AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0419030


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0419030 MtrunA17_Chr3g0116671 94.257 296 10 2 1 295 1 290 0.0 566
Msa0419030 MtrunA17_Chr4g0006411 37.952 166 97 3 79 243 52 212 7.31e-28 107
Msa0419030 MtrunA17_Chr7g0258361 26.087 161 113 1 84 244 46 200 2.01e-12 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0419030 AT4G24750.1 64.214 299 96 4 1 295 1 292 2.15e-140 397
Msa0419030 AT3G08920.1 38.037 163 95 3 79 240 39 196 3.98e-25 100
Msa0419030 AT2G42220.1 29.496 139 98 0 75 213 39 177 2.70e-17 79.7

Find 124 sgRNAs with CRISPR-Local

Find 264 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGAGCTTCCCATCTCTTTC+TGG 0.133810 3_2:-66980504 None:intergenic
CTTCGTGAATGTTAATATTT+TGG 0.135905 3_2:+66984098 Msa0419030:three_prime_UTR
AACAATTAGTTCTGCATCTT+TGG 0.158493 3_2:-66982021 None:intergenic
GTTGCCGATGCATTATTTAT+TGG 0.202866 3_2:+66983741 Msa0419030:CDS
TTCTGAAATTTATGTTATAA+TGG 0.206894 3_2:+66983969 Msa0419030:three_prime_UTR
TTTATTGGCGCTCAGCAAAT+TGG 0.243390 3_2:+66983756 Msa0419030:CDS
CCGGTTACACAAACCTGTTT+TGG 0.266059 3_2:+66982341 Msa0419030:CDS
ACAATTAGTTCTGCATCTTT+GGG 0.290043 3_2:-66982020 None:intergenic
CCTCTTAAGTTTGCTGGAAT+TGG 0.299694 3_2:+66982537 Msa0419030:CDS
ATGATTAATAATAAGATTAG+AGG 0.305224 3_2:-66980189 None:intergenic
ATGGGCTGTGGTCCTAGTTT+AGG 0.306364 3_2:+66984012 Msa0419030:three_prime_UTR
TGCTGCAGCCAAGGAAGGTT+GGG 0.307164 3_2:+66983593 Msa0419030:CDS
TTACTGCTGTGGATAAATTA+AGG 0.323162 3_2:+66984197 Msa0419030:three_prime_UTR
TCTGAAATTTATGTTATAAT+GGG 0.323374 3_2:+66983970 Msa0419030:three_prime_UTR
CCAAAACAGGTTTGTGTAAC+CGG 0.332922 3_2:-66982341 None:intergenic
ATCATAAATCCAAGTTTAGA+TGG 0.340417 3_2:+66983993 Msa0419030:three_prime_UTR
TCAGCGCCTCTTAAGTTTGC+TGG 0.341434 3_2:+66982531 Msa0419030:CDS
GGGTGCATGCTTGCTTAGTT+AGG 0.349047 3_2:+66980126 Msa0419030:five_prime_UTR
GAGCTCACCTCAGTCCCTTC+TGG 0.353437 3_2:-66982049 None:intergenic
AGAAATTCAGAAAACTGAAA+TGG 0.360363 3_2:-66982407 None:intergenic
CCATCATCGACATTGAATAT+TGG 0.361064 3_2:-66981712 None:intergenic
GGGAACTTCTCCGCAACTTT+GGG 0.366253 3_2:-66981999 None:intergenic
GCAAATTGGGCGCTATCTTC+AGG 0.376324 3_2:+66983770 Msa0419030:CDS
TGCTGGAATTGGTGGTGTTT+CGG 0.379254 3_2:+66982548 Msa0419030:CDS
TATTATCACATACAAGAGTT+TGG 0.382772 3_2:-66984072 None:intergenic
TAGGACCCATTGAGATACTA+TGG 0.384413 3_2:+66983797 Msa0419030:exon
TTCAACTAGACAGAAGTCTA+TGG 0.385292 3_2:+66980329 Msa0419030:CDS
AATAATAAGATTAGAGGAAA+AGG 0.388195 3_2:-66980183 None:intergenic
TCTAATCTTATTATTAATCA+TGG 0.413903 3_2:+66980191 Msa0419030:exon
GGTGGTGTTTCGGAATTCCT+TGG 0.414207 3_2:+66982558 Msa0419030:CDS
CTTAAGTTTGCTGGAATTGG+TGG 0.419134 3_2:+66982540 Msa0419030:CDS
AACCTTGTTGTGTTCATTTG+AGG 0.419393 3_2:-66981296 None:intergenic
TTATTGGCGCTCAGCAAATT+GGG 0.419491 3_2:+66983757 Msa0419030:CDS
TCTGTATCCCCAACCTTCCT+TGG 0.420887 3_2:-66983601 None:intergenic
GGGGAACTTCTCCGCAACTT+TGG 0.424721 3_2:-66982000 None:intergenic
AGCCTCCTTGAACCCAAAAC+AGG 0.429532 3_2:-66982354 None:intergenic
CTGCTGCAGCCAAGGAAGGT+TGG 0.434380 3_2:+66983592 Msa0419030:CDS
CTGCATATCCAGCTTCCCTT+GGG 0.434527 3_2:-66981237 None:intergenic
GGCGCTATCTTCAGGAGATT+AGG 0.442319 3_2:+66983778 Msa0419030:CDS
AGAAGAAGGACGGTGTTGTA+AGG 0.442401 3_2:-66980307 None:intergenic
GTAGGTGTTGGTGTTGGAAT+TGG 0.442509 3_2:-66980244 None:intergenic
ACTGCATATCCAGCTTCCCT+TGG 0.444447 3_2:-66981238 None:intergenic
ATTGAAGCAAGTCAGGGATA+TGG 0.444913 3_2:+66980475 Msa0419030:CDS
ACCTTGTTGTGTTCATTTGA+GGG 0.445197 3_2:-66981295 None:intergenic
ACAAGCCCCTTCTTGATGTT+CGG 0.445700 3_2:+66981272 Msa0419030:CDS
TTTGAGTTATTGATTTATCC+TGG 0.447854 3_2:+66983825 Msa0419030:three_prime_UTR
GACATTGAATATTGGAATCC+AGG 0.449682 3_2:-66981704 None:intergenic
ATGTAACCATAGTATCTCAA+TGG 0.458243 3_2:-66983803 None:intergenic
GAAATTCAGAAAACTGAAAT+GGG 0.459813 3_2:-66982406 None:intergenic
AGTTTAGAGAATCTAGATGA+TGG 0.461534 3_2:+66980104 Msa0419030:five_prime_UTR
GTTCTTACCCCAAGGGAAGC+TGG 0.464181 3_2:+66981229 Msa0419030:CDS
CCAATTCCAGCAAACTTAAG+AGG 0.465822 3_2:-66982537 None:intergenic
TTAATTTATCCACAGCAGTA+AGG 0.474148 3_2:-66984195 None:intergenic
GTGGTGTTTCGGAATTCCTT+GGG 0.488639 3_2:+66982559 Msa0419030:CDS
GTTTAGAGAATCTAGATGAT+GGG 0.489482 3_2:+66980105 Msa0419030:five_prime_UTR
CAGAAAGAGATGGGAAGCTC+TGG 0.490533 3_2:+66980505 Msa0419030:CDS
ATGAAGTGAGATATCGATAA+GGG 0.490827 3_2:+66980064 None:intergenic
CCAATATTCAATGTCGATGA+TGG 0.493249 3_2:+66981712 Msa0419030:CDS
TGTCAGAGGCTTATTGCCCA+TGG 0.497910 3_2:+66983920 Msa0419030:three_prime_UTR
GTTTAGTTAGATTTACCAGC+AGG 0.505906 3_2:+66983942 Msa0419030:three_prime_UTR
TGTAACCATAGTATCTCAAT+GGG 0.513701 3_2:-66983802 None:intergenic
ACAAAGAGCTGCTGCAGCCA+AGG 0.514373 3_2:+66983584 Msa0419030:CDS
GGAATTGGTAACAGTGATTG+TGG 0.521328 3_2:-66980229 None:intergenic
GACCACAGCCCATCTAAACT+TGG 0.525564 3_2:-66984002 None:intergenic
GGCTGCTGCCAGAAAGAGAT+GGG 0.527321 3_2:+66980496 Msa0419030:CDS
TAATTTATCCACAGCAGTAA+GGG 0.530606 3_2:-66984194 None:intergenic
GAATTGGTAACAGTGATTGT+GGG 0.531813 3_2:-66980228 None:intergenic
CTTTGATGCTGCTGAAGAAG+AGG 0.535812 3_2:+66982375 Msa0419030:CDS
TAGATGTTGGAACCATTCCC+AGG 0.536270 3_2:+66981737 Msa0419030:CDS
GCAACAATATAATCACAGTT+CGG 0.537024 3_2:-66984161 None:intergenic
CACTATTAGTGCATAGCACA+TGG 0.537911 3_2:-66984041 None:intergenic
GGTAACAGTGATTGTGGGAA+GGG 0.538152 3_2:-66980223 None:intergenic
GTGAGATATCGATAAGGGTA+AGG 0.543443 3_2:+66980069 None:intergenic
TGTTATGAACAGGAGGTTGG+TGG 0.549582 3_2:+66981849 Msa0419030:intron
GTCGATGATGGTCTAGATGT+TGG 0.552986 3_2:+66981724 Msa0419030:CDS
ATAAATTAAGGTATTGATGT+GGG 0.553480 3_2:+66984209 Msa0419030:three_prime_UTR
CTAATTGTTGCATGCCAGAA+GGG 0.553912 3_2:+66982035 Msa0419030:CDS
TGGTAACAGTGATTGTGGGA+AGG 0.563931 3_2:-66980224 None:intergenic
TTGAGGGCCGAACATCAAGA+AGG 0.565178 3_2:-66981279 None:intergenic
CAATAAGCCTCTGACAAGGC+CGG 0.565278 3_2:-66983913 None:intergenic
CATGGGTGAAAGGTTCAACC+TGG 0.567974 3_2:+66981686 Msa0419030:CDS
TTCTGTCTAGTTGAAGAAGA+AGG 0.568939 3_2:-66980321 None:intergenic
AGAGCTGCTGCAGCCAAGGA+AGG 0.571203 3_2:+66983588 Msa0419030:CDS
CAATTAGTTCTGCATCTTTG+GGG 0.572471 3_2:-66982019 None:intergenic
AGCGCCAATAAATAATGCAT+CGG 0.573957 3_2:-66983745 None:intergenic
TGAACAGGAGGTTGGTGGAG+TGG 0.574736 3_2:+66981854 Msa0419030:intron
AGAAATGTAGGTGTTGGTGT+TGG 0.575274 3_2:-66980250 None:intergenic
AAATTTCAGAAAGCACCTGC+TGG 0.575966 3_2:-66983957 None:intergenic
ATCCAAGTTTAGATGGGCTG+TGG 0.576133 3_2:+66984000 Msa0419030:three_prime_UTR
TTGAATGCCGGCCTTGTCAG+AGG 0.576951 3_2:+66983906 Msa0419030:three_prime_UTR
ACTTAGAGAAATGTAGGTGT+TGG 0.580172 3_2:-66980256 None:intergenic
AAATTAAGGTTCTTACCCCA+AGG 0.581254 3_2:+66981221 Msa0419030:CDS
TGAGGGCCGAACATCAAGAA+GGG 0.582614 3_2:-66981278 None:intergenic
TCATAAATCCAAGTTTAGAT+GGG 0.585669 3_2:+66983994 Msa0419030:three_prime_UTR
ACTAATTGTTGCATGCCAGA+AGG 0.587081 3_2:+66982034 Msa0419030:CDS
CAAGGAACATTGTCTACACC+AGG 0.587972 3_2:-66983843 None:intergenic
TGGTAAATCTAACTAAACCA+TGG 0.589943 3_2:-66983937 None:intergenic
AGCGGCACTTAGAGAAATGT+AGG 0.593525 3_2:-66980262 None:intergenic
ACATGGAAGAAACCTAAACT+AGG 0.593770 3_2:-66984024 None:intergenic
GCTGCAGCCAAGGAAGGTTG+GGG 0.594915 3_2:+66983594 Msa0419030:CDS
AATTAAGGTTCTTACCCCAA+GGG 0.596376 3_2:+66981222 Msa0419030:CDS
GAAAAGGAAGAAACAAGATG+AGG 0.597715 3_2:-66980167 None:intergenic
TGGCTGCTGCCAGAAAGAGA+TGG 0.598638 3_2:+66980495 Msa0419030:CDS
GAGCAGGATCTTGTCGTGGA+GGG 0.602986 3_2:+66982507 Msa0419030:intron
TGATGTTATGAACAGGAGGT+TGG 0.608404 3_2:+66981846 Msa0419030:intron
TGTGAACTACTATATAATGC+CGG 0.608880 3_2:+66982322 Msa0419030:CDS
GGTAAATCTAACTAAACCAT+GGG 0.613559 3_2:-66983936 None:intergenic
AACAGAAACCCTTACTGCTG+TGG 0.616231 3_2:+66984186 Msa0419030:three_prime_UTR
GGAGCAGGATCTTGTCGTGG+AGG 0.618802 3_2:+66982506 Msa0419030:intron
CTCGTTCTTACCCAAAGTTG+CGG 0.625365 3_2:+66981989 Msa0419030:CDS
GAGGGCCGAACATCAAGAAG+GGG 0.626090 3_2:-66981277 None:intergenic
TTTAGAGAATCTAGATGATG+GGG 0.634601 3_2:+66980106 Msa0419030:five_prime_UTR
GTCTAGTTGAAGAAGAAGGA+CGG 0.638770 3_2:-66980317 None:intergenic
GCCCTCAAATGAACACAACA+AGG 0.642119 3_2:+66981294 Msa0419030:CDS
GATAAATTAAGGTATTGATG+TGG 0.646726 3_2:+66984208 Msa0419030:three_prime_UTR
AAAATAGAGACAACTAGCTG+AGG 0.648475 3_2:+66983874 Msa0419030:three_prime_UTR
GAGTGAGGCATAATTAGTAG+CGG 0.656820 3_2:-66980280 None:intergenic
TGCATATCCAGCTTCCCTTG+GGG 0.664362 3_2:-66981236 None:intergenic
GTGTTGTAAGGAAGAGAGTG+AGG 0.671205 3_2:-66980295 None:intergenic
TGGGCAATAAGCCTCTGACA+AGG 0.671637 3_2:-66983917 None:intergenic
GGTGTAGACAATGTTCCTTG+TGG 0.677524 3_2:+66983846 Msa0419030:three_prime_UTR
TGTGGAGCAGGATCTTGTCG+TGG 0.697794 3_2:+66982503 Msa0419030:intron
TTGCATGCCAGAAGGGACTG+AGG 0.715447 3_2:+66982042 Msa0419030:CDS
TACTTGTCAAAAGACAGTGT+AGG 0.751162 3_2:-66981881 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGATTAATAATAAGATTAG+AGG - chr3_2:66980192-66980211 None:intergenic 15.0%
!! TCTAATCTTATTATTAATCA+TGG + chr3_2:66980191-66980210 Msa0419030:exon 15.0%
!!! TTTTAAACATCTTATTGTTA+TGG + chr3_2:66981430-66981449 Msa0419030:intron 15.0%
!! TTAATAGAATCAAATGTATA+AGG - chr3_2:66981538-66981557 None:intergenic 15.0%
!!! CATTTCATTTTTTAAATCTT+TGG + chr3_2:66982183-66982202 Msa0419030:intron 15.0%
!!! AAAATTACTTTATTGTTGTT+TGG + chr3_2:66982840-66982859 Msa0419030:intron 15.0%
!!! AAATTACTTTATTGTTGTTT+GGG + chr3_2:66982841-66982860 Msa0419030:intron 15.0%
!! AAAAAAAAAAAAATCACCAT+GGG - chr3_2:66982915-66982934 None:intergenic 15.0%
!! AAAAAAAAAAAAAATCACCA+TGG - chr3_2:66982916-66982935 None:intergenic 15.0%
!! ATGTTAATAACTATCAATTT+GGG + chr3_2:66983031-66983050 Msa0419030:intron 15.0%
!!! TTCTGAAATTTATGTTATAA+TGG + chr3_2:66983969-66983988 Msa0419030:three_prime_UTR 15.0%
!!! TCTGAAATTTATGTTATAAT+GGG + chr3_2:66983970-66983989 Msa0419030:three_prime_UTR 15.0%
!! AATAATAAGATTAGAGGAAA+AGG - chr3_2:66980186-66980205 None:intergenic 20.0%
!! AGACAAATATTAGAAATTAG+TGG + chr3_2:66980959-66980978 Msa0419030:intron 20.0%
!!! AATCTAATAGTGTTTGTTAT+TGG + chr3_2:66981087-66981106 Msa0419030:intron 20.0%
!!! AAAATCACAAATTTTGCTAT+GGG + chr3_2:66981760-66981779 Msa0419030:CDS 20.0%
!! TATAAATGTAATGAAAGAGT+CGG - chr3_2:66981802-66981821 None:intergenic 20.0%
!!! CAATTACCAAATACATTTTA+AGG - chr3_2:66982133-66982152 None:intergenic 20.0%
!!! CTTAAAATGTATTTGGTAAT+TGG + chr3_2:66982131-66982150 Msa0419030:intron 20.0%
!! GAAAATAAAAATAACTTCTC+TGG + chr3_2:66982457-66982476 Msa0419030:intron 20.0%
!! ATATTGTAGCATTAGAAATT+AGG - chr3_2:66982616-66982635 None:intergenic 20.0%
!! TATCATGATGAATTCTAATT+TGG + chr3_2:66982633-66982652 Msa0419030:intron 20.0%
!!! AATTACTTTATTGTTGTTTG+GGG + chr3_2:66982842-66982861 Msa0419030:intron 20.0%
!!! ATCTTTATTTTTTCATATGC+TGG + chr3_2:66982961-66982980 Msa0419030:intron 20.0%
!! TAAACAATTTCAATGACAAA+AGG + chr3_2:66983000-66983019 Msa0419030:intron 20.0%
!! AAACAATTTCAATGACAAAA+GGG + chr3_2:66983001-66983020 Msa0419030:intron 20.0%
!! GATGTTAATAACTATCAATT+TGG + chr3_2:66983030-66983049 Msa0419030:intron 20.0%
!!! TTACTAATCAATTTTGAGAT+CGG + chr3_2:66983142-66983161 Msa0419030:intron 20.0%
!!! TCAGAACAATTTTAAAAGTT+TGG + chr3_2:66983520-66983539 Msa0419030:intron 20.0%
!!! ATAAATTAAGGTATTGATGT+GGG + chr3_2:66984209-66984228 Msa0419030:three_prime_UTR 20.0%
! AGAAAATGAAATGCTAGTTA+TGG + chr3_2:66980716-66980735 Msa0419030:intron 25.0%
! ATTCAATTCAACCAAAAACT+AGG - chr3_2:66980846-66980865 None:intergenic 25.0%
! TTCTTATCCTAGATATTTGT+TGG + chr3_2:66980867-66980886 Msa0419030:intron 25.0%
! TATATCACCAACAAATATCT+AGG - chr3_2:66980877-66980896 None:intergenic 25.0%
!!! TGTTGGTGATATAGATTATT+TGG + chr3_2:66980884-66980903 Msa0419030:intron 25.0%
!!! GTTGGTGATATAGATTATTT+GGG + chr3_2:66980885-66980904 Msa0419030:intron 25.0%
!!! TTTGGATGACTGTATTTTAA+TGG + chr3_2:66981161-66981180 Msa0419030:intron 25.0%
!!! TTGGATGACTGTATTTTAAT+GGG + chr3_2:66981162-66981181 Msa0419030:intron 25.0%
!! GAAAATCACAAATTTTGCTA+TGG + chr3_2:66981759-66981778 Msa0419030:CDS 25.0%
!!! CCAAATACATTTTAAGGAAA+TGG - chr3_2:66982127-66982146 None:intergenic 25.0%
! CCATTTCCTTAAAATGTATT+TGG + chr3_2:66982124-66982143 Msa0419030:intron 25.0%
! TTGGTTCAATCAAATTATTG+TGG + chr3_2:66982202-66982221 Msa0419030:intron 25.0%
!! ACTTGTTAAATGATTAGAGA+TGG - chr3_2:66982233-66982252 None:intergenic 25.0%
! TAAGGTTTACATTGTCTATT+TGG - chr3_2:66982261-66982280 None:intergenic 25.0%
! GAAATTCAGAAAACTGAAAT+GGG - chr3_2:66982409-66982428 None:intergenic 25.0%
! AGAAATTCAGAAAACTGAAA+TGG - chr3_2:66982410-66982429 None:intergenic 25.0%
! GCTGTACTCTAATTAAATTT+AGG + chr3_2:66982435-66982454 Msa0419030:intron 25.0%
! ATACTTCTCACAAGTTTAAT+TGG + chr3_2:66982788-66982807 Msa0419030:intron 25.0%
!!! TTTATTTTTTCCTAGATCGA+CGG + chr3_2:66983060-66983079 Msa0419030:intron 25.0%
! TTAAGTTTGTGCAATTACAA+TGG - chr3_2:66983428-66983447 None:intergenic 25.0%
! CATACAATAGATTAATTACC+AGG - chr3_2:66983644-66983663 None:intergenic 25.0%
! TTTGACATCACAAATTTGAA+TGG + chr3_2:66983692-66983711 Msa0419030:intron 25.0%
!!! TTTGAGTTATTGATTTATCC+TGG + chr3_2:66983825-66983844 Msa0419030:three_prime_UTR 25.0%
! ATCATAAATCCAAGTTTAGA+TGG + chr3_2:66983993-66984012 Msa0419030:three_prime_UTR 25.0%
! TCATAAATCCAAGTTTAGAT+GGG + chr3_2:66983994-66984013 Msa0419030:three_prime_UTR 25.0%
!!! TATGCACTAATAGTGTTTTT+TGG + chr3_2:66984049-66984068 Msa0419030:three_prime_UTR 25.0%
! TATTATCACATACAAGAGTT+TGG - chr3_2:66984075-66984094 None:intergenic 25.0%
!! CTTCGTGAATGTTAATATTT+TGG + chr3_2:66984098-66984117 Msa0419030:three_prime_UTR 25.0%
!!! GATAAATTAAGGTATTGATG+TGG + chr3_2:66984208-66984227 Msa0419030:three_prime_UTR 25.0%
AGTTTAGAGAATCTAGATGA+TGG + chr3_2:66980104-66980123 Msa0419030:five_prime_UTR 30.0%
GTTTAGAGAATCTAGATGAT+GGG + chr3_2:66980105-66980124 Msa0419030:five_prime_UTR 30.0%
TTTAGAGAATCTAGATGATG+GGG + chr3_2:66980106-66980125 Msa0419030:five_prime_UTR 30.0%
! ATTTTGAATTGAAGCAAGTC+AGG + chr3_2:66980468-66980487 Msa0419030:CDS 30.0%
! TTTTGAATTGAAGCAAGTCA+GGG + chr3_2:66980469-66980488 Msa0419030:CDS 30.0%
AAGAAACGAAAATCTTCACT+TGG - chr3_2:66980626-66980645 None:intergenic 30.0%
! ATGTGTTTTCACAGAGTAAA+TGG + chr3_2:66980818-66980837 Msa0419030:intron 30.0%
! GATTATTTGGGATTTCTCAA+AGG + chr3_2:66980897-66980916 Msa0419030:intron 30.0%
!!! TTGAAGGAGTTTTAAGCAAT+AGG - chr3_2:66981014-66981033 None:intergenic 30.0%
!!! TGGATGACTGTATTTTAATG+GGG + chr3_2:66981163-66981182 Msa0419030:intron 30.0%
TATGTGCAAGTGCAATATAT+TGG - chr3_2:66981359-66981378 None:intergenic 30.0%
TTTAGTTAGTTACCTCTAGT+AGG + chr3_2:66981382-66981401 Msa0419030:intron 30.0%
AACATCTTATTGTTATGGTC+AGG + chr3_2:66981435-66981454 Msa0419030:intron 30.0%
AAGATCACAACAATAATGTG+TGG - chr3_2:66981638-66981657 None:intergenic 30.0%
! GCAAAATTTGTGATTTTCCT+GGG - chr3_2:66981757-66981776 None:intergenic 30.0%
! AGCAAAATTTGTGATTTTCC+TGG - chr3_2:66981758-66981777 None:intergenic 30.0%
!! TTTGACTTGATGTTATGAAC+AGG + chr3_2:66981839-66981858 Msa0419030:intron 30.0%
!! ACAATTAGTTCTGCATCTTT+GGG - chr3_2:66982023-66982042 None:intergenic 30.0%
!! AACAATTAGTTCTGCATCTT+TGG - chr3_2:66982024-66982043 None:intergenic 30.0%
AAATGTGACTCAAAACACAA+GGG - chr3_2:66982168-66982187 None:intergenic 30.0%
TGTGAACTACTATATAATGC+CGG + chr3_2:66982322-66982341 Msa0419030:CDS 30.0%
AAATTAGGAAGTAAGGTTAG+AGG - chr3_2:66982601-66982620 None:intergenic 30.0%
GCATTAGAAATTAGGAAGTA+AGG - chr3_2:66982608-66982627 None:intergenic 30.0%
TTAGTTTAAGAGTTCTCTGA+TGG + chr3_2:66982660-66982679 Msa0419030:intron 30.0%
! AGAAGTATAATGTTCTAGTG+TGG - chr3_2:66982776-66982795 None:intergenic 30.0%
TTCTCACAAGTTTAATTGGT+TGG + chr3_2:66982792-66982811 Msa0419030:intron 30.0%
! TAGCATGTAGTTTCATCTTT+TGG - chr3_2:66983120-66983139 None:intergenic 30.0%
AACTGCAATTCTTATGTCAT+TGG + chr3_2:66983200-66983219 Msa0419030:intron 30.0%
ACTGCAATTCTTATGTCATT+GGG + chr3_2:66983201-66983220 Msa0419030:intron 30.0%
! AATCTGGAATACATAACACA+TGG - chr3_2:66983241-66983260 None:intergenic 30.0%
GATCGTTTATCATGAATTCA+TGG - chr3_2:66983265-66983284 None:intergenic 30.0%
ACTGCAATATTATTTCCAGT+TGG + chr3_2:66983553-66983572 Msa0419030:intron 30.0%
TGTAACCATAGTATCTCAAT+GGG - chr3_2:66983805-66983824 None:intergenic 30.0%
ATGTAACCATAGTATCTCAA+TGG - chr3_2:66983806-66983825 None:intergenic 30.0%
GGTAAATCTAACTAAACCAT+GGG - chr3_2:66983939-66983958 None:intergenic 30.0%
TGGTAAATCTAACTAAACCA+TGG - chr3_2:66983940-66983959 None:intergenic 30.0%
GCAACAATATAATCACAGTT+CGG - chr3_2:66984164-66984183 None:intergenic 30.0%
TAATTTATCCACAGCAGTAA+GGG - chr3_2:66984197-66984216 None:intergenic 30.0%
TTAATTTATCCACAGCAGTA+AGG - chr3_2:66984198-66984217 None:intergenic 30.0%
TTACTGCTGTGGATAAATTA+AGG + chr3_2:66984197-66984216 Msa0419030:three_prime_UTR 30.0%
GAAAAGGAAGAAACAAGATG+AGG - chr3_2:66980170-66980189 None:intergenic 35.0%
! GAATTGGTAACAGTGATTGT+GGG - chr3_2:66980231-66980250 None:intergenic 35.0%
ACTTAGAGAAATGTAGGTGT+TGG - chr3_2:66980259-66980278 None:intergenic 35.0%
TTCTGTCTAGTTGAAGAAGA+AGG - chr3_2:66980324-66980343 None:intergenic 35.0%
TTCAACTAGACAGAAGTCTA+TGG + chr3_2:66980329-66980348 Msa0419030:CDS 35.0%
ACAACATTCTTCTTCTGCAA+AGG - chr3_2:66980425-66980444 None:intergenic 35.0%
! TCATTTTCTCTCGACCATAA+TGG - chr3_2:66980705-66980724 None:intergenic 35.0%
!! AGTAAATGGAGCCTAGTTTT+TGG + chr3_2:66980832-66980851 Msa0419030:intron 35.0%
ATTCGATCCAGAAACTAACA+TGG - chr3_2:66980985-66981004 None:intergenic 35.0%
! TTAGTTTCTGGATCGAATCT+GGG + chr3_2:66980987-66981006 Msa0419030:intron 35.0%
!!! GGATGACTGTATTTTAATGG+GGG + chr3_2:66981164-66981183 Msa0419030:intron 35.0%
GCTCAGGGATGAAAAAATTA+AGG + chr3_2:66981207-66981226 Msa0419030:intron 35.0%
AAATTAAGGTTCTTACCCCA+AGG + chr3_2:66981221-66981240 Msa0419030:CDS 35.0%
AATTAAGGTTCTTACCCCAA+GGG + chr3_2:66981222-66981241 Msa0419030:CDS 35.0%
! ACCTTGTTGTGTTCATTTGA+GGG - chr3_2:66981298-66981317 None:intergenic 35.0%
! AACCTTGTTGTGTTCATTTG+AGG - chr3_2:66981299-66981318 None:intergenic 35.0%
!! GCTCTTTTTGCATGTTTTGA+AGG + chr3_2:66981663-66981682 Msa0419030:intron 35.0%
!!! TTTTGCATGTTTTGAAGGCA+TGG + chr3_2:66981668-66981687 Msa0419030:intron 35.0%
!!! TTTGCATGTTTTGAAGGCAT+GGG + chr3_2:66981669-66981688 Msa0419030:intron 35.0%
GACATTGAATATTGGAATCC+AGG - chr3_2:66981707-66981726 None:intergenic 35.0%
CCATCATCGACATTGAATAT+TGG - chr3_2:66981715-66981734 None:intergenic 35.0%
CCAATATTCAATGTCGATGA+TGG + chr3_2:66981712-66981731 Msa0419030:CDS 35.0%
! ATTTGTGATTTTCCTGGGAA+TGG - chr3_2:66981752-66981771 None:intergenic 35.0%
TACTTGTCAAAAGACAGTGT+AGG - chr3_2:66981884-66981903 None:intergenic 35.0%
!! CAATTAGTTCTGCATCTTTG+GGG - chr3_2:66982022-66982041 None:intergenic 35.0%
GTGAGCTCTATACATTCAAT+AGG + chr3_2:66982064-66982083 Msa0419030:intron 35.0%
AATGTGACTCAAAACACAAG+GGG - chr3_2:66982167-66982186 None:intergenic 35.0%
GAAATGTGACTCAAAACACA+AGG - chr3_2:66982169-66982188 None:intergenic 35.0%
ATCAGGTTCAGAACAACATA+AGG - chr3_2:66982279-66982298 None:intergenic 35.0%
! TTAATCCTTTTGGTCTGTTG+TGG + chr3_2:66982485-66982504 Msa0419030:intron 35.0%
CAATTTCAATGACAAAAGGG+AGG + chr3_2:66983004-66983023 Msa0419030:intron 35.0%
! ATGTAGTTTCATCTTTTGGC+AGG - chr3_2:66983116-66983135 None:intergenic 35.0%
ATCATGAATTCATGGCAATC+TGG - chr3_2:66983257-66983276 None:intergenic 35.0%
GAAGAATGTTCATAGATCGT+TGG + chr3_2:66983402-66983421 Msa0419030:intron 35.0%
! TCTTTTTGCTTACGATATGC+AGG + chr3_2:66983466-66983485 Msa0419030:intron 35.0%
! GGGATACAGATTAGTGTTTT+CGG + chr3_2:66983614-66983633 Msa0419030:CDS 35.0%
TGAATGGTTATTGCGTAGAT+TGG + chr3_2:66983708-66983727 Msa0419030:intron 35.0%
GTTGCCGATGCATTATTTAT+TGG + chr3_2:66983741-66983760 Msa0419030:CDS 35.0%
AGCGCCAATAAATAATGCAT+CGG - chr3_2:66983748-66983767 None:intergenic 35.0%
! TCTCTATTTTCTCATCCACA+AGG - chr3_2:66983864-66983883 None:intergenic 35.0%
AAAATAGAGACAACTAGCTG+AGG + chr3_2:66983874-66983893 Msa0419030:three_prime_UTR 35.0%
! AGGAACTCAATTTTGAATGC+CGG + chr3_2:66983894-66983913 Msa0419030:three_prime_UTR 35.0%
GTTTAGTTAGATTTACCAGC+AGG + chr3_2:66983942-66983961 Msa0419030:three_prime_UTR 35.0%
ACATGGAAGAAACCTAAACT+AGG - chr3_2:66984027-66984046 None:intergenic 35.0%
! GGAATTGGTAACAGTGATTG+TGG - chr3_2:66980232-66980251 None:intergenic 40.0%
!! AGAAATGTAGGTGTTGGTGT+TGG - chr3_2:66980253-66980272 None:intergenic 40.0%
GAGTGAGGCATAATTAGTAG+CGG - chr3_2:66980283-66980302 None:intergenic 40.0%
GTCTAGTTGAAGAAGAAGGA+CGG - chr3_2:66980320-66980339 None:intergenic 40.0%
ACTAGACAGAAGTCTATGGT+TGG + chr3_2:66980333-66980352 Msa0419030:intron 40.0%
ATTGAAGCAAGTCAGGGATA+TGG + chr3_2:66980475-66980494 Msa0419030:CDS 40.0%
ACTCTTGAAGCGAACCATTA+TGG + chr3_2:66980688-66980707 Msa0419030:intron 40.0%
TTGGGATTTCTCAAAGGCTT+TGG + chr3_2:66980903-66980922 Msa0419030:intron 40.0%
TGGGATTTCTCAAAGGCTTT+GGG + chr3_2:66980904-66980923 Msa0419030:intron 40.0%
! TTAGTGGCCATGTTAGTTTC+TGG + chr3_2:66980975-66980994 Msa0419030:intron 40.0%
! GTTAGTTTCTGGATCGAATC+TGG + chr3_2:66980986-66981005 Msa0419030:intron 40.0%
GGTAAGGTAAGAGACATTGA+AGG - chr3_2:66981030-66981049 None:intergenic 40.0%
!! GCTCTTGCTTTTGTTTACCT+TGG + chr3_2:66981333-66981352 Msa0419030:intron 40.0%
CAAGTGCAATATATTGGCCA+AGG - chr3_2:66981353-66981372 None:intergenic 40.0%
AGTTAGTTACCTCTAGTAGG+AGG + chr3_2:66981385-66981404 Msa0419030:intron 40.0%
CTGTCATGAGTGATTGATCT+TGG + chr3_2:66981473-66981492 Msa0419030:intron 40.0%
GCTTTCAACAGTTACTACCA+AGG - chr3_2:66981500-66981519 None:intergenic 40.0%
GACTTGATGTTATGAACAGG+AGG + chr3_2:66981842-66981861 Msa0419030:intron 40.0%
TGATGTTATGAACAGGAGGT+TGG + chr3_2:66981846-66981865 Msa0419030:intron 40.0%
ACTAATTGTTGCATGCCAGA+AGG + chr3_2:66982034-66982053 Msa0419030:CDS 40.0%
CTAATTGTTGCATGCCAGAA+GGG + chr3_2:66982035-66982054 Msa0419030:CDS 40.0%
! GTTGTTCTGAACCTGATTGT+TGG + chr3_2:66982282-66982301 Msa0419030:intron 40.0%
TAATGATCTGGCCAACAATC+AGG - chr3_2:66982296-66982315 None:intergenic 40.0%
TTCACAAGCAGCTAATGATC+TGG - chr3_2:66982308-66982327 None:intergenic 40.0%
CCAAAACAGGTTTGTGTAAC+CGG - chr3_2:66982344-66982363 None:intergenic 40.0%
! CGGTTACACAAACCTGTTTT+GGG + chr3_2:66982342-66982361 Msa0419030:CDS 40.0%
!!! ACAAACCTGTTTTGGGTTCA+AGG + chr3_2:66982349-66982368 Msa0419030:CDS 40.0%
! TCTGGTGAGCTTAATCCTTT+TGG + chr3_2:66982475-66982494 Msa0419030:intron 40.0%
CCAATTCCAGCAAACTTAAG+AGG - chr3_2:66982540-66982559 None:intergenic 40.0%
!! CCTCTTAAGTTTGCTGGAAT+TGG + chr3_2:66982537-66982556 Msa0419030:CDS 40.0%
!! CTTAAGTTTGCTGGAATTGG+TGG + chr3_2:66982540-66982559 Msa0419030:CDS 40.0%
TGAGATTAGATAGCTACCCA+AGG - chr3_2:66982578-66982597 None:intergenic 40.0%
TAATGTTCTAGTGTGGCAAC+TGG - chr3_2:66982769-66982788 None:intergenic 40.0%
!! CTTTATTGTTGTTTGGGGCA+TGG + chr3_2:66982847-66982866 Msa0419030:intron 40.0%
TCTTTGTTGATCAGTCCAAC+TGG - chr3_2:66983571-66983590 None:intergenic 40.0%
TTTATTGGCGCTCAGCAAAT+TGG + chr3_2:66983756-66983775 Msa0419030:CDS 40.0%
TTATTGGCGCTCAGCAAATT+GGG + chr3_2:66983757-66983776 Msa0419030:CDS 40.0%
TAGGACCCATTGAGATACTA+TGG + chr3_2:66983797-66983816 Msa0419030:exon 40.0%
!! AAATTTCAGAAAGCACCTGC+TGG - chr3_2:66983960-66983979 None:intergenic 40.0%
CACTATTAGTGCATAGCACA+TGG - chr3_2:66984044-66984063 None:intergenic 40.0%
GGTAACAGTGATTGTGGGAA+GGG - chr3_2:66980226-66980245 None:intergenic 45.0%
TGGTAACAGTGATTGTGGGA+AGG - chr3_2:66980227-66980246 None:intergenic 45.0%
!! GTAGGTGTTGGTGTTGGAAT+TGG - chr3_2:66980247-66980266 None:intergenic 45.0%
AGCGGCACTTAGAGAAATGT+AGG - chr3_2:66980265-66980284 None:intergenic 45.0%
GTGTTGTAAGGAAGAGAGTG+AGG - chr3_2:66980298-66980317 None:intergenic 45.0%
!! AGAAGAAGGACGGTGTTGTA+AGG - chr3_2:66980310-66980329 None:intergenic 45.0%
AGTTTACTAAAGAGCCGCGT+AGG - chr3_2:66981063-66981082 None:intergenic 45.0%
! CTGCGATCTTCTTTTGCGTT+TGG + chr3_2:66981143-66981162 Msa0419030:intron 45.0%
CGTGTTTGCTTTGTAGCTCA+GGG + chr3_2:66981192-66981211 Msa0419030:intron 45.0%
ACAAGCCCCTTCTTGATGTT+CGG + chr3_2:66981272-66981291 Msa0419030:CDS 45.0%
GCCCTCAAATGAACACAACA+AGG + chr3_2:66981294-66981313 Msa0419030:CDS 45.0%
AAAAGCAAGAGCTGCGTCAT+AGG - chr3_2:66981325-66981344 None:intergenic 45.0%
TAGTAGGAGGTGACAAGGAA+AGG + chr3_2:66981398-66981417 Msa0419030:intron 45.0%
GAGTGATTGATCTTGGACCT+TGG + chr3_2:66981480-66981499 Msa0419030:intron 45.0%
!!! GTTTTGAAGGCATGGGTGAA+AGG + chr3_2:66981676-66981695 Msa0419030:intron 45.0%
! GTCGATGATGGTCTAGATGT+TGG + chr3_2:66981724-66981743 Msa0419030:CDS 45.0%
TAGATGTTGGAACCATTCCC+AGG + chr3_2:66981737-66981756 Msa0419030:CDS 45.0%
TGTTATGAACAGGAGGTTGG+TGG + chr3_2:66981849-66981868 Msa0419030:intron 45.0%
CTCGTTCTTACCCAAAGTTG+CGG + chr3_2:66981989-66982008 Msa0419030:CDS 45.0%
! CCGGTTACACAAACCTGTTT+TGG + chr3_2:66982341-66982360 Msa0419030:CDS 45.0%
!!! AACCTGTTTTGGGTTCAAGG+AGG + chr3_2:66982352-66982371 Msa0419030:CDS 45.0%
CTTTGATGCTGCTGAAGAAG+AGG + chr3_2:66982375-66982394 Msa0419030:CDS 45.0%
!! TGCTGGAATTGGTGGTGTTT+CGG + chr3_2:66982548-66982567 Msa0419030:CDS 45.0%
GTGGTGTTTCGGAATTCCTT+GGG + chr3_2:66982559-66982578 Msa0419030:CDS 45.0%
TGATGCATGTTGAAGACCCA+TGG + chr3_2:66982896-66982915 Msa0419030:intron 45.0%
AATAGACTGTCCGTCGATCT+AGG - chr3_2:66983073-66983092 None:intergenic 45.0%
TAGATCGACGGACAGTCTAT+TGG + chr3_2:66983072-66983091 Msa0419030:intron 45.0%
CAAGGAACATTGTCTACACC+AGG - chr3_2:66983846-66983865 None:intergenic 45.0%
GGTGTAGACAATGTTCCTTG+TGG + chr3_2:66983846-66983865 Msa0419030:three_prime_UTR 45.0%
!! ATCCAAGTTTAGATGGGCTG+TGG + chr3_2:66984000-66984019 Msa0419030:three_prime_UTR 45.0%
AACAGAAACCCTTACTGCTG+TGG + chr3_2:66984186-66984205 Msa0419030:three_prime_UTR 45.0%
GGGTGCATGCTTGCTTAGTT+AGG + chr3_2:66980126-66980145 Msa0419030:five_prime_UTR 50.0%
CAGAGCTTCCCATCTCTTTC+TGG - chr3_2:66980507-66980526 None:intergenic 50.0%
CAGAAAGAGATGGGAAGCTC+TGG + chr3_2:66980505-66980524 Msa0419030:CDS 50.0%
GCGTGTTTGCTTTGTAGCTC+AGG + chr3_2:66981191-66981210 Msa0419030:intron 50.0%
TGCATATCCAGCTTCCCTTG+GGG - chr3_2:66981239-66981258 None:intergenic 50.0%
CTGCATATCCAGCTTCCCTT+GGG - chr3_2:66981240-66981259 None:intergenic 50.0%
ACTGCATATCCAGCTTCCCT+TGG - chr3_2:66981241-66981260 None:intergenic 50.0%
TGAGGGCCGAACATCAAGAA+GGG - chr3_2:66981281-66981300 None:intergenic 50.0%
TTGAGGGCCGAACATCAAGA+AGG - chr3_2:66981282-66981301 None:intergenic 50.0%
ACCTCTAGTAGGAGGTGACA+AGG + chr3_2:66981393-66981412 Msa0419030:intron 50.0%
TCCTTGTCACCTCCTACTAG+AGG - chr3_2:66981397-66981416 None:intergenic 50.0%
CATGGGTGAAAGGTTCAACC+TGG + chr3_2:66981686-66981705 Msa0419030:CDS 50.0%
GGGAACTTCTCCGCAACTTT+GGG - chr3_2:66982002-66982021 None:intergenic 50.0%
AGCCTCCTTGAACCCAAAAC+AGG - chr3_2:66982357-66982376 None:intergenic 50.0%
CTGCTCCACAACAGACCAAA+AGG - chr3_2:66982493-66982512 None:intergenic 50.0%
! CTTTTGGTCTGTTGTGGAGC+AGG + chr3_2:66982491-66982510 Msa0419030:intron 50.0%
TCAGCGCCTCTTAAGTTTGC+TGG + chr3_2:66982531-66982550 Msa0419030:CDS 50.0%
GGTGGTGTTTCGGAATTCCT+TGG + chr3_2:66982558-66982577 Msa0419030:CDS 50.0%
TTGGGGCATGGTATAGTGCA+TGG + chr3_2:66982859-66982878 Msa0419030:intron 50.0%
TGGGGCATGGTATAGTGCAT+GGG + chr3_2:66982860-66982879 Msa0419030:intron 50.0%
TCTGTATCCCCAACCTTCCT+TGG - chr3_2:66983604-66983623 None:intergenic 50.0%
! ATTAGTGTTTTCGGCACGCC+TGG + chr3_2:66983623-66983642 Msa0419030:CDS 50.0%
GCAAATTGGGCGCTATCTTC+AGG + chr3_2:66983770-66983789 Msa0419030:CDS 50.0%
GGCGCTATCTTCAGGAGATT+AGG + chr3_2:66983778-66983797 Msa0419030:CDS 50.0%
CAATAAGCCTCTGACAAGGC+CGG - chr3_2:66983916-66983935 None:intergenic 50.0%
TGGGCAATAAGCCTCTGACA+AGG - chr3_2:66983920-66983939 None:intergenic 50.0%
TGTCAGAGGCTTATTGCCCA+TGG + chr3_2:66983920-66983939 Msa0419030:three_prime_UTR 50.0%
GACCACAGCCCATCTAAACT+TGG - chr3_2:66984005-66984024 None:intergenic 50.0%
! ATGGGCTGTGGTCCTAGTTT+AGG + chr3_2:66984012-66984031 Msa0419030:three_prime_UTR 50.0%
TGGCTGCTGCCAGAAAGAGA+TGG + chr3_2:66980495-66980514 Msa0419030:CDS 55.0%
GGCTGCTGCCAGAAAGAGAT+GGG + chr3_2:66980496-66980515 Msa0419030:CDS 55.0%
! CGTAGGTAGCTCGGTTGGTA+AGG - chr3_2:66981046-66981065 None:intergenic 55.0%
TACCAACCGAGCTACCTACG+CGG + chr3_2:66981046-66981065 Msa0419030:intron 55.0%
AAAGAGCCGCGTAGGTAGCT+CGG - chr3_2:66981055-66981074 None:intergenic 55.0%
GTTCTTACCCCAAGGGAAGC+TGG + chr3_2:66981229-66981248 Msa0419030:CDS 55.0%
GAGGGCCGAACATCAAGAAG+GGG - chr3_2:66981280-66981299 None:intergenic 55.0%
!! TGAACAGGAGGTTGGTGGAG+TGG + chr3_2:66981854-66981873 Msa0419030:intron 55.0%
GGGGAACTTCTCCGCAACTT+TGG - chr3_2:66982003-66982022 None:intergenic 55.0%
TTGCATGCCAGAAGGGACTG+AGG + chr3_2:66982042-66982061 Msa0419030:CDS 55.0%
TGTGGAGCAGGATCTTGTCG+TGG + chr3_2:66982503-66982522 Msa0419030:intron 55.0%
GAGCAGGATCTTGTCGTGGA+GGG + chr3_2:66982507-66982526 Msa0419030:intron 55.0%
ACAAAGAGCTGCTGCAGCCA+AGG + chr3_2:66983584-66983603 Msa0419030:CDS 55.0%
TGCTGCAGCCAAGGAAGGTT+GGG + chr3_2:66983593-66983612 Msa0419030:CDS 55.0%
! TTGAATGCCGGCCTTGTCAG+AGG + chr3_2:66983906-66983925 Msa0419030:three_prime_UTR 55.0%
GAGCTCACCTCAGTCCCTTC+TGG - chr3_2:66982052-66982071 None:intergenic 60.0%
GGAGCAGGATCTTGTCGTGG+AGG + chr3_2:66982506-66982525 Msa0419030:intron 60.0%
AGAGCTGCTGCAGCCAAGGA+AGG + chr3_2:66983588-66983607 Msa0419030:CDS 60.0%
CTGCTGCAGCCAAGGAAGGT+TGG + chr3_2:66983592-66983611 Msa0419030:CDS 60.0%
GCTGCAGCCAAGGAAGGTTG+GGG + chr3_2:66983594-66983613 Msa0419030:CDS 60.0%
AGCCGCGTAGGTAGCTCGGT+TGG - chr3_2:66981051-66981070 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 66980079 66984247 66980079 ID=Msa0419030;Name=Msa0419030
chr3_2 mRNA 66980079 66984247 66980079 ID=Msa0419030-mRNA-1;Parent=Msa0419030;Name=Msa0419030-mRNA-1;_AED=0.19;_eAED=0.19;_QI=131|0.88|0.9|1|1|1|10|438|295
chr3_2 exon 66980079 66980350 66980079 ID=Msa0419030-mRNA-1:exon:15471;Parent=Msa0419030-mRNA-1
chr3_2 exon 66980431 66980526 66980431 ID=Msa0419030-mRNA-1:exon:15472;Parent=Msa0419030-mRNA-1
chr3_2 exon 66981208 66981315 66981208 ID=Msa0419030-mRNA-1:exon:15473;Parent=Msa0419030-mRNA-1
chr3_2 exon 66981685 66981781 66981685 ID=Msa0419030-mRNA-1:exon:15474;Parent=Msa0419030-mRNA-1
chr3_2 exon 66981861 66981900 66981861 ID=Msa0419030-mRNA-1:exon:15475;Parent=Msa0419030-mRNA-1
chr3_2 exon 66981989 66982063 66981989 ID=Msa0419030-mRNA-1:exon:15476;Parent=Msa0419030-mRNA-1
chr3_2 exon 66982309 66982414 66982309 ID=Msa0419030-mRNA-1:exon:15477;Parent=Msa0419030-mRNA-1
chr3_2 exon 66982513 66982580 66982513 ID=Msa0419030-mRNA-1:exon:15478;Parent=Msa0419030-mRNA-1
chr3_2 exon 66983572 66983644 66983572 ID=Msa0419030-mRNA-1:exon:15479;Parent=Msa0419030-mRNA-1
chr3_2 exon 66983726 66984247 66983726 ID=Msa0419030-mRNA-1:exon:15480;Parent=Msa0419030-mRNA-1
chr3_2 five_prime_UTR 66980079 66980209 66980079 ID=Msa0419030-mRNA-1:five_prime_utr;Parent=Msa0419030-mRNA-1
chr3_2 CDS 66980210 66980350 66980210 ID=Msa0419030-mRNA-1:cds;Parent=Msa0419030-mRNA-1
chr3_2 CDS 66980431 66980526 66980431 ID=Msa0419030-mRNA-1:cds;Parent=Msa0419030-mRNA-1
chr3_2 CDS 66981208 66981315 66981208 ID=Msa0419030-mRNA-1:cds;Parent=Msa0419030-mRNA-1
chr3_2 CDS 66981685 66981781 66981685 ID=Msa0419030-mRNA-1:cds;Parent=Msa0419030-mRNA-1
chr3_2 CDS 66981861 66981900 66981861 ID=Msa0419030-mRNA-1:cds;Parent=Msa0419030-mRNA-1
chr3_2 CDS 66981989 66982063 66981989 ID=Msa0419030-mRNA-1:cds;Parent=Msa0419030-mRNA-1
chr3_2 CDS 66982309 66982414 66982309 ID=Msa0419030-mRNA-1:cds;Parent=Msa0419030-mRNA-1
chr3_2 CDS 66982513 66982580 66982513 ID=Msa0419030-mRNA-1:cds;Parent=Msa0419030-mRNA-1
chr3_2 CDS 66983572 66983644 66983572 ID=Msa0419030-mRNA-1:cds;Parent=Msa0419030-mRNA-1
chr3_2 CDS 66983726 66983809 66983726 ID=Msa0419030-mRNA-1:cds;Parent=Msa0419030-mRNA-1
chr3_2 three_prime_UTR 66983810 66984247 66983810 ID=Msa0419030-mRNA-1:three_prime_utr;Parent=Msa0419030-mRNA-1
Gene Sequence

>Msa0419030

ATGGAAGCACTTTCCCTTCCCACAATCACTGTTACCAATTCCAACACCAACACCTACATTTCTCTAAGTGCCGCTACTAATTATGCCTCACTCTCTTCCTTACAACACCGTCCTTCTTCTTCAACTAGACAGAAGTCTATGAAGAAGAATGTTGTTCGTGTAAAAGCTGAGAATGAAGATTTTGAATTGAAGCAAGTCAGGGATATGGCTGCTGCCAGAAAGAGATGGGAAGCTCTGCTCAGGGATGAAAAAATTAAGGTTCTTACCCCAAGGGAAGCTGGATATGCAGTTCAGCTTTCAAACAAGCCCCTTCTTGATGTTCGGCCCTCAAATGAACACAACAAGGCATGGGTGAAAGGTTCAACCTGGATTCCAATATTCAATGTCGATGATGGTCTAGATGTTGGAACCATTCCCAGGAAAATCACAAATTTTGCTATGGGAGGTTGGTGGAGTGGCATGCCTACACTGTCTTTTGACAACTCGTTCTTACCCAAAGTTGCGGAGAAGTTCCCCAAAGATGCAGAACTAATTGTTGCATGCCAGAAGGGACTGAGATCATTAGCTGCTTGTGAACTACTATATAATGCCGGTTACACAAACCTGTTTTGGGTTCAAGGAGGCTTTGATGCTGCTGAAGAAGAGGCATGTTTTCCCATTTCAGATCTTGTCGTGGAGGGTTCAGCGCCTCTTAAGTTTGCTGGAATTGGTGGTGTTTCGGAATTCCTTGGTTGGACTGATCAACAAAGAGCTGCTGCAGCCAAGGAAGGTTGGGGATACAGATTAGTGTTTTCGGCACGCCTGATTGGAGTATTTCTTGTTGCCGATGCATTATTTATTGGCGCTCAGCAAATTGGGCGCTATCTTCAGGAGATTAGGACCCATTGA

Protein sequence

>Msa0419030

MEALSLPTITVTNSNTNTYISLSAATNYASLSSLQHRPSSSTRQKSMKKNVVRVKAENEDFELKQVRDMAAARKRWEALLRDEKIKVLTPREAGYAVQLSNKPLLDVRPSNEHNKAWVKGSTWIPIFNVDDGLDVGTIPRKITNFAMGGWWSGMPTLSFDNSFLPKVAEKFPKDAELIVACQKGLRSLAACELLYNAGYTNLFWVQGGFDAAEEEACFPISDLVVEGSAPLKFAGIGGVSEFLGWTDQQRAAAAKEGWGYRLVFSARLIGVFLVADALFIGAQQIGRYLQEIRTH*