGATGTG+GGG | + | chr2_4:22069549-22069568 | None:intergenic | 35.0% | |
| GCATTTATTTGGTCAGATGT+GGG | + | chr2_4:22069550-22069569 | None:intergenic | 35.0% | |
| TGCATTTATTTGGTCAGATG+TGG | + | chr2_4:22069551-22069570 | None:intergenic | 35.0% | |
| ACATCTGACCAAATAAATGC+AGG | - | chr2_4:22069550-22069569 | Msa0321060:intron | 35.0% | |
| !! | CAAAAGTGCCTGCATTTATT+TGG | + | chr2_4:22069561-22069580 | None:intergenic | 35.0% |
| TTGTTGCCTAAATCCAACAT+GGG | - | chr2_4:22069910-22069929 | Msa0321060:intron | 35.0% | |
| ACTTCTCTGATATCTAACCA+TGG | - | chr2_4:22069979-22069998 | Msa0321060:intron | 35.0% | |
| CACGAGAGTGAGAATAATTA+TGG | - | chr2_4:22070029-22070048 | Msa0321060:intron | 35.0% | |
| CGACTAAACTATGAGCATTA+AGG | - | chr2_4:22070612-22070631 | Msa0321060:CDS | 35.0% | |
| AGCATTAAGGAAGTCTGTAT+TGG | - | chr2_4:22070625-22070644 | Msa0321060:intron | 35.0% | |
| AAGAAGCAACTGCACATATA+TGG | + | chr2_4:22070695-22070714 | None:intergenic | 35.0% | |
| TAAAAACTCAGTGGACCAAA+TGG | + | chr2_4:22070789-22070808 | None:intergenic | 35.0% | |
| CTGACAAGAAAGAATCCAAA+TGG | + | chr2_4:22070886-22070905 | None:intergenic | 35.0% | |
| TTGTCAGTCTTCAACATATC+TGG | - | chr2_4:22070899-22070918 | Msa0321060:CDS | 35.0% | |
| TACGATAATACTCTTCAGGA+AGG | + | chr2_4:22070925-22070944 | None:intergenic | 35.0% | |
| !! | CCTGAAGAGTATTATCGTAA+CGG | - | chr2_4:22070926-22070945 | Msa0321060:CDS | 35.0% |
| ! | AGAGTATTATCGTAACGGTA+TGG | - | chr2_4:22070931-22070950 | Msa0321060:CDS | 35.0% |
| ! | ACTGGAGATACTTTTGTTGA+TGG | - | chr2_4:22071061-22071080 | Msa0321060:CDS | 35.0% |
| CTGAATTACCTAACAGTTTC+TGG | + | chr2_4:22071234-22071253 | None:intergenic | 35.0% | |
| ! | ACTTTATGGGTTATGCTAAC+CGG | - | chr2_4:22071375-22071394 | Msa0321060:intron | 35.0% |
| TAGCATTGCCCTTACTTTAT+TGG | - | chr2_4:22071547-22071566 | Msa0321060:intron | 35.0% | |
| CTAGTCCACCAATAAAGTAA+GGG | + | chr2_4:22071558-22071577 | None:intergenic | 35.0% | |
| TCTAGTCCACCAATAAAGTA+AGG | + | chr2_4:22071559-22071578 | None:intergenic | 35.0% | |
| TGGTCATTAAACGAAAGCTA+AGG | + | chr2_4:22071714-22071733 | None:intergenic | 35.0% | |
| ! | ATCGTATCTAAAACCGTCAA+AGG | - | chr2_4:22072124-22072143 | Msa0321060:five_prime_UTR | 35.0% |
| ATGTAATGATGGTCCTTTGA+CGG | + | chr2_4:22072140-22072159 | None:intergenic | 35.0% | |
| CCATTGAGTGAATTCAAGAG+TGG | + | chr2_4:22066648-22066667 | None:intergenic | 40.0% | |
| CCACTCTTGAATTCACTCAA+TGG | - | chr2_4:22066645-22066664 | Msa0321060:three_prime_UTR | 40.0% | |
| AAGCTTCTTCTCAAAAACCC+AGG | - | chr2_4:22066693-22066712 | Msa0321060:three_prime_UTR | 40.0% | |
| AAGTGAAGTGAACTGAACCT+GGG | + | chr2_4:22066713-22066732 | None:intergenic | 40.0% | |
| ! | TCTTTAGGAGGCTGAAACAA+GGG | + | chr2_4:22066927-22066946 | None:intergenic | 40.0% |
| ! | ATCTTTAGGAGGCTGAAACA+AGG | + | chr2_4:22066928-22066947 | None:intergenic | 40.0% |
| ! | GCTGTTTCATCATCTTTAGG+AGG | + | chr2_4:22066939-22066958 | None:intergenic | 40.0% |
| AGATGATGAAACAGCTTCTG+AGG | - | chr2_4:22066944-22066963 | Msa0321060:intron | 40.0% | |
| GTCTCATATGCACCCAAAAA+AGG | + | chr2_4:22067093-22067112 | None:intergenic | 40.0% | |
| CTTTATGCCCACCAACAAAA+AGG | + | chr2_4:22067115-22067134 | None:intergenic | 40.0% | |
| !! | GCATAAAGCGAGTGTTTTAG+TGG | - | chr2_4:22067127-22067146 | Msa0321060:intron | 40.0% |
| ! | TAGTGGTCTTACTCTTAAGC+CGG | - | chr2_4:22067144-22067163 | Msa0321060:intron | 40.0% |
| !! | CATCCAAAAACTGGCCTTAT+AGG | + | chr2_4:22067476-22067495 | None:intergenic | 40.0% |
| !! | GATTTTAAGGAAGGGCCAAA+TGG | - | chr2_4:22067666-22067685 | Msa0321060:CDS | 40.0% |
| CATTAGGGAAAACAGCCATA+TGG | + | chr2_4:22067801-22067820 | None:intergenic | 40.0% | |
| TGAACTTGGGCAGGTTATAA+TGG | - | chr2_4:22067822-22067841 | Msa0321060:intron | 40.0% | |
| TTCCCTGATATAATTCCCCT+TGG | - | chr2_4:22067898-22067917 | Msa0321060:CDS | 40.0% | |
| GACCAAGGGGAATTATATCA+GGG | + | chr2_4:22067903-22067922 | None:intergenic | 40.0% | |
| TGACCAAGGGGAATTATATC+AGG | + | chr2_4:22067904-22067923 | None:intergenic | 40.0% | |
| AGGATGATTGCAATTACCTC+TGG | + | chr2_4:22067958-22067977 | None:intergenic | 40.0% | |
| AATCTTTGTGGCAGACAGAT+TGG | - | chr2_4:22068131-22068150 | Msa0321060:intron | 40.0% | |
| ATCTTTGTGGCAGACAGATT+GGG | - | chr2_4:22068132-22068151 | Msa0321060:intron | 40.0% | |
| CTAGTACTTTCATCTGCACT+GGG | + | chr2_4:22068235-22068254 | None:intergenic | 40.0% | |
| ! | TAGCTTACTTCTAGCTACAG+AGG | - | chr2_4:22068252-22068271 | Msa0321060:intron | 40.0% |
| CAACATGAGATGTCGTAAAG+TGG | + | chr2_4:22068374-22068393 | None:intergenic | 40.0% | |
| CTCATTGTAGAAGCAAGATC+GGG | + | chr2_4:22068435-22068454 | None:intergenic | 40.0% | |
| AACAACGAGCGTTAGAATTC+TGG | - | chr2_4:22068463-22068482 | Msa0321060:intron | 40.0% | |
| ACAACGAGCGTTAGAATTCT+GGG | - | chr2_4:22068464-22068483 | Msa0321060:intron | 40.0% | |
| ! | TAGAATTCTGGGAGAAGAAC+TGG | - | chr2_4:22068475-22068494 | Msa0321060:intron | 40.0% |
| ! | AGAATTCTGGGAGAAGAACT+GGG | - | chr2_4:22068476-22068495 | Msa0321060:intron | 40.0% |
| ! | GCAAGACGTTTTACTTTGAG+CGG | + | chr2_4:22068607-22068626 | None:intergenic | 40.0% |
| TGATCCTCAAAGGTTCATGT+GGG | - | chr2_4:22068630-22068649 | Msa0321060:intron | 40.0% | |
| GAACAAAGCTTACCAGCATA+AGG | + | chr2_4:22068736-22068755 | None:intergenic | 40.0% | |
| TTCGTACTCATGCATAGTAG+CGG | - | chr2_4:22068789-22068808 | Msa0321060:intron | 40.0% | |
| !! | TTTTAAGGACAGGATGCTTG+AGG | - | chr2_4:22068955-22068974 | Msa0321060:intron | 40.0% |
| ! | GATAGACTTTTTGTGCAGGA+AGG | - | chr2_4:22069131-22069150 | Msa0321060:intron | 40.0% |
| ! | GCATGTCAGATTTTCAACGT+AGG | - | chr2_4:22069179-22069198 | Msa0321060:intron | 40.0% |
| ATAGCCATAGTGAATACGAG+AGG | + | chr2_4:22069226-22069245 | None:intergenic | 40.0% | |
| ! | CTTTAGGAAGATTGCATGCT+TGG | + | chr2_4:22069446-22069465 | None:intergenic | 40.0% |
| !!! | GCTCGGTGTTTCTTTTCTTT+AGG | + | chr2_4:22069462-22069481 | None:intergenic | 40.0% |
| TGCAACACACAAGAAACAGA+AGG | - | chr2_4:22069872-22069891 | Msa0321060:intron | 40.0% | |
| GCAACACACAAGAAACAGAA+GGG | - | chr2_4:22069873-22069892 | Msa0321060:intron | 40.0% | |
| TGTTGGATTTAGGCAACAAC+AGG | + | chr2_4:22069909-22069928 | None:intergenic | 40.0% | |
| GTTGTTGCCTAAATCCAACA+TGG | - | chr2_4:22069909-22069928 | Msa0321060:intron | 40.0% | |
| !! | CAAGTTTTGTGAGAAGAAGG+TGG | - | chr2_4:22070068-22070087 | Msa0321060:CDS | 40.0% |
| TACAGGACACAATATCCAAC+TGG | - | chr2_4:22070511-22070530 | Msa0321060:intron | 40.0% | |
| ACAGGACACAATATCCAACT+GGG | - | chr2_4:22070512-22070531 | Msa0321060:CDS | 40.0% | |
| ATATTTCAGACATCCCCAGT+TGG | + | chr2_4:22070529-22070548 | None:intergenic | 40.0% | |
| GTCGATGAGGACCTATATTT+AGG | + | chr2_4:22070596-22070615 | None:intergenic | 40.0% | |
| TGCTCATAGTTTAGTCGATG+AGG | + | chr2_4:22070609-22070628 | None:intergenic | 40.0% | |
| GAGAATTTGATCACATCCCA+AGG | + | chr2_4:22070848-22070867 | None:intergenic | 40.0% | |
| TGGGATGTGATCAAATTCTC+AGG | - | chr2_4:22070848-22070867 | Msa0321060:CDS | 40.0% | |
| CCGTTACGATAATACTCTTC+AGG | + | chr2_4:22070929-22070948 | None:intergenic | 40.0% | |
| TTCCTTTCTTCACTTGGGAT+TGG | + | chr2_4:22071142-22071161 | None:intergenic | 40.0% | |
| AATCCCAAGTGAAGAAAGGA+AGG | - | chr2_4:22071141-22071160 | Msa0321060:CDS | 40.0% | |
| AAGCAAGACCAGAAACTGTT+AGG | - | chr2_4:22071223-22071242 | Msa0321060:intron | 40.0% | |
| TTCCTTAACGATTGCCCTAA+GGG | + | chr2_4:22071403-22071422 | None:intergenic | 40.0% | |
| TTTCCTTAACGATTGCCCTA+AGG | + | chr2_4:22071404-22071423 | None:intergenic | 40.0% | |
| CATTGCCCTTACTTTATTGG+TGG | - | chr2_4:22071550-22071569 | Msa0321060:intron | 40.0% | |
| CATGAATCGCCTGAAGTAAA+CGG | - | chr2_4:22071581-22071600 | Msa0321060:intron | 40.0% | |
| ATGAATCGCCTGAAGTAAAC+GGG | - | chr2_4:22071582-22071601 | Msa0321060:intron | 40.0% | |
| TTCAAGAGTTCTCGTAGCTT+CGG | + | chr2_4:22071749-22071768 | None:intergenic | 40.0% | |
| CATTAGCATCTTAACCCTCT+AGG | - | chr2_4:22071863-22071882 | Msa0321060:CDS | 40.0% | |
| GGAAAAGGTTATCCTAGCAT+TGG | - | chr2_4:22071951-22071970 | Msa0321060:intron | 40.0% | |
| CTTGATAGATCTCCAATGCT+AGG | + | chr2_4:22071966-22071985 | None:intergenic | 40.0% | |
| GAAGTGAAGTGAACTGAACC+TGG | + | chr2_4:22066714-22066733 | None:intergenic | 45.0% | |
| GTTTGCGCCATGGATATTTG+TGG | - | chr2_4:22066823-22066842 | Msa0321060:CDS | 45.0% | |
| AGGCTGAAACAAGGGAAATG+GGG | + | chr2_4:22066919-22066938 | None:intergenic | 45.0% | |
| GAGGCTGAAACAAGGGAAAT+GGG | + | chr2_4:22066920-22066939 | None:intergenic | 45.0% | |
| GTCACATATGCACACCAACA+AGG | + | chr2_4:22067170-22067189 | None:intergenic | 45.0% | |
| CTCCATAAGCTCGCATACTT+CGG | + | chr2_4:22067644-22067663 | None:intergenic | 45.0% | |
| ! | AAGGAAGGGCCAAATGGTTT+TGG | - | chr2_4:22067672-22067691 | Msa0321060:CDS | 45.0% |
| TTAATGAGGCTACTCACCCT+TGG | + | chr2_4:22067735-22067754 | None:intergenic | 45.0% | |
| CCTGCCCAAGTTCATCATTA+GGG | + | chr2_4:22067816-22067835 | None:intergenic | 45.0% | |
| ACCTGCCCAAGTTCATCATT+AGG | + | chr2_4:22067817-22067836 | None:intergenic | 45.0% | |
| GCTAGTACTTTCATCTGCAC+TGG | + | chr2_4:22068236-22068255 | None:intergenic | 45.0% | |
| GTGATCCTCAAAGGTTCATG+TGG | - | chr2_4:22068629-22068648 | Msa0321060:intron | 45.0% | |
| !!! | TCCATTGGCGTTTTAAGGAC+AGG | - | chr2_4:22068945-22068964 | Msa0321060:intron | 45.0% |
| TCCTGTCCTTAAAACGCCAA+TGG | + | chr2_4:22068949-22068968 | None:intergenic | 45.0% | |
| TGCTGGACAACGGATAAGAA+AGG | - | chr2_4:22068988-22069007 | Msa0321060:intron | 45.0% | |
| GCTGGACAACGGATAAGAAA+GGG | - | chr2_4:22068989-22069008 | Msa0321060:intron | 45.0% | |
| ACGGATAAGAAAGGGAGATG+AGG | - | chr2_4:22068997-22069016 | Msa0321060:intron | 45.0% | |
| TAGGAAGATTGCATGCTTGG+TGG | + | chr2_4:22069443-22069462 | None:intergenic | 45.0% | |
| AGATGTGGGGTTAAAGTGGT+AGG | + | chr2_4:22069492-22069511 | None:intergenic | 45.0% | |
| !!! | AGTTTTAGAGGATGTGCTGC+TGG | - | chr2_4:22069601-22069620 | Msa0321060:intron | 45.0% |
| ACATTGAAGCTAATCGTCGC+TGG | - | chr2_4:22069687-22069706 | Msa0321060:intron | 45.0% | |
| ! | GGAGAAGTATGAGAACAGGA+AGG | - | chr2_4:22069837-22069856 | Msa0321060:CDS | 45.0% |
| AGTATGAGAACAGGAAGGTG+TGG | - | chr2_4:22069842-22069861 | Msa0321060:CDS | 45.0% | |
| CACTAGCCCATGTTGGATTT+AGG | + | chr2_4:22069919-22069938 | None:intergenic | 45.0% | |
| ACTGTTACACTAGCCCATGT+TGG | + | chr2_4:22069926-22069945 | None:intergenic | 45.0% | |
| TCAGTTATTACACGGGTCCA+TGG | + | chr2_4:22069999-22070018 | None:intergenic | 45.0% | |
| TTGTGAGAAGAAGGTGGAAC+CGG | - | chr2_4:22070074-22070093 | Msa0321060:CDS | 45.0% | |
| ! | ATACGGATTTTCATCGCCAG+TGG | - | chr2_4:22070406-22070425 | Msa0321060:intron | 45.0% |
| ! | ATTGTGGGCTGATAGGATAC+AGG | - | chr2_4:22070494-22070513 | Msa0321060:intron | 45.0% |
| CAGGACACAATATCCAACTG+GGG | - | chr2_4:22070513-22070532 | Msa0321060:CDS | 45.0% | |
| AGGCAATGCACGAATCCATT+TGG | - | chr2_4:22070868-22070887 | Msa0321060:CDS | 45.0% | |
| ACATTGCCAACATGGTCAGA+TGG | - | chr2_4:22071106-22071125 | Msa0321060:CDS | 45.0% | |
| ACATCTCCATCTGACCATGT+TGG | + | chr2_4:22071115-22071134 | None:intergenic | 45.0% | |
| CTTTCTTCACTTGGGATTGG+AGG | + | chr2_4:22071139-22071158 | None:intergenic | 45.0% | |
| CTCCAATCCCAAGTGAAGAA+AGG | - | chr2_4:22071137-22071156 | Msa0321060:CDS | 45.0% | |
| CAGCCTTCCTTTCTTCACTT+GGG | + | chr2_4:22071147-22071166 | None:intergenic | 45.0% | |
| !! | TTTCTGGTCTTGCTTAGAGG+TGG | + | chr2_4:22071218-22071237 | None:intergenic | 45.0% |
| !! | CAGTTTCTGGTCTTGCTTAG+AGG | + | chr2_4:22071221-22071240 | None:intergenic | 45.0% |
| TTCCTTAACCATTTGCCCTG+AGG | - | chr2_4:22071516-22071535 | Msa0321060:intron | 45.0% | |
| TCCTTAACCATTTGCCCTGA+GGG | - | chr2_4:22071517-22071536 | Msa0321060:intron | 45.0% | |
| AATGCTAACCAATGCCCTCA+GGG | + | chr2_4:22071534-22071553 | None:intergenic | 45.0% | |
| TCAAGAGTTCTCGTAGCTTC+GGG | + | chr2_4:22071748-22071767 | None:intergenic | 45.0% | |
| !! | ATAAACAAAATAATAAATAT+AGG | - | chr2_4:22069403-22069422 | Msa0321060:intron | 5.0% |
| !! | TAAACAAAATAATAAATATA+GGG | - | chr2_4:22069404-22069423 | Msa0321060:intron | 5.0% |
| CAGTTCAAAGGTTTGCGCCA+TGG | - | chr2_4:22066813-22066832 | Msa0321060:CDS | 50.0% | |
| TGGGTCGCCACAAATATCCA+TGG | + | chr2_4:22066833-22066852 | None:intergenic | 50.0% | |
| GGAGGCTGAAACAAGGGAAA+TGG | + | chr2_4:22066921-22066940 | None:intergenic | 50.0% | |
| ! | TACTCTTAAGCCGGCCTTGT+TGG | - | chr2_4:22067153-22067172 | Msa0321060:intron | 50.0% |
| CATATGCACACCAACAAGGC+CGG | + | chr2_4:22067166-22067185 | None:intergenic | 50.0% | |
| GATCTACAGGCTCCAACTAG+AGG | + | chr2_4:22067596-22067615 | None:intergenic | 50.0% | |
| GTCCGAAGTATGCGAGCTTA+TGG | - | chr2_4:22067639-22067658 | Msa0321060:CDS | 50.0% | |
| CCCTAATGATGAACTTGGGC+AGG | - | chr2_4:22067813-22067832 | Msa0321060:intron | 50.0% | |
| GTCTTGCTCGTGATCCTCAA+AGG | - | chr2_4:22068620-22068639 | Msa0321060:intron | 50.0% | |
| ACTGCCCACATGAACCTTTG+AGG | + | chr2_4:22068637-22068656 | None:intergenic | 50.0% | |
| CAAAGGTTCATGTGGGCAGT+AGG | - | chr2_4:22068637-22068656 | Msa0321060:intron | 50.0% | |
| GGAGCCTCTCGTATTCACTA+TGG | - | chr2_4:22069219-22069238 | Msa0321060:intron | 50.0% | |
| AACTGGACCTGAGACCTAAC+CGG | - | chr2_4:22069316-22069335 | Msa0321060:intron | 50.0% | |
| CCAATGAAACCATGACCCGA+AGG | + | chr2_4:22069347-22069366 | None:intergenic | 50.0% | |
| CCTTCGGGTCATGGTTTCAT+TGG | - | chr2_4:22069344-22069363 | Msa0321060:intron | 50.0% | |
| TGGTTCAACCAGTGCGATCA+CGG | - | chr2_4:22069364-22069383 | Msa0321060:intron | 50.0% | |
| GTGCAGATGTGGGGTTAAAG+TGG | + | chr2_4:22069496-22069515 | None:intergenic | 50.0% | |
| TGTGGGGTACATATGCTGGA+AGG | + | chr2_4:22069533-22069552 | None:intergenic | 50.0% | |
| CAGATGTGGGGTACATATGC+TGG | + | chr2_4:22069537-22069556 | None:intergenic | 50.0% | |
| ! | GACGGGAGAAGTATGAGAAC+AGG | - | chr2_4:22069833-22069852 | Msa0321060:CDS | 50.0% |
| ! | ATGAGAACAGGAAGGTGTGG+AGG | - | chr2_4:22069845-22069864 | Msa0321060:CDS | 50.0% |
| ! | AACCGGTTCTGCAGTTCATC+TGG | - | chr2_4:22070091-22070110 | Msa0321060:CDS | 50.0% |
| CACCAGATGAACTGCAGAAC+CGG | + | chr2_4:22070096-22070115 | None:intergenic | 50.0% | |
| GCAGAAGTTCTATCGAGCAC+TGG | - | chr2_4:22071043-22071062 | Msa0321060:intron | 50.0% | |
| CAGCACGAACATTGCCAACA+TGG | - | chr2_4:22071098-22071117 | Msa0321060:CDS | 50.0% | |
| GCAGCCTTCCTTTCTTCACT+TGG | + | chr2_4:22071148-22071167 | None:intergenic | 50.0% | |
| TTATGCTAACCGGTGCCCTT+AGG | - | chr2_4:22071385-22071404 | Msa0321060:intron | 50.0% | |
| TATGCTAACCGGTGCCCTTA+GGG | - | chr2_4:22071386-22071405 | Msa0321060:intron | 50.0% | |
| TGCCCTTAGGGCAATCGTTA+AGG | - | chr2_4:22071398-22071417 | Msa0321060:intron | 50.0% | |
| CAATGCTAACCAATGCCCTC+AGG | + | chr2_4:22071535-22071554 | None:intergenic | 50.0% | |
| AACAAGGGCCCGTTTACTTC+AGG | + | chr2_4:22071593-22071612 | None:intergenic | 50.0% | |
| AGCTTCGGGTGATGAATCTG+TGG | + | chr2_4:22071734-22071753 | None:intergenic | 50.0% | |
| TGGCGACCCACTTACTCGTT+TGG | - | chr2_4:22066843-22066862 | Msa0321060:intron | 55.0% | |
| TGAGGCTACTCACCCTTGGT+CGG | + | chr2_4:22067731-22067750 | None:intergenic | 55.0% | |
| !!! | GGAGGAACTTTTGGAGCTGC+AGG | - | chr2_4:22068407-22068426 | Msa0321060:CDS | 55.0% |
| ! | TGCATGCTTGGTGGCAACTC+TGG | + | chr2_4:22069434-22069453 | None:intergenic | 55.0% |
| AAGTGGTAGGCTTGTGCGCT+CGG | + | chr2_4:22069479-22069498 | None:intergenic | 55.0% | |
| ! | AACGATTGCCCTAAGGGCAC+CGG | + | chr2_4:22071397-22071416 | None:intergenic | 55.0% |
| GCCCTCAGGGCAAATGGTTA+AGG | + | chr2_4:22071521-22071540 | None:intergenic | 55.0% | |
| ! | ACCATTTGCCCTGAGGGCAT+TGG | - | chr2_4:22071523-22071542 | Msa0321060:intron | 55.0% |
| ACCAATGCCCTCAGGGCAAA+TGG | + | chr2_4:22071527-22071546 | None:intergenic | 55.0% | |
| TCGAACCTCTTCGCCGACCA+AGG | - | chr2_4:22067715-22067734 | Msa0321060:CDS | 60.0% | |
| CGAACCTCTTCGCCGACCAA+GGG | - | chr2_4:22067716-22067735 | Msa0321060:CDS | 60.0% | |
| GACCTAACCGGCGAGACCTT+CGG | - | chr2_4:22069328-22069347 | Msa0321060:intron | 60.0% | |
| ACCTAACCGGCGAGACCTTC+GGG | - | chr2_4:22069329-22069348 | Msa0321060:intron | 60.0% | |
| CAGCTCAACCGTGATCGCAC+TGG | + | chr2_4:22069375-22069394 | None:intergenic | 60.0% | |
| CAGTGCGATCACGGTTGAGC+TGG | - | chr2_4:22069373-22069392 | Msa0321060:intron | 60.0% | |
| CTCACCCTTGGTCGGCGAAG+AGG | + | chr2_4:22067723-22067742 | None:intergenic | 65.0% | |
| ! | GGTCTCGCCGGTTAGGTCTC+AGG | + | chr2_4:22069326-22069345 | None:intergenic | 65.0% |
| ! | ACCCGAAGGTCTCGCCGGTT+AGG | + | chr2_4:22069333-22069352 | None:intergenic | 65.0% |
| CCATGACCCGAAGGTCTCGC+CGG | + | chr2_4:22069338-22069357 | None:intergenic | 65.0% | |
| CCGGCGAGACCTTCGGGTCA+TGG | - | chr2_4:22069335-22069354 | Msa0321060:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 22066620 | 22072165 | 22066620 | ID=Msa0321060;Name=Msa0321060 |
| chr2_4 | mRNA | 22066620 | 22072165 | 22066620 | ID=Msa0321060-mRNA-1;Parent=Msa0321060;Name=Msa0321060-mRNA-1;_AED=0.10;_eAED=0.10;_QI=44|1|1|1|1|1|13|163|480 |
| chr2_4 | exon | 22066620 | 22066861 | 22066620 | ID=Msa0321060-mRNA-1:exon:8081;Parent=Msa0321060-mRNA-1 |
| chr2_4 | exon | 22067006 | 22067048 | 22067006 | ID=Msa0321060-mRNA-1:exon:8080;Parent=Msa0321060-mRNA-1 |
| chr2_4 | exon | 22067541 | 22067738 | 22067541 | ID=Msa0321060-mRNA-1:exon:8079;Parent=Msa0321060-mRNA-1 |
| chr2_4 | exon | 22067838 | 22067943 | 22067838 | ID=Msa0321060-mRNA-1:exon:8078;Parent=Msa0321060-mRNA-1 |
| chr2_4 | exon | 22068358 | 22068429 | 22068358 | ID=Msa0321060-mRNA-1:exon:8077;Parent=Msa0321060-mRNA-1 |
| chr2_4 | exon | 22069767 | 22069876 | 22069767 | ID=Msa0321060-mRNA-1:exon:8076;Parent=Msa0321060-mRNA-1 |
| chr2_4 | exon | 22070043 | 22070193 | 22070043 | ID=Msa0321060-mRNA-1:exon:8075;Parent=Msa0321060-mRNA-1 |
| chr2_4 | exon | 22070288 | 22070377 | 22070288 | ID=Msa0321060-mRNA-1:exon:8074;Parent=Msa0321060-mRNA-1 |
| chr2_4 | exon | 22070512 | 22070640 | 22070512 | ID=Msa0321060-mRNA-1:exon:8073;Parent=Msa0321060-mRNA-1 |
| chr2_4 | exon | 22070825 | 22070950 | 22070825 | ID=Msa0321060-mRNA-1:exon:8072;Parent=Msa0321060-mRNA-1 |
| chr2_4 | exon | 22071048 | 22071185 | 22071048 | ID=Msa0321060-mRNA-1:exon:8071;Parent=Msa0321060-mRNA-1 |
| chr2_4 | exon | 22071820 | 22071969 | 22071820 | ID=Msa0321060-mRNA-1:exon:8070;Parent=Msa0321060-mRNA-1 |
| chr2_4 | exon | 22072071 | 22072165 | 22072071 | ID=Msa0321060-mRNA-1:exon:8069;Parent=Msa0321060-mRNA-1 |
| chr2_4 | five_prime_UTR | 22072122 | 22072165 | 22072122 | ID=Msa0321060-mRNA-1:five_prime_utr;Parent=Msa0321060-mRNA-1 |
| chr2_4 | CDS | 22072071 | 22072121 | 22072071 | ID=Msa0321060-mRNA-1:cds;Parent=Msa0321060-mRNA-1 |
| chr2_4 | CDS | 22071820 | 22071969 | 22071820 | ID=Msa0321060-mRNA-1:cds;Parent=Msa0321060-mRNA-1 |
| chr2_4 | CDS | 22071048 | 22071185 | 22071048 | ID=Msa0321060-mRNA-1:cds;Parent=Msa0321060-mRNA-1 |
| chr2_4 | CDS | 22070825 | 22070950 | 22070825 | ID=Msa0321060-mRNA-1:cds;Parent=Msa0321060-mRNA-1 |
| chr2_4 | CDS | 22070512 | 22070640 | 22070512 | ID=Msa0321060-mRNA-1:cds;Parent=Msa0321060-mRNA-1 |
| chr2_4 | CDS | 22070288 | 22070377 | 22070288 | ID=Msa0321060-mRNA-1:cds;Parent=Msa0321060-mRNA-1 |
| chr2_4 | CDS | 22070043 | 22070193 | 22070043 | ID=Msa0321060-mRNA-1:cds;Parent=Msa0321060-mRNA-1 |
| chr2_4 | CDS | 22069767 | 22069876 | 22069767 | ID=Msa0321060-mRNA-1:cds;Parent=Msa0321060-mRNA-1 |
| chr2_4 | CDS | 22068358 | 22068429 | 22068358 | ID=Msa0321060-mRNA-1:cds;Parent=Msa0321060-mRNA-1 |
| chr2_4 | CDS | 22067838 | 22067943 | 22067838 | ID=Msa0321060-mRNA-1:cds;Parent=Msa0321060-mRNA-1 |
| chr2_4 | CDS | 22067541 | 22067738 | 22067541 | ID=Msa0321060-mRNA-1:cds;Parent=Msa0321060-mRNA-1 |
| chr2_4 | CDS | 22067006 | 22067048 | 22067006 | ID=Msa0321060-mRNA-1:cds;Parent=Msa0321060-mRNA-1 |
| chr2_4 | CDS | 22066783 | 22066861 | 22066783 | ID=Msa0321060-mRNA-1:cds;Parent=Msa0321060-mRNA-1 |
| chr2_4 | three_prime_UTR | 22066620 | 22066782 | 22066620 | ID=Msa0321060-mRNA-1:three_prime_utr;Parent=Msa0321060-mRNA-1 |
| Gene Sequence |
| Protein sequence |
